View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11651_low_31 (Length: 418)

Name: NF11651_low_31
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11651_low_31
NF11651_low_31
[»] chr7 (14 HSPs)
chr7 (65-408)||(48244478-48244821)
chr7 (99-393)||(48240648-48240946)
chr7 (21-64)||(1797413-1797456)
chr7 (21-64)||(48804636-48804679)
chr7 (23-64)||(19914817-19914858)
chr7 (23-64)||(43925465-43925506)
chr7 (23-64)||(45447923-45447964)
chr7 (21-64)||(4195315-4195358)
chr7 (22-64)||(11607084-11607126)
chr7 (23-60)||(14650274-14650311)
chr7 (23-64)||(21530701-21530742)
chr7 (23-64)||(22993482-22993523)
chr7 (27-64)||(39420791-39420828)
chr7 (23-64)||(47341829-47341870)
[»] chr2 (17 HSPs)
chr2 (240-408)||(38172161-38172328)
chr2 (21-64)||(7747224-7747267)
chr2 (23-66)||(41032020-41032063)
chr2 (23-64)||(8410081-8410122)
chr2 (23-64)||(18902645-18902686)
chr2 (23-64)||(44945544-44945585)
chr2 (21-64)||(2550818-2550861)
chr2 (21-64)||(42770764-42770807)
chr2 (22-60)||(32028367-32028405)
chr2 (22-64)||(44773215-44773257)
chr2 (23-64)||(10026731-10026772)
chr2 (23-60)||(21180429-21180466)
chr2 (23-64)||(22593085-22593126)
chr2 (23-60)||(24179525-24179562)
chr2 (23-60)||(38005356-38005393)
chr2 (23-60)||(39201623-39201660)
chr2 (28-64)||(20612656-20612692)
[»] chr3 (17 HSPs)
chr3 (20-64)||(6462362-6462406)
chr3 (21-64)||(25294910-25294953)
chr3 (21-66)||(29135861-29135906)
chr3 (23-64)||(47471782-47471823)
chr3 (23-62)||(39849024-39849063)
chr3 (21-64)||(42412888-42412931)
chr3 (21-60)||(49543473-49543512)
chr3 (22-64)||(29762270-29762312)
chr3 (23-64)||(7328794-7328835)
chr3 (23-64)||(10040507-10040548)
chr3 (23-64)||(13167563-13167604)
chr3 (27-64)||(26207921-26207958)
chr3 (23-64)||(37092621-37092662)
chr3 (23-60)||(48341974-48342011)
chr3 (23-60)||(54261180-54261217)
chr3 (24-60)||(13893880-13893916)
chr3 (20-60)||(29127873-29127913)
[»] scaffold0002 (3 HSPs)
scaffold0002 (23-64)||(523-564)
scaffold0002 (23-64)||(139384-139425)
scaffold0002 (21-57)||(319382-319418)
[»] chr4 (18 HSPs)
chr4 (20-64)||(33647676-33647720)
chr4 (21-64)||(1446781-1446824)
chr4 (21-64)||(29895742-29895785)
chr4 (23-60)||(1940889-1940926)
chr4 (23-64)||(3574561-3574602)
chr4 (23-64)||(6032755-6032796)
chr4 (23-60)||(34667717-34667754)
chr4 (23-60)||(41339510-41339547)
chr4 (23-60)||(52950041-52950078)
chr4 (21-64)||(27248383-27248426)
chr4 (21-64)||(41162995-41163038)
chr4 (25-64)||(55920989-55921028)
chr4 (22-64)||(7741880-7741922)
chr4 (23-60)||(13073497-13073534)
chr4 (23-64)||(14567206-14567247)
chr4 (23-60)||(24166409-24166446)
chr4 (23-64)||(27531772-27531813)
chr4 (23-64)||(47078413-47078454)
[»] chr1 (14 HSPs)
chr1 (20-60)||(10173084-10173124)
chr1 (21-64)||(2981045-2981088)
chr1 (20-64)||(46929850-46929894)
chr1 (21-64)||(11398002-11398045)
chr1 (29-64)||(25165353-25165388)
chr1 (21-64)||(41743224-41743267)
chr1 (21-64)||(49078065-49078108)
chr1 (22-60)||(5855477-5855515)
chr1 (22-64)||(40288592-40288634)
chr1 (23-64)||(8763942-8763983)
chr1 (23-64)||(15238222-15238263)
chr1 (23-60)||(43959937-43959974)
chr1 (24-60)||(32151039-32151075)
chr1 (20-64)||(41696710-41696754)
[»] chr8 (9 HSPs)
chr8 (21-64)||(2467231-2467274)
chr8 (21-60)||(22810038-22810077)
chr8 (23-64)||(38922529-38922570)
chr8 (21-64)||(14666184-14666227)
chr8 (23-60)||(583772-583809)
chr8 (20-57)||(7673766-7673803)
chr8 (27-64)||(17981395-17981432)
chr8 (23-64)||(24837196-24837237)
chr8 (23-60)||(44893393-44893430)
[»] chr6 (13 HSPs)
chr6 (21-64)||(13468887-13468930)
chr6 (21-64)||(21898602-21898645)
chr6 (22-64)||(2271415-2271457)
chr6 (22-64)||(13036118-13036160)
chr6 (20-64)||(15643940-15643984)
chr6 (20-64)||(24671978-24672022)
chr6 (23-66)||(17115012-17115055)
chr6 (23-61)||(29444880-29444918)
chr6 (23-64)||(5253338-5253379)
chr6 (23-64)||(5759582-5759623)
chr6 (23-60)||(19230672-19230709)
chr6 (23-64)||(21016866-21016907)
chr6 (23-60)||(29333253-29333290)
[»] chr5 (12 HSPs)
chr5 (21-64)||(19572675-19572718)
chr5 (23-64)||(5732035-5732076)
chr5 (23-64)||(6767166-6767207)
chr5 (20-60)||(24498938-24498978)
chr5 (21-60)||(23383603-23383642)
chr5 (25-64)||(28856928-28856967)
chr5 (25-64)||(28857079-28857118)
chr5 (23-64)||(7866532-7866573)
chr5 (23-64)||(8513470-8513511)
chr5 (23-60)||(25417298-25417335)
chr5 (23-60)||(35403627-35403664)
chr5 (23-64)||(42086278-42086319)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-60)||(68474-68511)
[»] scaffold0005 (2 HSPs)
scaffold0005 (23-64)||(271189-271230)
scaffold0005 (23-64)||(250128-250169)
[»] scaffold0072 (1 HSPs)
scaffold0072 (337-408)||(30864-30935)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-60)||(8823-8862)
[»] scaffold0209 (1 HSPs)
scaffold0209 (23-60)||(12532-12569)
[»] scaffold0376 (1 HSPs)
scaffold0376 (24-64)||(12623-12663)


Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 65 - 408
Target Start/End: Original strand, 48244478 - 48244821
Alignment:
Q  65 ttgaaacaaagacattggaacaaaatttctttcatttcaaactcaattttaaccaaacaattttacaatatccaatacattgatcccacaacagatattt 164  Q
    |||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48244478 ttgaaacaaagacattggaacaaaaaaaaattcatttcaaactcaattttaaccaaacaattttacaatatctaatacattgatcccacaacagatattt 48244577  T
Q  165 tacagtgccaaagctggagtgcagggacattttcgattgttgatctatgcaacactagccaccaagtgcaacatgcattgtagggatggaaccatctttt 264  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48244578 tgcagtgccaaagctggagtgtagggacattttcgattgttgatctatgcaacactagccaccaagtgcaacaggcattgtagggatggaaccatctttt 48244677  T
Q  265 tgaggaatttgctttatgttattttccatcctctcgattggtgttttgattgttacgacctcttttattatgtttttgcagtctcttgtactcagcctct 364  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48244678 agaggaatttgctttatgttattttccatcctctcgatcggtgttttgattgttacgacctcttttattatgtttttgcagtctcttgtactcagcctct 48244777  T
Q  365 ttctcatcatccgaaaattctacttcatcggacacctcttcatc 408  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  48244778 ttctcatcatccaaaaattctgcttcatcggacacctcttcatc 48244821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 99 - 393
Target Start/End: Original strand, 48240648 - 48240946
Alignment:
Q  99 tttcaaactcaattttaaccaaacaattttacaatatccaatacattgatcccacaacagatattttacagtgccaaagctggagtgcagggacatttt- 197  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||     
T  48240648 tttcaaactcaattttaagcaaacaattttacaatatccaatacattgaacctacaacagatattttacactgccaaagctggagtgcagggacattttt 48240747  T
Q  198 cgattgttgatctatgcaacactagccaccaagtgcaacatgca----ttgtagggatggaaccatctttttgaggaatttgctttatgttattttccat 293  Q
    ||||||||||||||| |||||||| |||||||||||||||  ||    ||||||||||||||||||||||| |||||| ||||||| |||| ||||||||    
T  48240748 cgattgttgatctat-caacactatccaccaagtgcaacaaacagacattgtagggatggaaccatcttttagaggaacttgctttctgttgttttccat 48240846  T
Q  294 cctctcgattggtgttttgattgttacgacctcttttattatgtttttgcagtctcttgtactcagcctctttctcatcatccgaaaattctacttcatc 393  Q
    ||||| ||| ||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  48240847 cctcttgatcggtattttgattgttacgacctcttttattctgttttcgcagtctctggtactcagcctctttctcatcatccgaaaattctgcttcatc 48240946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 1797456 - 1797413
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  1797456 gatacgtccttggaaggagctccttgccactggagcccaagcaa 1797413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 48804679 - 48804636
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  48804679 gatacgtccttggaaggagctccttgccactggagcccaagcaa 48804636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 19914817 - 19914858
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  19914817 tacgtccttggaaggagctccttgccactggagcccaagcaa 19914858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 43925506 - 43925465
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  43925506 tacgtccttggaaggagctccttgccactggagcccaagcaa 43925465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 45447964 - 45447923
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  45447964 tacgtccttggaaggagctccttgccactagaacccaagcaa 45447923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 4195315 - 4195358
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||    
T  4195315 gatacgtccttggcaggagctccttgccactggagcccaagcaa 4195358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 11607126 - 11607084
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||||||  |||||||||| ||||||||||||    
T  11607126 atacgtccttggaaggagttccttgccactggagcccaagcaa 11607084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 14650311 - 14650274
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  14650311 tacgtccttggaaggagctccttgccactagagtccaa 14650274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 21530742 - 21530701
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
T  21530742 tacgtccttggaaggagctccttgccactggagccgaagcaa 21530701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 22993482 - 22993523
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||| ||||||||    
T  22993482 tacgtccttggaaggagctccttgccactggagtccaagcaa 22993523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 39420828 - 39420791
Alignment:
Q  27 tccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  39420828 tccttgaaaggagctccttgccactagagcccaagcaa 39420791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 47341870 - 47341829
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| |||| |||||||||| ||||||||||||    
T  47341870 tacgtccttggaatgagctccttgccactggagcccaagcaa 47341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 38172161 - 38172328
Alignment:
Q  240 cattgtagggatggaaccatctttttgaggaatttgctttatgttattttccatcctctcgattggtgttttgattgttacgacctcttttattatgttt 339  Q
    |||||||| |||||||||||||||| |||||| ||||||  |||| ||||||||||||  | | |||  |||||||||| |||||||||||||| |||||    
T  38172161 cattgtagtgatggaaccatcttttagaggaacttgcttcctgttgttttccatcctcctg-tcggtactttgattgtttcgacctcttttattttgttt 38172259  T
Q  340 ttgcagtctcttgtactcagcctctttctcatcatccgaaaattctacttcatcggacacctcttcatc 408  Q
    |  ||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||| |||||    
T  38172260 taccagtctcttgtactcggcctctttctcgtcatccgaaaattcttcttcatcagacacctcctcatc 38172328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 7747267 - 7747224
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  7747267 gatacgtccttggaaggagctccttgccactggagcccaagcaa 7747224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 41032020 - 41032063
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaatt 66  Q
    |||||||||||||||||| |||||||||| ||||||||||||||    
T  41032020 tacgtccttggaaggagctccttgccactggagcccaagcaatt 41032063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 8410122 - 8410081
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  8410122 tacgtccttggaaggagctccttgccactggagcccaagcaa 8410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 18902645 - 18902686
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  18902645 tacgtccttggaaggagctccttgccactggagcccaagcaa 18902686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 44945585 - 44945544
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  44945585 tacgtccttggaaggagctccttgccacttgagcccaagcaa 44945544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 2550861 - 2550818
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||    
T  2550861 gatacgtccttgtaaggagctccttgccactggagcccaagcaa 2550818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 42770764 - 42770807
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| | |||||||| ||||||||||||    
T  42770764 gatacgtccttggaaggagctctttgccactggagcccaagcaa 42770807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 32028405 - 32028367
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  32028405 atacgtccttggaagcagctccttgccactagagcccaa 32028367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 44773257 - 44773215
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  44773257 atacgtccttgaaaggagcgccttgccactagagtccaagcaa 44773215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 10026731 - 10026772
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  10026731 tacgtccttggaaggagctccttgccattggagcccaagcaa 10026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 21180429 - 21180466
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  21180429 tacgtccttggaaggagctccttgccactggagcccaa 21180466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22593126 - 22593085
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| |||| |||||||    
T  22593126 tacgtccttggaaggagctccttgccactggagcacaagcaa 22593085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 24179562 - 24179525
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| | |||||||||||||||||    
T  24179562 tacgtccttggaaggagctctttgccactagagcccaa 24179525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 38005393 - 38005356
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  38005393 tacgtccttggaaggagctccttgccactggagcccaa 38005356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 39201623 - 39201660
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  39201623 tacgtccttggaaggagctccttgccactatagcccaa 39201660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20612656 - 20612692
Alignment:
Q  28 ccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  20612656 ccttggaaggagctccttgccactggagcccaagcaa 20612692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6462406 - 6462362
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  6462406 agatacgtccttggaaggagctccttgccactagagcccaagcaa 6462362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 25294953 - 25294910
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  25294953 gatacgtccttggaaggagctccttgccactggagcccaagcaa 25294910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 29135906 - 29135861
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaatt 66  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||    
T  29135906 gatacgtccttggaagaagctccttgccactggagcccaagcaatt 29135861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 47471823 - 47471782
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  47471823 tacgtccttggaaggagctctttgccactagagcccaagcaa 47471782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 39849063 - 39849024
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagc 62  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  39849063 tacgtccttggaaggagctccttgccactggagcccaagc 39849024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 42412888 - 42412931
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||| | ||||||||||||    
T  42412888 gatacgtccttggaaggagctccttgccattggagcccaagcaa 42412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 49543512 - 49543473
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  49543512 gatacgtccttggaaggagctccttgccactaaagcccaa 49543473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 29762270 - 29762312
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  29762270 atacatccttggaaggagctccttgccactggagcccaagcaa 29762312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 7328835 - 7328794
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||| | ||||||||||||||| |||||||    
T  7328835 tacgtccttggaaggaactccttgccactagagcacaagcaa 7328794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 10040548 - 10040507
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  10040548 tacgtccttagaaggagctccttgccactggagcccaagcaa 10040507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 13167563 - 13167604
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  13167563 tacgtccttggaaggagctccttgccactaaatcccaagcaa 13167604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 26207921 - 26207958
Alignment:
Q  27 tccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  26207921 tccttggaaggagctccttgccactggagcccaagcaa 26207958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 37092621 - 37092662
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||| ||| |||||||||| ||||||||||||    
T  37092621 tacgtccttggaagaagctccttgccactggagcccaagcaa 37092662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 48342011 - 48341974
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  48342011 tacgtccttggaaggagctccttgccactggagcccaa 48341974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 54261217 - 54261180
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  54261217 tacgtccttggaaggagctccttgccactggagcccaa 54261180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 13893916 - 13893880
Alignment:
Q  24 acgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  13893916 acgtccttggaaggagctccttgccactggagcccaa 13893880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 29127913 - 29127873
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||||||| | |||||||||| ||||||||    
T  29127913 agatacgtccttggaaggatctccttgccactggagcccaa 29127873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 564 - 523
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  564 tacgtccttggaaggagctccttgccactagagcccaagcaa 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 139425 - 139384
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  139425 tacgtccttggaaggagctccttgccactaaatcccaagcaa 139384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 319418 - 319382
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcc 57  Q
    |||||||||||||||||||| |||||||||| |||||    
T  319418 gatacgtccttggaaggagctccttgccactggagcc 319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 33647720 - 33647676
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  33647720 agatacgtccttgaaaggagctccttgccactagagcccaagcaa 33647676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 1446824 - 1446781
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  1446824 gatacgtccttggaaggagctccttgccactggagcccaagcaa 1446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 29895785 - 29895742
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  29895785 gatacgtccttggaaggagctccttgccactggagcccaagcaa 29895742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 1940889 - 1940926
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1940889 tacgtccttggaaggagctccttgccactagagcccaa 1940926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 3574561 - 3574602
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  3574561 tacgtccttggaaggagctccttgccactggagcccaagcaa 3574602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 6032755 - 6032796
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  6032755 tacgtccttggaaggagctccttgccactggagcccaagcaa 6032796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 34667717 - 34667754
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||    
T  34667717 tacgtccttggaaggagctccttgccactagagcccaa 34667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 41339510 - 41339547
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41339510 tacgtccttggaaggagctccttgccactagagcccaa 41339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 52950078 - 52950041
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||    
T  52950078 tacgtccttggaaggagctccttgccactagagcccaa 52950041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 27248426 - 27248383
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| | |||||||| ||||||||||||    
T  27248426 gatacgtccttggaaggagctcgttgccactggagcccaagcaa 27248383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 41162995 - 41163038
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||    
T  41162995 gatacgtccttggaaggagctccttgtcactggagcccaagcaa 41163038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 55921028 - 55920989
Alignment:
Q  25 cgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  55921028 cgtccttggaaggagctccttgccactggagcccaagcaa 55920989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 7741922 - 7741880
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  7741922 atacgtacttgaaaggagctccttgccactagagcccaagcaa 7741880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 13073534 - 13073497
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| | |||||||||||||||||    
T  13073534 tacgtccttggaaggagctcattgccactagagcccaa 13073497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 14567247 - 14567206
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| |||| |||||||||| ||||||||||||    
T  14567247 tacgtccttggaatgagctccttgccactggagcccaagcaa 14567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 24166446 - 24166409
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  24166446 tacgtccttggaaggagctccttgccactggagcccaa 24166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 27531772 - 27531813
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||| ||||||||    
T  27531772 tacgtccttggaaggagctccttgccactggagtccaagcaa 27531813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 47078454 - 47078413
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| || |||||||||    
T  47078454 tacgtccttggaaggagctccttgccactggaacccaagcaa 47078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 10173084 - 10173124
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  10173084 agatacgtccttggaaggagcaccttgccactggagcccaa 10173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 2981045 - 2981088
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  2981045 gatacgtccctggaaggagctccttgccactagagcccaagcaa 2981088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 46929850 - 46929894
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||    
T  46929850 agatacgtctttggaaggagcttcttgccactagagcccaagcaa 46929894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 11398002 - 11398045
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||    
T  11398002 gatacatccttggaaggagctccttgccactggagcccaagcaa 11398045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 25165388 - 25165353
Alignment:
Q  29 cttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||| |||||||||||||||||||||||    
T  25165388 cttggaaggagctccttgccactagagcccaagcaa 25165353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 41743267 - 41743224
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||  ||||||||||||    
T  41743267 gatacgtccttggaaggagctccttgccaccggagcccaagcaa 41743224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 49078108 - 49078065
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||    
T  49078108 gatacgtccttagaaggagctccttgccactggagcccaagcaa 49078065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 5855515 - 5855477
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  5855515 atacgtccttggaaggagctccttgccactggagcccaa 5855477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 40288592 - 40288634
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||| |||| |||||||||| ||||||||||||    
T  40288592 atacgtccttggaaagagctccttgccactcgagcccaagcaa 40288634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 8763983 - 8763942
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||  ||||||||||||    
T  8763983 tacgtccttggaaggagctccttgccacgggagcccaagcaa 8763942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 15238222 - 15238263
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  15238222 tacgtccttggaaggagctccttgccattggagcccaagcaa 15238263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 43959937 - 43959974
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  43959937 tacgtcattggaaggagcaccttgccactggagcccaa 43959974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 32151039 - 32151075
Alignment:
Q  24 acgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  32151039 acgtccttggaaggagctccttgccactggagcccaa 32151075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 41696710 - 41696754
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||||||||| | |||||||||||| | ||||||    
T  41696710 agatacgtccttggaaggagctcattgccactagagtctaagcaa 41696754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 2467231 - 2467274
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  2467231 gatacgtccttggaaggagctccttgccactggagcccaagcaa 2467274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 22810077 - 22810038
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22810077 gatacgtccttggaaggagctccttgccactagagcccaa 22810038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 38922529 - 38922570
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  38922529 tacgtccttggaaggagctccttgccactggagcccaagcaa 38922570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 14666184 - 14666227
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||    
T  14666184 gatacgtccttggaatgagctccttgccactggagcccaagcaa 14666227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 583809 - 583772
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  583809 tacgtccttggaagtagctccttgccactagagcccaa 583772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7673766 - 7673803
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcc 57  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  7673766 agatacgtccttggaaggagctccttgccactggagcc 7673803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 17981432 - 17981395
Alignment:
Q  27 tccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17981432 tccttggaaggagctccttgccactggagcccaagcaa 17981395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 24837237 - 24837196
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||| |||||||||||| |||||||||| ||||||||||||    
T  24837237 tacgtacttggaaggagctccttgccactggagcccaagcaa 24837196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 44893393 - 44893430
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  44893393 tacgtccttggaaggagctccttgccactggagcccaa 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 13468930 - 13468887
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  13468930 gatacgtccttggaaggagctccttgccaccagagcccaagcaa 13468887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 21898645 - 21898602
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  21898645 gatacgtccttggaaggagctccttgccactggagcccaagcaa 21898602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 2271415 - 2271457
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  2271415 atacgtccttggaaggagctccttgccactggagcccaagcaa 2271457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 13036118 - 13036160
Alignment:
Q  22 atacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  13036118 atacgtccttggaaggagctccttgccactggagcccaagcaa 13036160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15643940 - 15643984
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||    
T  15643940 agatacgtccttggaatgagctccttgccactggagcccaagcaa 15643984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24671978 - 24672022
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  24671978 agatacgtccttgaaaggagctccttgccactggagcccaagcaa 24672022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 17115012 - 17115055
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaatt 66  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||    
T  17115012 tacgtccttggaaggagcttcttgccactggagcccaagcaatt 17115055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 29444880 - 29444918
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaag 61  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  29444880 tacgtctttggaaggagctccttgccactagagcccaag 29444918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5253338 - 5253379
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  5253338 tacgtccttggaaggagctccttgccattggagcccaagcaa 5253379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 5759623 - 5759582
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||  |||||||||| ||||||||||||    
T  5759623 tacgtccttggaaggagttccttgccactggagcccaagcaa 5759582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 19230672 - 19230709
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  19230672 tacgtccttggaaggagctccttgccactggagcccaa 19230709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 21016866 - 21016907
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||| |||||||||| |||||||||| ||||||||||||    
T  21016866 tacgtccctggaaggagctccttgccactggagcccaagcaa 21016907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 29333253 - 29333290
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| | |||||||||||||||||    
T  29333253 tacgtccttggaaggagctcattgccactagagcccaa 29333290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 19572718 - 19572675
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  19572718 gatacgtccttggaaggagctccttgccactggagcccaagcaa 19572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5732035 - 5732076
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  5732035 tacgtccttggaaggagctccttgccactggagcccaagcaa 5732076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 6767166 - 6767207
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  6767166 tacgtccttggaaggagctccttgccactggagcccaagcaa 6767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24498978 - 24498938
Alignment:
Q  20 agatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  24498978 agatacgtccttggaaggagctccttgctactagagcccaa 24498938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 23383642 - 23383603
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  23383642 gatacgtccttggaaggagctccttgccactggagcccaa 23383603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28856967 - 28856928
Alignment:
Q  25 cgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  28856967 cgtccttggaaggagctccttgccactggagcccaagcaa 28856928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28857118 - 28857079
Alignment:
Q  25 cgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  28857118 cgtccttggaaggagctccttgccactggagcccaagcaa 28857079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 7866573 - 7866532
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||| ||||||||    
T  7866573 tacgtccttggaaggagctccttgccactggagtccaagcaa 7866532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 8513511 - 8513470
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||| ||| ||||||||    
T  8513511 tacgtccttggaaggagctccttgccacttgagtccaagcaa 8513470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 25417298 - 25417335
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  25417298 tacgtccttggaaggagctccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 35403627 - 35403664
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  35403627 tacgtccttggaaggagctccttgccactggagcccaa 35403664  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 42086319 - 42086278
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| |||||||||  ||||||||||||    
T  42086319 tacgtccttggaaggagctccttgccaccggagcccaagcaa 42086278  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 68511 - 68474
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||    
T  68511 tacgtccttggaaggagctccttgccactagagcccaa 68474  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 271189 - 271230
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  271189 tacgtccttggaaggagctccttgccaccagagcccaagcaa 271230  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 250128 - 250169
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    ||||||||||||| |||| |||||||||| ||||||||||||    
T  250128 tacgtccttggaatgagctccttgccactggagcccaagcaa 250169  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 30864 - 30935
Alignment:
Q  337 tttttgcagtctcttgtactcagcctctttctcatcatccgaaaattctacttcatcggacacctcttcatc 408  Q
    |||||||| | || |||| || ||||||||||||||||| ||||| |||||||||||  ||| |||||||||    
T  30864 tttttgcattttcctgtattcggcctctttctcatcatctgaaaactctacttcatcaaacaactcttcatc 30935  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 8823 - 8862
Alignment:
Q  21 gatacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  8823 gatacgtccttggaaggagctccttgccactggagcccaa 8862  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 12569 - 12532
Alignment:
Q  23 tacgtccttggaaggagcaccttgccactagagcccaa 60  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  12569 tacgtccttggaagtagctccttgccactagagcccaa 12532  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 12663 - 12623
Alignment:
Q  24 acgtccttggaaggagcaccttgccactagagcccaagcaa 64  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  12663 acgtccttggaaggagcttcttgccactagagtccaagcaa 12623  T

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