View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11654_high_35 (Length: 242)
Name: NF11654_high_35
Description: NF11654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11654_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23889701 - 23889923
Alignment:
| Q |
1 |
aataaaacaatagagtcataatgcaaaagctttggattaaataaatatgttcataaaatttaatgctataatttgttgcattttcattacttgaaggaca |
100 |
Q |
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| T |
23889701 |
aataaaacaatagagtcataatgcaaaagctttggattaaataaatatgttaataaaatttaatgctataatttgttgcattttcattacttgaaggaca |
23889800 |
T |
|
| Q |
101 |
gtttttggaacaaatgagagaaatatattggtttatgggctaaagaattttgaacaagttgattatgggagtaaccacgatttgttgtaaaataattagt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
23889801 |
gtttttggaacaaatgagagaaatatattggtttatgggctaaagaattttgaacaagttgattatgggagtaaccacgatttgtggtaaaataattagt |
23889900 |
T |
|
| Q |
201 |
agtcactcaattatggtaaattg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
23889901 |
agtcactcaattatggtaaattg |
23889923 |
T |
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