View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11651_low_13 (Length: 626)
Name: NF11651_low_13
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11651_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 38 - 617
Target Start/End: Original strand, 41104850 - 41105425
Alignment:
| Q |
38 |
cttaatatatccatccatctcaaaaacgcgatgatgatatagggacatcaaattaatattaaaatattgtattccttaatattaattctatcatatttgt |
137 |
Q |
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| T |
41104850 |
cttaatatatccatccatctcaaaaacgcgatgatgatatagggatatcaaattaatatt--------gtattccttaatattaattctatcatatttgt |
41104941 |
T |
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| Q |
138 |
ggaagaatttaagtcgttacaaaagtcacaaacaatacattatacatgtttgagacgaaagtatacaaattcaaaata----ggtagaactatcttgttt |
233 |
Q |
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| T |
41104942 |
ggaagaatttaagtcgttacaaaagtcacaaacaatacattatacatgtttgagacgaaagtatacaaattcaaaatatataggtagaactatcttgttt |
41105041 |
T |
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| Q |
234 |
gaattgcctacctatgtaaaaatcaaattgatgtttatatactaaaaagaatattgatagtttttgcactatctgtatacataaatgtgtctaattatag |
333 |
Q |
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| T |
41105042 |
gaaatgtctacctatgtaaaaatcaaattgatgtttatatactaaaaagaatattgatagtttttgcactatctgtatacataaatgtgtctaaatatag |
41105141 |
T |
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| Q |
334 |
attattgaatccagaagaagtgttataaagcatcactatgtcgattctctataatcttttgaagttcttgaggcttacatggcaatgcaatagcaccctt |
433 |
Q |
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| T |
41105142 |
attgttgaatccagaagaagtgttataaagcatcactatgtcgattctctataatcttttgaagttcttgaggcttacatggcaatgcaatagcaccctt |
41105241 |
T |
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| Q |
434 |
ttgttgataaccatactcatccttagcttgctccaatagtttcatgaaatgaggatttgttaagtaatccaactcaagaacaaatctctttgtttcttca |
533 |
Q |
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| T |
41105242 |
ttgttgataaccatactcatccttagcttgctccaatagtttcatgaaatgaggatttcttaagtaatccaactcaagaacaaatctctttgtttcttca |
41105341 |
T |
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| Q |
534 |
ccttgcattgcaataaccgcaaaaaacccttcaggaacagttgtttctgtttcactctcttcatcatcaatgtctctgcttctc |
617 |
Q |
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| T |
41105342 |
ccttgcattgcaataaccgcaaaaaacccttcaggaacagttgtttctgtttcactctcttcatcatcaatgtctctgattctc |
41105425 |
T |
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