View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11653_low_18 (Length: 226)
Name: NF11653_low_18
Description: NF11653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11653_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 26828628 - 26828812
Alignment:
| Q |
19 |
atcatattatacaatgacaagtgatggatgaggaatctgcaataaccatatactcatcctcggagaagattgtgacacaatgaaatgtttcttatttttc |
118 |
Q |
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| T |
26828628 |
atcatattatacaatgacaagtgatggatgaggaatctgcaataaccatatactcatcctcggagaagattgtgacacaatgaaatgtttcttatttttc |
26828727 |
T |
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| Q |
119 |
caatagaacaataaagaaccaaataaaatacaaaatgtaactgaaaactgtcaaactattccagagcacgcgaggcacttgctgc |
203 |
Q |
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||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26828728 |
caatagaccaataaagaatcaaagaaaatacaaaatgtaactgaaaactgtcaaactattccagagcacgcgaggcacttgctgc |
26828812 |
T |
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