View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1164_low_23 (Length: 290)
Name: NF1164_low_23
Description: NF1164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1164_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 9080285 - 9080429
Alignment:
| Q |
34 |
ataccaaaaagaatcaaatatgagaatatatttttgacattgttgtttcggaaccctaagttctgaagatattttataacagttacattacatcaattat |
133 |
Q |
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| T |
9080285 |
ataccgaaaagaatcgaatataagaatatatttttgacattgttgtttagaaaccctaaattctgaagatattttatagcggttacattacatcaatcat |
9080384 |
T |
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| Q |
134 |
ttcataatttcgattaaaagaatctgaattcaaattctacctaaa |
178 |
Q |
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| T |
9080385 |
ttcataatttcgtttaaaagaatctgaattcaaattctacctaaa |
9080429 |
T |
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