View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11650_low_19 (Length: 266)
Name: NF11650_low_19
Description: NF11650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11650_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 361216 - 360954
Alignment:
| Q |
1 |
gaacatgtatttcaaggcaaagttggattctgggttataatgatacaacaattgattgttcaggttgcttcaaccattgtgtattcagtcactggtggaa |
100 |
Q |
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| T |
361216 |
gaacatgtatttcaaggcaaagttggattctgggttataatgatacaacaattgattgttcaggttgcttcaaccattgtgtattcagtcactggtggaa |
361117 |
T |
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| Q |
101 |
aatcacttaagaagttctgtgaaataatgactccaataatgccaatgtttgatgaaattagacaaacatattatatttgcttctttgtttgtatacagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
361116 |
aatcacttaagaagttctgtgaaataatgactccaataatgccaatgtttgatgaaattagacaaacatattatatctgcttctttgtttgtatacagtt |
361017 |
T |
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| Q |
201 |
actcctttcacaaattcctaacttcaatactttaaaaggaatctcgttgctcgcggcattcat |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
361016 |
actcctttcacaaattcctaacttcaatactttaaaaggaatctcgctgctcgcggcattcat |
360954 |
T |
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