View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11653_low_14 (Length: 280)

Name: NF11653_low_14
Description: NF11653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11653_low_14
NF11653_low_14
[»] chr6 (8 HSPs)
chr6 (21-270)||(6920902-6921149)
chr6 (23-189)||(6954147-6954316)
chr6 (20-190)||(6942589-6942767)
chr6 (24-108)||(6934945-6935029)
chr6 (24-156)||(6947493-6947628)
chr6 (26-91)||(17369931-17369996)
chr6 (46-107)||(20770921-20770982)
chr6 (152-192)||(17370022-17370062)
[»] chr7 (12 HSPs)
chr7 (24-156)||(1985617-1985751)
chr7 (24-86)||(15571632-15571694)
chr7 (34-107)||(14076928-14077001)
chr7 (34-107)||(14386956-14387029)
chr7 (25-74)||(13416657-13416706)
chr7 (25-169)||(18514468-18514618)
chr7 (34-106)||(22064356-22064428)
chr7 (34-101)||(19350803-19350870)
chr7 (24-98)||(19597401-19597475)
chr7 (34-72)||(22524940-22524978)
chr7 (203-247)||(15571409-15571453)
chr7 (34-106)||(18982666-18982738)
[»] scaffold0354 (1 HSPs)
scaffold0354 (24-182)||(7734-7887)
[»] chr4 (5 HSPs)
chr4 (34-107)||(53775101-53775174)
chr4 (34-72)||(2911335-2911373)
chr4 (34-104)||(11970722-11970792)
chr4 (130-191)||(53775166-53775226)
chr4 (37-105)||(11981422-11981490)
[»] chr2 (4 HSPs)
chr2 (34-94)||(18908517-18908577)
chr2 (34-94)||(18913265-18913325)
chr2 (25-99)||(14515139-14515217)
chr2 (34-101)||(20712266-20712331)
[»] chr5 (1 HSPs)
chr5 (26-95)||(18964561-18964630)
[»] scaffold0097 (1 HSPs)
scaffold0097 (34-101)||(16105-16170)
[»] chr8 (1 HSPs)
chr8 (34-98)||(27618727-27618791)


Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 6921149 - 6920902
Alignment:
Q  21 cactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatggt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921149 cactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatggt 6921050  T
Q  121 acaatgtattttgtgataatttcatatcatggttttgatttgattatattgttgaatgattatctgttttattaactgtgaattttctcaattttattta 220  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6921049 acaatgtattttgtgataatt--atatcatggttttgatttgattatattgttgaatgattatctgttttattaactgtgaattttctcgattttattta 6920952  T
Q  221 ctgttctaattttgagtttttatgtgtccattgatagaatgcaccctttg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6920951 ctgttctaattttgagtttttatgtgtccattgatagaatgcaccctttg 6920902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 6954316 - 6954147
Alignment:
Q  23 ctgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttc-gatgatttacttgtttgaatttgtgttagcttgtgtatggta 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  6954316 ctgccaagggatatgttgaaagcttggtatcgacttcttgaaagtatgttttttttccgatgatttacttgtttgaatttgtgttagcttgtctatggta 6954217  T
Q  122 caatgtattttgtga-taatttcatatcatggttttgatttgattatattg-ttgaatgattatctgttt 189  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6954216 caatgtattttgtgattattttcataccatggttttgatttgattatattgtttgaatgattatctgttt 6954147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 6942767 - 6942589
Alignment:
Q  20 ccactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgt-------ttgaatttgtgttagcttg 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| | | |       |||||||||||||||||||    
T  6942767 ccactgccaagggatatgttgaaagcttggtatcaacttcttgaaagtaagtttttgtttgattatttccatatcatggttttgaatttgtgttagcttg 6942668  T
Q  113 tgtatggtacaatgtattttgtgataattt-catatcatggttttgatttgattatattgttgaatgattatctgtttt 190  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6942667 tgtatggtagaatgtattttgtgattatttccatatcatggttttgattttaatatattgttgaatgattatctgtttt 6942589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 6935029 - 6934945
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttag 108  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||||||||||||    
T  6935029 tgccaagggatatgttgaaagtttggtatcgacttcttgaaggtaattttctcttcaatgatttacttgtttgaatttgtgttag 6934945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 6947628 - 6947493
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatg--gta 121  Q
    |||||| ||||||||||||||||||| |||||  | ||||| |||||||| | || ||||||||||||||||| ||||| ||||| || ||||||  |||    
T  6947628 tgccaatggatatgttgaaagcttggcatcgatattttgaaggtaagtttctcttggatgatttacttgtttgtatttgagttagtttatgtatgatgta 6947529  T
Q  122 caatgtattttgtga-taatttcatatcatggtttt 156  Q
    |||| |||| ||||| || ||||| |||||||||||    
T  6947528 caatatattgtgtgattattttcaaatcatggtttt 6947493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 17369931 - 17369996
Alignment:
Q  26 ccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttactt 91  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||  | |||||||||||||||    
T  17369931 ccaagggctatgttgaaagcttggtatctacttgttgaaagtaagttactcttcgatgatttactt 17369996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 20770921 - 20770982
Alignment:
Q  46 ttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 107  Q
    ||||||||||| | |||||||||||||  | |||||||||||||||||||||||||||||||    
T  20770921 ttggtatcgacctgttgaaagtaagttcctcttcgatgatttacttgtttgaatttgtgtta 20770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 17370022 - 17370062
Alignment:
Q  152 gttttgatttgattatattgttgaatgattatctgttttat 192  Q
    ||||||||||||||  |||||||||||||||||| ||||||    
T  17370022 gttttgatttgattgcattgttgaatgattatctattttat 17370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 1985751 - 1985617
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatg-gtac 122  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||  |||    
T  1985751 tgccaagggatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttagtttgtgtatgtatac 1985652  T
Q  123 aatgtattttgtga-taatttcatatcatggtttt 156  Q
    ||| |||| ||||| || ||||| |||||||||||    
T  1985651 aatatattgtgtgattattttcaaatcatggtttt 1985617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 15571694 - 15571632
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatt 86  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15571694 tgccaggggatatgttgaaagcttggtatcgacttcctgaaagtaagtttttgttcgatgatt 15571632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 14076928 - 14077001
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 107  Q
    ||||||||||||||||||||||||| | |||||||||||  | ||||||||||||| ||||||||| |||||||    
T  14076928 tatgttgaaagcttggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14077001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 14386956 - 14387029
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 107  Q
    ||||||||||||||||||||||||| | |||||||||||  | ||||||||||||| ||||||||| |||||||    
T  14386956 tatgttgaaagcttggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14387029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 13416706 - 13416657
Alignment:
Q  25 gccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttt 74  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  13416706 gccaagggatatgttgaaagcttggtatcgacttcaagaaagtatgtttt 13416657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 18514618 - 18514468
Alignment:
Q  25 gccaagggatatgttgaaagcttggtatc----gacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatg-g 119  Q
    ||||||| ||||||||| |||||| ||||    ||||| | ||||||||||   |||||  ||||||||||||||||||||| ||||  | ||||  | |    
T  18514618 gccaaggcatatgttgagagcttgatatctacagacttgtggaaagtaagtccctgttccgtgatttacttgtttgaatttgagttaaatcgtgtccgtg 18514519  T
Q  120 tacaatgtattttgtgataattt-catatcatggttttgatttgattatat 169  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||||||||    
T  18514518 tacaatgtatcgtgtcattattttcatatcatggttttgatttgattatat 18514468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 22064356 - 22064428
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtt 106  Q
    |||| |||||| ||||| |||  || |||||||||||||| | | ||| ||||||||||||||||||||||||    
T  22064356 tatgatgaaaggttggtttcgtattgttgaaagtaagtttctttacgacgatttacttgtttgaatttgtgtt 22064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 19350870 - 19350803
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 101  Q
    |||||||||||||| || || || |||||||||||||||| | ||  |||||||| ||||||||||||    
T  19350870 tatgttgaaagcttagtttcaacctcttgaaagtaagtttctctttaatgatttaattgtttgaattt 19350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 19597475 - 19597401
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaa 98  Q
    |||||| | |||||||||||||||||| ||||||  || ||||||||||| | ||| |  |||||||||||||||    
T  19597475 tgccaatgaatatgttgaaagcttggtttcgactaattaaaagtaagtttcttttcaacaatttacttgtttgaa 19597401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 22524978 - 22524940
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtt 72  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  22524978 tatgttgaaagcttggtttcaacttcttgaaagtaagtt 22524940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 15571453 - 15571409
Alignment:
Q  203 ttttctcaattttatttactgttctaattttgagtttttatgtgt 247  Q
    |||| |||||||||||||||||| |||||||||| ||||| ||||    
T  15571453 ttttttcaattttatttactgttttaattttgagcttttaagtgt 15571409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 18982738 - 18982666
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtt 106  Q
    ||||||||||||||||| ||||||  |||||||||| ||| | ||| |  ||||||||| |||||||| ||||    
T  18982738 tatgttgaaagcttggtttcgactagttgaaagtaaatttcttttcaactatttacttgattgaatttttgtt 18982666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 7734 - 7887
Alignment:
Q  24 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatggtaca 123  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||| | ||||| ||||| |||||||||||||||||| |||||| ||||     |||||    
T  7734 tgccaagggatatgtagaaagcttggtaccgacttcttgaaggtatg-ttttgctcgatcatttacttgtttgaatttttgttagtttgt-----gtaca 7827  T
Q  124 atgtattttgtga-taatttcatatcatggttttgatttgattatattgttgaatgatta 182  Q
     ||| || ||||| || |||||||| ||||||||||||||||||||||||| || |||||    
T  7828 ttgtcttgtgtgattattttcatattatggttttgatttgattatattgttcaacgatta 7887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 53775101 - 53775174
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 107  Q
    |||||||||||||||||||| || | |||||||||||||  | ||| | |||||||||||||||||||||||||    
T  53775101 tatgttgaaagcttggtatcaacgtgttgaaagtaagttcctcttccaagatttacttgtttgaatttgtgtta 53775174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 2911335 - 2911373
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtt 72  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2911335 tatgtagaaagcttggtatcaacttcttgaaagtaagtt 2911373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 11970792 - 11970722
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtg 104  Q
    ||||||||||||||||| | |  || |||||||||||||| | | |||  |||||||||||||||||||||    
T  11970792 tatgttgaaagcttggttttgtattgttgaaagtaagtttctctacgacaatttacttgtttgaatttgtg 11970722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 53775166 - 53775226
Alignment:
Q  130 tttgtgataatttcatatcatggttttgatttgattatattgttgaatgattatctgtttta 191  Q
    |||||| |||||| |||| || |||||||||||||| ||||||||||||||| ||| |||||    
T  53775166 tttgtgttaattt-atatgatagttttgatttgattgtattgttgaatgattctctctttta 53775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 11981490 - 11981422
Alignment:
Q  37 gttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgt 105  Q
    |||||||||||||| |||  || |||||||||||||| | | | |  ||||||||||||||||||||||    
T  11981490 gttgaaagcttggtttcgtattgttgaaagtaagtttctctacaacaatttacttgtttgaatttgtgt 11981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 18908577 - 18908517
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtt 94  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||||||||| |||||    
T  18908577 tatgttgaaagcttggtttcaacctcttgaaagtaagtttttcttcgatgatttaattgtt 18908517  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 18913325 - 18913265
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtt 94  Q
    |||||||||||||||||||| || |||||||||||||||| | ||| |||||||| |||||    
T  18913325 tatgttgaaagcttggtatcaacctcttgaaagtaagtttctcttcaatgatttaattgtt 18913265  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 14515139 - 14515217
Alignment:
Q  25 gccaagggatatgttgaaagcttggtatcgac----ttcttgaaagtaagtttttgttcgatgatttacttgtttgaat 99  Q
    ||||||| |||||||||||| ||| |||||||    || || ||||||||||  ||||| |||||||||||||||||||    
T  14515139 gccaaggcatatgttgaaagtttgatatcgacagacttgttaaaagtaagttcctgttcaatgatttacttgtttgaat 14515217  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 20712331 - 20712266
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 101  Q
    ||||| ||||||||||| || |||| |||||||||||||  | ||  |||||||||||||||||||||    
T  20712331 tatgtcgaaagcttggtttcaacttgttgaaagtaagttcctctt--atgatttacttgtttgaattt 20712266  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 18964630 - 18964561
Alignment:
Q  26 ccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgttt 95  Q
    ||||||| ||||||||||||||| |||| |||| |||||||||||||  | || ||||| ||||||||||    
T  18964630 ccaagggctatgttgaaagcttgatatctacttgttgaaagtaagttcctctttgatgacttacttgttt 18964561  T

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Target: scaffold0097 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 16170 - 16105
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 101  Q
    ||||| ||||||||||| || |||| |||||||||||||  | ||  |||||||||||||||||||||    
T  16170 tatgtcgaaagcttggtttcaacttgttgaaagtaagttcctctt--atgatttacttgtttgaattt 16105  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 27618727 - 27618791
Alignment:
Q  34 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaa 98  Q
    ||||||||||||||||| || | ||||||||||||||||  | || || || |||||||||||||    
T  27618727 tatgttgaaagcttggtttcaatttcttgaaagtaagttcctatttgacgaattacttgtttgaa 27618791  T

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