View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_high_45 (Length: 344)
Name: NF11651_high_45
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 21286959 - 21287272
Alignment:
| Q |
16 |
agacacaatcatagcacccc-gatccaaactcgctctcagtgtagtaccaattcttattagcatcctgataatagtgcattttgtgcacaacacactaat |
114 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21286959 |
agacacaatcatagcacccccgatccaaactcgctctcagtgtagtaccaattcttattagcatcctgataatagtgcattttgtgcacaacacactaat |
21287058 |
T |
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| Q |
115 |
caaatccactcctatcagattgtcccttgagcaaacttgtaacaatgtttatttgttgggaattcaacactttccagataaaacgacaataagagagagc |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |
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| T |
21287059 |
caaatccactcctatcagattgtcccttgagcaaacttgtaacaatgtttattcgttgggaattcaacactttccaaataaaacgacaataagggagagc |
21287158 |
T |
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| Q |
215 |
acgaaaactagtctccctatactcaagaatcttgg-aaatgaagaaacatttggaagttgacaggactgtgattattcatcattaatttaccaaatacaa |
313 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21287159 |
acgaaaactagtctccctatactcaagaatcttggaaaatgaagaaacatttggaagttgacaggactgtgattattcatcattaatttaccaaatacaa |
21287258 |
T |
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| Q |
314 |
gcaaaccttattct |
327 |
Q |
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|||||||||||||| |
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| T |
21287259 |
gcaaaccttattct |
21287272 |
T |
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