View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11650_high_3 (Length: 619)
Name: NF11650_high_3
Description: NF11650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11650_high_3 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 480; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 22 - 601
Target Start/End: Original strand, 26626059 - 26626638
Alignment:
| Q |
22 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcgga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
26626059 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcttgaaaatcaga |
26626158 |
T |
 |
| Q |
122 |
gtttatgtcaccaacatccgtgatggagaggttattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggag |
221 |
Q |
| |
|
||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26626159 |
gttgatgtcaccaacatcagtgatggagagtttattaccatcagcaatttgaatttgttgattaccatgataagaatgtaaattgtgcaagtattcagag |
26626258 |
T |
 |
| Q |
222 |
gaacccgtcatgtgattggatgcaccagaatcaataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26626259 |
gaacccgtcatgtgattggatgcaccagaatcaagaaaccatggacgagaaacattagaagacttaccatgaattcccatatttgatagagcagcaagta |
26626358 |
T |
 |
| Q |
322 |
ccatttgttgaatcatttcaggctgcacagaaccaccatcagatgcactagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttgcgt |
421 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
26626359 |
ccatttgttgaatcatttcaggctgtagagaaccaccatcagatgcactagtaattgtaggaggcgctgcagagctagtagtggcatgtaaagcttgtgt |
26626458 |
T |
 |
| Q |
422 |
cggatattgtgttcgccttggaggacggatgggacaatcaaagatgacatgaccattttgtttgcagtatttgcaaaactgagtggtacaactgcgagca |
521 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
26626459 |
tggatattgtgttcgccgtgggggacggatgggacaatcaaagataacatgaccattttgtttgcagtatttgcaaaacttagcggtacagctgcgagca |
26626558 |
T |
 |
| Q |
522 |
acatgtccaaattgtttgcaggtaaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26626559 |
acatgcccaaattgtttgcaggtgaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
26626638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 22 - 601
Target Start/End: Complemental strand, 49118061 - 49117482
Alignment:
| Q |
22 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcgga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
49118061 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcttgaaaatcaga |
49117962 |
T |
 |
| Q |
122 |
gtttatgtcaccaacatccgtgatggagaggttattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggag |
221 |
Q |
| |
|
||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
49117961 |
gttgatgtcaccaacatcagtgatggagagtttattaccatcagcaatttgaatttgttgattaccatgataagaatgtaaattgtgcaagtattcagag |
49117862 |
T |
 |
| Q |
222 |
gaacccgtcatgtgattggatgcaccagaatcaataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49117861 |
gaacccgtcatgtgattggatgcaccagaatcaagaaaccatggacgagaaacattagaagacttaccatgaattcccatatttgatagagcagcaagta |
49117762 |
T |
 |
| Q |
322 |
ccatttgttgaatcatttcaggctgcacagaaccaccatcagatgcactagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttgcgt |
421 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
49117761 |
ccatttgttgaatcatttcaggctgtagagaaccaccatcagatgcactagtaattgtaggaggcgctgcagagctagtagtggcatgtaaagcttgtgt |
49117662 |
T |
 |
| Q |
422 |
cggatattgtgttcgccttggaggacggatgggacaatcaaagatgacatgaccattttgtttgcagtatttgcaaaactgagtggtacaactgcgagca |
521 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
49117661 |
tggatattgtgttcgccgtgggggacggatgggacaatcaaagataacatgaccattttgtttgcagtatttgcaaaacttagcggtacagctgcgagca |
49117562 |
T |
 |
| Q |
522 |
acatgtccaaattgtttgcaggtaaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49117561 |
acatgcccaaattgtttgcaggtgaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
49117482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 26635470 - 26635794
Alignment:
| Q |
22 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcgga |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || |
|
|
| T |
26635470 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaaacacgtcttgaaaatcaga |
26635569 |
T |
 |
| Q |
122 |
gtttatgtcaccaacatccgtgatggagaggttattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggag |
221 |
Q |
| |
|
||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26635570 |
gttgatgtcaccaacatcagtgatggagagtttattaccatcagcaatttgaatttgttgattaccatgataagaatgtaaattgtgcaagtattcagag |
26635669 |
T |
 |
| Q |
222 |
gaacccgtcatgtgattggatgcaccagaatcaataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
26635670 |
gaacccgtcatgtgattggatgcaccagaatcaagaaaccatggacgagaaacattagaagacttaacatgaattcccatatatgatagagcagcaagta |
26635769 |
T |
 |
| Q |
322 |
ccatttgttgaatcatttcaggctg |
346 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
26635770 |
ccatttgttgaatcatttcaggctg |
26635794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 154 - 601
Target Start/End: Original strand, 15821058 - 15821503
Alignment:
| Q |
154 |
tattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggaggaacccgtcatgtgattggatgcaccagaatc |
253 |
Q |
| |
|
|||||||| || |||||||||||| |||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
15821058 |
tattaccagcaacaatttgaattttctgattaccataataagaatgtaa-ttgtgcaagtattcagaggaacccgtcatgtgattggatgcactcgaatc |
15821156 |
T |
 |
| Q |
254 |
aataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagtaccatttgttgaatcatttcaggctgcacagaa |
353 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||| |||||| ||| | |||| |
|
|
| T |
15821157 |
aagaaaccatggacgagaaacattaggagacttaccatgaattccaatgtttgaaagagcagcaagtacaatttgttgaatcttttcag-ctgtagagaa |
15821255 |
T |
 |
| Q |
354 |
ccaccatcagatgcactagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttgcgtcggatattgtgttcgccttggaggacggatgg |
453 |
Q |
| |
|
||||||||||||||||||||||| | | | | |||||||| |||||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||| |
|
|
| T |
15821256 |
tcaccatcagatgcactagtaattaaggtatcaactgcagagatagtagtgacatgtaaagcttgtgtcagatgttgtgttcgcagtggaggacggatgg |
15821355 |
T |
 |
| Q |
454 |
gacaatcaaagatgacatgaccattttgtttgcagtatttgcaaaactgagtggtacaactgcgagcaacatgtccaaattgtttgcaggtaaaacattg |
553 |
Q |
| |
|
|||||||| |||||| | |||| ||||| |||||||| ||| |||||| | || |||| || ||||||| |||||||||||||||||||| ||| |||| |
|
|
| T |
15821356 |
gacaatcagagatgaaaggacctttttgcttgcagtagttgtaaaacttaatgttacagttgggagcaacctgtccaaattgtttgcaggtgaaatattg |
15821455 |
T |
 |
| Q |
554 |
tacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| |||| | ||||||| |
|
|
| T |
15821456 |
tacttgtcgcatatcacatcctttacctctactctgagtaacatatgc |
15821503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 22 - 601
Target Start/End: Original strand, 35936904 - 35937483
Alignment:
| Q |
22 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcgga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35936904 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcttgaaaatcgga |
35937003 |
T |
 |
| Q |
122 |
gtttatgtcaccaacatccgtgatggagaggttattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggag |
221 |
Q |
| |
|
||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
35937004 |
gttgatgtcaccaacatcagtgatggagagtttattaccatcagcaatttgaatttgttgattaccatgataagaatgtaaattgtgcaagtattcagag |
35937103 |
T |
 |
| Q |
222 |
gaacccgtcatgtgattggatgcaccagaatcaataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35937104 |
gaacccgtcatgtgattggatgcaccagaatcaagaaaccatggacgagaaacattagaagacttaccatgaattcccatatttgatagagcagcaagta |
35937203 |
T |
 |
| Q |
322 |
ccatttgttgaatcatttcaggctgcacagaaccaccatcagatgcactagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttgcgt |
421 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
35937204 |
ccatttgttgaatcatttcaggctgtagagaaccaccatcagatgcactagtaattgaaggaggcgctgcagagctagtagtggcatgtaaagcttatgt |
35937303 |
T |
 |
| Q |
422 |
cggatattgtgttcgccttggaggacggatgggacaatcaaagatgacatgaccattttgtttgcagtatttgcaaaactgagtggtacaactgcgagca |
521 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
35937304 |
tggatattgtgttcgccgtgggggacggatgggacaatcaaagataacatgaccaatttgtttgcagtatttgcaaaacttagcggtacagctgcgagca |
35937403 |
T |
 |
| Q |
522 |
acatgtccaaattgtttgcaggtaaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35937404 |
acatgcccaaattgtttgcaggtgaaacattgtacttgtcgcatatcacgtcccttacctttactttgagcagcatatgc |
35937483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 70 - 418
Target Start/End: Original strand, 4866004 - 4866352
Alignment:
| Q |
70 |
acaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcggagtttatgtcaccaacatccgtgatggagaggttattaccatcagcaat |
169 |
Q |
| |
|
||||||| || ||||||||||| ||||||||||| || || |||||| | |||||||||||||||| | ||||| || ||| |||||||||||||||| |
|
|
| T |
4866004 |
acaataagttggaagcaagtccaggtgatacaagaacatctcgaaaaccagagtttatgtcaccaagagtagtgatagaaagggtattaccatcagcaat |
4866103 |
T |
 |
| Q |
170 |
ttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggaggaacccgtcatgtgattggatgcaccagaatcaataaaccatggacga |
269 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
4866104 |
ttgaattttctgattaccatcgtaagaatgtaaattgtgcaagtattcagaggaacccgtcatgtgattggatgcaccggaatcaagaaaccatggacga |
4866203 |
T |
 |
| Q |
270 |
gaaacattaggagacttaccatgaattcccatatttgatagagcagcaagtaccatttgttgaatcatttcaggctgcacagaaccaccatcagatgcac |
369 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| |
|
|
| T |
4866204 |
gaaacattaggagacttaccatgaattcccatccttgaaagagcagcaattaccatttgttgaatcatttcagactgtagagaaccaccatcagatgcac |
4866303 |
T |
 |
| Q |
370 |
tagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttg |
418 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4866304 |
tagtaattgaaggagcagctgcagagctagtagtggcatgtaaagcttg |
4866352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 463; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 22 - 601
Target Start/End: Complemental strand, 21692007 - 21691426
Alignment:
| Q |
22 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcgga |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21692007 |
cacgagaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgttacgaaaatcgga |
21691908 |
T |
 |
| Q |
122 |
gtttatgtcaccaacatccgtgatggagaggttattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggag |
221 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
21691907 |
gttgatgtcaccaacatcagtgatggagaggttatttccatcagcaatttgaatttgttgattaccatgataagaagctaaattgtgcaagtattcagag |
21691808 |
T |
 |
| Q |
222 |
gaacccgtcatgtgattggatgcaccagaatcaataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagta |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
21691807 |
gaacccgtcatgtgattggatgcaccagaatcaagaaaccatggacgagaaacattagaagacttaacatgaattcccatatatgatagagcagcaagta |
21691708 |
T |
 |
| Q |
322 |
ccatttgttgaatcatttcaggctgcacagaaccaccatcagat--gcactagtaattgaaggagccgctgcagagctagtagtggcatgtaaagcttgc |
419 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
21691707 |
ccatttgttgaatcatttcaggctgtagagaagcaccatcagatgcgcactagtaattgaaggagtcgctgcagagctagtagtagcatgtaaagcttgt |
21691608 |
T |
 |
| Q |
420 |
gtcggatattgtgttcgccttggaggacggatgggacaatcaaagatgacatgaccattttgtttgcagtatttgcaaaactgagtggtacaactgcgag |
519 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||| ||||| | |
|
|
| T |
21691607 |
gtcggatattgtgttcgccgtggaggacggatgggacaatcaaagataacatgaacattttgtttgtagtatttgcaaaacttagtggtacagctgcgtg |
21691508 |
T |
 |
| Q |
520 |
caacatgtccaaattgtttgcaggtaaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21691507 |
caacatgtccaaattgtttgcaggtgaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
21691426 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 137; Significance: 3e-71; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 54 - 342
Target Start/End: Original strand, 17605658 - 17605946
Alignment:
| Q |
54 |
accaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcggagtttatgtcaccaacatccgtgatggagaggt |
153 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||| ||||| || || |
|
|
| T |
17605658 |
accaattgaccaacagacagtaaattggaagcaagtccaggtgatacaagcacatcccgaaaatcagagtttatgtcaccaacatcagtgatagaaagag |
17605757 |
T |
 |
| Q |
154 |
tattaccatcagcaatttgaatttgttgattaccatgataagaatgcaaattgtgcaagtatttggaggaacccgtcatgtgattggatgcaccagaatc |
253 |
Q |
| |
|
|||||||||| ||||||||||||| | |||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||| |||||||| |
|
|
| T |
17605758 |
tattaccatcggcaatttgaattttcttattaccatcataagaatgtaaattgtgcaagtattctaaggaacccgtcatgtgataggatgcgccagaatc |
17605857 |
T |
 |
| Q |
254 |
aataaaccatggacgagaaacattaggagacttaccatgaattcccatatttgatagagcagcaagtaccatttgttgaatcatttcag |
342 |
Q |
| |
|
|| ||||||||| ||||| |||| | ||||||||| |||||||| || || ||||||| || ||||||||||||||||||||||| |
|
|
| T |
17605858 |
aagaaaccatgggtgagaagcatttgaagacttaccctgaattccaattgatggaagagcagaaattaccatttgttgaatcatttcag |
17605946 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 601
Target Start/End: Original strand, 17606093 - 17606184
Alignment:
| Q |
510 |
caactgcgagcaacatgtccaaattgtttgcaggtaaaacattgtacttgtcgcatatcacgtcccttacctctactttgagcagcatatgc |
601 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||| | ||||||||||| ||| |||||||| | || ||||||| || || ||||||||||| |
|
|
| T |
17606093 |
caactacgagcaatatgtccaaactgtttgcaagagaaacattgtacctgttgcatatcatgacctttacctcgacgctgggcagcatatgc |
17606184 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 17039479 - 17039325
Alignment:
| Q |
27 |
gaaaaattaacattacaattgttatccaccaattgaccaaccgacaataaattagaagcaagtccgggtgatacaagcacgtcacgaaaatcggagttta |
126 |
Q |
| |
|
||||| |||||||||||||| | ||| |||||||||||||| | ||||| || ||||||||||| |||||||||||||| || |||||||| ||||||| |
|
|
| T |
17039479 |
gaaaacttaacattacaattatcatctaccaattgaccaacagtcaataggttggaagcaagtccaggtgatacaagcacatctcgaaaatcagagttta |
17039380 |
T |
 |
| Q |
127 |
tgtcaccaacatccgt----gatggagaggttattaccatcagcaatttgaattt |
177 |
Q |
| |
|
||| |||||||| || ||| || ||| ||||||||||| |||||||||||| |
|
|
| T |
17039379 |
tgttaccaacattagtgatcgatagaaagggtattaccatcatcaatttgaattt |
17039325 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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