View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_low_103 (Length: 206)
Name: NF11651_low_103
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_low_103 |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: scaffold0010 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 253573 - 253763
Alignment:
| Q |
1 |
tttctaatctcctcagtgacnnnnnnnttaatcaaaggatcctcttttactgtggagtttcctctttcttcaaactttggaagtctaatctgtcttaaag |
100 |
Q |
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| T |
253573 |
tttctaatctcctcagtgacaaaaaaattaatcaaaggatcctcttttactgtggagtttcctctttcttcaaactttggaagtctaatctgtcttaaag |
253672 |
T |
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| Q |
101 |
caacattagcactgtgaagaggcctaactatttcatcctctaaatatttcttatctaaggttatgctcttgtttttctccatttcttgttc |
191 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
253673 |
caacattagcactatgaagaggcctaactatttcatcctctaaatatttcttatctaaggttatgctcttgtttttctccatttcttgttc |
253763 |
T |
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