View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11649_low_10 (Length: 272)
Name: NF11649_low_10
Description: NF11649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11649_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 36884671 - 36884935
Alignment:
| Q |
1 |
ttcagcagaagagacctctatcaccaataggaagnnnnnnngagagcatgattagcattagaaatgaattcacagaaatattaatggcatcctaactcag |
100 |
Q |
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|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884671 |
ttcagcagaagagacctctatcaccaataggaagaaaaaaagatagcatgattagcattagaaatgaattcacagaaatattaatggcatcctaactcag |
36884770 |
T |
|
| Q |
101 |
tgaggtagctagttgattattacacnnnnnnngtgaatttccaatacaatctcaaattcgtattatttttcaagattttatcaaggtcttctcagcaaaa |
200 |
Q |
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|
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
36884771 |
tgaggtagctagttgattattacacaaaaaaagtgaatttcaaatacaatctcaaattcgtattatttttcaagattttatcaaggtcttctcagcaaaa |
36884870 |
T |
|
| Q |
201 |
atgacaaaaacagattatagagtgcctcactatccatatgcttctctgtataaattacctatgct |
265 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
36884871 |
atgacaaaaacagattatagagtgccttactatccatatgcttctctgtataaattacctatgct |
36884935 |
T |
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