View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1164_low_2 (Length: 622)
Name: NF1164_low_2
Description: NF1164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1164_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 98 - 597
Target Start/End: Original strand, 48286422 - 48286921
Alignment:
| Q |
98 |
ttgttgcacattttgcatcatcttcctcattctcttcttccttttcatcctcgccgccgcagttatctacattctctatcaaccttccataccagaattc |
197 |
Q |
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| T |
48286422 |
ttgttgcacattttgcatcatcttcctcattctcttcttccttttcatcctcgccgccgcagttatctacattctctaccaaccttccataccagaattc |
48286521 |
T |
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| Q |
198 |
cacctcggttccttccgtgttccaagtttcaacataaccacaaaatccgacggtgcttatctcgacgcaaacacggtaacaatggtggaagtgaagaacc |
297 |
Q |
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| T |
48286522 |
cacctcggttctttccgtgttccaagtttcaacataaccacaaaatccgacggtgcttatctcgacgcaaacacgataacaatggtggaagtgaagaacc |
48286621 |
T |
|
| Q |
298 |
gtaatgcaaaaatggtgtggcgttttgaacaaagtagtgttcagatatgggcagataatggtgatttgaatttaggatcgacgaaggtggctgcgtttga |
397 |
Q |
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| T |
48286622 |
gtaatgcaaaaatggtgtggcgttttgaacaaagtagtgttcagatatgggcagataatggtgatttgaatttaggatcgacgaaggtggctgcgtttga |
48286721 |
T |
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| Q |
398 |
tgtgaaggtgaagaataagacggcggtgaaggcggaaacgaaggttagacatgaggagttgaatgagaaacaaaggaggaagttgaaaagtgcttttagt |
497 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286722 |
tgtgaaggtgaagaataagacggcggtgaagggggaaacgaaggttagacatgaggagttgaatgagaaacaaaggaggaagttgaaaagtgcttttagt |
48286821 |
T |
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| Q |
498 |
agtaaagctttggtgcctagtgttgaggtgaaaacaagaacgagtgttagggttcaaggttggaaatccatgatggttggtgttactgttgtctgtggtg |
597 |
Q |
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| T |
48286822 |
agtaaagctttggtgcctagtgttgaggtgaaaacaagaacgagtgttagggttcaaggttggaaatccatgatgattggtgttactgttgtttgtggtg |
48286921 |
T |
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