View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_high_80 (Length: 240)
Name: NF11651_high_80
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_high_80 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 6036910 - 6037131
Alignment:
| Q |
1 |
tatcgtaatgaattcgacgttaaactttgaagtttaaatagttattgttcttttgtggtctttcctcaggtgattgtctcggtggttagaagccgagcta |
100 |
Q |
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| T |
6036910 |
tatcgtaatgaattcgacgttaaactttgaagtttaaatagttattgttcttttgtggtctttcctcaggtgattgtctcggtggttagaagtcgagcta |
6037009 |
T |
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| Q |
101 |
tggagaaacaaaagaacaagccaagcctactgagagagagtttttcctgggtatattctcctgcaacaagagaattatgtgttaccgggaaaatggaacc |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
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| T |
6037010 |
tggagaaacaaaagaacaagccaggcctactgagagagagtttttcctgggtatattctcctacaacaagagaattatgtgttactgggaaaatggaacc |
6037109 |
T |
|
| Q |
201 |
aaaggcaaaggagggaggtaat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
6037110 |
aaaggcaaaggagggaggtaat |
6037131 |
T |
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