View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11651_high_58 (Length: 279)

Name: NF11651_high_58
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11651_high_58
NF11651_high_58
[»] chr4 (41 HSPs)
chr4 (1-263)||(49803139-49803401)
chr4 (201-251)||(3155543-3155593)
chr4 (105-241)||(47118947-47119085)
chr4 (137-251)||(6364089-6364206)
chr4 (140-240)||(51630062-51630165)
chr4 (191-251)||(25885799-25885859)
chr4 (199-251)||(26883935-26883987)
chr4 (199-251)||(30024640-30024692)
chr4 (193-248)||(3175894-3175949)
chr4 (108-187)||(17822849-17822928)
chr4 (200-247)||(47946142-47946189)
chr4 (201-251)||(7601699-7601749)
chr4 (105-240)||(22666439-22666578)
chr4 (194-251)||(5131305-5131362)
chr4 (201-250)||(17884009-17884058)
chr4 (218-251)||(44119259-44119292)
chr4 (105-154)||(49939932-49939981)
chr4 (110-246)||(55414406-55414545)
chr4 (200-244)||(13216283-13216327)
chr4 (200-240)||(23459579-23459619)
chr4 (199-251)||(47970258-47970310)
chr4 (200-251)||(49004051-49004100)
chr4 (202-246)||(51953435-51953479)
chr4 (119-240)||(1407907-1408032)
chr4 (105-180)||(22662024-22662099)
chr4 (200-251)||(44138499-44138550)
chr4 (105-172)||(55064857-55064924)
chr4 (201-231)||(42685384-42685414)
chr4 (199-245)||(51055315-51055361)
chr4 (199-251)||(437510-437563)
chr4 (107-168)||(21523584-21523644)
chr4 (201-246)||(43505901-43505946)
chr4 (206-251)||(44249226-44249271)
chr4 (199-248)||(49219082-49219131)
chr4 (199-251)||(51044536-51044589)
chr4 (201-245)||(403473-403517)
chr4 (118-186)||(825485-825552)
chr4 (189-249)||(22684584-22684644)
chr4 (201-241)||(25332724-25332764)
chr4 (191-251)||(26520299-26520359)
chr4 (201-241)||(47800580-47800620)
[»] chr2 (59 HSPs)
chr2 (105-232)||(16451084-16451207)
chr2 (105-250)||(18066069-18066217)
chr2 (201-251)||(2416253-2416303)
chr2 (116-251)||(3611166-3611304)
chr2 (105-246)||(45229457-45229600)
chr2 (105-249)||(43570356-43570502)
chr2 (105-180)||(4606939-4607014)
chr2 (105-187)||(1625907-1625989)
chr2 (119-234)||(26626829-26626948)
chr2 (106-187)||(40279274-40279355)
chr2 (106-187)||(40279344-40279425)
chr2 (201-246)||(41241212-41241257)
chr2 (199-251)||(3673747-3673799)
chr2 (124-251)||(7928299-7928424)
chr2 (207-246)||(3932295-3932334)
chr2 (202-249)||(39567845-39567892)
chr2 (201-251)||(10143112-10143162)
chr2 (107-185)||(28039316-28039393)
chr2 (105-238)||(36043857-36043993)
chr2 (201-251)||(42457888-42457938)
chr2 (200-258)||(44119717-44119775)
chr2 (189-251)||(44600479-44600543)
chr2 (199-251)||(10150695-10150747)
chr2 (201-237)||(33981091-33981127)
chr2 (105-180)||(750684-750759)
chr2 (105-168)||(2142680-2142743)
chr2 (116-187)||(9174822-9174893)
chr2 (199-250)||(9395071-9395122)
chr2 (200-251)||(23747244-23747295)
chr2 (206-249)||(26143726-26143769)
chr2 (106-189)||(35378999-35379081)
chr2 (199-250)||(40837506-40837557)
chr2 (201-248)||(42420374-42420421)
chr2 (206-249)||(43199356-43199399)
chr2 (201-247)||(4026761-4026807)
chr2 (201-251)||(5133712-5133762)
chr2 (201-247)||(9195358-9195404)
chr2 (201-251)||(13866829-13866879)
chr2 (116-170)||(16398138-16398192)
chr2 (105-187)||(33941916-33941997)
chr2 (201-246)||(12464553-12464598)
chr2 (119-251)||(29316771-29316905)
chr2 (200-249)||(35459852-35459901)
chr2 (201-246)||(41407246-41407291)
chr2 (199-247)||(1939410-1939458)
chr2 (206-246)||(2195906-2195946)
chr2 (199-259)||(3227739-3227799)
chr2 (199-251)||(3423846-3423898)
chr2 (223-251)||(9875559-9875587)
chr2 (199-251)||(11344362-11344414)
chr2 (199-251)||(11863728-11863780)
chr2 (199-251)||(13630359-13630411)
chr2 (106-154)||(15120223-15120270)
chr2 (199-251)||(18962116-18962168)
chr2 (199-247)||(29633016-29633064)
chr2 (199-247)||(32098386-32098434)
chr2 (201-237)||(36114603-36114639)
chr2 (199-251)||(40672874-40672926)
chr2 (199-247)||(42817454-42817502)
[»] chr5 (52 HSPs)
chr5 (107-251)||(39105404-39105551)
chr5 (119-247)||(9202743-9202874)
chr5 (105-247)||(7674592-7674736)
chr5 (105-251)||(1465001-1465149)
chr5 (129-251)||(4014429-4014554)
chr5 (140-251)||(12425511-12425625)
chr5 (106-185)||(7984978-7985057)
chr5 (200-251)||(42583089-42583140)
chr5 (199-245)||(10363696-10363742)
chr5 (201-247)||(10639897-10639943)
chr5 (201-251)||(37112338-37112388)
chr5 (201-251)||(40097483-40097533)
chr5 (201-246)||(3932765-3932810)
chr5 (201-250)||(14932231-14932280)
chr5 (202-251)||(33459016-33459065)
chr5 (119-180)||(42099867-42099928)
chr5 (191-251)||(985573-985633)
chr5 (105-169)||(3977333-3977396)
chr5 (199-251)||(9927525-9927577)
chr5 (199-251)||(12460079-12460130)
chr5 (199-238)||(12595818-12595857)
chr5 (200-251)||(29117009-29117060)
chr5 (140-246)||(39594753-39594861)
chr5 (200-251)||(40048359-40048410)
chr5 (201-247)||(465898-465944)
chr5 (202-240)||(7853609-7853647)
chr5 (193-251)||(12407733-12407791)
chr5 (105-187)||(17368683-17368764)
chr5 (117-187)||(25461310-25461379)
chr5 (191-253)||(36796776-36796838)
chr5 (201-251)||(40452231-40452281)
chr5 (209-247)||(41981796-41981834)
chr5 (201-251)||(42646855-42646905)
chr5 (206-251)||(706403-706448)
chr5 (105-146)||(7853688-7853729)
chr5 (199-240)||(10303752-10303793)
chr5 (200-249)||(12595530-12595579)
chr5 (201-246)||(35446000-35446045)
chr5 (106-187)||(37611198-37611278)
chr5 (106-187)||(37787928-37788008)
chr5 (199-248)||(37968834-37968883)
chr5 (201-246)||(42500305-42500350)
chr5 (200-248)||(6582911-6582959)
chr5 (106-154)||(7808545-7808593)
chr5 (219-251)||(18704133-18704165)
chr5 (208-248)||(27106010-27106050)
chr5 (199-251)||(34112815-34112867)
chr5 (201-241)||(34669807-34669847)
chr5 (199-251)||(35135740-35135792)
chr5 (106-154)||(37794681-37794728)
chr5 (203-251)||(39128579-39128627)
chr5 (200-240)||(42569059-42569099)
[»] chr6 (36 HSPs)
chr6 (106-251)||(9093538-9093686)
chr6 (200-251)||(9559620-9559671)
chr6 (199-248)||(10728575-10728624)
chr6 (199-251)||(24476542-24476594)
chr6 (199-251)||(29274307-29274359)
chr6 (200-251)||(24836278-24836329)
chr6 (204-250)||(10645409-10645455)
chr6 (105-187)||(20368162-20368243)
chr6 (105-187)||(31624097-31624178)
chr6 (199-248)||(103396-103445)
chr6 (105-170)||(9912172-9912237)
chr6 (201-251)||(507160-507210)
chr6 (110-187)||(34430447-34430524)
chr6 (199-247)||(31583645-31583693)
chr6 (200-247)||(264315-264362)
chr6 (105-172)||(2455281-2455348)
chr6 (200-251)||(20671944-20671995)
chr6 (217-247)||(2023725-2023755)
chr6 (217-251)||(5554861-5554895)
chr6 (201-251)||(6654555-6654605)
chr6 (217-251)||(33068657-33068691)
chr6 (205-251)||(33736778-33736824)
chr6 (117-154)||(2455031-2455068)
chr6 (212-253)||(5884949-5884990)
chr6 (201-246)||(8147647-8147692)
chr6 (201-246)||(18076141-18076186)
chr6 (200-249)||(31624200-31624249)
chr6 (119-180)||(31813175-31813236)
chr6 (201-249)||(2206532-2206580)
chr6 (214-250)||(5564222-5564258)
chr6 (201-249)||(8349744-8349792)
chr6 (199-251)||(10749306-10749357)
chr6 (107-187)||(13907592-13907672)
chr6 (188-248)||(29940739-29940799)
chr6 (217-249)||(31672012-31672044)
chr6 (219-251)||(34544548-34544580)
[»] chr1 (51 HSPs)
chr1 (116-242)||(51695487-51695615)
chr1 (107-240)||(24915034-24915170)
chr1 (105-251)||(37842337-37842485)
chr1 (105-240)||(31517722-31517859)
chr1 (117-251)||(34952155-34952292)
chr1 (199-249)||(49517012-49517062)
chr1 (201-246)||(13809943-13809988)
chr1 (117-251)||(15784275-15784406)
chr1 (119-187)||(27820332-27820400)
chr1 (105-251)||(3887613-3887762)
chr1 (131-241)||(9656600-9656713)
chr1 (208-251)||(33339507-33339550)
chr1 (200-251)||(41163083-41163134)
chr1 (201-251)||(7028232-7028282)
chr1 (199-245)||(14737783-14737829)
chr1 (125-187)||(45975697-45975759)
chr1 (207-249)||(49557083-49557125)
chr1 (205-250)||(9572192-9572237)
chr1 (116-251)||(27146247-27146378)
chr1 (201-246)||(37517274-37517319)
chr1 (201-253)||(1432453-1432505)
chr1 (199-251)||(4549806-4549858)
chr1 (199-247)||(11211062-11211110)
chr1 (199-251)||(15360834-15360886)
chr1 (199-251)||(23544718-23544770)
chr1 (121-177)||(38503462-38503518)
chr1 (199-251)||(48748661-48748712)
chr1 (199-251)||(50319232-50319284)
chr1 (217-248)||(4777381-4777412)
chr1 (119-251)||(27140425-27140552)
chr1 (200-251)||(36151584-36151635)
chr1 (105-172)||(37473425-37473492)
chr1 (105-172)||(38018345-38018412)
chr1 (201-239)||(15477530-15477568)
chr1 (201-251)||(34619458-34619508)
chr1 (200-250)||(37841939-37841989)
chr1 (201-251)||(45145166-45145216)
chr1 (117-154)||(1509959-1509995)
chr1 (105-154)||(4699597-4699645)
chr1 (206-247)||(36641819-36641860)
chr1 (201-246)||(47432041-47432086)
chr1 (199-251)||(1255509-1255561)
chr1 (199-247)||(4200173-4200221)
chr1 (215-251)||(6659643-6659679)
chr1 (199-251)||(7274017-7274069)
chr1 (106-154)||(11941302-11941350)
chr1 (200-240)||(15687152-15687192)
chr1 (200-240)||(15687427-15687467)
chr1 (199-251)||(17269190-17269242)
chr1 (202-250)||(39803967-39804015)
chr1 (199-251)||(40357964-40358016)
[»] chr3 (45 HSPs)
chr3 (105-187)||(21367674-21367756)
chr3 (129-251)||(2128263-2128381)
chr3 (199-246)||(10101554-10101601)
chr3 (199-246)||(10212479-10212526)
chr3 (201-247)||(32095271-32095317)
chr3 (201-246)||(30956706-30956751)
chr3 (201-246)||(30972518-30972563)
chr3 (189-250)||(42809242-42809303)
chr3 (108-251)||(402526-402671)
chr3 (199-251)||(3182440-3182492)
chr3 (129-240)||(36783339-36783453)
chr3 (201-249)||(44061103-44061151)
chr3 (199-251)||(48364957-48365009)
chr3 (199-246)||(15304425-15304472)
chr3 (120-187)||(35394494-35394561)
chr3 (199-253)||(1395609-1395663)
chr3 (201-247)||(46778307-46778353)
chr3 (201-246)||(583991-584036)
chr3 (199-240)||(45433017-45433058)
chr3 (210-250)||(36887463-36887503)
chr3 (105-185)||(45541580-45541659)
chr3 (199-246)||(10357378-10357425)
chr3 (105-234)||(24085319-24085452)
chr3 (200-247)||(31403302-31403349)
chr3 (105-180)||(37389197-37389272)
chr3 (163-240)||(33405206-33405286)
chr3 (201-251)||(36189506-36189556)
chr3 (201-247)||(42808923-42808969)
chr3 (201-246)||(849607-849652)
chr3 (205-250)||(5436024-5436069)
chr3 (201-234)||(10704653-10704686)
chr3 (201-250)||(33882969-33883018)
chr3 (218-251)||(37154967-37155000)
chr3 (218-251)||(37200322-37200355)
chr3 (105-154)||(45264347-45264396)
chr3 (201-250)||(48397587-48397636)
chr3 (110-154)||(3194250-3194294)
chr3 (199-251)||(4990635-4990687)
chr3 (199-251)||(22214759-22214811)
chr3 (200-247)||(34638043-34638091)
chr3 (199-247)||(38462225-38462273)
chr3 (203-251)||(39602291-39602339)
chr3 (199-251)||(40122830-40122882)
chr3 (199-251)||(44374722-44374774)
chr3 (199-247)||(49586994-49587042)
[»] chr8 (44 HSPs)
chr8 (105-251)||(10114430-10114578)
chr8 (139-253)||(31884532-31884648)
chr8 (105-154)||(32840967-32841016)
chr8 (191-251)||(1112793-1112853)
chr8 (199-251)||(13652155-13652207)
chr8 (199-251)||(13710798-13710850)
chr8 (199-251)||(14280479-14280531)
chr8 (199-251)||(42597341-42597393)
chr8 (201-240)||(29205759-29205798)
chr8 (201-240)||(42043425-42043464)
chr8 (210-251)||(1929991-1930032)
chr8 (200-249)||(3537110-3537159)
chr8 (199-240)||(35374451-35374492)
chr8 (199-251)||(4558738-4558790)
chr8 (110-154)||(8407678-8407722)
chr8 (199-247)||(12361136-12361184)
chr8 (199-247)||(40280283-40280331)
chr8 (120-187)||(1930042-1930109)
chr8 (107-154)||(15247760-15247807)
chr8 (199-250)||(16210964-16211015)
chr8 (208-251)||(18356259-18356302)
chr8 (208-251)||(26215436-26215479)
chr8 (200-251)||(37444494-37444545)
chr8 (200-251)||(41475139-41475190)
chr8 (109-188)||(43504757-43504835)
chr8 (205-247)||(1074080-1074122)
chr8 (201-251)||(7646146-7646196)
chr8 (201-251)||(14482142-14482192)
chr8 (200-250)||(27465314-27465364)
chr8 (105-170)||(10120780-10120845)
chr8 (110-187)||(27028838-27028915)
chr8 (201-250)||(32976358-32976407)
chr8 (201-246)||(40728498-40728543)
chr8 (199-251)||(7514518-7514570)
chr8 (219-251)||(9928196-9928228)
chr8 (206-246)||(12976158-12976198)
chr8 (119-187)||(20672757-20672824)
chr8 (212-248)||(26820142-26820178)
chr8 (199-251)||(29056069-29056121)
chr8 (203-251)||(29699194-29699242)
chr8 (105-180)||(31716208-31716283)
chr8 (199-251)||(31915347-31915399)
chr8 (200-240)||(42622838-42622878)
chr8 (106-154)||(43368683-43368730)
[»] chr7 (46 HSPs)
chr7 (203-250)||(3968277-3968324)
chr7 (129-251)||(28165031-28165156)
chr7 (131-240)||(40688993-40689105)
chr7 (199-247)||(39591545-39591593)
chr7 (201-249)||(43152982-43153030)
chr7 (105-187)||(44989658-44989741)
chr7 (105-187)||(33678787-33678869)
chr7 (105-187)||(34035924-34036006)
chr7 (202-240)||(34083606-34083644)
chr7 (123-185)||(36517588-36517650)
chr7 (202-251)||(20881717-20881766)
chr7 (202-247)||(21853197-21853242)
chr7 (200-241)||(30180001-30180042)
chr7 (105-233)||(39967878-39968009)
chr7 (201-246)||(48469989-48470034)
chr7 (199-251)||(35536047-35536099)
chr7 (199-250)||(28178910-28178961)
chr7 (184-251)||(33894563-33894629)
chr7 (207-246)||(44216861-44216900)
chr7 (147-249)||(47177578-47177683)
chr7 (217-251)||(1432063-1432097)
chr7 (201-251)||(6824858-6824908)
chr7 (201-251)||(8960707-8960757)
chr7 (189-251)||(27121654-27121716)
chr7 (201-251)||(28613614-28613664)
chr7 (202-240)||(39279913-39279951)
chr7 (209-251)||(44241800-44241842)
chr7 (201-251)||(48157200-48157250)
chr7 (201-238)||(48507674-48507712)
chr7 (201-250)||(389782-389831)
chr7 (191-240)||(2767248-2767297)
chr7 (193-250)||(2894758-2894815)
chr7 (199-252)||(5006587-5006640)
chr7 (105-154)||(11048067-11048115)
chr7 (200-249)||(37832218-37832267)
chr7 (201-246)||(46078092-46078137)
chr7 (202-246)||(119855-119899)
chr7 (199-251)||(1417204-1417256)
chr7 (199-251)||(7244642-7244694)
chr7 (206-250)||(7453483-7453527)
chr7 (107-187)||(19022568-19022648)
chr7 (105-153)||(19719047-19719094)
chr7 (201-241)||(22283824-22283863)
chr7 (199-251)||(23918897-23918949)
chr7 (204-240)||(45004717-45004753)
chr7 (199-247)||(45813258-45813306)
[»] scaffold0103 (1 HSPs)
scaffold0103 (199-252)||(51507-51560)
[»] scaffold0024 (2 HSPs)
scaffold0024 (125-251)||(21287-21408)
scaffold0024 (199-251)||(27516-27568)
[»] scaffold0045 (1 HSPs)
scaffold0045 (199-246)||(84207-84254)
[»] scaffold0508 (1 HSPs)
scaffold0508 (199-251)||(9853-9905)


Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 49803401 - 49803139
Alignment:
Q  1 ttattattatgaatgtaaaaggttcaaaaa-ttaaaaggaaaagatgaggcttgaatggatctggttatctgagcttattcgctgacataagttttatcg 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49803401 ttattattatgaatgtaaaaggttcaaaaaattaaaaggaaaagatgag-cttgaatggatctggttatttgagcttattcgctgacataagttttatcg 49803303  T
Q  100 gaatcacttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||    
T  49803302 gaatcacttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaacatacaacttatgt 49803203  T
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatgataagcgtct 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49803202 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatgataagcgtct 49803139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 3155593 - 3155543
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 47118947 - 47119085
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| ||||| ||||||||||| ||| | ||||||||||||||  || ||| |||| ||||| ||| ||| || |||   || ||||||  |||    
T  47118947 acttatgaaaacaactcatgacattgtt-attggttgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatga 47119045  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    ||||||||||||||  |||||||||||| |||||||||||    
T  47119046 aaacaatttaactttgttttatcttttgatatagaaataa 47119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 6364206 - 6364089
Alignment:
Q  137 agctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa---catacagcttacgtgaaaacaatttaacttcattttatcttttgctat 233  Q
    |||||||||||||||||| || ||| |||||||  | ||||||| ||||   | || |||||| ||||| | ||||| |||| ||||||||||||| |||    
T  6364206 agctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgttat 6364107  T
Q  234 agaaataacttatacata 251  Q
    ||||||| ||||||||||    
T  6364106 agaaatagcttatacata 6364089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 51630165 - 51630062
Alignment:
Q  140 tgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctataga 236  Q
    ||||||||||||||| || ||| |||| ||||| ||||||| |||| |   || ||||||  | ||||||||||||||| |||||||||||||||||| |    
T  51630165 tgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctatata 51630066  T
Q  237 aata 240  Q
    ||||    
T  51630065 aata 51630062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 25885859 - 25885799
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||| | || |||||||    
T  25885859 agcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaatacata 25885799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 26883987 - 26883935
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||||||||||||| ||  || ||||||||||||||||||    
T  26883987 tgaaaacaatttaacttcattttatctcttcttagagaaataacttatacata 26883935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 30024692 - 30024640
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||| ||||    
T  30024692 tgaaaacaattttactttattttatcttttgttatagaaataacttatgcata 30024640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 3175949 - 3175894
Alignment:
Q  193 cttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| || |||||||    
T  3175949 cttacttgaaaacaatttgactttattttatcttttgctatagaagtagcttatac 3175894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 17822849 - 17822928
Alignment:
Q  108 tatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||| || ||||||||||| ||||| |||| |||| |||||||| || ||| |||||||||| ||||||| ||||||    
T  17822849 tatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaaca 17822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 47946189 - 47946142
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||    
T  47946189 gaaaacaatttaacttcattttatcttacgttatagaaataacttata 47946142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7601749 - 7601699
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  7601749 aaaacaatttaactttattttatcctttgctataggaatagcttatacata 7601699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 240
Target Start/End: Complemental strand, 22666578 - 22666439
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa----catacagcttacgtg 200  Q
    |||||||||| ||  ||||||||||| |||| || ||||||| |||||||||| ||| ||||||| || ||||||| ||||    | || ||||||   |    
T  22666578 acttatgaaatcagtttatgacattgatcatgagttgttttctgcttattgtcataagttctccatgatagcttatgaaaaaaagcttatagcttatacg 22666479  T
Q  201 aaaacaatttaacttcattttatcttttgctatagaaata 240  Q
     ||| |||| ||||| ||||||| ||||||||||||||||    
T  22666478 taaaaaattgaactttattttatgttttgctatagaaata 22666439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 5131305 - 5131362
Alignment:
Q  194 ttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| |||||||| |||||||| ||||||||||||| |||| ||| ||||||||||||    
T  5131305 ttacatgaaaacattttaactttattttatcttttgttatataaacaacttatacata 5131362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 17884058 - 17884009
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||| ||||    
T  17884058 aaaacaatttaactttattttatcttttgttatagaaatagcttacacat 17884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 44119259 - 44119292
Alignment:
Q  218 ttttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||||||||||||||||||||    
T  44119259 ttttatcttttgctatagaaataacttatacata 44119292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 49939932 - 49939981
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||||||||  | ||||||||||||||||| ||||||||||||||||||    
T  49939932 acttatgaaaagagcttatgacattgttcataagctgttttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 55414406 - 55414545
Alignment:
Q  110 tgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaaca 206  Q
    ||||| || ||||||||||| ||||| |||| |||||| |||||| || ||| |||||||||| | ||||| ||||||   || ||| || |  |||| |    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaa 55414505  T
Q  207 atttaacttcattttatcttttgctatagaaataacttat 246  Q
    | ||||||| |||||||||||| | ||||||||| |||||    
T  55414506 aattaactttattttatcttttccaatagaaatagcttat 55414545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 13216283 - 13216327
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataactt 244  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||    
T  13216283 gaaaacgatttaactttattttatcttttgctataaaaataactt 13216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 23459619 - 23459579
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  23459619 gaaaacaacttaacttcattttatcttttgctataaaaata 23459579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 47970310 - 47970258
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| | ||| |||||||||||||||||| |||||||||| ||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacata 47970258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 49004051 - 49004100
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  49004051 gaaaacaatttaact--attttatcttttgctatagaaattgcttatacata 49004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 51953435 - 51953479
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  51953435 aaacaatttaacttcattttaccttatgttatagaaataacttat 51953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 1408032 - 1407907
Alignment:
Q  119 cttatgacattgttcattagctgtttt-cagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaact 214  Q
    ||||||||||| ||||| ||||||||| ||||||||  || ||| || ||| ||| ||||||| ||||||   | ||||||||   ||||||||||||||    
T  1408032 cttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttatgaaaacagcttgcagcttacacaaaaacaatttaact 1407933  T
Q  215 tcattttatcttttgctatagaaata 240  Q
      |||||||  |||||||||||||||    
T  1407932 ctattttattatttgctatagaaata 1407907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 22662099 - 22662024
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    |||||||||| ||  ||||||||||| |||| || ||||||| |||||||||| ||| ||||||| || |||||||    
T  22662099 acttatgaaatcagtttatgacattgatcatgagttgttttctgcttattgtcataagttctccatgatagcttat 22662024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 44138550 - 44138499
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| ||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  44138550 gaaagcaatttaactttattttatcttctgctatagaaacagcttatacata 44138499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 55064924 - 55064857
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaaga 172  Q
    |||| ||||| |||||||||||||| |||| ||||| |||||| |||||| || ||| ||||||||||    
T  55064924 acttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaaga 55064857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 231
Target Start/End: Complemental strand, 42685414 - 42685384
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgct 231  Q
    |||||||||||||||||||||||||||||||    
T  42685414 aaaacaatttaacttcattttatcttttgct 42685384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 51055315 - 51055361
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataactta 245  Q
    ||||||||| |||||||||||||||||| || |||||||||| ||||    
T  51055315 tgaaaacaacttaacttcattttatcttatgttatagaaatagctta 51055361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 437510 - 437563
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctat-agaaataacttatacata 251  Q
    |||| |||||||||||| ||||||||||||||||| | ||||| ||||||||||    
T  437510 tgaacacaatttaactttattttatcttttgctataaaaaatagcttatacata 437563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 21523644 - 21523584
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctcc 168  Q
    |||||||| |||||||||||||| ||||| |||| ||||||||||||| || ||| ||||||    
T  21523644 ttatgaaaacaacttatgacatttttcataagct-ttttcagcttattttcataacttctcc 21523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 43505946 - 43505901
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||| | |||||||||||||||||| ||||| |||||    
T  43505946 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 43505901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 44249271 - 44249226
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||||    
T  44249271 aatttaactttgttttatcttttgttattgaaataacttatacata 44249226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 49219131 - 49219082
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    |||||| ||||| |||| ||||||| ||||| ||||||||||||||||||    
T  49219131 tgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 51044536 - 51044589
Alignment:
Q  199 tgaaaacaa-tttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||| ||| |||| ||||||||||||| |||||||||| ||||||||||    
T  51044536 tgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacata 51044589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 403517 - 403473
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataactta 245  Q
    ||||||||||||| | |||||||||||||||||| || |||||||    
T  403517 aaaacaatttaacgttattttatcttttgctataaaagtaactta 403473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 825485 - 825552
Alignment:
Q  118 acttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaac 186  Q
    ||||||||||| | |||||| |||||||||||||||| || ||| |||||||| | ||||||| |||||    
T  825485 acttatgacat-gctcattaactgttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 22684584 - 22684644
Alignment:
Q  189 acagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||  |||||||||||| |||| |||||| | |||| |||||||||| ||||||||    
T  22684584 acagcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttataca 22684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 25332764 - 25332724
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    |||||||||||||||||||| | ||||| ||||||||||||    
T  25332764 aaaacaatttaacttcatttcaacttttactatagaaataa 25332724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 26520299 - 26520359
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||  |||||||||||||||| |||| |||||||| |||||||| |  |||||||||    
T  26520299 agcttacacgaaaacaatttaactttatttcatcttttgttatagaaacagtttatacata 26520359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 47800620 - 47800580
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    |||||| |||||||| ||||||||||||| |||||||||||    
T  47800620 aaaacattttaactttattttatcttttgttatagaaataa 47800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 16451207 - 16451084
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaa 204  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||   | |||||||||| ||||||  |||    ||||||||  ||||||    
T  16451207 acttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaa----acagcttatatgaaaa 16451112  T
Q  205 caatttaacttcattttatcttttgcta 232  Q
    ||||||||||||||||||||||||||||    
T  16451111 caatttaacttcattttatcttttgcta 16451084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 250
Target Start/End: Complemental strand, 18066217 - 18066069
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| || |||||||||||| |||| |||| |||||| |||||| |||||| |||||||||| ||||||| ||||||   || ||||||  |||    
T  18066217 acttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatga 18066118  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||||||| |||| || |||| || |||||||| ||| |||||    
T  18066117 aaacaatttaactttatttcatattttactgtagaaatagcttctacat 18066069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 2416303 - 2416253
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2416303 aaaacaatttaacttcattttatcttttgctacagaaataacttatacata 2416253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 3611304 - 3611166
Alignment:
Q  116 caacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaa 212  Q
    |||||||||||||| ||||| | ||||||| |||||||| || ||| |||||||||| ||||| | ||||||   || |   ||    ||||||||||||    
T  3611304 caacttatgacattattcataaactgtttttagcttattttcataagttctccaagatagcttgtgaaaacagtctataaactatacaaaaacaatttaa 3611205  T
Q  213 cttcattttatcttttgctatagaaataacttatacata 251  Q
    ||| |||||| ||||||||||||||||||||||||||||    
T  3611204 ctttattttaccttttgctatagaaataacttatacata 3611166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 45229600 - 45229457
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca--tacagcttacgtgaa 202  Q
    ||||||||||  | ||||||||||| |||||||||| ||||||||||||| || ||| ||||| |||| ||||||| ||||||   | | | ||    ||    
T  45229600 acttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaacaatgataacatatacaaa 45229501  T
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||    
T  45229500 aacaatttaacctcattttatcgtttgctatagaaatagcttat 45229457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 43570502 - 43570356
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaa---aacatacagcttacgtga 201  Q
    |||||||||| || ||||||||||||||||| |||| |||| |||||||| || |||  | |||| ||  |||||| ||   ||| || ||||||  |||    
T  43570502 acttatgaaaacagcttatgacattgttcataagctttttt-agcttattttcataagctttccaggatggcttatgaagataacgtatagcttaaatga 43570404  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||||||||||||||| |||| |||||||| || ||||||||    
T  43570403 aaacaatttaacttcattttatattttactatagaattagcttataca 43570356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 4607014 - 4606939
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    |||| ||||| |||||||||||||||||||| ||||| ||| |||||||| || ||| |||||||||| |||||||    
T  4607014 acttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 1625989 - 1625907
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||||| | ||||||||| ||||||| || ||||||||||| ||| || ||| |||||||||| ||||||| ||||||    
T  1625989 acttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaaca 1625907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 26626948 - 26626829
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaac-t 214  Q
    ||||||||||||||||| | |||||||||| ||||| || ||| |||| ||||| ||||||| ||||||   |  ||||||   |||||||||||||| |    
T  26626948 cttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaatttaactt 26626849  T
Q  215 tcattttatcttttgctata 234  Q
    || |||||||||||||||||    
T  26626848 tcgttttatcttttgctata 26626829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 40279355 - 40279274
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||| ||||||||| |||||||||| | |||||||||||| ||| || ||| |||||||| | ||||||| ||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 40279425 - 40279344
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||| ||||||||| |||||||||| | |||||||||||| ||| || ||| |||||||| | ||||||| ||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 41241212 - 41241257
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  41241212 aaaacaatttaacttcattttatcttttcctatagaaatagcttat 41241257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 3673799 - 3673747
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  3673799 tgaaaacaatttaactttattttatattttgttatagaaataactaatacata 3673747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 7928299 - 7928424
Alignment:
Q  124 gacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaacttcattttat 223  Q
    |||||||||||| || ||||||||||||||| || ||| |||||||||| ||| | |  ||| ||| | |||||  || |||||||| | || |||||||    
T  7928299 gacattgttcataagttgttttcagcttattttcataagttctccaagatagcctgt--aaaaataaaacttacacgacaacaatttgatttaattttat 7928396  T
Q  224 cttttgctatagaaataacttatacata 251  Q
    ||||||| ||||||||| ||||| ||||    
T  7928397 cttttgcaatagaaatagcttattcata 7928424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 3932334 - 3932295
Alignment:
Q  207 atttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  3932334 atttaactttattttatcttttgctatagaaataacttat 3932295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 39567892 - 39567845
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  39567892 aaacaatttaactttattttatcttttgttatagaaatatcttataca 39567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 10143162 - 10143112
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  10143162 aaaacagtttgacttaattttatcttttgttatagaaataacttatacata 10143112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 28039316 - 28039393
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa 185  Q
    |||||||| ||| ||||||| |||||||| ||||||||||||||||||  | ||| || ||||||||||||||| ||||    
T  28039316 ttatgaaaacaagttatgac-ttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaa 28039393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 36043993 - 36043857
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| ||||||| |||||||||||| ||||||||| |||| | | || |||  ||||||||| | || || || |||   || ||||||   ||    
T  36043993 acttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaagataactaatgaagacagtttatagcttatacga 36043894  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaa 238  Q
    |||||||||||||  ||||||||||| ||||||||||    
T  36043893 aaacaatttaactcaattttatctttcgctatagaaa 36043857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 42457938 - 42457888
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||||||| |||||||||||  |||||||||    
T  42457938 aaaacaatttaactttattttatcttttactatagaaatagattatacata 42457888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 44119775 - 44119717
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatgataag 258  Q
    ||||| || ||||||| |||||||||||| ||||| |||||||||||||||| ||||||    
T  44119775 gaaaaaaaattaactttattttatcttttactataaaaataacttatacataagataag 44119717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 44600543 - 44600479
Alignment:
Q  189 acagcttacgtgaaaacaatttaacttcattttatctttt--gctatagaaataacttatacata 251  Q
    ||||||||  ||||||| ||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  44600543 acagcttatatgaaaactatttaactttattttatctttttggctatagaaatagcttatacata 44600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 10150747 - 10150695
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||| ||||||| | ||||||||||||  |||||||||||||||||||||    
T  10150747 tgaaaaccatttaacgttattttatcttttattatagaaataacttatacata 10150695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 33981127 - 33981091
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaa 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33981127 aaaacaatttaacttcattttatcttttcctatagaa 33981091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 750759 - 750684
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    ||||||||||  | || |||||||||||||| ||||||||| ||||||||  | ||| |||||||||| |||||||    
T  750759 acttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttat 750684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 2142743 - 2142680
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctcc 168  Q
    |||||||||| ||| || ||||| ||||||||||||||||| |||||||| || ||| ||||||    
T  2142743 acttatgaaaacaagttgtgacaatgttcattagctgtttttagcttattttcataaattctcc 2142680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 9174893 - 9174822
Alignment:
Q  116 caacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||||||||||||| |||| ||||||||||||| || |||  |||  |||| ||||||| ||||||    
T  9174893 caacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaaca 9174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 9395122 - 9395071
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||| ||| |||||||||||| ||||||||| | |||||||||    
T  9395122 tgaaaacaatttagctttattttatctttttctatagaaaaatcttatacat 9395071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 23747295 - 23747244
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||| ||||||| |||||||||||||||| |||| ||||| ||||||||||    
T  23747295 gaaaataatttaaattcattttatcttttgatataaaaatagcttatacata 23747244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 26143726 - 26143769
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||    
T  26143726 aattgaactttattttatcttttgctatagaaatagcttataca 26143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 35378999 - 35379081
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacata 189  Q
    ||||||||| || || ||||| |||||||| || ||||||||||||||| || |||  ||||||||| ||||||| ||||||||    
T  35378999 cttatgaaaacagctgatgac-ttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaacata 35379081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 40837506 - 40837557
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  40837506 tgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 42420374 - 42420421
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    ||||||||||||| | |||||||||||||||||| ||||| |||||||    
T  42420374 aaaacaatttaacgttattttatcttttgctataaaaatagcttatac 42420421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 43199399 - 43199356
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||| ||||||||||||| | |||||||||||||||||    
T  43199399 aatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 4026807 - 4026761
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||| |||||||||| |||||||||||||||||| ||||| ||||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttata 4026761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5133762 - 5133712
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| |||| ||| ||||||||||||| |||||||||| ||||||||||    
T  5133762 aaaacagtttatctttattttatcttttgttatagaaatagcttatacata 5133712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 9195358 - 9195404
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  9195358 aaaacaattaaactttattttatcttttgctttataaataacttata 9195404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 13866879 - 13866829
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||| |||| ||||||||||||||||||||||||  |||||||||    
T  13866879 aaaacagtttgacttaattttatcttttgctatagaaatagtttatacata 13866829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 16398192 - 16398138
Alignment:
Q  116 caacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaa 170  Q
    ||||||||||||||| || | |||||||||||||||||| || ||| ||||||||    
T  16398192 caacttatgacattgctcgtaagctgttttcagcttattttcataagttctccaa 16398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 33941997 - 33941916
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| ||||||||||||  |||||| ||||| ||||| |||||| || |||  ||||||||| ||||||| ||||||    
T  33941997 acttatgaaaacaacttatgaca-agttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaaca 33941916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 12464553 - 12464598
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||| ||| ||||||| |||||    
T  12464553 aaaacaatttaactttattttatctttttctacagaaatagcttat 12464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 29316771 - 29316905
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaactt 215  Q
    |||||||||| |||||| || | |||||||||||||  | ||| |||||||||| |||| || ||||||   || || ||| |||||||||||||||| |    
T  29316771 cttatgacat-gttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaatttaacct 29316869  T
Q  216 cattttatcttttgctatagaaataacttatacata 251  Q
     |||||||||| || || ||| ||| |||| |||||    
T  29316870 tattttatcttctgttaaagatatagcttagacata 29316905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 35459901 - 35459852
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||||| |||| ||||||||||||| |||| ||||| ||||||||    
T  35459901 gaaaacaatttgactttattttatcttttggtatacaaatagcttataca 35459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 41407291 - 41407246
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| ||||||||||||| || ||||||| |||||    
T  41407291 aaaacaatttaactttattttatcttttggtacagaaatagcttat 41407246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 1939410 - 1939458
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||| | ||| |||| ||||||||||||| |||||||||||||||||    
T  1939410 tgaaaatagtttcactttattttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 2195946 - 2195906
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||||||||||| ||||| ||||| |||||    
T  2195946 aatttaacttcattttatctttttctataaaaatagcttat 2195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 3227739 - 3227799
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatgataagc 259  Q
    |||||||||||||||||  |||||| ||||  |||||||| | |||||||| |||||||||    
T  3227739 tgaaaacaatttaactttgttttattttttattatagaaacagcttatacacatgataagc 3227799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 3423846 - 3423898
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||||| |||| ||||||||||||| || | ||||||||||||||||    
T  3423846 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 3423898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 9875559 - 9875587
Alignment:
Q  223 tcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||||||||||||||||    
T  9875559 tcttttgctatagaaataacttatacata 9875587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 11344362 - 11344414
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| ||||  |||||||||||| |||||||||| ||||| ||||    
T  11344362 tgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcata 11344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 11863728 - 11863780
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||  ||||||||||||||| || || ||||| |||||||    
T  11863728 tgaaaacaatttaactctattttatcttttgctgtaaaactaactcatacata 11863780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 13630359 - 13630411
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||| |||| || |||||||||| || ||||||||||||||||||    
T  13630359 tgaaaacagtttgactttatcttatcttttgatagagaaataacttatacata 13630411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 15120270 - 15120223
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||| || ||||||||||||| |||||||||||||||| ||||||||    
T  15120270 cttatggaaacaacttatgacat-gttcattagctgttttaagcttatt 15120223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 18962116 - 18962168
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| |||||||| ||||||||||||| |||| ||||| || |||||||    
T  18962116 tgaaaacagtttaactttattttatcttttgttataaaaatagctaatacata 18962168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 29633064 - 29633016
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| |||| ||| ||| ||||| |||||||||||||||||    
T  29633064 tgaaaacaatttgactttattctattttttgttatagaaataacttata 29633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 32098386 - 32098434
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||| ||| |||| ||||||||||||| |||||||||| ||||||    
T  32098386 tgaaaacactttgactttattttatcttttgttatagaaatagcttata 32098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 36114603 - 36114639
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaa 237  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  36114603 aaaacaatttaactttattttatcttttgttatagaa 36114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 40672874 - 40672926
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||| | |||| ||||||||||||   ||||||||||||||||||||    
T  40672874 tgaaaacaatgtgactttattttatcttttttcatagaaataacttatacata 40672926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 42817454 - 42817502
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||  || |||||||||||||||||| |||||||||||| ||||    
T  42817454 tgaaaacagcttgacttcattttatcttttggtatagaaataacatata 42817502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 8e-27; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 39105551 - 39105404
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaa 203  Q
    |||||||| || ||||||||||||||||| |||| |||| |||||||| || ||| |||||||||| ||||||| ||||||   || ||||||   ||||    
T  39105551 ttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaa 39105452  T
Q  204 acaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||| || ||| |||||||||||| ||||||||||    
T  39105451 acaatttaacttcatttcatatttagctatagaaatagcttatacata 39105404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 9202743 - 9202874
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaactt 215  Q
    ||||||||||||||||| |||||||| ||||||||| || ||| |||| ||||| | ||||| ||||||   ||  |||||  |||||||||||||||||    
T  9202743 cttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactt 9202842  T
Q  216 cattttatcttttgctatagaaataacttata 247  Q
     |||||||||||||||| ||||||| ||||||    
T  9202843 tattttatcttttgctacagaaatagcttata 9202874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 247
Target Start/End: Complemental strand, 7674736 - 7674592
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacat---acagcttacgtga 201  Q
    ||||||| || ||||||||||||| ||| || || ||||||||||||||| ||  || |||||||||| ||||||| |||||||   |  |||||   ||    
T  7674736 acttatggaaacaacttatgacat-gtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataaga 7674638  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||| || ||||||||||||| |||||||||| ||||||    
T  7674637 aaacaatttaaatttattttatcttttggtatagaaatagcttata 7674592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 1465001 - 1465149
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaa--acatacagcttacgtgaa 202  Q
    |||||||||| || |||||| ||||| |||| || ||||||||||||||| ||  || | |||||||| ||||||| |||  || || |||||||   ||    
T  1465001 acttatgaaaacagcttatggcattgctcataagttgttttcagcttattttcacaagtcctccaagatagcttataaaataacttatagcttacacaaa 1465100  T
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    | | ||||||||| |||||||| | ||||||||||||| ||||||||||    
T  1465101 agcgatttaactttattttatcctatgctatagaaatagcttatacata 1465149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 4014429 - 4014554
Alignment:
Q  129 tgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---ta-cagcttacgtgaaaacaatttaacttcattttatc 224  Q
    ||||||| |||||||||||||||||| || ||| |||||||||| ||||||| ||||||   || ||  || |   |||||||| |||||| ||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttcca-aaaacaatctaactttattttatc 4014527  T
Q  225 ttttgctatagaaataacttatacata 251  Q
    |||||||||||||||| ||||||||||    
T  4014528 ttttgctatagaaatagcttatacata 4014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 12425625 - 12425511
Alignment:
Q  140 tgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctataga 236  Q
    |||||||| |||||| || ||| |||||||||| ||||| | ||||||   || ||||||   |||||||||||||||| |||||||||||| ||||| |    
T  12425625 tgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatata 12425526  T
Q  237 aataacttatacata 251  Q
    ||||  |||||||||    
T  12425525 aatagtttatacata 12425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 7985057 - 7984978
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa 185  Q
    |||| |||| || ||| |||| |||||||| |||||||||||||||||| || ||| |||||||||| ||||||| ||||    
T  7985057 cttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 7984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 42583140 - 42583089
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  42583140 gaaaacaatttaactttatttcatcttttgttatagaaataccttatacata 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 10363742 - 10363696
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataactta 245  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  10363742 tgaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 10639943 - 10639897
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||    
T  10639943 aaaacaatttaatttaattttatcttttgctatagaaatagcttata 10639897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 37112338 - 37112388
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||  |||||||||||||| |||||||| ||||||||||    
T  37112338 aaaacaatttaactttgttttatcttttgctgtagaaatagcttatacata 37112388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 40097483 - 40097533
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||  |||||||||| || |||||||||||||||||||||    
T  40097483 aaaacaatttaactctattttatcttctgttatagaaataacttatacata 40097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 3932765 - 3932810
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||    
T  3932765 aaaacaattaaacttcattttatcttttgctataaaaatagcttat 3932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 14932280 - 14932231
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatagattatacat 14932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 33459016 - 33459065
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||||| ||||| ||||||| |||||||||||||||||||||    
T  33459016 aaacaattcaactttattttgtcttttgttatagaaataacttatacata 33459065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 42099867 - 42099928
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    ||||||||||||||||| |||||||||  ||||||| || ||| |||| |||||||||||||    
T  42099867 cttatgacattgttcataagctgtttttggcttattttcataagttcttcaagaaagcttat 42099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 985633 - 985573
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||||||||| ||| |||| ||||||||||||| ||| |||||||| ||||||||    
T  985633 agcttatgtgaaaacagtttgactttattttatcttttgttatggaaataacatatacata 985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 3977396 - 3977333
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctcca 169  Q
    |||||||||| || |||||||||| |||| |||||||| ||||||||||| || |||||||||||    
T  3977396 acttatgaaaacagcttatgacat-gttccttagctgtcttcagcttattttcataatttctcca 3977333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 9927577 - 9927525
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| || | |||||||||||| ||||| ||||||||||||||||    
T  9927577 tgaaaacaatttgacgtaattttatcttttactatacaaataacttatacata 9927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 12460079 - 12460130
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||| |||||| ||||||||||||| |||||||||| ||||||||||    
T  12460079 tgaaaacaatataactt-attttatcttttgttatagaaatagcttatacata 12460130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 12595818 - 12595857
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaa 238  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  12595818 tgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 29117009 - 29117060
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||| ||| |||| ||||||||||||| |||||||||||| ||||||||    
T  29117009 gaaaacagtttgactttattttatcttttgttatagaaataacatatacata 29117060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 39594861 - 39594753
Alignment:
Q  140 tgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctataga 236  Q
    ||||||||||||||| || ||| |||  ||||| | ||||| ||||||   |||| |||| | |||||||||||| ||| |||||||||||| |||||||    
T  39594861 tgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaattta-ctttattttatctttttctataga 39594763  T
Q  237 aataacttat 246  Q
    |||| |||||    
T  39594762 aatagcttat 39594753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 40048359 - 40048410
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||| ||| |||||| ||||||||||||| |||||||| ||||||||||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacata 40048410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 465944 - 465898
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||    
T  465944 aaaacaatttaactttattttatcttttgtcatagaaatagcttata 465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 7853647 - 7853609
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  7853647 aaacaatttaactttattttatcttttgttatagaaata 7853609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 12407733 - 12407791
Alignment:
Q  193 cttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||| ||||||||  || |||| ||||||||||||| |||||||||| ||||||||||    
T  12407733 cttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatacata 12407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 17368764 - 17368683
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| |||||||||||| |||||||  || ||||||||||||||  | |||  ||||||||| ||||||| ||||||    
T  17368764 acttatgaaaacaacttatgaca-tgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaaca 17368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 25461310 - 25461379
Alignment:
Q  117 aacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||||| ||||||||||||||||||||||||| || ||| | | |||||| || |||| ||||||    
T  25461310 aacttatgacat-gttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaaca 25461379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 36796776 - 36796838
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatg 253  Q
    |||||| ||||||| |||||||| | ||||||| ||||| |  ||||||||||||||||||||    
T  36796776 agcttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacatatg 36796838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 40452281 - 40452231
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| |||||||||| |||||||  ||||||||||||||| ||||||||||    
T  40452281 aaaataatttaactttattttattatttgctatagaaatatcttatacata 40452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 41981796 - 41981834
Alignment:
Q  209 ttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  41981796 ttaactttattttatcttttgatatagaaataacttata 41981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 42646905 - 42646855
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||| |||| |||| ||||| ||||||||||    
T  42646905 aaaacaatttaacttaattttatcctttgttataaaaatatcttatacata 42646855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 706448 - 706403
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||  |||||||||||| ||||||||||| ||||||||||    
T  706448 aatttaactatattttatcttttactatagaaatagcttatacata 706403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 7853729 - 7853688
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttc 146  Q
    ||||||| || |||||||||||||||||||| ||||||||||    
T  7853729 acttatggaaacaacttatgacattgttcataagctgttttc 7853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 10303793 - 10303752
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  10303793 tgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 12595530 - 12595579
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||| |||| | || |||||||||||||||||||||||| ||||||||    
T  12595530 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 12595579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 35446045 - 35446000
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||| ||||||||| ||||| |||||    
T  35446045 aaaacaatttaactttattttatcatttgctataaaaatagcttat 35446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 37611198 - 37611278
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||| |||||| |||||| |||||| |||||||||||| |||||  | |||  ||||||||| ||||||| ||||||    
T  37611198 cttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 37787928 - 37788008
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||| |||||| |||||| |||||| |||||||||||| |||||  | |||  ||||||||| ||||||| ||||||    
T  37787928 cttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 37968883 - 37968834
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    |||||||| ||| || ||||||||||||||| |||||||||| |||||||    
T  37968883 tgaaaacactttgacctcattttatcttttgttatagaaatagcttatac 37968834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 42500305 - 42500350
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| |||||    
T  42500305 aaaacaatttaactttattttatcttttgatataaaaatagcttat 42500350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 6582911 - 6582959
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    ||||| ||||||||||||||||| |||||| | |||||||| |||||||    
T  6582911 gaaaaaaatttaacttcattttagcttttgttgtagaaatagcttatac 6582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 7808593 - 7808545
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||  | ||||| ||||||||||| ||||||||||||||||||    
T  7808593 cttatgaaaatagcttataacattgttcataagctgttttcagcttatt 7808545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 18704133 - 18704165
Alignment:
Q  219 tttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||||||||||||||||||||    
T  18704133 tttatcttttgttatagaaataacttatacata 18704165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 27106010 - 27106050
Alignment:
Q  208 tttaacttcattttatcttttgctatagaaataacttatac 248  Q
    |||||||| ||||||||||||| ||||||||| ||||||||    
T  27106010 tttaactttattttatcttttgttatagaaatgacttatac 27106050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 34112867 - 34112815
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||| ||||||| | || ||||||| ||||||||||| ||||||||||    
T  34112867 tgaaaacaacttaactttaattaatcttttactatagaaatagcttatacata 34112815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 34669807 - 34669847
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    |||||||||||| ||||||||||||| | ||||||||||||    
T  34669807 aaaacaatttaatttcattttatcttgttctatagaaataa 34669847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 35135740 - 35135792
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||    
T  35135740 tgaaaatagtttgactttattttatcttttgttatagaaatatcttatacata 35135792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 37794681 - 37794728
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  37794681 cttatgaaaacaacttatgaca-tgttcataagctgttttgagcttatt 37794728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 39128627 - 39128579
Alignment:
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| |||| ||||||||||||| ||||||| || ||||||||||    
T  39128627 aacaatttgactttattttatcttttgttatagaattagcttatacata 39128579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 42569059 - 42569099
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  42569059 gaaaacaattagactttattttatcttttgctatagaaata 42569099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 9093538 - 9093686
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaa 202  Q
    |||||||||  | |||||||||||||| || | |||||||||||||||| |||||| ||||| |||| ||||||| ||||||   || ||||||   |||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  9093638 aacaatttaactttattttatcttttgatatagaaatagcttatccata 9093686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 9559620 - 9559671
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  9559620 gaaaacaatttaaatttattttatcttttgctatagaaataacttatacata 9559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 10728624 - 10728575
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  10728624 tgaaaacaatttaactttattttatcttttgctttagaaataacttatac 10728575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 24476594 - 24476542
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24476594 tgaaaataatttaactacattttatcttttgctatagaaatagcttatacata 24476542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 29274307 - 29274359
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  29274307 tgaaaacaatttgactttattttatcttttgctatagaaatagcttatacata 29274359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 24836278 - 24836329
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  24836278 gaaaacaatttgactttattttatcttttgttatagaaataacttatacata 24836329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 10645409 - 10645455
Alignment:
Q  204 acaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  10645409 acaatttaacttcattttatcgtttgctatagaaatagcttatacat 10645455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 20368162 - 20368243
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| ||||||||||||| |||||| ||||  ||||| |||||| || ||| |||||||||||||||||| ||||||    
T  20368162 acttatgaaaacaacttatgacat-gttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaaca 20368243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 31624178 - 31624097
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| || |||||||||| |||||| ||||||||||| |||||| || |||||||||||||| ||| ||| ||||||    
T  31624178 acttatgaaaacagcttatgacat-gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaaca 31624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 103445 - 103396
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  103445 tgaaaacaacttaacttcatattatcttttgctatagaaatagcttatac 103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 9912172 - 9912237
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaa 170  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||||||| || ||| ||||||||    
T  9912172 acttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagttctccaa 9912237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 507210 - 507160
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| |||||| ||||||||||||| ||||||||||| |||||||||    
T  507210 aaaacaatctaactttattttatcttttgttatagaaataatttatacata 507160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 34430447 - 34430524
Alignment:
Q  110 tgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||| || |||||||||||  |||| |||| ||||||||||||| || ||| |||||||||| ||||||| ||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaaca 34430524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 31583693 - 31583645
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||||||    
T  31583693 tgaaaacaatttgacttcattttatctcttgttatagaaatagcttata 31583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 264362 - 264315
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||| ||||||||| ||||||||||||||| |||||||| ||||||    
T  264362 gaaaacgatttaactttattttatcttttgctttagaaatagcttata 264315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2455348 - 2455281
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaaga 172  Q
    |||||||||| |||||||| |||||||| || || ||||||||||||||| ||  || ||||||||||    
T  2455348 acttatgaaaacaacttattacattgtttataagttgttttcagcttattttcacaacttctccaaga 2455281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 20671944 - 20671995
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||| ||||||||||||| | |||||||| ||||||||||    
T  20671944 gaaaacaatttgactttattttatcttttgatctagaaatagcttatacata 20671995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 2023725 - 2023755
Alignment:
Q  217 attttatcttttgctatagaaataacttata 247  Q
    |||||||||||||||||||||||||||||||    
T  2023725 attttatcttttgctatagaaataacttata 2023755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 5554861 - 5554895
Alignment:
Q  217 attttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| |||||||||||||||||||||    
T  5554861 attttatcttttgttatagaaataacttatacata 5554895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 6654605 - 6654555
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||| |||| |||||||  |||| |||||||||||||||||||||    
T  6654605 aaaacaatttgacttaattttattatttgttatagaaataacttatacata 6654555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 33068657 - 33068691
Alignment:
Q  217 attttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| |||||||||||||||||||||    
T  33068657 attttatcttttgttatagaaataacttatacata 33068691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 33736824 - 33736778
Alignment:
Q  205 caatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| ||||||| || || |||||||||||||||||||||    
T  33736824 caatttaactttattttatgttatgttatagaaataacttatacata 33736778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 2455068 - 2455031
Alignment:
Q  117 aacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  2455068 aacttatgacattgttcataacctgttttcagcttatt 2455031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 5884949 - 5884990
Alignment:
Q  212 acttcattttatcttttgctatagaaataacttatacatatg 253  Q
    |||||||||||| ||||| ||||||||||| |||||||||||    
T  5884949 acttcattttattttttgttatagaaataatttatacatatg 5884990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 8147692 - 8147647
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||| ||||| |||||||||||||||||| ||||| |||||    
T  8147692 aaaacaattcaactttattttatcttttgctataaaaatagcttat 8147647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 18076186 - 18076141
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||    
T  18076186 aaaacaatttaaccttattttctcttttgctataaaaataacttat 18076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 31624249 - 31624200
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||||||  | ||||||||||||| |||||||||| ||||||||    
T  31624249 gaaaacaatttaaacttattttatcttttgttatagaaatagcttataca 31624200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 31813236 - 31813175
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    ||||||| ||||||||| ||| |||||||||||||| || ||  |||||||||| |||||||    
T  31813236 cttatgagattgttcataagccgttttcagcttattttcatatgttctccaagatagcttat 31813175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 2206580 - 2206532
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||  |||| ||||||||||||| |||| ||||||||||||||    
T  2206580 aaaacaattatactttattttatcttttgttataaaaataacttataca 2206532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 5564222 - 5564258
Alignment:
Q  214 ttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  5564222 ttcattttatcttttgctatataaatagcttatacat 5564258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 8349744 - 8349792
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||||||||| ||||||||||||| || |||||||  |||||||    
T  8349744 aaaacaatttaactttattttatcttttgttagagaaatagtttataca 8349792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 10749306 - 10749357
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| |||||||||| ||||||||||||  ||||||||| |||||||||||    
T  10749306 tgaaaataatttaactttattttatcttttattatagaaat-acttatacata 10749357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 13907672 - 13907592
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||| || ||| ||||||||||||  || | ||||||| ||||| || ||||||||||||||  |||||| ||||||    
T  13907672 ttatgaaaacagcttctgacattgttcacaagttattttcagtttattttcataatttctccaagatggcttatgaaaaca 13907592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 29940799 - 29940739
Alignment:
Q  188 tacagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatac 248  Q
    |||||||||  ||||||||| || |||| ||||||||||||| |||||||| | |||||||    
T  29940799 tacagcttaaatgaaaacaaattgactttattttatcttttgttatagaaaaagcttatac 29940739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 31672044 - 31672012
Alignment:
Q  217 attttatcttttgctatagaaataacttataca 249  Q
    ||||||||||||| |||||||||||||||||||    
T  31672044 attttatcttttgttatagaaataacttataca 31672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 34544548 - 34544580
Alignment:
Q  219 tttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||||||||||||||||||||    
T  34544548 tttatcttttgttatagaaataacttatacata 34544580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 51695487 - 51695615
Alignment:
Q  116 caacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacat---acagcttacgtgaaaacaatttaa 212  Q
    |||||||| ||||||||||| |||| ||||||||||||| || ||| |||||||||| ||||||| |||||||   | | ||||   ||||||||||| |    
T  51695487 caacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaacaattt-a 51695585  T
Q  213 cttcattttatcttttgctatagaaataac 242  Q
    ||| |||||||||||| |||||||||||||    
T  51695586 ctttattttatcttttactatagaaataac 51695615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 24915034 - 24915170
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaa 203  Q
    |||||||| |||||||||||||| ||||| |||| |||||| |||||| ||  || |||||||||| ||||||| ||||||   || ||| ||    |||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  204 acaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||| |||||||||| |||||||||||||    
T  24915134 acaatttaactttattttatcttctgctatagaaata 24915170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 37842337 - 37842485
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| || || ||||||| |||||| ||| |||||||||||||| |  ||| |||| ||||| ||||||| ||||||   || ||||||   ||    
T  37842337 acttatgaaaacatctaatgacat-gttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcga 37842435  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    | ||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  37842436 acacagtttaactttatttcatcttttgctatagaaatagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 31517722 - 31517859
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||| ||| ||||| ||||||| |||||| |||||||||||||||||| || |||  ||||||||| || |||| || |||   || ||||||  |||    
T  31517722 acttatcaaaacaactcatgacat-gttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatga 31517820  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaata 240  Q
    || ||||||||||| ||||||||||||| | ||||||||    
T  31517821 aatcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 34952292 - 34952155
Alignment:
Q  117 aacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaac 213  Q
    ||||| |||||||||| |  ||| |||||||||||||| || ||| |||||   || ||||||| ||||||   |||||||||   ||||||||||||||    
T  34952292 aacttgtgacattgtttagaagcagttttcagcttattttcataagttctctttgatagcttatgaaaacaacttacagcttattcgaaaacaatttaac 34952193  T
Q  214 ttcattttatcttttgctatagaaataacttatacata 251  Q
    || |||||| ||| |||| |||||||| ||||||||||    
T  34952192 tttattttaacttctgctctagaaatagcttatacata 34952155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 49517062 - 49517012
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  49517062 tgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 13809988 - 13809943
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  13809988 aaaacaatttaactttattttatcttttgctaaagaaataacttat 13809943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 15784406 - 15784275
Alignment:
Q  117 aacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaacttc 216  Q
    ||||||||||||||||||  || |||||| |||||||| ||  || |||||||||| ||||||| |||||   |||||||   ||||||||||||||||     
T  15784406 aacttatgacattgttcacaagttgtttttagcttattttcacaagttctccaagatagcttat-aaaac---cagcttatacgaaaacaatttaacttt 15784311  T
Q  217 attttatc-ttttgctatagaaataacttatacata 251  Q
    |||||| | |||| || |||||||| ||||||||||    
T  15784310 attttacctttttactttagaaatagcttatacata 15784275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 27820332 - 27820400
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||| |||||||||||| |||| ||||||||||||| || ||| |||||||||| ||||||| ||||||    
T  27820332 cttacgacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaaca 27820400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 3887613 - 3887762
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| || ||||||||||||||||| ||||||||| | |||||| || ||| |||||| ||  ||||| | ||| ||   || ||||     ||    
T  3887613 acttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcctagctagcttgtaaaatcagcttatagctcgtaaga 3887712  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||  |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  3887713 aattaatttaactttattttatcttttgctattgaaatagcttatacata 3887762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 9656713 - 9656600
Alignment:
Q  131 ttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttt 227  Q
    ||||| ||||||||| |||||||| || |||||  |||| || ||||||| || |||   || ||||||  |||||| |||||||||| ||||||| |||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttt 9656614  T
Q  228 tgctatagaaataa 241  Q
    ||||||||||||||    
T  9656613 tgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 33339507 - 33339550
Alignment:
Q  208 tttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  33339507 tttaacttcattttatcttttggtatagaaatagcttatacata 33339550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 41163083 - 41163134
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  41163083 gaaagcaatttaacttcattttatcttttgcaataaaaataactcatacata 41163134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7028282 - 7028232
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||| ||||||| ||||||||||||||||||||||||  |||||||||    
T  7028282 aaaacaacttaactttattttatcttttgctatagaaatagtttatacata 7028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 14737783 - 14737829
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataactta 245  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||    
T  14737783 tgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 45975759 - 45975697
Alignment:
Q  125 acattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||| ||||| |||||||||||||||||| || ||| |||||||||| ||||||| ||||||    
T  45975759 acattattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaca 45975697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 49557125 - 49557083
Alignment:
Q  207 atttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  49557125 atttaactttattttatcttttgttatagaaataacttataca 49557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 9572192 - 9572237
Alignment:
Q  205 caatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||    
T  9572192 caatttaactttattttatcttttgctatagaaatagctaatacat 9572237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 251
Target Start/End: Original strand, 27146247 - 27146378
Alignment:
Q  116 caacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaactt 215  Q
    |||||||||||||||||||| ||||||||||| |||| | || ||| |||| ||||| || ||| |||||   | | ||||   ||||  ||||||| ||    
T  27146247 caacttatgacattgttcataagctgttttcaacttactttcgtaagttcttcaagatagttta-caaaa---ataacttatacgaaactaatttaaatt 27146342  T
Q  216 cattttatcttttgctatagaaataacttatacata 251  Q
     ||||||||||||||| |||||||| ||||||||||    
T  27146343 tattttatcttttgctgtagaaataccttatacata 27146378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 37517274 - 37517319
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  37517274 aaaacaatttaactttattttatattttggtatagaaataacttat 37517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 1432505 - 1432453
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacatatg 253  Q
    ||||||||| ||||  |||||||||||| ||||||||||| ||||||||||||    
T  1432505 aaaacaattgaactctattttatcttttactatagaaatagcttatacatatg 1432453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 4549858 - 4549806
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| |||||||||||| ||||||||||||| |||||||||| ||| ||||||    
T  4549858 tgaagacaatttaactttattttatcttttgttatagaaatagcttgtacata 4549806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 11211110 - 11211062
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||| |||||||||| ||||||||||||| | |||||||||||||||    
T  11211110 tgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 15360886 - 15360834
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||||| |||||||    
T  15360886 tgaaaacagtttgactttattttatcttttgttatagaaataactaatacata 15360834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 23544718 - 23544770
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||||| | ||||||||| ||||||||||    
T  23544718 tgaaaacaatttgacttaattttatctttttccatagaaatagcttatacata 23544770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 38503462 - 38503518
Alignment:
Q  121 tatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagct 177  Q
    ||||||||||||||| || ||||||||||||||| || ||| |||||||||| ||||    
T  38503462 tatgacattgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 48748661 - 48748712
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  48748661 tgaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacata 48748712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 50319284 - 50319232
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||| || |||| ||||||||||||| |||||||||| ||||||||||    
T  50319284 tgaaaacaacttgactttattttatcttttgttatagaaatagcttatacata 50319232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 4777381 - 4777412
Alignment:
Q  217 attttatcttttgctatagaaataacttatac 248  Q
    ||||||||||||||||||||||||||||||||    
T  4777381 attttatcttttgctatagaaataacttatac 4777412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 27140552 - 27140425
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaacttcat 218  Q
    |||||||||| || ||| || |||||||||||||||  | |||  |||||| || ||||||| ||||||    |||||  | ||||||||||||  | ||    
T  27140552 cttatgacat-gtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaaca----gcttatataaaaacaatttaatattat 27140458  T
Q  219 tttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| ||||||||||||||| |||||    
T  27140457 tttatcttttgttatagaaataacttacacata 27140425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 36151584 - 36151635
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||| ||||||||||||| ||| |||||| ||||||||||    
T  36151584 gaaaacaatttgactttattttatcttttgttattgaaatagcttatacata 36151635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 37473492 - 37473425
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaaga 172  Q
    |||| ||||| |||||||||||||| ||||| |||| ||| ||||||||| || ||| ||||||||||    
T  37473492 acttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaaga 37473425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 38018345 - 38018412
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaaga 172  Q
    |||||||||||||  ||| ||||||||||||||| | ||||||||||||| || | | ||||||||||    
T  38018345 acttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaattctccaaga 38018412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 15477568 - 15477530
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaat 239  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  15477568 aaaacaatttaactttattttatcttttactatagaaat 15477530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 34619458 - 34619508
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| | ||||||||||||| |||||||||  ||||||||||    
T  34619458 aaaacaatttaaccttattttatcttttgttatagaaatggcttatacata 34619508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 37841989 - 37841939
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||||||||| |||||||| |||| ||||| |||| |||||||||    
T  37841989 gaaaacaatttaactttattttatcatttgttataggaatagcttatacat 37841939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 45145216 - 45145166
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||  | |||||||||||||||||| ||||| ||||||||||    
T  45145216 aaaacaatttaatattattttatcttttgctataaaaatagcttatacata 45145166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 1509959 - 1509995
Alignment:
Q  117 aacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1509959 aacttatgacat-gttcattagctgttttcagcttatt 1509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 4699597 - 4699645
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  4699597 acttatgaaaacaacttatgaca-tgttcataagctgtttttagcttatt 4699645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 36641860 - 36641819
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||| |||| ||||||||||||| |||||||||||||||||    
T  36641860 aatttgactttattttatcttttgttatagaaataacttata 36641819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 47432086 - 47432041
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||| ||||| ||||| |||||    
T  47432086 aaaacaatttaactttattttatctttttctataaaaatagcttat 47432041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 1255509 - 1255561
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||||| ||||||||| ||||||| ||||||||||| ||| ||||||    
T  1255509 tgaaaagaatttgacttcatttcatcttttactatagaaatagcttctacata 1255561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 4200221 - 4200173
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||| || |||| ||||||||||||| |||| ||||||||||||    
T  4200221 tgaaaacaacttgactttattttatcttttgttataaaaataacttata 4200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 6659679 - 6659643
Alignment:
Q  215 tcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||||||||||||  |||||||||    
T  6659679 tcattttatcttttgctatagaaatagtttatacata 6659643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 7274017 - 7274069
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||| |||||||| |||| ||||||| ||||||||    
T  7274017 tgaaaacaatttgactttatttcatcttttgttataaaaataacatatacata 7274069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 11941350 - 11941302
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||  | ||||| ||||||||||| ||||||||||||||||||    
T  11941350 cttatgaaaatagcttataacattgttcataagctgttttcagcttatt 11941302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 15687152 - 15687192
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||||| ||||||| ||||| ||||||||||    
T  15687152 gaaaacaatttaactttattttatattttgttatagaaata 15687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 15687427 - 15687467
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  15687427 gaaaacaatttaacttaactttatcatttgctatagaaata 15687467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 17269242 - 17269190
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||  |||||| | |||||||||||||||||||    
T  17269242 tgaaaacaatttgactttattttcacttttgttctagaaataacttatacata 17269190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 39803967 - 39804015
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||| |||| ||||| ||||||| | ||||||||||||||||||    
T  39803967 aaacaatttgactttattttgtcttttgttgtagaaataacttatacat 39804015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 40357964 - 40358016
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||  ||| |||||||||| ||||||||||    
T  40357964 tgaaaacaatttgactttattttatccattgttatagaaatagcttatacata 40358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 21367756 - 21367674
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| || ||||||||||||||||  |||||||||||||||||| || ||| |||||||||| ||||||| ||||||    
T  21367756 acttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaaca 21367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 2128263 - 2128381
Alignment:
Q  129 tgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaacttcattttatctttt 228  Q
    ||||||| |||||||||||||||||| || ||  ||||  ||||  |||||| ||||||    ||||||   ||||||||||||||| ||||||||||||    
T  2128263 tgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaaca----gcttacagtaaaacaatttaactttattttatctttt 2128358  T
Q  229 gctatagaaataacttatacata 251  Q
    | |||||||||| ||||||||||    
T  2128359 gttatagaaatagcttatacata 2128381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 10101554 - 10101601
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10101554 tgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 10212479 - 10212526
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10212479 tgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 32095271 - 32095317
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  32095271 aaaacaatttaacttaattttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 30956706 - 30956751
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  30956706 aaaacaatttaactttattttatcttttgctatagaaatagcttat 30956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 30972518 - 30972563
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  30972518 aaaacaatttaactttattttatcttttgctatagaaatagcttat 30972563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 42809303 - 42809242
Alignment:
Q  189 acagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||  ||||||||||||||||  ||||||||||||| |||||||||| |||||||||    
T  42809303 acagcttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 402526 - 402671
Alignment:
Q  108 tatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaa 204  Q
    ||||||| || ||||||||||||||||| |||||||||||||||| | ||  || |||| ||||| || |||| ||||||   || | ||||   |||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  205 caatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| || |  ||||||||| ||||||||||| ||||||||||    
T  402626 caatttaaattta-attatctttttctatagaaatagcttatacata 402671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 3182440 - 3182492
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||||| |||||||| |||||||||||||    
T  3182440 tgaaaacaatttgactttattttatctttttctatagaagtaacttatacata 3182492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 36783339 - 36783453
Alignment:
Q  129 tgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacat---acagcttacgtgaaaacaatttaacttcattttatct 225  Q
    ||||||| |||||||||||||||||  || ||||| |||||| | ||||||| ||||||    | || |||  |||||||||||| |||| |||||||||    
T  36783339 tgttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatct 36783438  T
Q  226 tttgctatagaaata 240  Q
    |||| ||||||||||    
T  36783439 tttggtatagaaata 36783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 44061103 - 44061151
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  44061103 aaaacaatttaaccttattttatcttttgctatagaaatagcttataca 44061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 48364957 - 48365009
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||||||| ||| |||||||||||||||||    
T  48364957 tgaaaacaatttgactttattttatcttttgttatcgaaataacttatacata 48365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 15304425 - 15304472
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  15304425 tgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 35394494 - 35394561
Alignment:
Q  120 ttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||||||||| ||||||||||| |||||| || ||| |||| ||||| ||||||| ||||||    
T  35394494 ttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaaca 35394561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 1395663 - 1395609
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacatatg 253  Q
    |||||| ||||| |||| ||||||||||||| |||||||||| ||||||||||||    
T  1395663 tgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatg 1395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 46778307 - 46778353
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  46778307 aaaacaatttaactttattttatctcttgctatagaaatagcttata 46778353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 584036 - 583991
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  584036 aaaacaatttaactttattttatcattttctatagaaataacttat 583991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 45433017 - 45433058
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  45433017 tgaaaacaatttaacttcattttatcttttcttatagaaata 45433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 36887503 - 36887463
Alignment:
Q  210 taacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  36887503 taacttaattttatcttttgttatagaaataacttatacat 36887463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 45541659 - 45541580
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa 185  Q
    |||||||||| || |||||||||| |||||| |||||||||||| ||||| || ||| || ||||||| ||||||| ||||    
T  45541659 acttatgaaaacagcttatgacat-gttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 10357425 - 10357378
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||| |||||||| | ||||||||||||| ||||||||||||||||    
T  10357425 tgaaaaaaatttaacattattttatcttttgttatagaaataacttat 10357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 24085319 - 24085452
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtg- 200  Q
    |||||||||| || ||||||  | |||||||  ||||||||||||||||| ||  || |||||||||| ||||||  ||||||   || |||||| |||     
T  24085319 acttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttatgtga 24085418  T
Q  201 aaaacaatttaacttcattttatcttttgctata 234  Q
    ||||||| || |||| |||||||| |||||||||    
T  24085419 aaaacaaattcactttattttatcgtttgctata 24085452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 31403349 - 31403302
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||| |||||||||||||||||||||| ||| |||||| ||||||    
T  31403349 gaaaacattttaacttcattttatcttttgatatggaaatagcttata 31403302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 37389272 - 37389197
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttat 180  Q
    |||||||||| |||||||||||||||||||   |||| ||| |||||||| || ||| | |||||||| |||||||    
T  37389272 acttatgaaaacaacttatgacattgttcaaatgctgcttttagcttattctcataagtactccaagatagcttat 37389197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 33405206 - 33405286
Alignment:
Q  163 ttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||| ||||| ||||||| ||||||   || ||||||  ||||||||| ||||||| |||||| |||||||||||||||||    
T  33405206 ttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 36189556 - 36189506
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||||||||  | ||||||| ||||||||||    
T  36189556 aaaacaatttaactttattttatcttttgtaagagaaatagcttatacata 36189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 42808969 - 42808923
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||||||| ||||||||||||| |||||||| | ||||||    
T  42808969 aaaacaatttaactttattttatcttttgttatagaaacagcttata 42808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 849652 - 849607
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| |||||||||||| | |||||||| ||||||    
T  849652 aaaacaatttaactttattttatcttttccgatagaaatgacttat 849607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 5436069 - 5436024
Alignment:
Q  205 caatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||||    
T  5436069 caatttaacttcattcaatctttttctatagaaatagcttatacat 5436024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 10704653 - 10704686
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctata 234  Q
    ||||||||||||| ||||||||||||||||||||    
T  10704653 aaaacaatttaacatcattttatcttttgctata 10704686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 33883018 - 33882969
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||| ||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  33883018 aaaataatttcactttattttatcttttgttatagaaataatttatacat 33882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 37155000 - 37154967
Alignment:
Q  218 ttttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||||||||||| ||||||||    
T  37155000 ttttatcttttgctatagaaataacatatacata 37154967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 37200355 - 37200322
Alignment:
Q  218 ttttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||||||||||||| ||||||||    
T  37200355 ttttatcttttgctatagaaataacatatacata 37200322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 45264347 - 45264396
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||| ||||||| | |||||||||| ||||||||||| ||||||    
T  45264347 acttatgaaaacaacttacggcattgttcataagctgttttcaccttatt 45264396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 48397636 - 48397587
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||| |||| ||||||||||||  |||| |||||||||||||||    
T  48397636 aaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 3194250 - 3194294
Alignment:
Q  110 tgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  3194250 tgaaaacaacttatgacattgatcataagctgtttttagcttatt 3194294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 4990635 - 4990687
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| | ||| ||||||||||||| |||| || ||||||||||||||||||    
T  4990635 tgaaaaaagtttgacttcattttatcctttgatacagaaataacttatacata 4990687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 22214759 - 22214811
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| ||||||| |||| |||||||| |||| ||||||||||| |||||||||    
T  22214759 tgaatacaatttcactttattttatcctttgttatagaaataatttatacata 22214811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 34638043 - 34638091
Alignment:
Q  200 gaaaacaatttaacttca-ttttatcttttgctatagaaataacttata 247  Q
    |||||||||||||||| | ||||||||||| ||||||||||| ||||||    
T  34638043 gaaaacaatttaactttaattttatctttttctatagaaatagcttata 34638091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 38462273 - 38462225
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||| ||| |||| ||||||||||||| |||||||||| ||||||    
T  38462273 tgaaaacagtttgactttattttatcttttggtatagaaatagcttata 38462225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 39602291 - 39602339
Alignment:
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| || ||||||||| ||||||||||| ||||| ||||    
T  39602291 aacaatttaactttatgttatctttttctatagaaatagcttatgcata 39602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 40122830 - 40122882
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||| |||| ||||||||||||| ||| |||||| ||||||||||    
T  40122830 tgaaaacagtttgactttattttatcttttgttattgaaatagcttatacata 40122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 44374722 - 44374774
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||||||| || ||| ||| ||||||||||    
T  44374722 tgaaaacaatttgactttattttatcttttgttaaagatatagcttatacata 44374774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 49586994 - 49587042
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||| ||| |||| ||||||||||||| |||||||||| ||||||    
T  49586994 tgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 251
Target Start/End: Complemental strand, 10114578 - 10114430
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| |||||||| |||||  ||||  ||||||||||||||||| || ||  |||||||| | |||| || ||||||   || ||||||    |    
T  10114578 acttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttatacca 10114479  T
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  10114478 aaacaattcaactt-attttatcttttgctatagaaatagcttatacata 10114430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 31884648 - 31884532
Alignment:
Q  139 ctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctatag 235  Q
    |||||||||||||||| | ||||  |||||| || ||||||| ||||||   || ||||||  ||||||||||| || || ||||||| ||||| |||||    
T  31884648 ctgttttcagcttatt-tattaaactctccatgatagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatag 31884550  T
Q  236 aaataacttatacatatg 253  Q
    ||||||||||||||||||    
T  31884549 aaataacttatacatatg 31884532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 32840967 - 32841016
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||    
T  32840967 acttatgaaaacaacttatgacattgttcataagttgttttcagcttatt 32841016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 1112853 - 1112793
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| |||||||||||||||| | ||||||||||||| |||||||||| | ||||||||    
T  1112853 agcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacata 1112793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 13652207 - 13652155
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||||||||||    
T  13652207 tgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacata 13652155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 13710850 - 13710798
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||||||||||    
T  13710850 tgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacata 13710798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 14280479 - 14280531
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||| || ||||||||||||||||||||||||  |||||||||    
T  14280479 tgaaaacaatttaatttaattttatcttttgctatagaaataggttatacata 14280531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 42597393 - 42597341
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||||||| |||||||||| ||||||||||    
T  42597393 tgaaaacaattttactttattttatcttttgttatagaaatagcttatacata 42597341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 29205798 - 29205759
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  29205798 aaaacaatttaacttcattttatctttttctatagaaata 29205759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 240
Target Start/End: Original strand, 42043425 - 42043464
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  42043425 aaaacaatttaactgcattttatcttttgctatagaaata 42043464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 1930032 - 1929991
Alignment:
Q  210 taacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  1930032 taactttattttatctttttctatagaaataacttatacata 1929991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 3537110 - 3537159
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||||||||    
T  3537110 gaaaacaatttgactttattttatcttttgctatagaaattgcttataca 3537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 35374451 - 35374492
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  35374451 tgaaaacaatttaactttattttatctttcgctatagaaata 35374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 4558790 - 4558738
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| |||||||||| ||||||||||||  |||||||||| ||||||||||    
T  4558790 tgaaaataatttaactttattttatcttttattatagaaatagcttatacata 4558738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 8407722 - 8407678
Alignment:
Q  110 tgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||    
T  8407722 tgaaaacaacttatgacattgttcataagctgttctcagcttatt 8407678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 12361184 - 12361136
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| ||||||||||||||||   |||||||||||||||||    
T  12361184 tgaaaacaatttgacttcattttatctttatttatagaaataacttata 12361136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 40280283 - 40280331
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| |||| ||||||||||||| | |||||||||||||||    
T  40280283 tgaaaacaattttactttattttatcttttgttgtagaaataacttata 40280331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 1930109 - 1930042
Alignment:
Q  120 ttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||||||||| |||||||||||||||||| ||  ||  || |||||| ||||||| ||||||    
T  1930109 ttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaaca 1930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 15247760 - 15247807
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||||| ||||||||||||||||||||||| | |||||| ||||||    
T  15247760 ttatgaaaacaacttatgacattgttcattagtttttttcaacttatt 15247807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 16210964 - 16211015
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||| |||||| |||||||| ||| ||||||||||| |||||||||    
T  16210964 tgaaaacaatgtaactttattttatcatttactatagaaatagcttatacat 16211015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 18356302 - 18356259
Alignment:
Q  208 tttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| |||||||||||||||||||||| |||||| |||||    
T  18356302 tttaactttattttatcttttgctatagaaacaacttacacata 18356259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 26215479 - 26215436
Alignment:
Q  208 tttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||    
T  26215479 tttaactttattttatcttttgttatagaaatagcttatacata 26215436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 37444494 - 37444545
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||| | ||||||||||| ||||| |||| ||||||||||    
T  37444494 gaaaacaatttaactttactttatcttttgttatagtaatagcttatacata 37444545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 41475139 - 41475190
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||  |||||||||||||||||| || || ||||||||||    
T  41475139 gaaaacaatttaactgtattttatcttttgctataaaattagcttatacata 41475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 43504835 - 43504757
Alignment:
Q  109 atgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacat 188  Q
    |||||| ||||||| ||| ||||| || ||||||||||||||||||  | ||| |||||||||| ||||||| |||||||    
T  43504835 atgaaaacaacttacgac-ttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacat 43504757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 1074122 - 1074080
Alignment:
Q  205 caatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||    
T  1074122 caatttaacttcattgtatcttttactatagaaatagcttata 1074080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7646196 - 7646146
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||| |||||  |||||||||| ||||||||||    
T  7646196 aaaacaatttaactttattttaccttttcttatagaaatagcttatacata 7646146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 14482192 - 14482142
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||| |||| ||||||||||||| ||||||||||  |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacata 14482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 27465364 - 27465314
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||| ||| | || |||||||||||||||||||||||| |||||||||    
T  27465364 gaaaacagtttgatttgattttatcttttgctatagaaatagcttatacat 27465314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 10120845 - 10120780
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaa 170  Q
    |||||||||| || |||||||||||  ||||  ||||||||||||||||| || ||| ||||||||    
T  10120845 acttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaa 10120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 27028915 - 27028838
Alignment:
Q  110 tgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||| || |||| |||||| ||||| |||| ||||||||||||| || |||  ||||||||| ||||||| ||||||    
T  27028915 tgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaaca 27028838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 32976407 - 32976358
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||| ||||||||| ||||||||||||| |||||||||| | |||||||    
T  32976407 aaaactatttaactttattttatcttttgttatagaaatagcgtatacat 32976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 40728498 - 40728543
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||| ||| |||| ||||||||||||| ||||||||||||||||    
T  40728498 aaaacagtttgactttattttatcttttgttatagaaataacttat 40728543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 7514570 - 7514518
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| ||| | ||||||  |||||||||||||||| ||||||||||    
T  7514570 tgaaaacaattgaacattattttagtttttgctatagaaatagcttatacata 7514518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 9928228 - 9928196
Alignment:
Q  219 tttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||| |||||||||||||||||||||    
T  9928228 tttatcttttgttatagaaataacttatacata 9928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 12976198 - 12976158
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||||||| ||||||| |||||||||||||||| |||||    
T  12976198 aatttaactttattttatattttgctatagaaatagcttat 12976158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 20672824 - 20672757
Alignment:
Q  119 cttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| |||||| |||||||||||||||||| || |||  |||||| || ||||||| ||||||    
T  20672824 cttatgacat-gttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 26820178 - 26820142
Alignment:
Q  212 acttcattttatcttttgctatagaaataacttatac 248  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  26820178 actttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 29056069 - 29056121
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||| || |||| ||||||||||||||| ||||| || ||||||||||    
T  29056069 tgaaaacaaattgactttattttatcttttgctctagaagtagcttatacata 29056121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 29699242 - 29699194
Alignment:
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||| ||| |||| ||||||||||||| |||||||||||||| ||||||    
T  29699242 aacattttgactttattttatcttttgttatagaaataacttgtacata 29699194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 31716208 - 31716283
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtct-taatttctccaagaaagcttat 180  Q
    |||| ||||| || ||||||||||| ||||| |||| ||||||||||||| ||| ||| |||||||||| |||||||    
T  31716208 acttttgaaaacagcttatgacattcttcataagcttttttcagcttatt-tctataacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 31915347 - 31915399
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||| ||||||||| |||||| ||| ||||||||||    
T  31915347 tgaaaacaatttgactttattctatcttttgttatagatatagcttatacata 31915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 42622878 - 42622838
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||||| |||||||| |||||||| ||||||    
T  42622878 gaaaacaatttaacttgattttatcatttgctatcgaaata 42622838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 43368683 - 43368730
Alignment:
Q  106 cttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    ||||||||| |||||||||||| |||||||||||| |||||| ||||||    
T  43368683 cttatgaaaacaacttatgaca-tgttcattagctattttcaacttatt 43368730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 3968277 - 3968324
Alignment:
Q  203 aacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||    
T  3968277 aacaatttaaatttattttatcttttgctatagaaataacttatacat 3968324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 28165156 - 28165031
Alignment:
Q  129 tgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatct 225  Q
    ||||||| ||||||||||| ||||||  | |||  |||||| || ||||||| || |||   || ||||||  | |||||||||| ||||||||||||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct 28165057  T
Q  226 tttgctatagaaataacttatacata 251  Q
    |||| |||||||| ||||||||||||    
T  28165056 tttgttatagaaagaacttatacata 28165031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 40688993 - 40689105
Alignment:
Q  131 ttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttt 227  Q
    ||||| ||||||||| |||||||| || ||| || |||| || ||||||| || |||   || ||||||  |||||| |||||||||| |||||||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttt 40689092  T
Q  228 tgctatagaaata 240  Q
    |||||||||||||    
T  40689093 tgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 39591545 - 39591593
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  39591545 tgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 43152982 - 43153030
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 44989658 - 44989741
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgtttt-cagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| |||||| ||||||||||||  ||||||||| ||||||||| || |||||||| ||||| | ||||| ||||||    
T  44989658 acttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaagatatcttatgaaaaca 44989741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 33678869 - 33678787
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||||| |||||||| ||||||||||| || |||||||| |||||| ||  || || ||||||| ||||||| ||||||    
T  33678869 acttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagttttccaagatagcttatgaaaaca 33678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 34036006 - 34035924
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    ||||||||||  ||||||||||||||||||| || |||||||| |||||| ||  || ||||| |||| ||||||| ||||||    
T  34036006 acttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaaca 34035924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 34083606 - 34083644
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34083606 aaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 36517650 - 36517588
Alignment:
Q  123 tgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaa 185  Q
    ||||||||||||| |||| ||||||| ||||| || |||||||||||||| ||||||| ||||    
T  36517650 tgacattgttcataagctattttcagtttattttcataatttctccaagatagcttatgaaaa 36517588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 20881717 - 20881766
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| ||||||||||||||||||| ||| || |||||||    
T  20881717 aaacaatttaacttcgttttatcttttgctatagatatagctcatacata 20881766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 21853197 - 21853242
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  21853197 aaacaatttaactttattttatcttttgtaatagaaataacttata 21853242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 30180042 - 30180001
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  30180042 gaaaacaatttaactttattttatcttttgctatcgaaataa 30180001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 39968009 - 39967878
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtga 201  Q
    |||||||||| || |||||| |||||||||| ||||||||||| |||||| || | | |||||  ||| ||||||| ||||||   || ||||     ||    
T  39968009 acttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacga 39967910  T
Q  202 aaacaatttaacttcattttatcttttgctat 233  Q
    ||||||||||| || |||||||||||||||||    
T  39967909 aaacaatttaagtttattttatcttttgctat 39967878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 48470034 - 48469989
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  48470034 aaaacaatttaacttaattttatcttttgctgtagaaatagcttat 48469989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 35536099 - 35536047
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||| || |||||||||| ||||||||||    
T  35536099 tgaaaacaatttgactttattttatcttatgttatagaaatagcttatacata 35536047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 28178961 - 28178910
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    |||||||||| | |||| ||||||||||||| |||||||||| |||||||||    
T  28178961 tgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 33894629 - 33894563
Alignment:
Q  184 aacatacagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||| ||||||  |||||||| ||| |||| ||||||||||||| |||||||||| ||||||||||    
T  33894629 aacataaagcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacata 33894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 44216861 - 44216900
Alignment:
Q  207 atttaacttcattttatcttttgctatagaaataacttat 246  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  44216861 atttaactttattttatcttttgctatagaaagaacttat 44216900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 47177683 - 47177578
Alignment:
Q  147 agcttattgtcttaatttctccaagaaagcttatcaaaaca---tacagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataact 243  Q
    |||||||| || ||| |||||||||| ||||| | ||||||   || ||||||  |||||||||||||||||  |||| | ||||| |||||||||| ||    
T  47177683 agcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgttttgtattttgatatagaaatacct 47177584  T
Q  244 tataca 249  Q
    ||||||    
T  47177583 tataca 47177578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 1432063 - 1432097
Alignment:
Q  217 attttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||| |||||||||||||||||||||    
T  1432063 attttatcttttgttatagaaataacttatacata 1432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 6824908 - 6824858
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||  || ||||||||| |||||||||| ||||||||||    
T  6824908 aaaacaatttaactttgttctatcttttgttatagaaatagcttatacata 6824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 8960707 - 8960757
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||||||||| |||||||| |||||||||| |||| | ||||||||    
T  8960707 aaaacaatttaactttattttatcatttgctataggaatagcatatacata 8960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 27121654 - 27121716
Alignment:
Q  189 acagcttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||||  |||||||||||| |||| |||||||| |||  |||||||||| ||||||||||    
T  27121654 acagcttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacata 27121716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 28613614 - 28613664
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||||||  |||||||||||| |||| ||||| ||||||||||    
T  28613614 aaaacaatttaactttgttttatcttttgttataaaaatagcttatacata 28613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 39279951 - 39279913
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  39279951 aaacaatttaacttaattttatcttttgcaatagaaata 39279913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 44241842 - 44241800
Alignment:
Q  209 ttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||    
T  44241842 ttaactttattttatctgttgttatagaaataacttatacata 44241800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 48157200 - 48157250
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||| |||| ||||||||||||  ||||||||||| |||||||||    
T  48157200 aaaacaatttcactttattttatcttttattatagaaataagttatacata 48157250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 48507712 - 48507674
Alignment:
Q  201 aaaacaatttaacttcatt-ttatcttttgctatagaaa 238  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  48507712 aaaacaatttaacttcattcttatcttttgctatagaaa 48507674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 389782 - 389831
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||||||||||||| ||||| |||| || |||| |||||||||||||||    
T  389782 aaaacaatttaactttattttttcttctgttataaaaataacttatacat 389831  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 2767248 - 2767297
Alignment:
Q  191 agcttacgtgaaaacaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||| ||||||||||||||  || ||||||||||||| ||||||||||    
T  2767248 agcttatgtgaaaacaatttatatttattttatcttttgttatagaaata 2767297  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 2894815 - 2894758
Alignment:
Q  193 cttacgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||| |||||||| || ||||| | ||||||||||| |||||||||| |||||||||    
T  2894815 cttacttgaaaacagttcaactttaatttatcttttgttatagaaatagcttatacat 2894758  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 5006587 - 5006640
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacatat 252  Q
    |||||||| ||| |||| ||||||||||||| ||||| |||| |||||||||||    
T  5006587 tgaaaacagtttgactttattttatcttttgttataggaatagcttatacatat 5006640  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 11048115 - 11048067
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttatt 154  Q
    |||||| ||| ||||||||||||| |||||| ||||||||||||||||||    
T  11048115 acttatcaaaacaacttatgacat-gttcataagctgttttcagcttatt 11048067  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 37832218 - 37832267
Alignment:
Q  200 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 249  Q
    ||||||||| |||||| ||||||| ||||||||||||||||  |||||||    
T  37832218 gaaaacaatctaactttattttatattttgctatagaaatagtttataca 37832267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 46078137 - 46078092
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||||||||||||  ||||||||||| ||||| |||||||||||    
T  46078137 aaaacaatttaactttgttttatctttttctataaaaataacttat 46078092  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 119899 - 119855
Alignment:
Q  202 aaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||||||||||| |||||||||||| || |||||||| |||||    
T  119899 aaacaatttaactttattttatcttttcctgtagaaatagcttat 119855  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 1417256 - 1417204
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| ||||||||||||| |||| |||||  |||||||||    
T  1417256 tgaaaacaatttgactttattttatcttttgttatataaatagtttatacata 1417204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 7244694 - 7244642
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||| ||| ||||  |||||||||||| |||||||||| ||||||||||    
T  7244694 tgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacata 7244642  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 7453483 - 7453527
Alignment:
Q  206 aatttaacttcattttatcttttgctatagaaataacttatacat 250  Q
    ||||| |||| |||||||||||||||||||||| | |||||||||    
T  7453483 aatttgactttattttatcttttgctatagaaaaatcttatacat 7453527  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 19022568 - 19022648
Alignment:
Q  107 ttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaaca 187  Q
    |||||||| |||||||||||| | ||||| || ||| |||| |||||| || ||| |||||||| | ||||||| ||||||    
T  19022568 ttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaaca 19022648  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 19719094 - 19719047
Alignment:
Q  105 acttatgaaagcaacttatgacattgttcattagctgttttcagcttat 153  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||    
T  19719094 acttatgaaaacaacttatgaca-tgttcataaactgttttcagcttat 19719047  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 22283824 - 22283863
Alignment:
Q  201 aaaacaatttaacttcattttatcttttgctatagaaataa 241  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  22283824 aaaacaatttaactttattttatc-tttgctatagaaataa 22283863  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 23918949 - 23918897
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||||||  ||||| |||||||| |||||    
T  23918949 tgaaaacaatttgactttattttatcttttgtaatagagataacttacacata 23918897  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 45004753 - 45004717
Alignment:
Q  204 acaatttaacttcattttatcttttgctatagaaata 240  Q
    |||||||||||| |||||||||||||||||| |||||    
T  45004753 acaatttaactttattttatcttttgctataaaaata 45004717  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 45813258 - 45813306
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttata 247  Q
    ||||||||| || |||| ||||||||||||| |||||||||| ||||||    
T  45813258 tgaaaacaagttgactttattttatcttttggtatagaaatagcttata 45813306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 51560 - 51507
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacatat 252  Q
    ||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||    
T  51560 tgaaaacaatttaactttattttatattttgttataaaaataacttatacatat 51507  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 21287 - 21408
Alignment:
Q  125 acattgttcattagctgttttcagcttattgtcttaatttctccaagaaagcttatcaaaacatacagcttacgtgaaaacaatttaacttcattttatc 224  Q
    |||||||| || | ||||||| || ||||| || |||||||||||| | ||||||| ||||||    |||||   |||||||||||||||| ||||||||    
T  21287 acattgttgataaactgtttt-agtttattttcataatttctccaatatagcttatgaaaaca----gcttatacgaaaacaatttaactttattttatc 21381  T
Q  225 ttttgctatagaaataacttatacata 251  Q
    |||| ||||| ||||| ||||||||||    
T  21382 ttttcctataaaaatagcttatacata 21408  T

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Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 27568 - 27516
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||||||| |||| |||||||||| || |||||||||||||||||||||    
T  27568 tgaaaacaatttgactttattttatcttctgttatagaaataacttatacata 27516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 84207 - 84254
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttat 246  Q
    |||||||||||| || | ||||||||||||||||| ||||||||||||    
T  84207 tgaaaacaattttacattattttatcttttgctattgaaataacttat 84254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 9853 - 9905
Alignment:
Q  199 tgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 251  Q
    |||||||  ||| |||| ||||||| ||||| |||||||||||||||||||||    
T  9853 tgaaaactttttgacttaattttattttttgttatagaaataacttatacata 9905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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