View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1164_low_13 (Length: 438)
Name: NF1164_low_13
Description: NF1164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1164_low_13 |
 | |
|
| [»] chr7 (17 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 98 - 438
Target Start/End: Original strand, 22885617 - 22885957
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22885617 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaataccaaaaa |
22885716 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgttagagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22885717 |
catggctgctactgtttccattgttggaattgttagagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaa |
22885816 |
T |
|
| Q |
298 |
ttccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactgagtgtttttgaaaactatag |
397 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22885817 |
ttccatggccactatgagttggatattaagattttatagcaaataaagaattagttgagaaagaagacacactttcactgagtgtttttgaaaactatag |
22885916 |
T |
|
| Q |
398 |
gatttggatagaaagcattgccatcaagatataaatgtgat |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22885917 |
gatttggatagaaagcattgccatcaagatataaatgtgat |
22885957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 98 - 415
Target Start/End: Original strand, 22815050 - 22815371
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
22815050 |
gaattagctgatttcaaataattgatatcgataccaacatggttatcattgatatcatcaaactgcaaatcttgacgagtgtcaagctcaacaccaaaaa |
22815149 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||||||||| | | |||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
22815150 |
catggttgttactgtttccattgttggaatcgttaaagagaccaaggtattgacttggtagtgaatttggtagcccttttgtaggagaaagaacaaaaac |
22815249 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaact |
393 |
Q |
| |
|
|||||| ||||||||| || |||||||| || | |||| ||||| | ||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
22815250 |
aattccttggccactaaaaggtggatattgaggtcttattgcaaacacaaaagtagttgagaaagaagacacactttcattggaagtgtttttgaaaact |
22815349 |
T |
|
| Q |
394 |
ataggatttggatagaaagcat |
415 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22815350 |
ataggatttggatagaaagcat |
22815371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 98 - 411
Target Start/End: Original strand, 22889315 - 22889632
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22889315 |
gaatcagctgatttcaaatcattgatatcaattccaacatggttatcgttgatatcatcaaactcaaaattttgacgagtgtcaagctcaacaccaaaaa |
22889414 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
||||| |||||||||||||| ||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||||||||| || |||||||||||||| |
|
|
| T |
22889415 |
catggttgctactgtttccactgttggaatcgttaaagagaccaaggtattgacttggtagtgaatctggtagcccttttgttggagaaataacaaaaac |
22889514 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaact |
393 |
Q |
| |
|
|||||||||||||| | | ||| ||||| || | |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
22889515 |
aattccatggccaccaatatttgcatattgaggtattatggcaaataaaaaagtagttgagaaagaagacacgctttcactggaagtgtttttgaaaact |
22889614 |
T |
|
| Q |
394 |
ataggatttggatagaaa |
411 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
22889615 |
attggatttggatagaaa |
22889632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 98 - 413
Target Start/End: Original strand, 22840075 - 22840394
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | || || ||| ||||| ||||||||||||| |
|
|
| T |
22840075 |
gaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcactacttagaagagtatcaagttcaacaccaaaaa |
22840174 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtta--gagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
||||| ||| || ||||||| ||||||| | |||| |||||||||||||| | | |||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
22840175 |
catggttgccaccgtttccaatgttggattggttaaagagaccaaggtattgacttggtagtgaatttggtagcccttttgtaggagaaataacgaaaac |
22840274 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaact |
393 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||||||||||||||||| |||||| | ||| |||||||||||||||| |
|
|
| T |
22840275 |
aattccatggccactaagagttggatatgaagattttatggaaaatacaaaagtagttgagaaagaagaaacacttccgctggaagtgtttttgaaaact |
22840374 |
T |
|
| Q |
394 |
ataggatttggatagaaagc |
413 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
22840375 |
ataggatttggatagaaagc |
22840394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 98 - 415
Target Start/End: Original strand, 22831054 - 22831375
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
22831054 |
gaattagctgatttcaaatcattgatatcaattccaacatgattatcattgatatcatcaaactcaaaatttttacgagtgtcaagctcaacaccaaaaa |
22831153 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
||||| |||||||||||||| ||||||| | ||| ||||||||| ||||| || | |||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
22831154 |
catggttgctactgtttccaatgttggagtagttaaagagaccaaagtattgatttggtagtgaatttggtagcccttttgtaggagaaagaacaaaaac |
22831253 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttca--ctgagtgtttttgaaaact |
393 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||| | ||||| |||||||||||||||||| ||||||||| || | ||||||||| |||||| |
|
|
| T |
22831254 |
aattccatggccactaatagatggatacatggattttatggtaaatacaaaagtagttgagaaagatgacacacttgcattcgaagtgtttttaaaaact |
22831353 |
T |
|
| Q |
394 |
ataggatttggatagaaagcat |
415 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
22831354 |
atatgatttggatagaaagcat |
22831375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 101 - 415
Target Start/End: Original strand, 22898289 - 22898607
Alignment:
| Q |
101 |
ttagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| | | | ||| ||||| |||||||||||||||| |
|
|
| T |
22898289 |
ttagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcattaaactcactactaataatagtatcaagttcaacaccaaaaacat |
22898388 |
T |
|
| Q |
201 |
ggctgctactgtttccattgttggaattgtta--gagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaat |
298 |
Q |
| |
|
|| ||||||| |||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| || | |||||||||||| |
|
|
| T |
22898389 |
ggttgctactatttccattgttggatttgttaaagagaccaaggtattgactttgtagtgaatttggtagcccttttgtaggagagacaacaaaaacaat |
22898488 |
T |
|
| Q |
299 |
tccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcact--gagtgtttttgaaaactata |
396 |
Q |
| |
|
||||||||||||| |||||||||||| || | |||| ||||| | ||||||||||||||||||||| |||||| || | |||||| |||||||||||| |
|
|
| T |
22898489 |
tccatggccactaagagttggatattgaggtcttatggcaaacacaaaagtagttgagaaagaagaaacacttccattagaagtgttcttgaaaactata |
22898588 |
T |
|
| Q |
397 |
ggatttggatagaaagcat |
415 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
22898589 |
ggatttggatagaaagcat |
22898607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 98 - 415
Target Start/End: Original strand, 22809667 - 22809988
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || || ||| || || |||||||| |||| |
|
|
| T |
22809667 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatatcatcaaactcactacttagaagagtatctagttcaacaccgaaaa |
22809766 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtta--gagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
||||| | |||||||||||||||||||| | |||| ||||||||| |||| | | | ||||||||| ||||||||||||||||||| |||||| || |
|
|
| T |
22809767 |
catggttactactgtttccattgttggattggttaaagagaccaagatattgacttgcttttgaatttggcagcccttttgtaggtgaaacaacaaatac |
22809866 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaact |
393 |
Q |
| |
|
|||||||||| |||| |||||||||||| || | |||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
22809867 |
aattccatgggaactaagagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagatacactttcactgatagtgtttttgaaaact |
22809966 |
T |
|
| Q |
394 |
ataggatttggatagaaagcat |
415 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
22809967 |
acaggatttggatagaaagcat |
22809988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 102 - 411
Target Start/End: Original strand, 22875943 - 22876256
Alignment:
| Q |
102 |
tagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||| ||| |||| ||||||| | | | ||| ||||| ||||||||||||||||| |
|
|
| T |
22875943 |
tagctgatttcaaatcattgatatcaattccaacatggttatcatcgatatcattaaactcattagtcaaaacagaatcaagttcaacaccaaaaacatg |
22876042 |
T |
|
| Q |
202 |
gctgctactgtttccattgttggaattgtta--gagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaatt |
299 |
Q |
| |
|
| ||||||||||||||||||| ||||||||| |||||||||||||| | | ||||||| |||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
22876043 |
gttgctactgtttccattgtttgaattgttaaagagaccaaggtattgacgtggtagtgagtttggtagcccttttgtaggagaaacaacaaaaacaatt |
22876142 |
T |
|
| Q |
300 |
ccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaactatag |
397 |
Q |
| |
|
|||| |||||| ||||||||||| || | |||| ||||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
22876143 |
ccatcaccactaatagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagacacacttccattggaagtgtttttgaaaactatag |
22876242 |
T |
|
| Q |
398 |
gatttggatagaaa |
411 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22876243 |
gatttggatagaaa |
22876256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 98 - 415
Target Start/End: Original strand, 22893967 - 22894288
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| | ||| ||||| ||||||||||||| |
|
|
| T |
22893967 |
gaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcacgattttcaatagtatcaagttcaacaccaaaaa |
22894066 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgt--tagagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaac |
295 |
Q |
| |
|
| ||| ||||| |||||||||||||||| || |||||||||||||| || ||| |||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
22894067 |
cgtggttgctaggatttccattgttggaatcgtcaaagagaccaaggtatgaaccttggagtgaatttggtagcccttttgtaggagaaagaacaaaaac |
22894166 |
T |
|
| Q |
296 |
aattccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaact |
393 |
Q |
| |
|
||||||||||||||||| ||||||| || | | |||| ||||||| ||||||||||||||| ||||| |||||| || || |||||| || |||||| |
|
|
| T |
22894167 |
aattccatggccactataagttggaccttgatgtcttatggcaaatacaaaagtagttgagaatgaagaaacacttccattggaagtgttcttcaaaact |
22894266 |
T |
|
| Q |
394 |
ataggatttggatagaaagcat |
415 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
22894267 |
atagggtttggatagaaagcat |
22894288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 105 - 415
Target Start/End: Original strand, 22805339 - 22805653
Alignment:
| Q |
105 |
ctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatggct |
204 |
Q |
| |
|
||||||||| ||||||||||| ||||||| ||||||| | | ||| |||||||||||| || | ||||||||| |||||||||||||||||| | |
|
|
| T |
22805339 |
ctgatttcagatcattgatattaataccatcgtggttattgtcaacatcaccaaactcaaaatctttagaagtgtcaagttcaacaccaaaaacatggtt |
22805438 |
T |
|
| Q |
205 |
gctactgtttccattgttggaattgtta--gagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaattcca |
302 |
Q |
| |
|
|| |||||||||||||||||||| ||| |||||||||||||| || | ||||||||||||||||||||||||| || |||| |||||||||||||||| |
|
|
| T |
22805439 |
gccactgtttccattgttggaatcattaaagagaccaaggtattgatttggtagtgaatttggtagcccttttgttggagaaagaacaaaaacaattcca |
22805538 |
T |
|
| Q |
303 |
tggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaactataggat |
400 |
Q |
| |
|
|||||| || || |||||||| || | |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
22805539 |
tggccagtaaaaggtggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcactggaagtgtttttgaaaactattggat |
22805638 |
T |
|
| Q |
401 |
ttggatagaaagcat |
415 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22805639 |
ttggatagaaagcat |
22805653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 142 - 415
Target Start/End: Original strand, 22880631 - 22880908
Alignment:
| Q |
142 |
atcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatggctgctactgtttccattgttggaattgt--tagagacca |
239 |
Q |
| |
|
||||||||| || ||||||||||||| |||| ||||||||| ||||||| ||||||||||| ||||| |||||||| ||||| || ||| |||||||| |
|
|
| T |
22880631 |
atcattgatatcgtcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctaatgtttccagtgttgaaagtgtcaaagagacca |
22880730 |
T |
|
| Q |
240 |
aggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaattccatggccactatgagttggatattaagattttatagcaa |
339 |
Q |
| |
|
||||||| | | |||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||| | || || ||| |||||| || |||| |
|
|
| T |
22880731 |
aggtatttacttggtagcgaatttggtagcccttttgttggtgaaacaacaaaaacaagtccatggccacaagtagctgtatacctagatttgatggcaa |
22880830 |
T |
|
| Q |
340 |
ataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaactataggatttggatagaaagcat |
415 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22880831 |
atacaaaagtagttgagaaagaatacacactttcattggaagtgtttttgaaaactataggatttggatagaaagcat |
22880908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 187 - 415
Target Start/End: Original strand, 22842264 - 22842508
Alignment:
| Q |
187 |
aacaccaaaaacatggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaa |
284 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||| ||||||||||||||||| |
|
|
| T |
22842264 |
aacaccaaaaacatggttgctactatttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatttggttgcccttttgtaggtgaa |
22842363 |
T |
|
| Q |
285 |
a----taaca--aaaacaattccatggccactatgagt------tggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacacttt |
372 |
Q |
| |
|
| |||| |||||||| || ||||||||| |||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22842364 |
agttgaaacaacaaaacaatcccgtggccactaagagttagttctggatctggagattttatggcaaataaaaaagtagttgagaaagaagacacacttt |
22842463 |
T |
|
| Q |
373 |
cact--gagtgtttttgaaaactataggatttggatagaaagcat |
415 |
Q |
| |
|
|||| |||||||||||||||||| || |||||||| ||||||| |
|
|
| T |
22842464 |
cactagaagtgtttttgaaaactattggttttggatataaagcat |
22842508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 276
Target Start/End: Original strand, 22858485 - 22858665
Alignment:
| Q |
98 |
gaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaa |
197 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||| |||||||| |||||| ||||||||||||| || |||| |||||||||||||||| |||| | |
|
|
| T |
22858485 |
gaattagctgatttcaaattattgatgtcaataccagcatggttattattgatatcatcaaactcaagatcttgaatagtgtcaagctcaacagcaaaca |
22858584 |
T |
|
| Q |
198 |
catggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttg |
276 |
Q |
| |
|
||||| ||||| |||||||| ||||||||| ||| || |||||||||||| | | | ||||||| |||||||||||||| |
|
|
| T |
22858585 |
catggttgctagtgtttccaatgttggaatcgttaaagggaccaaggtattggtttggaagtgaatctggtagcccttttg |
22858665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 415
Target Start/End: Original strand, 22858665 - 22858763
Alignment:
| Q |
319 |
gatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcact--gagtgtttttgaaaactataggatttggatagaaagcat |
415 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858665 |
gatattcagattttatggcaaataaaaaagtagttgagaaagaagacacagtttcactagaagtgtttttgaaaactataggatttggatagaaagcat |
22858763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 105 - 364
Target Start/End: Original strand, 22913698 - 22913959
Alignment:
| Q |
105 |
ctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatggct |
204 |
Q |
| |
|
||||||||||| ||||||||||||| |||| |||||| |||||||| ||||| ||||| ||| | ||| |||||||| | ||||||||||||| | |
|
|
| T |
22913698 |
ctgatttcaaaccattgatatcaattccaacatggttgtcattgatatcatcgaactccgtattcataatagtatcaagctccaaaccaaaaacatggtt |
22913797 |
T |
|
| Q |
205 |
gctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaattcca |
302 |
Q |
| |
|
| ||||||||||||| || | || | ||||||||||||| | | ||||||||||||||| ||||||||| || |||| |||||||||||||||| |
|
|
| T |
22913798 |
attgttgtttccattgtttgattcattgaatagaccaaggtattgacttggtagtgaatttggtaacccttttgttggagaaagaacaaaaacaattcca |
22913897 |
T |
|
| Q |
303 |
tggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaaga |
364 |
Q |
| |
|
||||||||| || | ||| | | ||||||||| ||||| | ||||||||| ||||||||||| |
|
|
| T |
22913898 |
tggccactaagattaggaaactcagattttatggcaaaaacaaaagtagtagagaaagaaga |
22913959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 22922209 - 22922289
Alignment:
| Q |
122 |
atatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatgg |
202 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||| |||||||||||| |||| ||||||||| ||||||| |||||| |||| |
|
|
| T |
22922209 |
atatctataccaacatggttatcattaatatcaccaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaagatgg |
22922289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 22933386 - 22933302
Alignment:
| Q |
118 |
attgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacatgg |
202 |
Q |
| |
|
|||||| || ||||||| |||||||||||| || |||||||||||||| | |||| ||||||||| ||| ||| |||||| |||| |
|
|
| T |
22933386 |
attgatgtctataccaacatggttatcattaatatcatcaaactcaaagtcttgagcagtgtcaaactcgacagcaaaaatatgg |
22933302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 101 - 415
Target Start/End: Complemental strand, 21150688 - 21150370
Alignment:
| Q |
101 |
ttagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaacaccaaaaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
21150688 |
ttagctgatttcaaatcattgatatcaataccaacatggttattattgatatcatcaaactcaaaatcttgaacagtgtcaagctcaacaccaaaaacat |
21150589 |
T |
|
| Q |
201 |
ggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcccttttgtaggtgaaataacaaaaacaat |
298 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
21150588 |
ggttgctactgtttccattgttggaattgttaaagagaccaaggtattgtgttggtagtgaatttggtagctcttttgtaggagaaataacaaaaacaat |
21150489 |
T |
|
| Q |
299 |
tccatggccactatgagttggatattaagattttatagcaaataaaaaagtagttgagaaagaagacacactttcactg--agtgtttttgaaaactata |
396 |
Q |
| |
|
||||||||||| | |||||||||||| || | |||| ||||||| |||||||||||| |||||| |||||||||| | | |||||||| |||||||||| |
|
|
| T |
21150488 |
tccatggccaccaagagttggatattgaggtcttatggcaaatacaaaagtagttgaaaaagaaaacacactttcgccggaagtgttttcgaaaactata |
21150389 |
T |
|
| Q |
397 |
ggatttggatagaaagcat |
415 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
21150388 |
ggatttggatagaaagcat |
21150370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 15628278 - 15628336
Alignment:
| Q |
107 |
gatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaa |
165 |
Q |
| |
|
||||||||| ||||||| || ||||||| |||||||||||| || ||||||||| |||| |
|
|
| T |
15628278 |
gatttcaaaccattgatgtctataccaacatggttatcattaatatcatcaaacccaaa |
15628336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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