View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11651_low_41 (Length: 361)

Name: NF11651_low_41
Description: NF11651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11651_low_41
NF11651_low_41
[»] chr4 (53 HSPs)
chr4 (112-357)||(40636028-40636273)
chr4 (135-354)||(40647994-40648213)
chr4 (10-100)||(31599802-31599891)
chr4 (10-116)||(13509358-13509463)
chr4 (10-111)||(1290197-1290298)
chr4 (10-111)||(31600984-31601085)
chr4 (10-111)||(48780249-48780350)
chr4 (10-110)||(19750574-19750673)
chr4 (10-110)||(19789133-19789232)
chr4 (10-116)||(1963192-1963298)
chr4 (10-111)||(1835101-1835202)
chr4 (18-99)||(8758844-8758925)
chr4 (10-111)||(10471387-10471488)
chr4 (17-109)||(35935539-35935631)
chr4 (10-109)||(12129626-12129725)
chr4 (10-111)||(1964440-1964541)
chr4 (10-111)||(5525361-5525461)
chr4 (10-121)||(8155729-8155839)
chr4 (10-111)||(10470547-10470648)
chr4 (10-111)||(25684935-25685036)
chr4 (10-111)||(52491606-52491707)
chr4 (16-111)||(26421627-26421721)
chr4 (10-111)||(1834120-1834222)
chr4 (10-99)||(21539070-21539159)
chr4 (10-111)||(25685821-25685922)
chr4 (14-111)||(49308031-49308126)
chr4 (10-93)||(8757693-8757776)
chr4 (12-111)||(17388212-17388310)
chr4 (10-100)||(13386531-13386621)
chr4 (10-111)||(17382994-17383094)
chr4 (10-118)||(35934338-35934444)
chr4 (10-117)||(21177992-21178098)
chr4 (11-98)||(27257960-27258047)
chr4 (10-111)||(10447007-10447109)
chr4 (10-88)||(33310088-33310166)
chr4 (10-111)||(5526125-5526225)
chr4 (10-111)||(50909671-50909773)
chr4 (10-91)||(46638724-46638805)
chr4 (10-109)||(1289100-1289199)
chr4 (18-109)||(37728572-37728662)
chr4 (10-80)||(10448259-10448329)
chr4 (18-88)||(54110635-54110705)
chr4 (10-111)||(3927667-3927768)
chr4 (10-111)||(3928857-3928958)
chr4 (17-111)||(13386015-13386111)
chr4 (19-111)||(50909274-50909365)
chr4 (29-93)||(55603549-55603613)
chr4 (18-80)||(33296255-33296317)
chr4 (10-43)||(8896909-8896942)
chr4 (64-109)||(37727700-37727745)
chr4 (30-87)||(46637706-46637763)
chr4 (10-111)||(48781045-48781145)
chr4 (35-118)||(49306769-49306851)
[»] chr8 (38 HSPs)
chr8 (10-111)||(1823553-1823654)
chr8 (10-111)||(1857998-1858099)
chr8 (10-123)||(10007762-10007875)
chr8 (18-117)||(24122878-24122976)
chr8 (10-94)||(29968336-29968420)
chr8 (17-111)||(12351922-12352016)
chr8 (10-111)||(12353360-12353459)
chr8 (10-111)||(30335640-30335741)
chr8 (10-94)||(8388480-8388564)
chr8 (12-111)||(22221365-22221464)
chr8 (12-111)||(22227707-22227806)
chr8 (17-107)||(1824084-1824174)
chr8 (17-107)||(1858529-1858619)
chr8 (10-111)||(10006345-10006446)
chr8 (10-111)||(22220389-22220490)
chr8 (10-111)||(5513983-5514083)
chr8 (10-99)||(18978033-18978121)
chr8 (10-111)||(11283208-11283309)
chr8 (10-111)||(18979119-18979220)
chr8 (10-94)||(32207324-32207408)
chr8 (10-110)||(43661267-43661367)
chr8 (10-109)||(11282011-11282110)
chr8 (12-109)||(8389690-8389787)
chr8 (10-98)||(30568900-30568988)
chr8 (10-109)||(11287779-11287878)
chr8 (16-99)||(43661828-43661911)
chr8 (10-108)||(45112875-45112971)
chr8 (10-99)||(18970924-18971012)
chr8 (10-94)||(24123897-24123981)
chr8 (11-99)||(29043411-29043499)
chr8 (16-94)||(5003103-5003181)
chr8 (46-111)||(23170034-23170097)
chr8 (10-84)||(30570255-30570328)
chr8 (10-95)||(24488679-24488763)
chr8 (17-111)||(30336507-30336601)
chr8 (11-109)||(40471147-40471244)
chr8 (10-111)||(32968457-32968558)
chr8 (55-111)||(24483144-24483200)
[»] chr3 (52 HSPs)
chr3 (10-111)||(54540789-54540890)
chr3 (11-116)||(7758398-7758503)
chr3 (17-123)||(7267633-7267738)
chr3 (10-111)||(46719942-46720043)
chr3 (10-111)||(46721219-46721320)
chr3 (18-111)||(54539756-54539849)
chr3 (10-111)||(29931227-29931328)
chr3 (10-111)||(29980381-29980482)
chr3 (10-111)||(51038789-51038890)
chr3 (10-111)||(55191994-55192094)
chr3 (266-354)||(16865278-16865366)
chr3 (18-93)||(34019152-34019227)
chr3 (10-111)||(22776811-22776912)
chr3 (9-100)||(24516473-24516563)
chr3 (10-117)||(47609692-47609799)
chr3 (17-111)||(534500-534594)
chr3 (17-94)||(12700191-12700268)
chr3 (10-111)||(19984850-19984951)
chr3 (10-111)||(29932698-29932798)
chr3 (10-111)||(29981852-29981952)
chr3 (10-111)||(47614186-47614287)
chr3 (16-111)||(535787-535882)
chr3 (10-109)||(47610579-47610678)
chr3 (17-111)||(8456479-8456572)
chr3 (10-88)||(12703499-12703577)
chr3 (10-92)||(51037555-51037637)
chr3 (10-109)||(7268826-7268924)
chr3 (54-116)||(47615591-47615653)
chr3 (8-121)||(5029680-5029792)
chr3 (10-103)||(11670393-11670486)
chr3 (10-111)||(51469973-51470074)
chr3 (17-117)||(8875901-8876001)
chr3 (10-111)||(19986069-19986172)
chr3 (10-109)||(23770406-23770505)
chr3 (18-111)||(49216248-49216341)
chr3 (18-111)||(51470462-51470554)
chr3 (10-99)||(52840603-52840692)
chr3 (10-125)||(28263110-28263225)
chr3 (10-85)||(31645000-31645075)
chr3 (11-109)||(40426778-40426877)
chr3 (10-117)||(53614814-53614920)
chr3 (36-79)||(55191544-55191587)
chr3 (26-111)||(53901403-53901486)
chr3 (19-88)||(6249633-6249701)
chr3 (36-88)||(6170296-6170348)
chr3 (10-109)||(53616015-53616114)
chr3 (45-111)||(5001201-5001267)
chr3 (62-92)||(31214506-31214536)
chr3 (12-121)||(11671342-11671450)
chr3 (56-121)||(40836426-40836491)
chr3 (10-111)||(52839038-52839139)
chr3 (10-109)||(54987006-54987103)
[»] chr1 (47 HSPs)
chr1 (10-118)||(24422794-24422902)
chr1 (10-111)||(23980465-23980566)
chr1 (10-111)||(51684367-51684468)
chr1 (17-111)||(52274969-52275063)
chr1 (10-111)||(36613903-36614004)
chr1 (10-109)||(50680335-50680433)
chr1 (10-98)||(24426074-24426163)
chr1 (10-111)||(39699766-39699866)
chr1 (20-124)||(11437208-11437312)
chr1 (17-111)||(39698564-39698657)
chr1 (10-111)||(12389981-12390081)
chr1 (12-93)||(43058804-43058885)
chr1 (35-111)||(14999286-14999361)
chr1 (10-109)||(37526877-37526975)
chr1 (10-111)||(7675458-7675558)
chr1 (10-111)||(35067001-35067102)
chr1 (10-111)||(45148582-45148682)
chr1 (10-111)||(52827348-52827449)
chr1 (10-116)||(35595191-35595298)
chr1 (10-117)||(51685764-51685871)
chr1 (10-88)||(52276162-52276240)
chr1 (10-111)||(11436043-11436144)
chr1 (10-111)||(33088616-33088717)
chr1 (10-109)||(45149969-45150068)
chr1 (10-109)||(39153115-39153214)
chr1 (18-117)||(43060013-43060112)
chr1 (17-88)||(44404466-44404537)
chr1 (10-111)||(35594218-35594317)
chr1 (10-111)||(36612854-36612954)
chr1 (10-90)||(43378712-43378792)
chr1 (10-98)||(45157208-45157296)
chr1 (10-109)||(39151934-39152033)
chr1 (10-80)||(25652746-25652816)
chr1 (10-100)||(39222472-39222562)
chr1 (10-111)||(41364830-41364930)
chr1 (10-119)||(52828069-52828178)
chr1 (10-121)||(2940257-2940367)
chr1 (47-88)||(14999991-15000032)
chr1 (35-99)||(7674541-7674603)
chr1 (20-111)||(11190386-11190477)
chr1 (6-88)||(33088091-33088173)
chr1 (30-111)||(50681623-50681704)
chr1 (11-99)||(45156062-45156150)
chr1 (10-89)||(40384748-40384827)
chr1 (10-88)||(7983073-7983151)
chr1 (10-111)||(41366130-41366230)
chr1 (19-111)||(43377721-43377813)
[»] chr5 (40 HSPs)
chr5 (10-109)||(28539819-28539917)
chr5 (10-100)||(36486487-36486576)
chr5 (10-123)||(25523058-25523171)
chr5 (10-119)||(28538669-28538778)
chr5 (10-111)||(16650854-16650955)
chr5 (10-110)||(36485302-36485402)
chr5 (10-111)||(18486901-18487002)
chr5 (10-111)||(19752913-19753013)
chr5 (10-111)||(40255671-40255772)
chr5 (12-111)||(22940624-22940722)
chr5 (17-88)||(2686407-2686478)
chr5 (10-100)||(19754129-19754218)
chr5 (10-94)||(42195151-42195234)
chr5 (17-111)||(25056387-25056481)
chr5 (10-111)||(1796055-1796156)
chr5 (22-111)||(33158099-33158188)
chr5 (10-94)||(5777917-5778001)
chr5 (10-109)||(24332916-24333015)
chr5 (16-111)||(33160291-33160386)
chr5 (10-111)||(1797296-1797396)
chr5 (10-111)||(5778835-5778936)
chr5 (10-111)||(25055413-25055514)
chr5 (10-71)||(25524097-25524158)
chr5 (10-109)||(20216762-20216861)
chr5 (17-95)||(7311607-7311685)
chr5 (10-111)||(42196199-42196300)
chr5 (35-111)||(18154495-18154570)
chr5 (10-98)||(21835054-21835142)
chr5 (25-100)||(25524141-25524216)
chr5 (10-109)||(38834090-38834188)
chr5 (10-111)||(18485139-18485247)
chr5 (10-99)||(1015497-1015586)
chr5 (34-111)||(20214197-20214273)
chr5 (17-109)||(2186774-2186865)
chr5 (18-86)||(5962579-5962647)
chr5 (45-100)||(5730454-5730509)
chr5 (10-61)||(16650043-16650094)
chr5 (56-119)||(38476725-38476788)
chr5 (10-80)||(5730861-5730931)
chr5 (38-88)||(34893689-34893739)
[»] scaffold0632 (1 HSPs)
scaffold0632 (10-117)||(3307-3413)
[»] chr2 (38 HSPs)
chr2 (15-124)||(7899886-7899995)
chr2 (10-121)||(38839233-38839344)
chr2 (10-111)||(38840492-38840593)
chr2 (12-111)||(18904368-18904467)
chr2 (10-111)||(11258810-11258911)
chr2 (10-111)||(36449779-36449880)
chr2 (10-111)||(22587953-22588053)
chr2 (10-111)||(22848192-22848293)
chr2 (10-111)||(23869534-23869634)
chr2 (10-109)||(7898694-7898793)
chr2 (12-111)||(13570558-13570657)
chr2 (10-111)||(18797247-18797349)
chr2 (10-123)||(16446143-16446256)
chr2 (18-123)||(18905995-18906099)
chr2 (10-98)||(41878105-41878196)
chr2 (10-93)||(18300724-18300806)
chr2 (17-111)||(1034475-1034569)
chr2 (10-111)||(802590-802690)
chr2 (30-111)||(18868925-18869006)
chr2 (10-86)||(26545520-26545596)
chr2 (10-94)||(36450920-36451004)
chr2 (10-113)||(1033210-1033311)
chr2 (10-117)||(1093145-1093251)
chr2 (18-117)||(11938796-11938894)
chr2 (10-88)||(28617946-28618023)
chr2 (29-111)||(32739624-32739706)
chr2 (18-99)||(41879219-41879300)
chr2 (10-109)||(13567975-13568072)
chr2 (10-88)||(8535655-8535733)
chr2 (10-88)||(11257646-11257723)
chr2 (18-111)||(13030293-13030383)
chr2 (12-80)||(11996739-11996807)
chr2 (35-87)||(24476868-24476920)
chr2 (10-80)||(810780-810850)
chr2 (10-88)||(22587525-22587602)
chr2 (18-88)||(24475248-24475318)
chr2 (16-88)||(18869168-18869241)
chr2 (10-94)||(8534600-8534683)
[»] chr6 (34 HSPs)
chr6 (10-93)||(1829602-1829685)
chr6 (10-111)||(10784593-10784695)
chr6 (10-116)||(16704496-16704602)
chr6 (10-100)||(10785912-10786001)
chr6 (10-111)||(3721613-3721714)
chr6 (10-111)||(7316293-7316394)
chr6 (16-111)||(8822798-8822893)
chr6 (19-121)||(14822351-14822453)
chr6 (10-88)||(26575053-26575131)
chr6 (10-111)||(8659266-8659367)
chr6 (8-124)||(27322065-27322180)
chr6 (10-121)||(7314871-7314981)
chr6 (10-117)||(26574614-26574720)
chr6 (18-116)||(8821869-8821967)
chr6 (10-111)||(12382710-12382811)
chr6 (19-100)||(14823583-14823664)
chr6 (10-111)||(27437829-27437930)
chr6 (10-109)||(5658759-5658858)
chr6 (18-111)||(8660211-8660303)
chr6 (10-119)||(17496786-17496900)
chr6 (45-117)||(3722541-3722613)
chr6 (10-109)||(34834578-34834677)
chr6 (10-94)||(6840210-6840294)
chr6 (11-87)||(12350823-12350898)
chr6 (19-118)||(6842291-6842390)
chr6 (10-80)||(3333180-3333250)
chr6 (54-110)||(26717127-26717183)
chr6 (13-111)||(16703571-16703666)
chr6 (10-93)||(30494575-30494658)
chr6 (10-80)||(3333025-3333095)
chr6 (61-122)||(27443740-27443801)
chr6 (10-99)||(29473090-29473179)
chr6 (35-111)||(1828740-1828816)
chr6 (59-111)||(16415581-16415633)
[»] scaffold0320 (1 HSPs)
scaffold0320 (10-116)||(19484-19590)
[»] scaffold2034 (2 HSPs)
scaffold2034 (10-111)||(234-335)
scaffold2034 (10-91)||(977-1058)
[»] scaffold1303 (1 HSPs)
scaffold1303 (10-111)||(1440-1541)
[»] scaffold0302 (2 HSPs)
scaffold0302 (10-111)||(17471-17572)
scaffold0302 (10-111)||(18775-18876)
[»] chr7 (33 HSPs)
chr7 (10-100)||(31659635-31659725)
chr7 (11-99)||(18372457-18372544)
chr7 (10-109)||(11662550-11662649)
chr7 (10-111)||(22629484-22629588)
chr7 (18-111)||(18371425-18371518)
chr7 (10-111)||(48934902-48935003)
chr7 (10-84)||(14999154-14999228)
chr7 (10-111)||(3227593-3227694)
chr7 (10-111)||(7500456-7500556)
chr7 (11-99)||(11658392-11658480)
chr7 (10-110)||(17781663-17781763)
chr7 (11-111)||(22630452-22630552)
chr7 (10-109)||(42886285-42886384)
chr7 (10-124)||(7501851-7501965)
chr7 (10-88)||(47369805-47369883)
chr7 (16-111)||(17782558-17782653)
chr7 (10-121)||(31949313-31949424)
chr7 (10-111)||(31949801-31949902)
chr7 (10-110)||(46482599-46482699)
chr7 (10-109)||(128600-128699)
chr7 (10-111)||(47525366-47525467)
chr7 (10-98)||(3227121-3227209)
chr7 (10-98)||(30439357-30439445)
chr7 (20-88)||(31661018-31661086)
chr7 (16-111)||(127338-127431)
chr7 (10-111)||(21505417-21505516)
chr7 (34-111)||(769414-769491)
chr7 (45-99)||(47524538-47524592)
chr7 (20-89)||(48933690-48933759)
chr7 (43-111)||(20163588-20163656)
chr7 (45-111)||(34174017-34174082)
chr7 (20-80)||(34352795-34352855)
chr7 (54-94)||(46483551-46483591)
[»] scaffold0019 (2 HSPs)
scaffold0019 (10-111)||(61458-61559)
scaffold0019 (10-111)||(60091-60192)
[»] scaffold0294 (2 HSPs)
scaffold0294 (15-111)||(5442-5538)
scaffold0294 (15-99)||(4456-4539)
[»] scaffold0059 (2 HSPs)
scaffold0059 (17-88)||(3699-3770)
scaffold0059 (10-98)||(4729-4817)
[»] scaffold0112 (1 HSPs)
scaffold0112 (15-111)||(37149-37244)
[»] scaffold0003 (2 HSPs)
scaffold0003 (10-111)||(49432-49533)
scaffold0003 (61-122)||(43560-43621)
[»] scaffold0093 (2 HSPs)
scaffold0093 (18-111)||(2472-2564)
scaffold0093 (18-111)||(7095-7187)
[»] scaffold0186 (1 HSPs)
scaffold0186 (10-111)||(23082-23181)
[»] scaffold0045 (2 HSPs)
scaffold0045 (10-80)||(48341-48409)
scaffold0045 (36-99)||(49109-49172)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-111)||(7414-7515)
[»] scaffold0321 (2 HSPs)
scaffold0321 (12-110)||(18730-18828)
scaffold0321 (10-100)||(19408-19499)
[»] scaffold0586 (1 HSPs)
scaffold0586 (17-126)||(6329-6438)
[»] scaffold0369 (1 HSPs)
scaffold0369 (20-111)||(13194-13283)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-93)||(15702-15740)


Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 112 - 357
Target Start/End: Complemental strand, 40636273 - 40636028
Alignment:
Q  112 ataaaaaataatgaaacatatacatcatcacaatcatttatatattagtgaataatcagtattatatattatgaaattgatgtatttccctgctcccatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  40636273 ataaaaaataatgaaacatatacatcatcacaatcatttatatattagtgaataatcagtattatatattatgaaattaatgtatttccttactcccatt 40636174  T
Q  212 cagaatcactctcctccatgagaaggtaaatggttctccaaaacatcaactcttggtttctcacaactaatagaaaactcatcgccaggtgtatactctt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40636173 cagaatcactctcctccatgagaaggtaaatggttctccaaaacatcaactcttggtttctcacaactaatagaaaactcatcgccaggtgtatactctt 40636074  T
Q  312 tgaaacacgccaacctcccaagttcttcaccttcatcaattatcaa 357  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  40636073 tgaaacacgccaatctcccaagttcttcaacttcatcaattatcaa 40636028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 354
Target Start/End: Complemental strand, 40648213 - 40647994
Alignment:
Q  135 atcatcacaatcatttatatattagtgaataatcagtattatatattatgaaattgatgtatttccctgctcccattcagaatcactctcctccatgaga 234  Q
    |||||||||||||  |||| | |||  |||||||  |||||||||| |||||| | |||||||||| |||||    ||| | ||| ||||||||||||||    
T  40648213 atcatcacaatcaaatatagaatagcaaataatcgatattatatatcatgaaaataatgtatttccttgctctttatcaaactcaatctcctccatgaga 40648114  T
Q  235 aggtaaatggttctccaaaacatcaactcttggtttctcacaactaatagaaaactcatcgccaggtgtatactctttgaaacacgccaacctcccaagt 334  Q
    ||| |||||||| ||||  ||||||||||||||||||||||| |||| |||||| ||||| ||| || |||||||||||||||| |||||||  ||||||    
T  40648113 agggaaatggttgtccatcacatcaactcttggtttctcacatctaacagaaaattcatcaccatgtctatactctttgaaacatgccaaccgaccaagt 40648014  T
Q  335 tcttcaccttcatcaattat 354  Q
    |||||| |||||||||||||    
T  40648013 tcttcaacttcatcaattat 40647994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 31599891 - 31599802
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31599891 gcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaaa 31599802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 13509358 - 13509463
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||| ||||||| |||||||  ||||| ||||| ||||||||||| |||||||||||| ||||||||||| |||||||||    
T  13509358 gcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacacttta 13509456  T
Q  110 gcataaa 116  Q
    || ||||    
T  13509457 gcctaaa 13509463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 1290197 - 1290298
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||| | |||||| |||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| | |||||||    
T  1290197 gcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcacttta 1290296  T
Q  110 gc 111  Q
    ||    
T  1290297 gc 1290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 31600984 - 31601085
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| | |||||||    
T  31600984 gcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcacttta 31601083  T
Q  110 gc 111  Q
    ||    
T  31601084 gc 31601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 48780350 - 48780249
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||    
T  48780350 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcacttta 48780251  T
Q  110 gc 111  Q
    ||    
T  48780250 gc 48780249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 19750574 - 19750673
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||   |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||    
T  19750574 gcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19750672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 19789232 - 19789133
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||   |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||    
T  19789232 gcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 1963298 - 1963192
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||| ||||||||| | |||||| |||||||||||| |||| || ||||||||||| ||||| |||||||||||||||||| | |||||||    
T  1963298 gcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 1963199  T
Q  110 gcataaa 116  Q
    || ||||    
T  1963198 gcctaaa 1963192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 1835101 - 1835202
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||  |||||| | |||||||    
T  1835101 gcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcacttta 1835200  T
Q  110 gc 111  Q
    ||    
T  1835201 gc 1835202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 8758844 - 8758925
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||||||| ||| |||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaa 8758925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 10471387 - 10471488
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||    
T  10471387 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T
Q  110 gc 111  Q
    ||    
T  10471487 gc 10471488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 35935539 - 35935631
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||||| ||| | |||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 12129725 - 12129626
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||| |||  ||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||| | |||||||    
T  12129725 gcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 1964440 - 1964541
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||| | ||||||| |||||||| || ||||||||||||||||| |||||| | |||||||    
T  1964440 gcaaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T
Q  110 gc 111  Q
    ||    
T  1964540 gc 1964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 5525461 - 5525361
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||    
T  5525461 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtacttta 5525363  T
Q  110 gc 111  Q
    ||    
T  5525362 gc 5525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 8155839 - 8155729
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggg-gtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttt 108  Q
    |||||| |||||||||||||||| |||||||| ||||||||| ||||||||| |  |||||||||||||||| |||||||  ||||||||| | ||||||    
T  8155839 gcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttt 8155742  T
Q  109 agcataaaaaata 121  Q
    | |||||||||||    
T  8155741 aacataaaaaata 8155729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10470648 - 10470547
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| |  |||| |||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  10470648 gcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10470549  T
Q  110 gc 111  Q
    ||    
T  10470548 gc 10470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 25685036 - 25684935
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||| | |||||||    
T  25685036 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T
Q  110 gc 111  Q
    ||    
T  25684936 gc 25684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 52491606 - 52491707
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||| ||||||| |||||||| |||||| |||| |||| ||  ||||||||||||||||| ||||||||||| |||||| |||||||||    
T  52491606 gcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacacttta 52491705  T
Q  110 gc 111  Q
    ||    
T  52491706 gc 52491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 26421627 - 26421721
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||| |||  ||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || |||||||| | |||||||||    
T  26421627 gggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagc 26421721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1834222 - 1834120
Alignment:
Q  10 gcaaaggggctaaatcttagggga-ccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttt 108  Q
    ||||| |||||||||||||||||  |||||||| |||||||| ||| |||||||||||||||| |||||||| |||||||  ||||||||| | ||||||    
T  1834222 gcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcacttt 1834123  T
Q  109 agc 111  Q
    |||    
T  1834122 agc 1834120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 21539070 - 21539159
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||| |||||||||||||||  ||||||| ||||||||  ||||||| || ||||||||||||||||||||| ||||||| ||||||    
T  21539070 gcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaa 21539159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 25685821 - 25685922
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  25685821 gcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 25685920  T
Q  110 gc 111  Q
    ||    
T  25685921 gc 25685922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 49308031 - 49308126
Alignment:
Q  14 aggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||| ||||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||||    
T  49308031 aggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 49308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 8757776 - 8757693
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||| |||||||||||||| ||| |||||||| |||||| |||||||||||||  ||||||| |||||||| ||||||||||||    
T  8757776 gcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaagggg 8757693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 17388212 - 17388310
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| |||| |||| |||||||| |||||| |||||||| |||  ||||||||||||||||| |||||| ||||||||||| | |||||||||    
T  17388212 aaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 17388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 13386531 - 13386621
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||| ||||||| ||||||||||  | ||||| | ||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  13386531 gcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaa 13386621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 17383094 - 17382994
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||| |||| |||| |||||||| ||||||||||||||| |||  ||||||||||||||||| |||||| ||||| ||||| | |||||||    
T  17383094 gcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 17382996  T
Q  110 gc 111  Q
    ||    
T  17382995 gc 17382994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 35934444 - 35934338
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||| ||| ||||||||||| ||| | ||||||||||  ||||||| ||||||||| |||||||  ||||||||| | |||||||    
T  35934444 gcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T
Q  110 gcataaaaa 118  Q
     ||||||||    
T  35934346 ccataaaaa 35934338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 21178098 - 21177992
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||| |||||||  ||||||| |||||||||| | |||||| |||||||||||| ||| | |||||| ||||||| ||| |||||||||    
T  21178098 gcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacacttta 21178000  T
Q  110 gcataaaa 117  Q
    || |||||    
T  21177999 gcctaaaa 21177992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 27257960 - 27258047
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    |||||||||||||||||| |||   ||||||  ||||||||||  ||| ||||||||||||||| |||||||||||||||||| ||||    
T  27257960 caaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggagaaa 27258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10447109 - 10447007
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag-gggggaaaaatacacttt 108  Q
    |||||||||||||||||||||||   |||||| | |||||||||| |||||||  |||||||||| ||||| ||| ||||| ||||||||| | ||||||    
T  10447109 gcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcacttt 10447010  T
Q  109 agc 111  Q
    |||    
T  10447009 agc 10447007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 33310088 - 33310166
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||| ||||||||| ||| || |||||||||||||||||||| |||||| |  |||||| |||||||||||||||||    
T  33310088 gcaaagaggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta 33310166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 5526125 - 5526225
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | |||||  ||||||||||| ||||||||||||||||| |||||| || |||||||| | |||||||    
T  5526125 gcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 5526223  T
Q  110 gc 111  Q
    ||    
T  5526224 gc 5526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 50909671 - 50909773
Alignment:
Q  10 gcaaaggggctaaatctt-aggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttt 108  Q
    |||||||||||||||||| |||||  ||||||| |||||||| ||| ||||| |||||||| |||| ||||||||| ||| || || |||| | ||||||    
T  50909671 gcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcacttt 50909770  T
Q  109 agc 111  Q
    |||    
T  50909771 agc 50909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 46638724 - 46638805
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagg 91  Q
    |||||||| |||||||||||||| | |||||| || ||||||| | |||||| |||||||| ||| ||||| ||||||||||    
T  46638724 gcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaagg 46638805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 1289199 - 1289100
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||| ||||||||| | | | |||||| |||||||| ||||||| || |||||||| ||| | ||| |||||||||||||||||| | |||||||    
T  1289199 gcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 37728572 - 37728662
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||  ||  ||||||| |||||||||||| |||| || ||||||||||| |||||||||||| ||| || |||||| |||||||    
T  37728572 gctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtt-aggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 10448259 - 10448329
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||||||||||| ||||||| || |||||||| |||||||||||| |||||||  ||||| |||| |||||    
T  10448259 gcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaacttttt 10448329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 54110635 - 54110705
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||| ||||||| | ||||||||| ||||||||| | || |||||||||||||| ||||| |||||||    
T  54110635 gctaaattttagggggctaaaattataatttttgtacattggaggtcaaaattgcaaattttttaaagtta 54110705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 3927768 - 3927667
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||| | ||| ||||||||||| |||||||  ||| | ||||| |||||| ||||  ||||||||||||  ||||||||| | |||||||    
T  3927768 gcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcacttta 3927669  T
Q  110 gc 111  Q
    ||    
T  3927668 gc 3927667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 3928857 - 3928958
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||| | ||| || |||||||| | |||||  ||| ||||||| |||||| ||||  |||| ||||||| |||||||||| | |||||||    
T  3928857 gcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 3928956  T
Q  110 gc 111  Q
    ||    
T  3928957 gc 3928958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 13386111 - 13386015
Alignment:
Q  17 ggctaaatcttaggggacca-aaattatagtttttgtacttagggggtcaaaattgcaagt-ttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||||   | ||||| | ||||| |||||||||||| ||||||||||||| |||| |||||||  ||||||||| | |||||||||    
T  13386111 ggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagc 13386015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 50909365 - 50909274
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||| |   |||||| |||||||| ||  |||| |||||||||||||| ||||||||| || |||||  ||||||||||||||||    
T  50909365 ctaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaactt-aggggaaaaaaatacactttagc 50909274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 55603549 - 55603613
Alignment:
Q  29 ggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||| |||||||  ||||||||||||  ||||| | |||||||||||||||| ||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaagggg 55603613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33296317 - 33296255
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||||||  |||||||||||||||||||||||| |||||||| |  |||||||  ||||||||    
T  33296317 gctaaattataggggaccaaaattatagtttttatacttaggagaccaaaattataagttttt 33296255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 8896909 - 8896942
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattat 43  Q
    ||||||||||||||||||| ||||||||||||||    
T  8896909 gcaaaggggctaaatcttaagggaccaaaattat 8896942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 37727745 - 37727700
Alignment:
Q  64 caaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| ||| ||||||||||||||| || |||||||||||||||    
T  37727745 caaaattacaactttttaaaagttaagaggagaaaaatacacttta 37727700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 46637763 - 46637706
Alignment:
Q  30 gggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 87  Q
    |||||||||||| |||||||||||| ||||| |  |||||  ||||||||||||||||    
T  46637763 gggaccaaaattgtagtttttgtacatagggagctaaaatcacaagtttttaaaagtt 46637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 48781045 - 48781145
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||| |||||||  | ||||| | ||||| ||||||||||   ||||||||||| ||||| |||||||  ||||||||| | |||||||    
T  48781045 gcaatggggctaaattttaggggggctaaattgtggttttagtacttagggac-caaaattgcaaatttttgaaagttagagggggaaaagtgcacttta 48781143  T
Q  110 gc 111  Q
    ||    
T  48781144 gc 48781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 49306851 - 49306769
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa-tacactttagcataaaaa 118  Q
    ||||||| |||||||||||||||   || ||||||||||||||||| ||||||  ||||| ||||| | ||||||||| ||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt--gggggaaaaaagtgcactttagcctaaaaa 49306769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1823654 - 1823553
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  1823654 gcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacacttta 1823555  T
Q  110 gc 111  Q
    ||    
T  1823554 gc 1823553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1858099 - 1857998
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  1858099 gcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacacttta 1858000  T
Q  110 gc 111  Q
    ||    
T  1857999 gc 1857998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 10007762 - 10007875
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||||||||||| | |||| | ||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||    
T  10007762 gcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10007861  T
Q  110 gcataaaaaataat 123  Q
    || || ||||||||    
T  10007862 gcctataaaataat 10007875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 24122976 - 24122878
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaa 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||| |||||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcctaaaa 24122878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 29968336 - 29968420
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29968336 gcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaaggggg 29968420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 12352016 - 12351922
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagc 12351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 12353360 - 12353459
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||| | |||||||    
T  12353360 gcaatggggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcacttta 12353457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 30335741 - 30335640
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||   |||||| || ||||||||||||| | | ||||||||||||||||||||||||||||| |||||||| |||||||    
T  30335741 gcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcacttta 30335642  T
Q  110 gc 111  Q
    ||    
T  30335641 gc 30335640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 8388564 - 8388480
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||| ||||||||||||| |||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttagggggg 8388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 22221365 - 22221464
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||||||||  ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||| | |||||||||    
T  22221365 aaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 22227707 - 22227806
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||||||||  ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||| | |||||||||    
T  22227707 aaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 22227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactt 107  Q
    |||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||||| |||||    
T  1824084 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactt 107  Q
    |||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||||| |||||    
T  1858529 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10006446 - 10006345
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| | |||||  ||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  10006446 gcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 10006347  T
Q  110 gc 111  Q
    ||    
T  10006346 gc 10006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 22220490 - 22220389
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||| ||| |||||||  ||||||||| | |||||||    
T  22220490 gcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcacttta 22220391  T
Q  110 gc 111  Q
    ||    
T  22220390 gc 22220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 5514083 - 5513983
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||| |||||||| |||||| |||||| |||| | |||||||    
T  5514083 gcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcacttta 5513985  T
Q  110 gc 111  Q
    ||    
T  5513984 gc 5513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 18978121 - 18978033
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| |||||||||||    
T  18978121 gcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaa 18978033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 11283208 - 11283309
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||| |||||||||||||||| |  ||||| ||| |||||||  |||||| ||| ||||| |||||||||||||| ||||| |||||||    
T  11283208 gcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttta 11283307  T
Q  110 gc 111  Q
    ||    
T  11283308 gc 11283309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18979119 - 18979220
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||| || ||| |||||||| |||||||| || |||||||| |||||||||||||| || ||||||| |||||||||| | |||||||    
T  18979119 gcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcacttta 18979218  T
Q  110 gc 111  Q
    ||    
T  18979219 gc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 32207324 - 32207408
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||||| |||||||||||| | | |||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||    
T  32207324 gcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttagggggg 32207408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 43661367 - 43661267
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| || |||  |||||||| || ||||| ||| |||||||  ||||| | |||||||    
T  43661367 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcacttta 43661268  T
Q  110 g 110  Q
    |    
T  43661267 g 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11282110 - 11282011
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||||||  ||||||| |  ||||||||  ||||||| ||||||||||| ||||||||||||||||||| |||| | |||||||    
T  11282110 gcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 8389690 - 8389787
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| || |||  ||||||||||| ||||| ||| ||||| |||||||| | |||||||    
T  8389690 aaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 30568988 - 30568900
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || | | ||||||||| || ||||| ||| |||  ||||||||    
T  30568988 gcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagagggggaaa 30568900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11287878 - 11287779
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| | ||| ||||||||| |||||||| |||||| ||||||||| ||| ||||||||||||||||| ||||||| ||| | |||| | |||||||    
T  11287878 gcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 43661828 - 43661911
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||| |||||||||||| |||||||| |||||||||||| ||| || | |||||||||| ||||| ||||||||||| ||||||    
T  43661828 gggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaa 43661911  T

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Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 45112971 - 45112875
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttt 108  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| |  | |||||| ||| ||||| |||||| |||| |||||||| ||||||    
T  45112971 gcaaaggggctaattcttaggggaccaaaattataatttttgtacttagagact-aaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 18971012 - 18970924
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||||| ||||||||  |||  ||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| |||||||||||    
T  18971012 gcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaa 18970924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 24123897 - 24123981
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||||||||||||||||| | | |||||| || |||| ||||||| | || ||||||||||||||||| ||||||| |||||    
T  24123897 gcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg 24123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 29043499 - 29043411
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||||||||||||||| ||   |||||| |||||||||||| |||||||||||||| || | ||||| || |||||||| ||||||    
T  29043499 caaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaa 29043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 5003103 - 5003181
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagttttt-gtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||||||||||||||| |||||| | |||||| ||||||||||| | ||||||||||| |||| ||||||| |||||    
T  5003103 gggctaaatcttaggggac-aaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagttagggggg 5003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 23170034 - 23170097
Alignment:
Q  46 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||| |||||||||||||||||| ||| |||  ||||| ||||| |||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatta--ggggggaaaatgcactttagc 23170097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 30570255 - 30570328
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaa 84  Q
    ||||| ||||||||||||||||| |||||||| || ||||||||| ||  || |||||||||||| |||||||||    
T  30570255 gcaaaagggctaaatcttagggggccaaaattctaatttttgtacata-aggatcaaaattgcaactttttaaaa 30570328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 24488679 - 24488763
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggggg 95  Q
    |||| |||||||||||||| ||| | |||||| | |||||  || |||||||| ||||||||||||||||| ||||||| ||||||    
T  24488679 gcaatggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggggg 24488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 30336507 - 30336601
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| ||  ||||||  |||||||| ||||||| ||||| | || | |||||||||    
T  30336507 ggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagc 30336601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 40471147 - 40471244
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| || ||||||||| ||| | |||||| ||||||||||| |||  ||  |||||||| |||||||| |||||||| ||||||||| | |||||||    
T  40471147 caaagaggttaaatcttaaggggctaaaattgtagtttttgtattta-tggaccaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 32968558 - 32968457
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||| | ||| || |||||||| | |||||  ||| | ||||| |||||| ||||  |||| ||||||| |||||||||| | |||||||    
T  32968558 gcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttta 32968459  T
Q  110 gc 111  Q
    ||    
T  32968458 gc 32968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 24483200 - 24483144
Alignment:
Q  55 ttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||| ||||||||||||||||| ||| ||| | |||||||| | |||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagc 24483144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 54540789 - 54540890
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  54540789 gcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 54540888  T
Q  110 gc 111  Q
    ||    
T  54540889 gc 54540890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 7758503 - 7758398
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttag 110  Q
    |||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||    
T  7758503 caaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttag 7758404  T
Q  111 cataaa 116  Q
    | ||||    
T  7758403 cctaaa 7758398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 7267738 - 7267633
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaa 116  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||| | ||||||| | ||||    
T  7267738 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttaacctaaa 7267640  T
Q  117 aaataat 123  Q
    |||||||    
T  7267639 aaataat 7267633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 46720043 - 46719942
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||||||| |||| |||||| |||||||| ||| ||||||| |||||| |||| |||||||||||||||||||||||||| |||||||    
T  46720043 gcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcacttta 46719944  T
Q  110 gc 111  Q
    ||    
T  46719943 gc 46719942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 46721219 - 46721320
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||| |||| ||||||||||||| |||| ||||| | |||||||    
T  46721219 gcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcacttta 46721318  T
Q  110 gc 111  Q
    ||    
T  46721319 gc 46721320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 54539849 - 54539756
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||| | |||||||||    
T  54539849 gctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagc 54539756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 29931328 - 29931227
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||  |||||||||||||||| ||||||| ||| |||||| | |||||||    
T  29931328 gcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29931229  T
Q  110 gc 111  Q
    ||    
T  29931228 gc 29931227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 29980482 - 29980381
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||  |||||||||||||||| ||||||| ||| |||||| | |||||||    
T  29980482 gcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29980383  T
Q  110 gc 111  Q
    ||    
T  29980382 gc 29980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 51038789 - 51038890
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||  || ||||| |||||||||||| |||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||| | |||||||    
T  51038789 gcaaaggggacaattcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcacttta 51038888  T
Q  110 gc 111  Q
    ||    
T  51038889 gc 51038890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 55191994 - 55192094
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||| ||||  ||| |||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  55191994 gcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaagggggg-aaaatacacttta 55192092  T
Q  110 gc 111  Q
    ||    
T  55192093 gc 55192094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 16865366 - 16865278
Alignment:
Q  266 ggtttctcacaactaatagaaaactcatcgccaggtgtatactctttgaaacacgccaacctcccaagttcttcaccttcatcaattat 354  Q
    ||||||||| |||||| |||||| ||||| |||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  16865366 ggtttctcagaactaacagaaaattcatcaccaggtatatactctttgaagcacgctaacctcccaagttcttcaacttcatcaattat 16865278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 34019152 - 34019227
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    ||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 22776811 - 22776912
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||||||| ||| | ||||||| ||| |||||| | |||||||    
T  22776811 gcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcacttta 22776910  T
Q  110 gc 111  Q
    ||    
T  22776911 gc 22776912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 24516563 - 24516473
Alignment:
Q  9 agcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||||||| ||||||||||| ||| |||||||| |||||||| ||||||||| | ||||||||||||||||| |||||| ||||||||||||    
T  24516563 agcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagtt-aggggggaaaaa 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 47609799 - 47609692
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||    ||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| | || ||||    
T  47609799 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcatttta 47609700  T
Q  110 gcataaaa 117  Q
    || |||||    
T  47609699 gcctaaaa 47609692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 534594 - 534500
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||||||||| | |||||  |||| |||| | |||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagc 534500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 12700268 - 12700191
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||||| ||||||  ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  12700268 ggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagggggg 12700191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 19984951 - 19984850
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||  ||  ||||||| |||||||||||| ||||||| ||||||||||||||||| ||| ||| |||||||||| | |||||||    
T  19984951 gcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcacttta 19984852  T
Q  110 gc 111  Q
    ||    
T  19984851 gc 19984850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 29932698 - 29932798
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||| |||||||||| |||  ||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  29932698 gcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 29932796  T
Q  110 gc 111  Q
    ||    
T  29932797 gc 29932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 29981852 - 29981952
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||| |||||||||| |||  ||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  29981852 gcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 29981950  T
Q  110 gc 111  Q
    ||    
T  29981951 gc 29981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 47614287 - 47614186
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||| |||||||||||||||| |||||||| | |||||  ||||||||||| ||||||||||||||||| |||||||  |||| |||| | |||||||    
T  47614287 gcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcacttta 47614188  T
Q  110 gc 111  Q
    ||    
T  47614187 gc 47614186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 535787 - 535882
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||||   ||||||||||||||  |||||| |||  ||||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 535882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 47610579 - 47610678
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  47610579 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 8456572 - 8456479
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||  ||||||||||||||||| ||| || |||||| |||| | |||||||||    
T  8456572 ggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 12703499 - 12703577
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||| ||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  12703499 gcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtta 12703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 51037637 - 51037555
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggg 92  Q
    ||||||||||||| ||||||||| | |||||| |||||||||| | ||| ||||||||||||||| ||||| |||||||||||    
T  51037637 gcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaaggg 51037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 7268826 - 7268924
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||| |||||||||||| | |||||||| |||||| | |||||||| || ||||||||||||||||| |||||| ||||||||||| | |||||||    
T  7268826 gcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 47615591 - 47615653
Alignment:
Q  54 cttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaa 116  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||| ||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaa 47615653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 5029680 - 5029792
Alignment:
Q  8 aagcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactt 107  Q
    |||||| |||||||| |||||||||   |||||| | ||||| ||||||||| || |||||||||||| |||| |||| | ||||||||||| | |||||    
T  5029680 aagcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactt 5029778  T
Q  108 tagcataaaaaata 121  Q
    |||| |||||||||    
T  5029779 tagcctaaaaaata 5029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 11670486 - 11670393
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatac 103  Q
    |||| ||| ||||||| || ||||||||||||||||||||| ||||||||||   |||||||||| ||||| ||| ||||| ||| ||||||||    
T  11670486 gcaatgggactaaatcataagggaccaaaattatagtttttatacttaggggactaaaattgcaaatttttgaaaattaagcgggaaaaaatac 11670393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 51470074 - 51469973
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||    ||||| | ||||| |||||||||||| ||||||||||||||||| ||| ||| || ||||||| | |||||||    
T  51470074 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T
Q  110 gc 111  Q
    ||    
T  51469974 gc 51469973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 8876001 - 8875901
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaa 116  Q
    |||||||||||||||| |||||||| |||||||||||| || ||||  |||||||||  |||||  || |||||||| ||||| | ||||||||| ||||    
T  8876001 ggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcctaaa 8875902  T
Q  117 a 117  Q
    |    
T  8875901 a 8875901  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 19986069 - 19986172
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagg--gggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactt 107  Q
    ||||||||| |||||||||| ||  ||||||| |||||||| ||| ||||  ||| ||||||||||||||||| ||| ||||| |||||||| | |||||    
T  19986069 gcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactt 19986168  T
Q  108 tagc 111  Q
    ||||    
T  19986169 tagc 19986172  T

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Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 23770406 - 23770505
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||| | |||||| |||||||||||| || |||  |||||||| || ||||| ||| |||||||| ||||| | |||||||    
T  23770406 gcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

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Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 49216341 - 49216248
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| |||  || |||| |||||||||||| ||||||||||||||||||| ||||| ||| ||| | | |||||| | |||||||||    
T  49216341 gctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagc 49216248  T

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Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 51470462 - 51470554
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||  | ||||| | ||||| ||||||||||| || ||||||||||||||| |||||| ||||||||| | | |||||||||    
T  51470462 gctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagc 51470554  T

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Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 52840603 - 52840692
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||| ||||||||||||||||||  ||||||| | |||||  || |||||| | ||||||||||||||||| ||||||| ||| ||||||    
T  52840603 gcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaa 52840692  T

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Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 28263110 - 28263225
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||| | |||||| |||||||| | |||||  ||| | ||||| |||||| ||||  |||||||||||| |||||||||| | |||||||    
T  28263110 gcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcacttta 28263209  T
Q  110 gcataaaaaataatga 125  Q
    || || || |||||||    
T  28263210 gcctacaatataatga 28263225  T

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Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 31645075 - 31645000
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaag 85  Q
    ||||| ||||||||||||||| |   |||||| ||||||||| |||||||||| |||||||| |||||||| ||||    
T  31645075 gcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

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Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 40426778 - 40426877
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaatt-gcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||| |||||||| |||||| |||||||| || ||||||||  || |||| | ||||| |||| ||||| |||||||||||||||||| | |||||||    
T  40426778 caaaggagctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

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Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 53614920 - 53614814
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||| |||| |||| |||||||| |||||||| ||  ||| ||   ||||||| |||||||| ||||||||||| |||||||| |||||||    
T  53614920 gcaaatgggctaattcttggggg-ccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcacttta 53614822  T
Q  110 gcataaaa 117  Q
    || |||||    
T  53614821 gcctaaaa 53614814  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 55191587 - 55191544
Alignment:
Q  36 aaaattatagtttttgtacttagggggtcaaaattgcaagtttt 79  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  55191587 aaaattatagtttttgtatttagggtgtcaaaattgcaagtttt 55191544  T

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Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 53901403 - 53901486
Alignment:
Q  26 ttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||| |||| ||| ||||||||||||||| || ||||||||||||| ||||| ||| |||  ||||||||| | |||||||||    
T  53901403 ttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagc 53901486  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 6249701 - 6249633
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||||||| ||||  |||||| ||||||||||||||| ||| | |||||||||||||||| |||||||    
T  6249701 ctaaatcttaagggat-aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

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Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  36 aaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||| || |||||||||||| ||| |||||||||||||||||| |||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

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Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 53616015 - 53616114
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| ||||| |||| |||| |  ||||| |||||||||||| || ||  | |||||| ||||| ||||||||||||||| |||||| | |||||||    
T  53616015 gcaaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttta 53616114  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 5001267 - 5001201
Alignment:
Q  45 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||| |||||||||||| |||||||||||| |||| |||| || ||| |||||| | |||||||||    
T  5001267 gttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagc 5001201  T

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Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 31214506 - 31214536
Alignment:
Q  62 gtcaaaattgcaagtttttaaaagttaaggg 92  Q
    |||||||||||||||||||||||||||||||    
T  31214506 gtcaaaattgcaagtttttaaaagttaaggg 31214536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 11671342 - 11671450
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||| |||||| ||||||  ||||  | |||||||| || ||||||||  |||||||||||||||| |||||| ||| || |||| | |||||||||    
T  11671342 aaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcactttagc 11671440  T
Q  112 ataaaaaata 121  Q
     ||| |||||    
T  11671441 ctaagaaata 11671450  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 40836426 - 40836491
Alignment:
Q  56 tagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaaata 121  Q
    |||||||||||||| ||||  |||||||| ||| |||| ||||||| || |||||| |||||||||    
T  40836426 tagggggtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagcctaaaaaata 40836491  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 52839139 - 52839038
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||| |||| ||   |||||| | ||||| |||||||| ||||||||||| ||| |||||  ||||||  ||||||||| | |||||||    
T  52839139 gcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcacttta 52839040  T
Q  110 gc 111  Q
    ||    
T  52839039 gc 52839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 54987006 - 54987103
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| |||||||||||| ||  |||||||||||||||| ||| ||||||   ||||| |||| ||||| ||| |||  ||||||||| | |||||||    
T  54987006 gcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcacttta 54987103  T

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Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 24422902 - 24422794
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||    
T  24422902 gcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttta 24422803  T
Q  110 gcataaaaa 118  Q
    || ||||||    
T  24422802 gcctaaaaa 24422794  T

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Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 23980465 - 23980566
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  23980465 gcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcacttta 23980564  T
Q  110 gc 111  Q
    ||    
T  23980565 gc 23980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 51684468 - 51684367
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||| | |||||||    
T  51684468 gcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcacttta 51684369  T
Q  110 gc 111  Q
    ||    
T  51684368 gc 51684367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 52275063 - 52274969
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| | |||||||||    
T  52275063 ggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagc 52274969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 36613903 - 36614004
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||| ||||||||||||||||  ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||| |||||||    
T  36613903 gcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcacttta 36614002  T
Q  110 gc 111  Q
    ||    
T  36614003 gc 36614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 50680433 - 50680335
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||  |||||||| |||||||||| |||||||    
T  50680433 gcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaag-ggggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 24426074 - 24426163
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-aggggggaaa 98  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  24426074 gcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaa 24426163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 39699766 - 39699866
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| || |||||| ||||||||||| | |||||||    
T  39699766 gcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcacttta 39699864  T
Q  110 gc 111  Q
    ||    
T  39699865 gc 39699866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 11437208 - 11437312
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaaa 119  Q
    ||||||||||||| |||||||| ||||||||||||||| |||  ||||||||||||||||| ||||||||||||| |||| | ||||||||| |||||||    
T  11437208 taaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaaaaaa 11437307  T
Q  120 taatg 124  Q
     ||||    
T  11437308 aaatg 11437312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 39698657 - 39698564
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||| | |||||||||    
T  39698657 ggctaaatcttagtgg-ccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagc 39698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 12389981 - 12390081
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||| |||||| ||||||| |||| ||||| |||||||||| ||||||||| |||||||    
T  12389981 gcaaaggggctaaatct-agggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcacttta 12390079  T
Q  110 gc 111  Q
    ||    
T  12390080 gc 12390081  T

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Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 43058885 - 43058804
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||||||||||||||||| || | |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  43058885 aaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagttaggggg 43058804  T

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Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 14999361 - 14999286
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagc 14999286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 37526877 - 37526975
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| | |||| | || |||||| | ||||||||||||||||| |||||||||||||||||| |||||||||    
T  37526877 gcaaaggggctaaatcttagggg-ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 7675458 - 7675558
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  |||||||||| ||||| |||||||| || ||||||||||||||||| |||||||| || || ||| |||||||||    
T  7675458 gcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacacttta 7675556  T
Q  110 gc 111  Q
    ||    
T  7675557 gc 7675558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 35067001 - 35067102
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| | ||||||| |||||| |||| ||||| ||| |||||||||||||| | |||||||    
T  35067001 gcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttta 35067100  T
Q  110 gc 111  Q
    ||    
T  35067101 gc 35067102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 45148682 - 45148582
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||||||  ||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| |||| | |||||||    
T  45148682 gcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcacttta 45148584  T
Q  110 gc 111  Q
    ||    
T  45148583 gc 45148582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 52827449 - 52827348
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||    ||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||    
T  52827449 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 52827350  T
Q  110 gc 111  Q
    ||    
T  52827349 gc 52827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 35595191 - 35595298
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaatt-atagtttttgtacttagggggtcaaaattgc-aagtttttaaaagttaaggggggaaaaatacactt 107  Q
    ||||||||||||||||||||||| ||||||||  |||||||| ||| ||||||||||||||||| |||||||| |||||||  ||||||||| |||||||    
T  35595191 gcaaaggggctaaatcttagggg-ccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactt 35595289  T
Q  108 tagcataaa 116  Q
    |||| ||||    
T  35595290 tagcctaaa 35595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 51685764 - 51685871
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||| |||||| |||| ||||| |||||||  ||||||||| | |||||||    
T  51685764 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 51685863  T
Q  110 gcataaaa 117  Q
    || |||||    
T  51685864 gcctaaaa 51685871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 52276162 - 52276240
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  52276162 gcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagtta 52276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 11436144 - 11436043
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||| ||||||||||||| |||||||| |||||||| ||||||   || ||||||||||||||||| |||||||| ||||||||| | |||||||    
T  11436144 gcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcacttta 11436045  T
Q  110 gc 111  Q
    ||    
T  11436044 gc 11436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 33088616 - 33088717
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||   ||||||| |||||||||||||||  ||||||||||||||||||||| || ||||  | ||||||| | |||||||    
T  33088616 gcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcacttta 33088715  T
Q  110 gc 111  Q
    ||    
T  33088716 gc 33088717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 45149969 - 45150068
Alignment:
Q  10 gcaaaggggctaaatcttaggggac-caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttt 108  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||| | ||||||    
T  45149969 gcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttt 45150067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 39153115 - 39153214
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||| ||  ||||||| |||||||||||| || |||| ||||||||||||||||| ||| ||||||||| |||| | |||||||    
T  39153115 gcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 43060013 - 43060112
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaa 117  Q
    ||||||||||| |||  ||||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||  ||||| ||| ||||||||||| |||||    
T  43060013 gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcctaaaa 43060112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 44404537 - 44404466
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||  |||||||| ||||||| |||||||    
T  44404537 ggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagtta 44404466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 35594317 - 35594218
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||| ||||||| | |||||| |||||||  |||||||||| |||||||||||||||||| ||||||| ||| |||||| | |||||||    
T  35594317 gcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttagggg-tcaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 35594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 36612954 - 36612854
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||| ||||||||||||||   |||||| ||||||||||||||| |    ||||||||||| ||||| |||||||||||||||||||| |||||||    
T  36612954 gcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagatc-caaaattgcaaatttttgaaagttaaggggggaaaaatgcacttta 36612856  T
Q  110 gc 111  Q
    ||    
T  36612855 gc 36612854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 43378712 - 43378792
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag 90  Q
    ||||||| ||||||||||||| |  ||||||| || |||||||||||||||| ||||||||| |||||||| |||||||||    
T  43378712 gcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaag 43378792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 45157208 - 45157296
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    ||||||||| |||||||||  ||  ||||||| |||||||||||| ||||||| ||||||||||||||||| ||| ||| |||||||||    
T  45157208 gcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaa 45157296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 39152033 - 39151934
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||  |   ||||||| |||||||||||| ||||||| ||||||| ||||||||| ||| ||||||||| |||||| |||||||    
T  39152033 gcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 25652816 - 25652746
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    ||||| |||||||||||||| || ||||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  25652816 gcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagttttt 25652746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 39222472 - 39222562
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    ||||| |||| ||||||||| || | || ||| |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  39222472 gcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaa 39222562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 41364930 - 41364830
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| ||| |||||||| ||||||||||||||||| |||||| ||||| ||||| | |||||||    
T  41364930 gcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 41364832  T
Q  110 gc 111  Q
    ||    
T  41364831 gc 41364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 52828069 - 52828178
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||| | ||||||||||||||||| ||| |||  ||||||||| | |||||||    
T  52828069 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T
Q  110 gcataaaaaa 119  Q
     | |||||||    
T  52828169 acctaaaaaa 52828178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 2940367 - 2940257
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||| || |||||||||||||| ||||||| |  ||||||| | ||| ||||||||||  |||  |||||||| |||| |||||||||||||||||||    
T  2940367 gcaaagaggttaaatcttaggggatcaaaattgttatttttgttcatagagggtcaaaatcacaacattttaaaacttaa-gggggaaaaatacacttta 2940269  T
Q  110 gcataaaaaata 121  Q
    ||  ||||||||    
T  2940268 gccaaaaaaata 2940257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 14999991 - 15000032
Alignment:
Q  47 ttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  14999991 ttttgtacttaggggatcaaaattgcaagtttttaaaagtta 15000032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 7674603 - 7674541
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||| ||||||||||||||||||   |||||||||||||||||||||||| |||||||||||    
T  7674603 caaaattgtagtttttgtacttagggcc-caaaattgcaagtttttaaaagtt-aggggggaaaa 7674541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 11190477 - 11190386
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||| ||| |||||||  ||||||||||  |||||   ||||||||||| ||||||||| |||||||| ||||| | |||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagc 11190386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 33088173 - 33088091
Alignment:
Q  6 agaagcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||| ||||||||||||| ||||  |||||| |||||||| || ||||| | | |||||| ||||||||| |||||||    
T  33088173 agaagcaaatgggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagtttttgaaagtta 33088091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 50681623 - 50681704
Alignment:
Q  30 gggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||| ||| |||||||| || |||| | | ||||||||||||||||| ||| ||||| |||||||| | |||||||||    
T  50681623 gggaccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagc 50681704  T

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Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 45156150 - 45156062
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||| || |||||||||| ||   |||||| |||||||||||| |||  ||||||||||| |||||||| ||| ||||||| ||||||    
T  45156150 caaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaa 45156062  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 40384827 - 40384748
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaa 89  Q
    |||||| |||||||| |||||||| ||||||| |||||||||||| |||| |   |||||||||| ||||| ||| ||||    
T  40384827 gcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaaattaa 40384748  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7983151 - 7983073
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||| |||| |||||||||||||  ||||||| | |||||  ||| ||||||| |||||||||||||| || |||||||    
T  7983151 gcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtta 7983073  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 41366130 - 41366230
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | |||||  |||||| ||||  ||||||||| |||||| ||||||| | |||||||| | |||||||    
T  41366130 gcaatggggctaaatcttagggg-gctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcacttta 41366228  T
Q  110 gc 111  Q
    ||    
T  41366229 gc 41366230  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 43377813 - 43377721
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||| ||||| | ||||||||||| ||||| ||||||  ||   |||||||||||| ||||||| ||||| ||| |||| |||| ||||||    
T  43377813 ctaaattttaggaggccaaaattataatttttatacttaaaggactaaaattgcaagtgtttaaaaattaagcgggaaaaagtacattttagc 43377721  T

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Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 28539819 - 28539917
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28539819 gcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

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Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 36486487 - 36486576
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36486487 gcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaaa 36486576  T

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Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 25523171 - 25523058
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||| | |||||||    
T  25523171 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 25523072  T
Q  110 gcataaaaaataat 123  Q
    || |||| ||||||    
T  25523071 gcctaaacaataat 25523058  T

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Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 28538778 - 28538669
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| | |||||||    
T  28538778 gcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcacttta 28538679  T
Q  110 gcataaaaaa 119  Q
    || |||||||    
T  28538678 gcctaaaaaa 28538669  T

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Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 16650854 - 16650955
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||| |||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  16650854 gcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 16650953  T
Q  110 gc 111  Q
    ||    
T  16650954 gc 16650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 36485402 - 36485302
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||| ||||||| ||| |||||||| |||||||    
T  36485402 gcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcacttta 36485303  T
Q  110 g 110  Q
    |    
T  36485302 g 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18486901 - 18487002
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| | |||| | ||||||||||| ||||||||||||||||| |||||||||||||| ||| | |||||||    
T  18486901 gcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcacttta 18487000  T
Q  110 gc 111  Q
    ||    
T  18487001 gc 18487002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 19753013 - 19752913
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||    
T  19753013 gcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 19752915  T
Q  110 gc 111  Q
    ||    
T  19752914 gc 19752913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 40255671 - 40255772
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||| ||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||| | |||||||    
T  40255671 gcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttta 40255770  T
Q  110 gc 111  Q
    ||    
T  40255771 gc 40255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 22940624 - 22940722
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||| ||||||| | |||||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||||    
T  22940624 aaaggggctaaattttaggggtc-aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 22940722  T

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Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 2686407 - 2686478
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  2686407 ggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

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Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 19754129 - 19754218
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||    
T  19754129 gcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaaa 19754218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 42195234 - 42195151
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||| |||| ||||| |||||||||||||    
T  42195234 gcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaaggggg 42195151  T

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Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 25056387 - 25056481
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||||  ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| | | |||||| | |||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagc 25056481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1796156 - 1796055
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||| ||| |||| ||||| ||||||| ||||||||||||||||| || |||| |||||||||||| ||||||| ||| |||||||| |||||||    
T  1796156 gcaaatgggttaattcttgggggatcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcacttta 1796057  T
Q  110 gc 111  Q
    ||    
T  1796056 gc 1796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 33158188 - 33158099
Alignment:
Q  22 aatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||| |||  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||||  |||||| |||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagc 33158099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 5778001 - 5777917
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  5778001 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggg 5777917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 24333015 - 24332916
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||| ||  ||||||| |||||||||||| || |||| ||||||||||||||||| ||| ||||||||| |||| | |||||||    
T  24333015 gcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 33160291 - 33160386
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||| |||  ||||||| |||||| | |||||||||||  |||||||||||||||| ||| |||||||||||||| | |||||||||    
T  33160291 gggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagc 33160386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 1797296 - 1797396
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||| |||||||||||| ||||||||||   || || | ||||||||||||||||||||| ||||  ||| |||||| |||||||    
T  1797296 gcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaa-agggaaaaaatccacttta 1797394  T
Q  110 gc 111  Q
    ||    
T  1797395 gc 1797396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 5778835 - 5778936
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| ||||||||||||  |||||||||||||||| |||||||  ||||||||| | |||||||    
T  5778835 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 5778934  T
Q  110 gc 111  Q
    ||    
T  5778935 gc 5778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 25055514 - 25055413
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||||||| |||||||| |||||||| ||| |||||| |||||||||||||   || |||||||  ||||||||| | |||||||    
T  25055514 gcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcacttta 25055415  T
Q  110 gc 111  Q
    ||    
T  25055414 gc 25055413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 25524097 - 25524158
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattg 71  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| || ||||||||    
T  25524097 gcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 20216762 - 20216861
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||| |||| |||| |||||||| |||||||||||  ||||| |  |||||||||||||||| ||| |||||||||||||| | |||||||    
T  20216762 gcaaatgggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 7311685 - 7311607
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggggg 95  Q
    |||||||||||||||| | |||||| |||||||||||||| || || ||| ||||||||||||| ||||||| ||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggg 7311607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 42196199 - 42196300
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||||||||| |||| | |||||||||||| ||| ||| |||| |  ||| ||||||||||||| |||||| ||| | |||||||    
T  42196199 gcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcacttta 42196298  T
Q  110 gc 111  Q
    ||    
T  42196299 gc 42196300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 18154570 - 18154495
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||  |||| | |||||||||    
T  18154570 caaaattgtagtttttgtacttagggg-tcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagc 18154495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 21835142 - 21835054
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    ||||||||| |||||||||||||  ||||||| |||||||||||| ||||||||||||||  ||| ||||| ||| |||  ||||||||    
T  21835142 gcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggggaaa 21835054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 25524141 - 25524216
Alignment:
Q  25 cttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||||| | |||||||| |||||||||||||||||||| ||||||| ||| ||||||||| ||| |||||| ||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaa 25524216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 38834188 - 38834090
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||  |||||||||||||  | |||||| |||||||||||| || ||| ||||||| |||| ||||||||||||||||||  |||||| |||||||    
T  38834188 gcaaaggaactaaatcttagggagctaaaattgtagtttttgtacataaggg-tcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcacttta 38834090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 18485247 - 18485139
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaa-------ttatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaata 102  Q
    ||||||||||||||||||||||| ||||||       || | |||||  ||||||||||| ||||||||||||||||| |||||||  |||| |||| |     
T  18485247 gcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtg 18485148  T
Q  103 cactttagc 111  Q
    |||||||||    
T  18485147 cactttagc 18485139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 1015586 - 1015497
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||||| |||| |||||||||   |||||| ||| ||||||||  |||||| |||||||| || ||||||||||||| ||| ||||||    
T  1015586 gcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaa 1015497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 20214273 - 20214197
Alignment:
Q  34 ccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||| |||||||||||| ||| | |  |||||||||||||||| ||||||||| |||||||| | |||||||||    
T  20214273 ccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttagc 20214197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 2186865 - 2186774
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||  |||||| |||||||||||| |||  |  ||||||||||| ||||| ||| || |||||| |||||| |||||||    
T  2186865 ggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 5962579 - 5962647
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagt 86  Q
    ||||||| ||||| | | ||||||||||||||||||||||||||  ||||||| ||| ||||| |||||    
T  5962579 gctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagt 5962647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 5730509 - 5730454
Alignment:
Q  45 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    ||||| |||||||||  | ||||||||||||||||| |||||||||||||| ||||    
T  5730509 gttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaa 5730454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 16650094 - 16650043
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggg 61  Q
    ||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  16650094 gcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggg 16650043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 38476725 - 38476788
Alignment:
Q  56 tagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaaa 119  Q
    ||||||||||||||  ||| ||||||||| |||||||| ||||| | ||||||||| |||||||    
T  38476725 tagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcctaaaaaa 38476788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 5730861 - 5730931
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||| |||| |||||||||||||  | ||||| | ||||| |||||||||||| |||||||| ||||||||    
T  5730861 gcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  38 aattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||| |||||||||||| ||||| | ||||||||||||||||| |||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 3307 - 3413
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||| ||||||||||||| | |||||||    
T  3307 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcacttta 3405  T
Q  110 gcataaaa 117  Q
    || |||||    
T  3406 gcctaaaa 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 7899886 - 7899995
Alignment:
Q  15 ggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcata 114  Q
    |||||||||||||||||| | |||||| |||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||| | ||||||||| ||    
T  7899886 ggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7899985  T
Q  115 aaaaataatg 124  Q
    ||||||||||    
T  7899986 aaaaataatg 7899995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 38839344 - 38839233
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| |||||||| ||||||||||| ||||||||  |||||||||||||||| ||| ||||||||| |||||| |||||||    
T  38839344 gcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttta 38839245  T
Q  110 gcataaaaaata 121  Q
    || |||||||||    
T  38839244 gcctaaaaaata 38839233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 38840492 - 38840593
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||| | |||||||    
T  38840492 gcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 38840591  T
Q  110 gc 111  Q
    ||    
T  38840592 gc 38840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 18904467 - 18904368
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||| | |||||||||    
T  18904467 aaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagc 18904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 11258810 - 11258911
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||  | ||| ||||| |||||||    
T  11258810 gcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcacttta 11258909  T
Q  110 gc 111  Q
    ||    
T  11258910 gc 11258911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 36449880 - 36449779
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||| |||| |||| ||||  ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||    
T  36449880 gcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 36449781  T
Q  110 gc 111  Q
    ||    
T  36449780 gc 36449779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 22587953 - 22588053
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||| || |||| ||||||||||||||||| ||||||| | |||||||||| |||||||    
T  22587953 gcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacata-ggggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcacttta 22588051  T
Q  110 gc 111  Q
    ||    
T  22588052 gc 22588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 22848293 - 22848192
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| |||||||  ||||||||||||||||| ||||||| ||||| |||| | |||||||    
T  22848293 gcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttta 22848194  T
Q  110 gc 111  Q
    ||    
T  22848193 gc 22848192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 23869534 - 23869634
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||  | |||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||| | |||||||    
T  23869534 gcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcacttta 23869632  T
Q  110 gc 111  Q
    ||    
T  23869633 gc 23869634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 7898793 - 7898694
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||||||| |||||||| |||||| | |||||||| ||  |||||||||||||||| |||||||||||| ||||| | |||||||    
T  7898793 gcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 13570558 - 13570657
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||| |||   |||||||||||||||| ||||||| |||  ||||||| |||||||||    
T  13570558 aaagggactaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagc 13570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 18797349 - 18797247
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg-ggaaaaatacacttt 108  Q
    ||||||||||||||| |||||||  ||||||| |||||||  |||||| |||||||||||||||||||||| ||||||| |||| |||||| | ||||||    
T  18797349 gcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcacttt 18797250  T
Q  109 agc 111  Q
    |||    
T  18797249 agc 18797247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 16446256 - 16446143
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||| ||| |||| ||| | ||||||| ||||||||||| ||| | ||| |||||||||||||||| |||||||||||  ||||||| |||||||    
T  16446256 gcaaatgggttaattcttggggtatcaaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcacttta 16446157  T
Q  110 gcataaaaaataat 123  Q
    || |||||||||||    
T  16446156 gcctaaaaaataat 16446143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 18905995 - 18906099
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaa 117  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||  |||||||||||||||| |||||||   |||||||| | ||||||||| |||||    
T  18905995 gctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcctaaaa 18906093  T
Q  118 aataat 123  Q
    | ||||    
T  18906094 actaat 18906099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 41878196 - 41878105
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgca---agtttttaaaagttaaggggggaaa 98  Q
    |||| |||||||||||||| ||| |||||||| |||||| ||||||||||||| ||||||||||   ||||||| |||||||||||||||||    
T  41878196 gcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggggggaaa 41878105  T

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Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 18300724 - 18300806
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||||||||||||||  |||||| | |||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  18300724 gcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagttaggggg 18300806  T

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Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 1034475 - 1034569
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||||  | ||||| | ||||| |||| ||||||| |||||||||| |||||| |||||||||||||||||| | |||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagc 1034569  T

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Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 802590 - 802690
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||  ||||||||| ||  ||||||| ||||||||||||  |||||| ||||||||||||||||| ||| || ||||||||||| |||||||||    
T  802590 gcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacacttta 802688  T
Q  110 gc 111  Q
    ||    
T  802689 gc 802690  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 18869006 - 18868925
Alignment:
Q  30 gggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||| ||||||| ||||||||||| ||||| || ||||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  18869006 gggatcaaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 18868925  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 26545520 - 26545596
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagt 86  Q
    |||||||||||||||||||| ||  |||||||||| |||||||| ||| |||||||||||||||| ||||| |||||    
T  26545520 gcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagt 26545596  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 36450920 - 36451004
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||| ||||| |||| |||| || ||||| |||||| ||||||||||||  ||||||||||||||||| |||||||||||||    
T  36450920 gcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggg 36451004  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 1033311 - 1033210
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||| ||    |||||||| |||| ||| |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||    
T  1033311 gcaatggggctaaatcttagaggggttaaattataattttggtatttaggggc-caaaattgcaagtttttaaaagtt-aggggggaaaagtacacttta 1033214  T
Q  110 gcat 113  Q
    ||||    
T  1033213 gcat 1033210  T

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Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 1093145 - 1093251
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||| ||   |||||| || ||||||||  |||||  ||| ||||||||  ||||||||||||||||||| |||||||||||||    
T  1093145 gcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaagggggg-aaaatacacttta 1093243  T
Q  110 gcataaaa 117  Q
    || |||||    
T  1093244 gcctaaaa 1093251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 11938796 - 11938894
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaa 117  Q
    ||||| |||||||||  |||||||||| |||||||||||||| |  ||||||||||||||||| ||||||| ||| |||||| | ||||||||| |||||    
T  11938796 gctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaaaa 11938894  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28618023 - 28617946
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||||||||||||||||| | ||||||  ||||||||||||| ||||| |||||||||||| |||| |||||||    
T  28618023 gcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 32739706 - 32739624
Alignment:
Q  29 ggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||||| ||||||| |||   ||||||||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagc 32739624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 41879219 - 41879300
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||||| |||||||   |||||| |||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||||    
T  41879219 gctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaa 41879300  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 13568072 - 13567975
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||| | ||  |||| ||||||| ||||||||||| |||||||| ||||||||||||||||| ||| |||   |||||||| |||||||||    
T  13568072 gcaaaggggctaattttt--gggatcaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8535655 - 8535733
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||||||| |||||||||  ||||||| |||||| | ||||||  || |||||||| |||||||||||||||||    
T  8535655 gcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta 8535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11257723 - 11257646
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||| |||||||||||||||| | |||||||| |||||||| |||||| ||| | |||||||||||||||| |||||||    
T  11257723 gcaatggggctaaatcttaggaggccaaaattgtagtttttatactta-gggtttaaaattgcaagtttttgaaagtta 11257646  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||| | |||||| || |||||||||||| |||| ||||||| ||||||||| |||||||  ||||||||| | |||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtactta-ggggccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 11996807 - 11996739
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    ||||||| |||||||||| | || |||||| |||||||||||| |||||||||||||| |||| |||||    
T  11996807 aaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaaatcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 24476868 - 24476920
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 87  Q
    ||||||| |||||||||||||||||||  ||||||| ||||||||||||||||    
T  24476868 caaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt 24476920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 810780 - 810850
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||||||||  ||||||||| ||  ||||||| ||||||||||||  |||||| |||||||||||||||||    
T  810780 gcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 22587602 - 22587525
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||| |||||||||||||||| |||||||| |||||||||||  ||||||  |||||||| || ||||| |||||||    
T  22587602 gcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 24475318 - 24475248
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||||  |||||| |||||||| |||||||| |||||||||||  |||||| ||||||||| |||||||    
T  24475318 gctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 18869168 - 18869241
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattg-caagtttttaaaagtta 88  Q
    ||||||||||||||||||  |||||| ||||||||||||||||  || |||||||| ||| ||||| |||||||    
T  18869168 gggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttttgaaagtta 18869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 8534683 - 8534600
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||||| |||||| |||| ||||||||||||| |||||| | ||||||  || ||||||||| |||||||| ||| |||||||||    
T  8534683 gcaaagaggctaattctt-ggggaccaaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaaggggg 8534600  T

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Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 1829602 - 1829685
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  1829602 gcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaggggg 1829685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10784695 - 10784593
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggg-gggaaaaatacacttt 108  Q
    |||||||||||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||    
T  10784695 gcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcacttt 10784596  T
Q  109 agc 111  Q
    |||    
T  10784595 agc 10784593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 16704496 - 16704602
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||| ||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||    
T  16704496 gcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcacttta 16704595  T
Q  110 gcataaa 116  Q
    || ||||    
T  16704596 gcctaaa 16704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 10785912 - 10786001
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    ||||||||||||||||||| |||   |||||| ||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  10785912 gcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtt-aggggggaaaaa 10786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 3721714 - 3721613
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||||||| |||  | ||||||| ||||| |||||||||||||||||||||||||||||| |||||||  ||||||||| | |||||||    
T  3721714 gcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 3721615  T
Q  110 gc 111  Q
    ||    
T  3721614 gc 3721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 7316293 - 7316394
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||| ||| |||||||| | ||||   || |||||||| ||||||||||||||||| |||||||||||||||||| | |||||||    
T  7316293 gcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7316392  T
Q  110 gc 111  Q
    ||    
T  7316393 gc 7316394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 8822798 - 8822893
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||||  | ||||| | ||||| |||||||||||||||||||||||||||||| |||||||| | ||||||| | |||||||||    
T  8822798 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagc 8822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 14822453 - 14822351
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaa 118  Q
    |||||||||||||| |||||||| |||||| | |||||| |||| ||||||||||||||||| ||| |||||||| ||||| | |||| |||| ||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcctaaaaa 14822354  T
Q  119 ata 121  Q
    |||    
T  14822353 ata 14822351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26575053 - 26575131
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||| | ||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  26575053 gcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 8659367 - 8659266
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  8659367 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8659268  T
Q  110 gc 111  Q
    ||    
T  8659267 gc 8659266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 27322065 - 27322180
Alignment:
Q  8 aagcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactt 107  Q
    ||||||||||||||| |||||||||   |||||| | ||||| |||||||||||| |||||||||||| |||| |||| | ||||||||||| | |||||    
T  27322065 aagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactt 27322163  T
Q  108 tagcataaaaaataatg 124  Q
    |||| || |||||||||    
T  27322164 tagcctataaaataatg 27322180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 7314981 - 7314871
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  ||||||| | |||||  ||||||||||  ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  7314981 gcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttaggggc-caaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7314883  T
Q  110 gcataaaaaata 121  Q
    ||  ||||||||    
T  7314882 gccaaaaaaata 7314871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 26574720 - 26574614
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||||| || |||||||||||||||||| |||||||  || || ||| | |||||||    
T  26574720 gcaaaggggctaaatcttaagggatcaaaatg-tagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcacttta 26574622  T
Q  110 gcataaaa 117  Q
    || |||||    
T  26574621 gcctaaaa 26574614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 8821967 - 8821869
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaa 116  Q
    |||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||| | ||||||||| ||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaaa 8821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 12382710 - 12382811
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||| |||||||| ||||| |||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||  || |||||| | |||||||    
T  12382710 gcaaaagggttaaatctttggggatcaaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcacttta 12382809  T
Q  110 gc 111  Q
    ||    
T  12382810 gc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14823583 - 14823664
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||||||||||||| |||||||| |||||| |||||||| ||||  |||||||||||||||| ||| ||||||||| |||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaa 14823664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 27437930 - 27437829
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| |||||||||||||||  ||||||| |||||||| |   ||||||| ||||||||||| ||||| |||||||||||| ||||| | |||||||    
T  27437930 gcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 27437831  T
Q  110 gc 111  Q
    ||    
T  27437830 gc 27437829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 5658858 - 5658759
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||| |||| ||||||| |||||||||||| |||||    ||||||  || ||||||||| |||||||||||||||| |||||||    
T  5658858 gcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 8660211 - 8660303
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||  | ||||| | ||||| ||||||||||| |||||||||||||||||| ||||||| | |||||||| | |||||||||    
T  8660211 gctaaatcttaggggggctaaattgtggttttggtacttagggg-tcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagc 8660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 17496900 - 17496786
Alignment:
Q  10 gcaaaggggctaaatcttagggga-ccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag----gggggaaaaataca 104  Q
    |||||| || |||||||||||||  ||||||||  ||||||||||||||| |||| ||||||| |||||||| ||||||| |    ||||||||||| ||    
T  17496900 gcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttagggggagggggaaaaatgca 17496801  T
Q  105 ctttagcataaaaaa 119  Q
    ||||||| |||||||    
T  17496800 ctttagcctaaaaaa 17496786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 3722541 - 3722613
Alignment:
Q  45 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaa 117  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||| || ||||||| | ||||||||| |||||    
T  3722541 gttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcctaaaa 3722613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 34834578 - 34834677
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | |||||  |||||||| | |||||||||||||||||| ||||||| || ||||||| | |||||||    
T  34834578 gcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 6840294 - 6840210
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    ||||||||  |||||||||| ||  ||||||||||||||||||| ||| |||| |||||| |||| ||||| ||| |||||||||    
T  6840294 gcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg 6840210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 12350898 - 12350823
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 87  Q
    ||||||||||||||||||||||   |||||| |||||||| ||| || |||||||||||||||||||| | ||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacata-ggggtcaaaattgcaagtttattaaagtt 12350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6842291 - 6842390
Alignment:
Q  19 ctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaa 118  Q
    |||||| ||| || || |||||| ||||||||| || ||||||| ||||||||||| ||||| ||| |||  ||||||||| | ||||||||| ||||||    
T  6842291 ctaaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcctaaaaa 6842390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 3333250 - 3333180
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||||| ||||||||| |||||  ||||||||||||||||| | | |||||||||||| |||||| |||||    
T  3333250 gcaaagaggctaaatcgtagggagccaaaattatagtttttattcatagggggtcaaatttgcaatttttt 3333180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 26717127 - 26717183
Alignment:
Q  54 cttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttag 110  Q
    |||| |||||||||||||||||||| | ||| |||||||||||||| | ||||||||    
T  26717127 cttaaggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 16703666 - 16703571
Alignment:
Q  13 aaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||| ||||| ||||||| | |||||| ||||||||||| |||  || |||||||||||||||||| |||| ||  ||||||||| | |||||||||    
T  16703666 aaggggttaaattttagggggctaaaattgtagtttttgtattta-tggatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagc 16703571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 30494658 - 30494575
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||||||||||||||||||||   ||||||| ||||||||| ||| ||||| | |||||| | || ||||| ||||||| ||||    
T  30494658 gcaaaggggctaaatcttaggaagccaaaatcatagtttttatacatagggtgccaaaatcgtaactttttgaaagttaggggg 30494575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 3333025 - 3333095
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    ||||||||||||||| |||| ||   |||||| |||||||||||| ||||||| |||||| |||| |||||    
T  3333025 gcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaacttttt 3333095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 27443801 - 27443740
Alignment:
Q  61 ggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaaataa 122  Q
    |||||||||||||| ||||| ||| ||||||||| |||| | ||||| ||| ||||||||||    
T  27443801 ggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcctaaaaaataa 27443740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 29473179 - 29473090
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||||||| || |||| | || |||||||| |  ||||||| | |||||   ||||||||||| ||||||||| ||||||||||||||    
T  29473179 gcaaaggggccaattcttggagggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaa 29473090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 1828816 - 1828740
Alignment:
Q  35 caaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||| |||||| |||||    | ||||||||||| ||||||||| |||| |||| |||||| |||||||||    
T  1828816 caaaattataatttttgaacttaaaaagccaaaattgcaaatttttaaaaattaaaggggaaaaaatgcactttagc 1828740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 16415581 - 16415633
Alignment:
Q  59 ggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| |||| ||||||||| |||||||| ||||| | |||||||||    
T  16415581 ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagc 16415633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 19590 - 19484
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||| |||| ||| |||||||||||||||| |||||||    
T  19590 gcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcacttta 19491  T
Q  110 gcataaa 116  Q
    || ||||    
T  19490 gcctaaa 19484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 335 - 234
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||| |||||||||||||| ||| | |||||||    
T  335 gcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcacttta 236  T
Q  110 gc 111  Q
    ||    
T  235 gc 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 977 - 1058
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaagg 91  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||| || |||  ||||||||||| ||||||||||||||||    
T  977 gcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1541 - 1440
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||  ||||||||| |||||||||    
T  1541 gcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacacttta 1442  T
Q  110 gc 111  Q
    ||    
T  1441 gc 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 17572 - 17471
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||| ||| |||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | |||||||    
T  17572 gcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcacttta 17473  T
Q  110 gc 111  Q
    ||    
T  17472 gc 17471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18775 - 18876
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||||||| ||| ||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||| | ||| |||| | |||||||    
T  18775 gcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcacttta 18874  T
Q  110 gc 111  Q
    ||    
T  18875 gc 18876  T

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Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 31659725 - 31659635
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaa 100  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||    
T  31659725 gcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaa 31659635  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 18372457 - 18372544
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||    
T  18372457 caaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatt-aggggggaaaa 18372544  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 11662550 - 11662649
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||| ||| | |  |||||||||||||||| |||||||||||||||||||| |||||||    
T  11662550 gcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

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Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 22629588 - 22629484
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaag---gggggaaaaatacact 106  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||| ||||||||| ||| |||||   ||||||||||| ||||    
T  22629588 gcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcact 22629489  T
Q  107 ttagc 111  Q
    |||||    
T  22629488 ttagc 22629484  T

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Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 18371518 - 18371425
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||| | |||||||| | |||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagc 18371425  T

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Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 48934902 - 48935003
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||| ||| |||||||| |||||||    
T  48934902 gcaaatgggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcacttta 48935001  T
Q  110 gc 111  Q
    ||    
T  48935002 gc 48935003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 14999154 - 14999228
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaa 84  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  14999154 gcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa 14999228  T

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Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 3227593 - 3227694
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||| | |||||||    
T  3227593 gcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 3227692  T
Q  110 gc 111  Q
    ||    
T  3227693 gc 3227694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 7500556 - 7500456
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||||||| |||||||| | |||| | ||||||| || |||||||||||||||||| ||||||||| |||||||| | |||||||    
T  7500556 gcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaag-ggggaaaagtgcacttta 7500458  T
Q  110 gc 111  Q
    ||    
T  7500457 gc 7500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 11658480 - 11658392
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||||||||| ||||  |||||||||||| |||||||||||| |||||||  ||||||||| |||||| ||||||||||||||||||    
T  11658480 caaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaa 11658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 17781763 - 17781663
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||    ||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||    
T  17781763 gcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 17781664  T
Q  110 g 110  Q
    |    
T  17781663 g 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 22630452 - 22630552
Alignment:
Q  11 caaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttag 110  Q
    ||||| |||| ||||||||||| | |||||| ||||||||||| |||||||| ||||||||||||||||| ||||||| || ||||||| | ||||||||    
T  22630452 caaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttag 22630551  T
Q  111 c 111  Q
    |    
T  22630552 c 22630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 42886285 - 42886384
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| ||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||| | || ||||| | |||||||    
T  42886285 gcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7501851 - 7501965
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||| |||||| ||| |||||||| | |||||  ||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  7501851 gcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 7501950  T
Q  110 gcataaaaaataatg 124  Q
    || ||| ||| ||||    
T  7501951 gcctaataaaaaatg 7501965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 47369883 - 47369805
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| | ||  |||||||||||||||| |||||||    
T  47369883 gcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagtta 47369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 17782558 - 17782653
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||| | |||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 17782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 31949424 - 31949313
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| |||||||||||| ||||||||||||||||| ||| ||| || ||||||| | |||||||    
T  31949424 gcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 31949325  T
Q  110 gcataaaaaata 121  Q
    || |||| ||||    
T  31949324 gcctaaataata 31949313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 31949801 - 31949902
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | ||||| ||| |||||||| ||||||||||||||||| ||||||| |||||||| | | |||||||    
T  31949801 gcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttta 31949900  T
Q  110 gc 111  Q
    ||    
T  31949901 gc 31949902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 46482699 - 46482599
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| | ||||||||||||||  ||||||||||||||||||| |||||||||||| || ||| ||||| ||| ||| | || ||||||| |||||||    
T  46482699 gcaaaggagataaatcttaggggattaaaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcacttta 46482600  T
Q  110 g 110  Q
    |    
T  46482599 g 46482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 128600 - 128699
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| |||||| |||||||||||  | ||||| | ||||| |||||||||||||||||||||||| ||||| ||||||| || ||||||| | |||||||    
T  128600 gcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 47525366 - 47525467
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||||||||||||  | ||||| | |||||  |||||||||||  |||||||||||||||| |||||||  ||||||||| | |||||||    
T  47525366 gcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T
Q  110 gc 111  Q
    ||    
T  47525466 gc 47525467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 3227209 - 3227121
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    |||| |||||||||||||| |||  | ||||| | ||||| |||||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  3227209 gcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggggggaaa 3227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 30439357 - 30439445
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || ||||   ||||||| | || ||||| |||||||||||| ||||    
T  30439357 gcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaaggggagaaa 30439445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 31661018 - 31661086
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    ||||| ||||||||| ||||||||||||||||||| ||  ||||||||||||||| ||||| |||||||    
T  31661018 taaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagtta 31661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 127431 - 127338
Alignment:
Q  16 gggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||||| | ||| || | ||||| |||||||||||  ||||||||||||||||| |||||| ||||||||||| | |||||||||    
T  127431 gggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagc 127338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 21505516 - 21505417
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||  | ||||| |||||| |||| ||||| |||||||  ||||||||| | |||||||    
T  21505516 gcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcacttta 21505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 769491 - 769414
Alignment:
Q  34 ccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||| ||| |||  || |||||| | |||||||||    
T  769491 ccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagc 769414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 47524592 - 47524538
Alignment:
Q  45 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||  |||||||||    
T  47524592 gttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaa 47524538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 48933759 - 48933690
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaa 89  Q
    ||||||||| |||| ||||||| ||||||||||   || ||| |||||||||||||||||||||| ||||    
T  48933759 taaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattgcaagtttttaaaatttaa 48933690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 20163588 - 20163656
Alignment:
Q  43 tagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||| ||||| | ||||||||||||||||| ||||||| ||| ||| || | |||||||||    
T  20163588 tagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagc 20163656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 34174017 - 34174082
Alignment:
Q  45 gtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||| |||||||||||| |||||||||||| |||| |||| | ||||||||||| | |||||||||    
T  34174017 gttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagc 34174082  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 34352795 - 34352855
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    |||||||||| || ||||||||||||||| |||||||| |||  |||||| | ||||||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagttttt 34352855  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 46483551 - 46483591
Alignment:
Q  54 cttagggggtcaaaattgcaagtttttaaaagttaaggggg 94  Q
    |||||||| |||||||| |||||||||||||||||| ||||    
T  46483551 cttaggggatcaaaattacaagtttttaaaagttaaagggg 46483591  T

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Target: scaffold0019 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 61458 - 61559
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||| |||||| | |||||||    
T  61458 gcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcacttta 61557  T
Q  110 gc 111  Q
    ||    
T  61558 gc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 60192 - 60091
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||| ||||||  ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||  || |||||| | |||||||    
T  60192 gcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcacttta 60093  T
Q  110 gc 111  Q
    ||    
T  60092 gc 60091  T

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Target: scaffold0294 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 5442 - 5538
Alignment:
Q  15 ggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||||||||| |||  ||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||||||||    
T  5442 ggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagc 5538  T

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Target: scaffold0294; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 4539 - 4456
Alignment:
Q  15 ggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||||||| |||||||   |||||| || |||||||||||| ||||  ||||||| |||||||| ||| || |||||||||||    
T  4539 ggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaatt-aggggggaaaa 4456  T

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Target: scaffold0059 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3770 - 3699
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 88  Q
    |||||||||||||||||| ||||||||||||| | |||| |||||| ||||||||||||||||| |||||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

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Target: scaffold0059; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 4729 - 4817
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaa 98  Q
    |||| |||||||||  |||| ||  ||||||| |||||| |||| |||||||| |||||||||| |||||||||||||| || ||||||    
T  4729 gcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaa 4817  T

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Target: scaffold0112 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 37244 - 37149
Alignment:
Q  15 ggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgc-aagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||| || |||||||||| ||  ||||||||| | |||||||||    
T  37244 ggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagc 37149  T

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Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 49432 - 49533
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    ||||||| |||||||||||||||  ||||||| |||||||| |   ||||||| ||||||||||| ||||| |||||||||||| ||||| | |||||||    
T  49432 gcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcacttta 49531  T
Q  110 gc 111  Q
    ||    
T  49532 gc 49533  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 43560 - 43621
Alignment:
Q  61 ggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaaaaataa 122  Q
    |||||||||||||| ||||| ||| ||||||||| |||| | ||||| ||| ||||||||||    
T  43560 ggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcctaaaaaataa 43621  T

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Target: scaffold0093 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 2472 - 2564
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaag-tttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||| |||||| |||||||  | ||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||| | |||||||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 7095 - 7187
Alignment:
Q  18 gctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaag-tttttaaaagttaaggggggaaaaatacactttagc 111  Q
    |||||||| |||||| |||||||  | ||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||| | |||||||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

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Target: scaffold0186 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 23181 - 23082
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||| ||||||||| ||||||||| ||| ||| | ||||| |||||||| ||| ||||||||||||||||| |||||||  ||||||||| | |||||||    
T  23181 gcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 23084  T

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Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 48409 - 48341
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagttttt 80  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  48409 gcaaagggaataaatcttaggggaccaaaattatagtttttgtacata-ggggtc-aaattgcaagttttt 48341  T

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Target: scaffold0045; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 49109 - 49172
Alignment:
Q  36 aaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaa 99  Q
    |||||| |||||||  |||||||| || ||||||||||||||||||||||||||||| ||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaa 49172  T

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Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 7414 - 7515
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacacttta 109  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||| |||||||||||||| | || ||||| ||| |||  |||||| || | |||||||    
T  7414 gcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcacttta 7513  T
Q  110 gc 111  Q
    ||    
T  7514 gc 7515  T

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Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 18828 - 18730
Alignment:
Q  12 aaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttag 110  Q
    ||||||| ||| ||||||| |  ||||||| |||||||||| | |||| ||||||||| |||| ||||||||||||||| ||| |||| | ||||||||    
T  18828 aaaggggttaattcttaggaggtcaaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

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Target: scaffold0321; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 19408 - 19499
Alignment:
Q  10 gcaaaggggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaatt-gcaagtttttaaaagttaaggggggaaaaa 100  Q
    ||||| ||||||| ||||  ||||| ||||||||| ||||||| | |||||| |||||||| |||| ||||| |||||||||||| ||||||    
T  19408 gcaaaagggctaattcttgagggactaaaattataatttttgttcataggggatcaaaatttgcaactttttgaaagttaaggggagaaaaa 19499  T

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Target: scaffold0586 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 6438 - 6329
Alignment:
Q  17 ggctaaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagcataaa 116  Q
    ||||||||||||||||  ||||||| |||||||||||| |||||||  ||||| | || ||||| ||| ||||||| |||||| | ||||||| | ||||    
T  6438 ggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaacctaaa 6339  T
Q  117 aaataatgaa 126  Q
     |||| ||||    
T  6338 taatattgaa 6329  T

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Target: scaffold0369 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 13283 - 13194
Alignment:
Q  20 taaatcttaggggaccaaaattatagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaaggggggaaaaatacactttagc 111  Q
    ||||||||||||||| |||||| ||||||| |||| |||| |||||||||  ||| ||||| |||||||  ||||||||| | |||||||||    
T  13283 taaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagtta--gggggaaaagtgcactttagc 13194  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 15702 - 15740
Alignment:
Q  55 ttagggggtcaaaattgcaagtttttaaaagttaagggg 93  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  15702 ttagggggtcaaaattgcaactttttaaaagttaagggg 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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