View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_high_61 (Length: 275)
Name: NF11651_high_61
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_high_61 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 45530391 - 45530638
Alignment:
| Q |
18 |
gttatgcatctttttcttctcaataattgttaactagaaaacatctagcttactgcagatttaggatctgtgaccacacacattccattcatttctccta |
117 |
Q |
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| T |
45530391 |
gttatgcatctttttcttctcaataattgttaactagaaaacatctagcttactgcagatttaggatctgtgaccacacacattccattcatttctccta |
45530490 |
T |
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| Q |
118 |
tactatttttgaagtagaagaagtgccaaataacccaaaatatattggctttagctattgaaatcaatttagtgtgtgctttatctccaaatacatatca |
217 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
45530491 |
tactatttttgaagtagaagaagtgacaaataacccaaaatatattggctttagctattgaaatcaatttagtgtgtgctttatctccaaatacatacca |
45530590 |
T |
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| Q |
218 |
ttgcttgatcagttgctcgtgtaacacaacataactattgctcctatg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45530591 |
ttgcttgatcagttgctcgtgtaacacaacataactattgctcttatg |
45530638 |
T |
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