View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11650_high_26 (Length: 224)
Name: NF11650_high_26
Description: NF11650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11650_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 313476 - 313274
Alignment:
| Q |
1 |
gtcaacgttgggatggtaagctcatgcttgttttttgacttaacacaattgatgaaatgaaagcttagccaagcacaagaaaaacacaaaggtctactct |
100 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
313476 |
gtcaacgttgggatggtaagctcatgattgttttttgacttaacacaattgatgaaatgaaagcttagccaagcacaagaaaaacacaaagg----ctct |
313381 |
T |
|
| Q |
101 |
a-tctaaggggttttcacgcctgcttccttcacctttaacagtttcctcaaattgtcttttcatagtccgatccgagcttgttttgtgttaacttaaggg |
199 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
313380 |
actctaaggggttttcacgcctgcttccttcacctttaacagtttcctcaaattgtcttttcatagtccgatccgagcttgttttgtgttaacttaaggg |
313281 |
T |
|
| Q |
200 |
acaaacg |
206 |
Q |
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||||||| |
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| T |
313280 |
acaaacg |
313274 |
T |
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