View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_high_47 (Length: 330)
Name: NF11651_high_47
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_high_47 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 315
Target Start/End: Original strand, 35356023 - 35356320
Alignment:
| Q |
19 |
ctccaagtgacagtattggtgttgttgttgatgcttctgtgtttcacgagtcatttctagccggcggcattggtaagctatatgcttctgataagcgtgc |
118 |
Q |
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| T |
35356023 |
ctccaagtgacggtattggtgttgttgttgatgcttctgtgtttcacgagtcatttctagccggcggcattggtaagctatatgcttctgataagcgtgc |
35356122 |
T |
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| Q |
119 |
agaaatttaagcttgcattcatttgtggaaatccttactgcatgatatatcactgaa-nnnnnnngtatgctgcttcattattttagaaaataaacatgt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
35356123 |
agaaatttaagcttgcattcatttgtggaaatccttactgcatgatatatcactgaattttttttgtatgctgcttcattattttagaaaataaacatgt |
35356222 |
T |
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| Q |
218 |
ggaaatccttactgttttagcaaaactgtttcagcaaaactgtttcttggtaacgttctcaaggaaggaactccaatttctatcaaccctcttgtgat |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35356223 |
ggaaatccttactgttttagcaaaactgtttcagcaaaactgtttcttggtaacgttctcaaggaaggaactccaatttctatcaaccctcttgtgat |
35356320 |
T |
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