View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11654_high_38 (Length: 239)
Name: NF11654_high_38
Description: NF11654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11654_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33345614 - 33345836
Alignment:
| Q |
1 |
ataaatatttctacgaacttgacctcagtaacaacaaacttgtgggagaatttccacaagaagttcttgattctaaacaactagtttttctagacctcag |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33345614 |
ataaatatttctacgaacttgacctcagtaacaacaaacttgtaggagaatttccaaaagaagttcttgattctaaacaactagtttttctagacctcag |
33345713 |
T |
|
| Q |
101 |
gtttaatcaactcaccggttcagttccatcgcagttatttaaaaaagatcttgacgtaattttcataaacaacaacaagttcagtcaatgtttacctgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33345714 |
gtttaatcaactcaccggttcagttccatcgcagttatttaaaaaagatcttgacgtaattttcataaacaacaacaagttcagtcaatgtttacctgag |
33345813 |
T |
|
| Q |
201 |
aattttgggtccaccccagcaag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
33345814 |
aattttgggtccaccccagcaag |
33345836 |
T |
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