View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11654_low_1 (Length: 2505)
Name: NF11654_low_1
Description: NF11654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11654_low_1 |
 | |
|
| [»] scaffold0132 (2 HSPs) |
| | |
|
| [»] scaffold0011 (2 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 1839; Significance: 0; HSPs: 46)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 1839; E-Value: 0
Query Start/End: Original strand, 348 - 2489
Target Start/End: Complemental strand, 41317398 - 41315252
Alignment:
| Q |
348 |
aaacctatatgtaaagataaccaatacaaattttattaggaacatcgtttctgaacttgtttgcttagacaataaatattaaaaacgacgaggaatagga |
447 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
41317398 |
aaacttatatgtaaagataaccaatacaaattttattaggaacatcgtttctgaacttgtttgcttagacaatacatattaaaaacgacgagggatagga |
41317299 |
T |
|
| Q |
448 |
attaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagt |
547 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41317298 |
attaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatccaattcttcattcttcattccattgggaagcttccaatcaaagt |
41317199 |
T |
|
| Q |
548 |
ggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtc |
647 |
Q |
| |
|
| |||||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41317198 |
gataaagtaacttagcaagaggcagctcaacattgggcaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtc |
41317099 |
T |
|
| Q |
648 |
cgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattg |
747 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41317098 |
cgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattg |
41316999 |
T |
|
| Q |
748 |
acagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctca |
847 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316998 |
acagcaacccttgtcttggctggaatctcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctca |
41316899 |
T |
|
| Q |
848 |
atgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgc |
947 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316898 |
atgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgc |
41316799 |
T |
|
| Q |
948 |
ttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatgg |
1047 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316798 |
ttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatgg |
41316699 |
T |
|
| Q |
1048 |
attaacattaacactatctactctctaaatcaacatgaattttcttccatacaacactacccaaaaattaagtcattaatttgatgttctctccaaaata |
1147 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316698 |
attaacattaacactatctactctctaaatcaacatgcattttcttccgtacaacactacccaaaaattaagtcattaatttgatgttctctccaaaata |
41316599 |
T |
|
| Q |
1148 |
ctattaactgtcaagataatcttgnnnnnnnnncctctaggaaatctgactagttttaaaattgtgaaataaacttgcttacaattttggttgtggacta |
1247 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316598 |
ctattaacagtcaagataatcttgtttttttt-cctctaggaaatctgactagttttaaaattgtgaaataaacttgcttacaattttggttgtggacta |
41316500 |
T |
|
| Q |
1248 |
acctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactagatcttcatcat |
1347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316499 |
acctggatgattgattttatattgtcatcagttaaaggatgttgtgagtgataattttcctgttgaatcttgagaagaacatctactagatcttcatcat |
41316400 |
T |
|
| Q |
1348 |
tgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtcttcgctctact |
1447 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41316399 |
tgctttcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctttgtgaagtttttccattttggtcttcgctctact |
41316300 |
T |
|
| Q |
1448 |
caagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaacacttcttgg |
1547 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41316299 |
caagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgctacttcctctattgctgatctaaacacttcttgg |
41316200 |
T |
|
| Q |
1548 |
tgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttcacttacagtta |
1647 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
41316199 |
tgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttcacttgcagtta |
41316100 |
T |
|
| Q |
1648 |
ttgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttg |
1747 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41316099 |
ttgatttaacaagatttgtcacttcatcttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttg |
41316000 |
T |
|
| Q |
1748 |
cctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatca |
1847 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41315999 |
cctccaccgttctccatatatcgagaatataacatcagtagcattgtaactccatattgtagacaaaagaaggtttggcctaccactaaagttgagatca |
41315900 |
T |
|
| Q |
1848 |
tgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatctgcca |
1947 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41315899 |
tgtgttttcataatctctttggcaatttctggtgaactaactattacgtatggcacccctcctaatttcaggtacatcaagggtccatatttatctgcca |
41315800 |
T |
|
| Q |
1948 |
aaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttgga |
2047 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||| |
|
|
| T |
41315799 |
aaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaagggtagtttccatggtcctggtggcaaattaaccgtgga |
41315700 |
T |
|
| Q |
2048 |
actgttacaactccatattttgagtattttgaataacaccaagaggaagataaagaaggaaatgaaggtgatattnnnnnnntggttgtgaagctccatg |
2147 |
Q |
| |
|
| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
41315699 |
agtgttataactccatattttgactattttgaataacaccaagaggaagataaagaaggaaatgaaggtgatattaaaaaaatggttgtgaagctc---- |
41315604 |
T |
|
| Q |
2148 |
catgagatagcttgtccctgaaggaaaaaatgaaatgactagatgatggtatatgtgcaaaagatacaacaaaaaggcttcaaggtacatcatca----- |
2242 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41315603 |
catgagatagcttgaccctgaaggaaaaaatgaaatgcctagatgatggtatatgtgcaaaagatacaacaaaaaggcttcaaggtacatcatcatattt |
41315504 |
T |
|
| Q |
2243 |
------tatttgtatcaaccaattgcgattaaaataaattattagacctttcgcttgtacttccaagccac----tatagtttaattgtggttgaaggat |
2332 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
41315503 |
tgggattatttgtatcaaccaattgcgattaaaataaattattagacctttcgcttgtacttccaaggcactatatatagtttaattgtggttgaaggat |
41315404 |
T |
|
| Q |
2333 |
caaaatatatatatgtcgttttcttttcttccaaaaagtctacgtttaaactatgttatttaaaaacaaaataattcacactcacacacatattaagcat |
2432 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
41315403 |
caaa--atatatatgtcgttttcttttcttccaaaaagtctacgttcaaactatgttatttaacaacaa---aattcacactcacacacaaattaagcat |
41315309 |
T |
|
| Q |
2433 |
agagaaatgtggaattaagagtttgaatctgcatctcatcatatcaaacatttatgc |
2489 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
41315308 |
agagaaatgtggaattaagagtttgaatctccatctcatcatatcaaacatttatgc |
41315252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 1207 - 2094
Target Start/End: Complemental strand, 41324609 - 41323722
Alignment:
| Q |
1207 |
aattgtgaaataaacttgcttacaattttggttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttc |
1306 |
Q |
| |
|
|||| |||||||||||| || ||| ||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
41324609 |
aattttgaaataaactttctaacacttttgattgttgactaacctggatgattgactttatattgtcatcggttaaaggatgttgtgagtgataattttc |
41324510 |
T |
|
| Q |
1307 |
ctgttgaatcttgagaagaacatctactagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatca |
1406 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
41324509 |
ctgttgaatcttgagaagaacatctactagatattcttcattgctatcttccttgtgaatgcttttgtgatcgtcgataatgtcttgcaatatcatatca |
41324410 |
T |
|
| Q |
1407 |
agctctctgtgaagtttttccattttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaaca |
1506 |
Q |
| |
|
| |||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
41324409 |
atctctttgtgaagtttttccattttggccttcgccctactcacgcattgaagcaatttaatagaaggatacaaatcaacaatacaaatgcctcccaaca |
41324310 |
T |
|
| Q |
1507 |
aacttgatacttcctctattgctgatctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaat |
1606 |
Q |
| |
|
||||| || |||||||| ||||||| ||||| || ||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| ||||| |
|
|
| T |
41324309 |
aacttactatttcctctactgctgatttaaacgattgctggtgtttgctccttttgccaaaagccgcccgcgttgttatcccatatgtcattgagaaaat |
41324210 |
T |
|
| Q |
1607 |
cttctgagtgagattaacaactgatccttcacttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgc |
1706 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||| ||||||||||| || ||||||| | ||||||| ||||||| | ||||||||||||||||||||| |
|
|
| T |
41324209 |
cttatgagtgagattaacaattgatccttcacttgcagttattgatgtagcaagatttgatacttcatcttctcttgtggacctaaatgattggacacgc |
41324110 |
T |
|
| Q |
1707 |
tttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattg |
1806 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||| | ||||||| |
|
|
| T |
41324109 |
tttgcacttaatagctctacaacacatatctttcgtagttgcctccaccgttctccatatttagagaatataacatcagtagcattgtaagttaatattg |
41324010 |
T |
|
| Q |
1807 |
tggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccac |
1906 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| | || |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||| | |
|
|
| T |
41324009 |
tggccaaaagaaggtttggcctatcactaaaggtaaggtcatgtgttttcataatctctttggcaatttctggtgaactaactattatgtatggtacctc |
41323910 |
T |
|
| Q |
1907 |
tcctaatttcaggtacatcaagggtccatatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatg |
2006 |
Q |
| |
|
||||| ||| |||| ||| || |||||||||||||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41323909 |
tcctagtttaaggtgcattaaaggtccatatttatcagccaaaattttgaagcggtgatggggcaatgatctgctgataatctgatgtaagtttcctatg |
41323810 |
T |
|
| Q |
2007 |
aggggtagtctccatggtcctggtggcaaattaatcttggaactgttacaactccatattttgagtattttgaataacaccaagagga |
2094 |
Q |
| |
|
||||||||| ||||||||| |||||||| || | ||||| ||||| |||||||| |||| | ||||||||||| ||| ||||||| |
|
|
| T |
41323809 |
aggggtagttcccatggtccaggtggcaatttggtagtggaattgttaaaactccatcttttaactattttgaatagcactaagagga |
41323722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 163 - 1067
Target Start/End: Complemental strand, 41325638 - 41324743
Alignment:
| Q |
163 |
ttcttcgtatgctatctattttaggtggatttcttcctcggcagtcaaggaaaagattctttcctctggttaatgtattacacaatactgtacaaatagt |
262 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41325638 |
ttcttcatatgctatcgattttaggtggatttcttccttggcagtcaaggaaaagattctt--ctctggttaatgtattacacaatactgtacaaatagt |
41325541 |
T |
|
| Q |
263 |
ttgcaactaatttctttcaacacaaattctatatttga----ggtacaaatatcataattcatacacaaattttagacgacattatagtaaacctatatg |
358 |
Q |
| |
|
| |||||| | ||||||||| |||||||||||||| || |||||||||||| |||||||||||||| |||| ||||| |||||||| | |
|
|
| T |
41325540 |
tcgcaact---tcctttcaacataaattctatatttgtttgtggaacaaatatcata-------cacaaattttagacaacat-atagtgaacctatacg |
41325452 |
T |
|
| Q |
359 |
taaagataaccaatacaaattttattaggaacatcgtttctgaacttgtttgcttagacaataaatattaaaaacgacgaggaataggaattaagcatag |
458 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |
|
|
| T |
41325451 |
taaagataaccaatacaaattttattaggaacgtcgtttctgaacttgtttgcttagacaatacatattaaagacgacgagtaataggaattaagcatag |
41325352 |
T |
|
| Q |
459 |
atcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaa |
558 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41325351 |
attgtgctttctacctgcagtaatcccaaatgactcggtcatatctagttcttcattcttcattttattgggaagcttccaatcaaagtggtaaagtaaa |
41325252 |
T |
|
| Q |
559 |
ctagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttga |
658 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||| |
|
|
| T |
41325251 |
ctagcaagaggcaattcaacgttgggtaaggcaaatgcaattccgggacacatccttcttccagcaccaaatggtatgtattcaaagtctgtgcctttga |
41325152 |
T |
|
| Q |
659 |
aatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaaccct |
758 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
41325151 |
aatcaattggactattaacaaacctctcaggtttaaaactttcagcatcaacccaataccttggatctcttccaatagcccaagcattaaccatgaccct |
41325052 |
T |
|
| Q |
759 |
tgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttg |
858 |
Q |
| |
|
|||||| |||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||| || | |||| | ||||| |||||| ||| |
|
|
| T |
41325051 |
tgtcttagctgggatttcatacccattgatttggcatctctccctactttctcttggaagtaacaacggtacggttggatgtagcctcattgtttccttg |
41324952 |
T |
|
| Q |
859 |
atgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgcttgttccatta |
958 |
Q |
| |
|
|| ||||| ||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||| ||||||||||| ||||||||||||| |||||| | |
|
|
| T |
41324951 |
atcacagattttaagtatatcaattggtgcaactctgtctcatccacaaaccccttcctatcaaaaactcttcttacctcagcttgtgcttcttccatca |
41324852 |
T |
|
| Q |
959 |
catttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatggattaacattaa |
1058 |
Q |
| |
|
| |||| || ||||||||| |||| |||||||| | ||||| | |||||||||||| ||||||||| | || ||||||| |||||||||||||||||| |
|
|
| T |
41324851 |
cctttggattctttaccatctcagatatcgcccataacacagtcgttgacgatgtttcggtaccagcatcgaatatgtcctacaaatggattaacattaa |
41324752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 318 - 1060
Target Start/End: Complemental strand, 41329468 - 41328727
Alignment:
| Q |
318 |
tcatacacaaattttagacgacattatagtaaacctatatgtaaagataaccaatacaaattttattaggaacatcgtttctgaacttgtttgcttagac |
417 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
41329468 |
tcatacacaaattttagacgacat-atagtaaacctatatgtaaagtttaccattacaaattttattaggaacattgtttttgaatttgtttgcttagat |
41329370 |
T |
|
| Q |
418 |
aataaatattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattct |
517 |
Q |
| |
|
|||| | |||||| |||||||| | |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
41329369 |
aatacacattaaagacgacgagtagtaggaattaaacataggtcgtgttttctacctacagtaatcccaaaaaactcagtcatatcaagttcttgatggc |
41329270 |
T |
|
| Q |
518 |
tcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctcct |
617 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||| |||||||| |||||||||||||||||| || |
|
|
| T |
41329269 |
tcattccattgggaagcttccaatcaaagtgataaagtaacttagcaagaggcagctcaacattgggtatggcaaatgaaatacctggacacatccttct |
41329170 |
T |
|
| Q |
618 |
tccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaatac |
717 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41329169 |
tccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattggactattaacaaacctctcaggtttaaaactctcagcttcaacccaatac |
41329070 |
T |
|
| Q |
718 |
cttggatctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaa |
817 |
Q |
| |
|
|||| |||||||||||||||||||||||| || ||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41329069 |
cttgaatctcttccaatagcccaagcattaaccattacccttgtcttagctgggatttcatacccattgatttggcatctctccctactttctcttggaa |
41328970 |
T |
|
| Q |
818 |
ctaacaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatcccttttt |
917 |
Q |
| |
|
|||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
41328969 |
ctaacaatggtgcaacgggatgcaacctcaatgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcatccacatactccttttt |
41328870 |
T |
|
| Q |
918 |
atcaaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttca |
1017 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| ||||||||| |||| ||| || |||||| ||||||||||||| | || | ||| |||||||||||| |
|
|
| T |
41328869 |
atcaaacactctacttacttcatcttgtgcttcttccattacctttgggttcttcaccatctcagacatcgcccataacagaacctgtgacgatgtttcg |
41328770 |
T |
|
| Q |
1018 |
gtaccagcaccaaacatgtcctgcaaatggattaacattaaca |
1060 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
41328769 |
gtaccagcaaggaacatgtcctacaaatggattaacattaaca |
41328727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 1196 - 2082
Target Start/End: Complemental strand, 41332531 - 41331645
Alignment:
| Q |
1196 |
actagttttaaaattgtgaaataaacttgcttacaattttggttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgag |
1295 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
41332531 |
actagtttttaaattgtgaaataaacttgctaccacttttggttttagactaacctggatgattgatttcatattgtcatcggttaaaggatgttctgag |
41332432 |
T |
|
| Q |
1296 |
tgataattttcctgttgaatcttgagaagaacatctactagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgca |
1395 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
41332431 |
taataattttcctgttgaatcttgagaagaacatctactagatcttcatcgttgcttgcttccttgtgaatgcttctgtgatcgtcgatgatgtcttgca |
41332332 |
T |
|
| Q |
1396 |
atgtcatatcaagctctctgtgaagtttttccattttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaac |
1495 |
Q |
| |
|
| |||||||||||||||| |||| ||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||| ||||||| |||| || |
|
|
| T |
41332331 |
ttatcatatcaagctctctatgaattttttccattttggtcttctccctactcatgcattgaagcattttaatagaaggatacaaatctgcaatttcaaa |
41332232 |
T |
|
| Q |
1496 |
gcctcccaacaaacttgatacttcctctattgctgatctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtc |
1595 |
Q |
| |
|
||||| || | |||||| ||| ||||||||| | ||||| ||||||| | | |||||||||||||||| || |||||||||||||||| |||| |
|
|
| T |
41332231 |
tcctcctaatagcaccaatactttctccattgctgatatgaacacatcttggtttctattccttttcccaaaagctgcccgcgctgttatcccatttgtc |
41332132 |
T |
|
| Q |
1596 |
gttgacaaaatcttctgagtgagattaacaactgatccttcacttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatg |
1695 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
41332131 |
attgagaaaatcttccgagtgagatttacaaccgatccttcacttgcagttattgatttaacaagatttgtcacttcatcttctcttatggacctaaatg |
41332032 |
T |
|
| Q |
1696 |
attggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgta |
1795 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| | ||| | | ||| | || || ||||||| ||| |
|
|
| T |
41332031 |
attggacacgctttgcacttaatagctctataacacatatctttcgtacttgcctccaatgttcacagtatgtagcgaagacaatatttgtagcattgta |
41331932 |
T |
|
| Q |
1796 |
actaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacg |
1895 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||| ||| ||| | || |||||||||||||| | |||||| || ||||||||||||||||||||||| |
|
|
| T |
41331931 |
actccatattgttgacaaaagaaggtttggcctatcacaaaatgtaaggtcatgtgttttcataacctcttttgccatttctggtgaactaactattaca |
41331832 |
T |
|
| Q |
1896 |
tatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgta |
1995 |
Q |
| |
|
||||| ||| |||||| ||| |||| |||||| ||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
41331831 |
tatggtacctctcctagtttaaggtgcatcaaaggtccatatttttctgccaactttttgaagaggtgatggggcaatgatctgctgataatctgatgta |
41331732 |
T |
|
| Q |
1996 |
agtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttggaactgttacaactccatattttgagtattttgaata |
2082 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| || | ||||| ||||| |||||||| ||| | ||||||||||| |
|
|
| T |
41331731 |
agtttcctatgaggggtagtttccatggtcctggtggcaatttggtagtggaattgttaaaactccatctttgaactattttgaata |
41331645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1196 - 2122
Target Start/End: Complemental strand, 41328517 - 41327592
Alignment:
| Q |
1196 |
actagttttaaaattgtgaaataaacttgcttacaattttggttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgag |
1295 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| ||| |||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
41328517 |
actagtttttaaattgtgaaataaacttgctaacactttcggtt-tagactaacctggatgattgatttcatattgtcatcggttaaaggatgttctgag |
41328419 |
T |
|
| Q |
1296 |
tgataattttcctgttgaatcttgagaagaacatctactagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgca |
1395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
41328418 |
tgataattttcctgttgaatcttgagaagaacatctactagatcttcatcattgcttgcttccttgtgaatacttctgtgatcgtcgatgatgtcttgtg |
41328319 |
T |
|
| Q |
1396 |
atgtcatatcaagctctctgtgaagtttttccattttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaac |
1495 |
Q |
| |
|
| ||||||||| |||| | |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||||||| ||||||| |||| || |
|
|
| T |
41328318 |
ctatcatatcaatctctgtatgaagtttttccattttggtcttctccctagtcatccattgaagcaatttaatagaaggatacaaatctgcaatttcaaa |
41328219 |
T |
|
| Q |
1496 |
gcctcccaacaaacttgatacttcctctattgctgatctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtc |
1595 |
Q |
| |
|
| ||| || | ||||| ||| | ||||| | | ||||| ||||||||| | |||||||||||||||| || |||||||||||||||| |||| |
|
|
| T |
41328218 |
tcttcctaatagcaccactactttctccaatgctggtatgaacacatcttggtgtctattccttttcccaaaagctgcccgcgctgttatcccatttgtc |
41328119 |
T |
|
| Q |
1596 |
gttgacaaaatcttctgagtgagattaacaactgatccttcacttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatg |
1695 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||| |||| ||||||||| |||||||||| |
|
|
| T |
41328118 |
attgagaaaatcttccgagtgagattaacaactgatccttcacttgcagttattgatttaacaaggtttgacacctcatcttctcttatggacctaaatg |
41328019 |
T |
|
| Q |
1696 |
attggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgta |
1795 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| || ||| | ||| || || ||||||| ||| |
|
|
| T |
41328018 |
attgtacacgctttgcacttaatagctctataacacatatctttcgtaattgcctccaatgttcaccgtatgcagcgaaggcaatgtctgtagcattgta |
41327919 |
T |
|
| Q |
1796 |
actaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacg |
1895 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
41327918 |
actatatatattggacaaaagaaggtttggcctgtcgcagaagttgagatcatgtgttttcataatctctttggcaatttctggtgaactaactattacg |
41327819 |
T |
|
| Q |
1896 |
tatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgta |
1995 |
Q |
| |
|
||||| ||| |||||| ||| |||| ||| | |||||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||||||| |
|
|
| T |
41327818 |
tatggtacctctcctagtttaaggtgcattagaggtccatatttatctgccaaaattttgaagagatgatggggcaatgatctgctgataatctgatgta |
41327719 |
T |
|
| Q |
1996 |
agtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttggaactgttacaactccatattttgagtattttgaataacaccaagaggaa |
2095 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| || | | ||| ||||| |||||||| ||| | ||||||||||| || ||||||| |
|
|
| T |
41327718 |
agtttcctatgaggggtagtttccatggtcctggtggcaatttggtagtcgaattgttaaaactccatctttgaactattttgaatagaactaagaggat |
41327619 |
T |
|
| Q |
2096 |
gataaagaaggaaatgaaggtgatatt |
2122 |
Q |
| |
|
|| |||| || ||||||| ||||||| |
|
|
| T |
41327618 |
gagaaaggagagaatgaagatgatatt |
41327592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 375 - 1060
Target Start/End: Complemental strand, 41333344 - 41332660
Alignment:
| Q |
375 |
aaattttattaggaacatcgtttctgaacttgtttgcttagacaataaatattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacct |
474 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||| |||||||| |||||||||||| ||||||||||| ||||| ||| |
|
|
| T |
41333344 |
aaattttataaggaacatcgtt-ctgaacttgtttgcttagaaaatacatattaaagacgacgagtaataggaattaaacatagatcgtgctttcttcct |
41333246 |
T |
|
| Q |
475 |
gcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaact |
574 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| | || |
|
|
| T |
41333245 |
acagtaatcccaaatgactcggtcatatctagttcttcattcttcattttattgggaagcttccaatcaaagtggcaaagtaattgagcaagaggtagct |
41333146 |
T |
|
| Q |
575 |
caatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctatt |
674 |
Q |
| |
|
|||| || |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
41333145 |
caatgtttggtagggcaaatgcaattccgggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaattcaattgtgctatt |
41333046 |
T |
|
| Q |
675 |
aacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatc |
774 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||| |||| || |
|
|
| T |
41333045 |
aacaaacctctcaggtttaaaactctcagcttcaacccaataccttgaatctcttccaatagcccaagcattaaccattacccttgtcttagctgggatt |
41332946 |
T |
|
| Q |
775 |
tcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagt |
874 |
Q |
| |
|
||||| ||||| ||||||||| || | ||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
41332945 |
tcatacccattaatttggcatggcttcatactttctcttggaattaacaatggtgcaacgggatgtaacctcaatgtttctttgacgacagactttaagt |
41332846 |
T |
|
| Q |
875 |
atatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttac |
974 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||| |||| ||| ||||| |
|
|
| T |
41332845 |
atatcaattggtgcaactctgactcatccacatacccctttttatcaaacactcttcttacttcaatctgtgcttcttccaatacctttgggttctttac |
41332746 |
T |
|
| Q |
975 |
catcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatggattaacattaaca |
1060 |
Q |
| |
|
|||| ||||||||||||| | || |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
41332745 |
catctcagacatcgcccataacaatacctctgacgatgtttcggtaccagcaatgaacatatcctacaaatggattaacattaaca |
41332660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 1536 - 2122
Target Start/End: Complemental strand, 41322262 - 41321675
Alignment:
| Q |
1536 |
aacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatcctt |
1635 |
Q |
| |
|
||||| ||||||||| | |||||||||||||| |||| | ||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
41322262 |
aacacatcttggtgtctattccttttcccaaaaaccgccctcgctgttatcccatatgtcattgagaaaatcttctcactgagattaacaactgatcctt |
41322163 |
T |
|
| Q |
1636 |
cacttaca-gttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacata |
1734 |
Q |
| |
|
|||||| | |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| |
|
|
| T |
41322162 |
cacttaaaagttattgatttaacaagatttgtcacttcatcttctcttatagacctaaatgattggatgcgctttgcacttaatagttctataacgcata |
41322063 |
T |
|
| Q |
1735 |
tctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccact |
1834 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
41322062 |
tctttcgtagttccctccaccattctcgatacatcgaaaatataacatcagtagcattgtaactaaatattgtagacaaaagaaggtttggcctatcaca |
41321963 |
T |
|
| Q |
1835 |
aaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtcca |
1934 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||| | |||||| |
|
|
| T |
41321962 |
aaagttgagatcatgtgttttcataatctctttggcaatttctggtgaactaactattacgtatggtacctctcctagtttaaggtgcattagaggtcca |
41321863 |
T |
|
| Q |
1935 |
tatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggca |
2034 |
Q |
| |
|
|||||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
41321862 |
tatttatctgccaaaattttgaagagatgatggggcaatgatctgctgataatctgatgtaagtttcctatgaagggtagtttccatggtcctggtggca |
41321763 |
T |
|
| Q |
2035 |
aattaatcttggaactgttacaactccatattttgagtattttgaataacaccaagaggaagataaagaaggaaatgaaggtgatatt |
2122 |
Q |
| |
|
|||||| | ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
41321762 |
aattaaccgtggaagtgttataactccatattttgactattttgaataacaccaagaggaagataatgaaggaaatgaaggtaatatt |
41321675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 282 - 978
Target Start/End: Complemental strand, 41311660 - 41310969
Alignment:
| Q |
282 |
acacaaattctatatttgaggtacaaatatcataattcatacacaaattttagacgacattatagtaaacctatatgtaaagataaccaatacaaatttt |
381 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||| | |||| |||||||||| |
|
|
| T |
41311660 |
acacatattctatatttgtggtacaaatatcata-------cataaattttagacgacat-atagtaaacctatatgtaaagtttaccactacaaatttt |
41311569 |
T |
|
| Q |
382 |
attaggaacatcgtttctgaacttgtttgcttagacaataaatattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaa |
481 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||| | | ||||| ||||| |||||| |||| ||||||||||||||| |||||| |
|
|
| T |
41311568 |
attaggaacatcgtttctgaacttgtttgcttagataatacatattacaga-gacgattaatagcaattaaatataggtcgtgttttctacctacagtaa |
41311470 |
T |
|
| Q |
482 |
tcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatatt |
581 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| | |||||| || |
|
|
| T |
41311469 |
tcccaaatgactcagccatatctagttcttcattcttcattttattgggaagcttccaatcaaaccggtaaagtaattgagcaagaggtagctcaatgtt |
41311370 |
T |
|
| Q |
582 |
gggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaac |
681 |
Q |
| |
|
|||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
41311369 |
tggtagggcaaatgcaattccgggacacatcctccttccagcaccaaatggtatgtattcaaagtccgtgcctttgaattcaattgtgctattaacaaac |
41311270 |
T |
|
| Q |
682 |
ctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataac |
781 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | | | | || |||||||| | ||| ||||||| | |
|
|
| T |
41311269 |
ctctcaggtttaaatctctcagcttcaacccaataccttggatctcttccaatagcccaagcaataataacgactcttgtcttaattgggatctcatgcc |
41311170 |
T |
|
| Q |
782 |
cattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaa |
881 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
41311169 |
tattaatttggcatctctccctactttctcttggaactaacaatggtgcaactggatgcaacctcagtgtttctttgatgacaaactttaagtatatcaa |
41311070 |
T |
|
| Q |
882 |
ttggtacaactctgtctcatccacatat----ccctttttatcaaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccat |
977 |
Q |
| |
|
||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| ||| |||||||| |
|
|
| T |
41311069 |
caggtgcaactccatctcatccacatatatacccctttttatcaaacactcttcttacttcaacttgtgcttcttccattacctttgggttctttaccat |
41310970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1233 - 2102
Target Start/End: Original strand, 31188377 - 31189246
Alignment:
| Q |
1233 |
tttggttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatcta |
1332 |
Q |
| |
|
||||||||| ||| |||| | ||||||| ||| ||||||| ||||||||| |||| | |||||||| ||||||||||||||||||||||||| ||| | |
|
|
| T |
31188377 |
tttggttgtagacgaaccagaatgattgctttcatattgttatcagttaatggattatgtgagtgatcattttcctgttgaatcttgagaagagtatcaa |
31188476 |
T |
|
| Q |
1333 |
ctagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccatttt |
1432 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||| |||| ||||| ||||||| ||||||||| ||||||||| |||| | ||||| ||||| | ||| |
|
|
| T |
31188477 |
ctagatcttcatccttgctttcttccttgtgaatgtttttatgatcaacgatgatatcttgcaatatcatatcaatctctttatgaagcttttcaacttt |
31188576 |
T |
|
| Q |
1433 |
ggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgat |
1532 |
Q |
| |
|
|||||||| ||||||| ||||||| || ||||| ||||||| ||| ||| ||||||||| |||||| |||||| | || |||| |||||||||| |
|
|
| T |
31188577 |
cgtcttcgccctactcacccattgaaacattttaacagaaggatacacatcagcaatacaaaattctcccagcaaactagctatctcctttattgctgat |
31188676 |
T |
|
| Q |
1533 |
ctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatc |
1632 |
Q |
| |
|
| || ||||||||||||| |||||||||||||| || ||||| | |||||||| ||||| || | |||||||| ||| |||||||||||| ||||| |
|
|
| T |
31188677 |
ttgaaagcttcttggtgtttactccttttcccaaacgctgctcgtgtcgttatccctgatgtcattaaaaaaatcttatgactgagattaacaattgatc |
31188776 |
T |
|
| Q |
1633 |
cttcacttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacaca |
1732 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| | ||| || | |||||||||| ||||||| ||||||||||||||||| ||||||| || || |||||| |
|
|
| T |
31188777 |
cttcacttgcagatattgatttaacaagatttgacacctcttcttctcttatatacctaaacgattggacacgctttgcacttaataattgtaaaacaca |
31188876 |
T |
|
| Q |
1733 |
tatctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctacca |
1832 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||| |||| |||| |||||| ||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
31188877 |
tatctttcgtagttgcctccagtgttctccatatggagagaagataatatcaatagcattgtaactaaatattgtggacaaaagaaggtttggtctatca |
31188976 |
T |
|
| Q |
1833 |
ctaaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtc |
1932 |
Q |
| |
|
| ||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||| |||| ||| ||||||| |
|
|
| T |
31188977 |
caaaagttgaggtcatgtgttttcataatctctttggccattgatggtgaactaactattaggtatgatacctctcctagttttaggtgcattaagggtc |
31189076 |
T |
|
| Q |
1933 |
catatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtgg |
2032 |
Q |
| |
|
||||| |||| || ||| ||| || | ||||| |||||||| |||| |||| ||||| | ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
31189077 |
catatgtatcagctaaatttttgaagcattgatgaggcaatgagttgctaataagttgatgcatgtttcctatgatgggtagtgtccatggtcctggtgg |
31189176 |
T |
|
| Q |
2033 |
caaattaatcttggaactgttacaactccatattttgagtattttgaataacaccaagaggaagataaag |
2102 |
Q |
| |
|
||||| || ||||| |||||||||||||| |||| | |||||||| || ||| ||||| |||| |||| |
|
|
| T |
31189177 |
taaattgatactggaattgttacaactccattttttaactattttgagtagcacaaagagaaagagaaag |
31189246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 423 - 1060
Target Start/End: Original strand, 31187576 - 31188213
Alignment:
| Q |
423 |
atattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcatt |
522 |
Q |
| |
|
||||||| |||||||| ||||||||| |||||||| || |||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
31187576 |
atattaaggacgacgagtaataggaatcaagcataggtcatgttttcttcctatagccatcccaaatgactcagtcatatctagttcttcattcttcatt |
31187675 |
T |
|
| Q |
523 |
ccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccag |
622 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||| ||||||| || ||||||||||| || ||||||| |
|
|
| T |
31187676 |
ccattaggaagcttccaatcaaagtggtaaagtaactgagcaagaggcagctcaatgttggataagccaaatgccatgcctggacacattcttcttccag |
31187775 |
T |
|
| Q |
623 |
caccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttgg |
722 |
Q |
| |
|
|||| || |||||| |||| || | ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31187776 |
caccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattgagaaacctctcaggtttaaaactctcagcttctgcccaatacctttc |
31187875 |
T |
|
| Q |
723 |
atctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaac |
822 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||| ||||| || |||| || ||||| |||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
31187876 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaaccaac |
31187975 |
T |
|
| Q |
823 |
aatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaa |
922 |
Q |
| |
|
|| || || ||||| | ||||||||||||| |||| | ||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
31187976 |
aaaggcacagaaggatgtagcctcaatgtttctctgattatagactttaagtatatcaattggtgcaactctgtttcatcgacatacccctttttatcaa |
31188075 |
T |
|
| Q |
923 |
acactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtacc |
1022 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| |||| ||| ||||||||| |||| ||| |||| | ||||||| | ||||||||||| ||||| |
|
|
| T |
31188076 |
acacttttcttacttcagcttgtgctttctccattatctttgggttctttaccatctcagatatcccccatagcacagccccggacgatgtttccgtacc |
31188175 |
T |
|
| Q |
1023 |
agcaccaaacatgtcctgcaaatggattaacattaaca |
1060 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||| |||| |
|
|
| T |
31188176 |
agcaccaaacatatcctacaaatggattagcatcaaca |
31188213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 291; E-Value: 1e-162
Query Start/End: Original strand, 441 - 1055
Target Start/End: Complemental strand, 41287471 - 41286858
Alignment:
| Q |
441 |
aataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaa |
540 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
41287471 |
aataggaattaatcataggtcatgttttcttcctacagtaatcccaaatgactcagtcatatcaagttcttcacacttcattccattgagaagcttccaa |
41287372 |
T |
|
| Q |
541 |
tcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaatt |
640 |
Q |
| |
|
|||||||| |||||||| ||||||||| | ||||| ||||||| | | || ||||| ||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
41287371 |
tcaaagtgataaagtaattcagcaagaggaagctcaacgttgggtatgccgaaggcaatgcctgggcacatcctccttccagcaccaaatggtatgtatt |
41287272 |
T |
|
| Q |
641 |
cgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagccca |
740 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||| |||||||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
41287271 |
cgaagtctgtgccattgaaatcaattggactattaacaaacctctcgggtttgaaattctcagcttcgacccaatatcttggatctcttccaattgccca |
41287172 |
T |
|
| Q |
741 |
agcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatac |
840 |
Q |
| |
|
|||||||||| |||||| |||||| | || || ||||| ||||| ||||||||| || | ||||||||||||||| |||||||| | |||||| | |
|
|
| T |
41287171 |
agcattgacaagaaccctagtcttggccgggatatcatatccattaatttggcatggcttcatactttctcttggaatcaacaatggtatagcaggatgc |
41287072 |
T |
|
| Q |
841 |
aacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcag |
940 |
Q |
| |
|
||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
41287071 |
aacctcattgtttctttgataacagacttcaagtatatcaattggtgcaactctgtctcaaccacatacccctttctatcaaacactcttcttacctcag |
41286972 |
T |
|
| Q |
941 |
cttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctg |
1040 |
Q |
| |
|
||||||||| |||||| || |||| || ||||||||| |||||||| | || | ||||||| ||||||||||||| ||||||| |||| |||||| |
|
|
| T |
41286971 |
cttgtgctt-ttccatcacctttggattctttaccatctcagacatccctcataacacagcccctgacgatgtttcgccaccagcagtgaacaagtcctg |
41286873 |
T |
|
| Q |
1041 |
caaatggattaacat |
1055 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
41286872 |
taaatggattaacat |
41286858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 284; E-Value: 1e-158
Query Start/End: Original strand, 484 - 1047
Target Start/End: Complemental strand, 41338043 - 41337480
Alignment:
| Q |
484 |
ccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgg |
583 |
Q |
| |
|
|||||||| ||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||||| || |||||||||||| ||||| ||||| |
|
|
| T |
41338043 |
ccaaatgattcagtcatatcaagttcttgatggctcattccatttggaagtttccaatcaaagtgataaagcaacttagcaagaggcagctcaacattgg |
41337944 |
T |
|
| Q |
584 |
gtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacct |
683 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41337943 |
gcaaggcaaatgcaatacctggacacatccttcttccagcaccaaatggtattaattcaaagtctgtgcctttgaaatcaattgagctattaacaaacct |
41337844 |
T |
|
| Q |
684 |
ctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataacca |
783 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
41337843 |
ctcaggtttaaaactctcagcttcaacccaatactttggatctcttccaattgcccaaacattgacagcaacccttgtcttagctgggatctcataccca |
41337744 |
T |
|
| Q |
784 |
ttgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaatt |
883 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||| || || ||||| | ||| |||||||||||||||||| ||||||||||| |||| | |
|
|
| T |
41337743 |
ttgatttcacatctctctctactttctcttggaaccaacaaaggtacagtaggatgtagcctaaatgtttctttgatgacacactttaagtatgtcaact |
41337644 |
T |
|
| Q |
884 |
ggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcaga |
983 |
Q |
| |
|
| | |||||||||||| || ||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||| ||| |||| |||| | || |
|
|
| T |
41337643 |
gttgcaactctgtctcgtctacatacccctttttatcaaacactcttcttacctcaacttgtgcttcttccattactattgggttctttatcatctccga |
41337544 |
T |
|
| Q |
984 |
catcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatgg |
1047 |
Q |
| |
|
||||||||| | |||| ||||||||||||| | |||||| |||| ||||||||||||| |
|
|
| T |
41337543 |
catcgcccatagcacaattcctgacgatgtttcgctgccagcaatgaacaagtcctgcaaatgg |
41337480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 281; E-Value: 1e-156
Query Start/End: Original strand, 423 - 1103
Target Start/End: Original strand, 31177513 - 31178193
Alignment:
| Q |
423 |
atattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcatt |
522 |
Q |
| |
|
|||||||| |||||||| |||||||| |||||||| || |||||||| || ||| || ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
31177513 |
atattaaagacgacgagttataggaatcaagcataggtcatgttttcttactacagcaagcccaaatgactcagtcatatctagttcttcattcttcatt |
31177612 |
T |
|
| Q |
523 |
ccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccag |
622 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||| ||||||| || ||||||||||| || ||||||| |
|
|
| T |
31177613 |
ccattaggaagcttccaatcaaagtggtaaagtaactgagcaagaggcagctcaatgttggataagccaaatgccatgcctggacacattcttcttccag |
31177712 |
T |
|
| Q |
623 |
caccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttgg |
722 |
Q |
| |
|
|||| || |||||| | || |||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
31177713 |
caccgaacggtatgtactcaaagtttgtacctttgaaatcaattgtgctattaacaaacctctcgggtttaaaactctcagcttctgcccaatacctttc |
31177812 |
T |
|
| Q |
723 |
atctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaac |
822 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||| ||||| || |||| || ||||| |||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
31177813 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaatcaac |
31177912 |
T |
|
| Q |
823 |
aatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaa |
922 |
Q |
| |
|
|| || | ||||| |||||| |||||||||||||| | |||||||||||||||||| |||| ||||||||| ||||| |||| ||||||||||||| |
|
|
| T |
31177913 |
aaaggtaaagaaggatgcaaccttaatgtttctttgattatagactttaagtatatcaaatggtgcaactctgtttcatcgacatgcccctttttatcaa |
31178012 |
T |
|
| Q |
923 |
acactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtacc |
1022 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||| |||| ||| |||| |||| |||| ||| |||| | |||| | |||| |||||||| ||||| |
|
|
| T |
31178013 |
acacttttcttacttcagcttgtgcttccttcattatctttgggttctttatcatctcagatatcccccataacacaactcctgatgatgtttcggtacc |
31178112 |
T |
|
| Q |
1023 |
agcaccaaacatgtcctgcaaatggattaacattaacactatctactctctaaatcaacatgaattttcttccatacaaca |
1103 |
Q |
| |
|
| || ||||||| |||| ||||||||||| |||||||| |||||| | | |||| ||||||| ||||| || |||||||| |
|
|
| T |
31178113 |
accaacaaacatatcctacaaatggattagcattaacattatctagtatataaaccaacatgcatttttatctatacaaca |
31178193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 266; E-Value: 1e-147
Query Start/End: Original strand, 1254 - 2102
Target Start/End: Complemental strand, 31225415 - 31224564
Alignment:
| Q |
1254 |
atgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactagatcttcatcattgcttg |
1353 |
Q |
| |
|
||||||| ||| ||||||| ||||||||| |||| |||||| | |||||||||||| |||||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
31225415 |
atgattgctttcatattgttatcagttaatggattaagtgagtgctcattttcctgttgtatcttgagaagagtatcaactagatcttcatccttgcttt |
31225316 |
T |
|
| Q |
1354 |
cttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtcttcgctctactcaagca |
1453 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||||| ||||||||| ||||||||| |||| | ||||| ||||| | |||||||||||| ||||||| || |
|
|
| T |
31225315 |
cttccttgtgaatgtttttatgatcatcgatgatatcttgcaatatcatatcaatctctttatgaagcttttcaactttggtcttcgccctactcaccca |
31225216 |
T |
|
| Q |
1454 |
ttgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaacacttcttggtgtttg |
1553 |
Q |
| |
|
|||||||| ||| ||||||||| ||| ||| |||||||||| ||||||| |||||| | || |||| || ||||||||| ||||||| || || || |
|
|
| T |
31225215 |
ttgaagcatttttatagaaggatacacatcaacaatacaaaatcctcccatcaaactagttatctcctttagtgctgatctgaacacttgatgctgctta |
31225116 |
T |
|
| Q |
1554 |
ctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttcacttacagttattgatt |
1653 |
Q |
| |
|
||||||||||||| || || | | |||||||| ||||| ||| ||||||| ||| | |||||||||| ||||||||||||| ||| |||||||| |
|
|
| T |
31225115 |
ttccttttcccaaacgctgcctgtgtcgttatccccgatgtcattgcataaatcttatgactcagattaacaattgatccttcacttgcagatattgatt |
31225016 |
T |
|
| Q |
1654 |
taacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctcca |
1753 |
Q |
| |
|
||||||||| | ||| || | |||||||||| ||||||||||||||||||||||||| ||||||| || || ||||||||||||||||| ||||||||| |
|
|
| T |
31225015 |
caacaagatttgacacctcttcttctcttatatacctaaatgattggacacgctttgcacttaataattgtaaaacacatatctttcgtatttgcctcca |
31224916 |
T |
|
| Q |
1754 |
ccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgtt |
1853 |
Q |
| |
|
||||||||||| ||||| | || | |||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||| || | |||| |
|
|
| T |
31224915 |
gtgttctccatatgcagagaaaacaatactagtagcattgtaactaaatattgtggacaaaagaaggtttgctctgtcacaaaagttgaggtcgtttgtt |
31224816 |
T |
|
| Q |
1854 |
ttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaatt |
1953 |
Q |
| |
|
||||| ||||||| ||| ||| ||||||||||||||||| ||||| ||| |||||| ||| | || ||| |||||||||||||| || |||||| || |
|
|
| T |
31224815 |
ttcataatctcttgggccattgatggtgaactaactattaggtatgatacctctcctagttttaagtgcattaagggtccatatttttcagccaaatttt |
31224716 |
T |
|
| Q |
1954 |
taaaacggtgatggggcaa---tgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttggaact |
2050 |
Q |
| |
|
| || ||||| ||||| ||| |||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||| || |||||| | |
|
|
| T |
31224715 |
ttaagtactgatgaggcaatattgagttgctaataatttgatgtaagtttcctatgatgggtagtgtccatggtcctggtggtaaattgatattggaatt |
31224616 |
T |
|
| Q |
2051 |
gttacaactccatattttgagtattttgaataacaccaagaggaagataaag |
2102 |
Q |
| |
|
||||||||||||| |||| | || ||||| || ||||||||| |||| |||| |
|
|
| T |
31224615 |
gttacaactccattttttaactaatttgagtagcaccaagagaaagagaaag |
31224564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 423 - 1060
Target Start/End: Complemental strand, 31226202 - 31225565
Alignment:
| Q |
423 |
atattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcatt |
522 |
Q |
| |
|
||||||| |||||||| |||||||| ||||| || || | |||||| ||| ||| || ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
31226202 |
atattaaggacgacgagtgataggaatcaagcacaggtcattttttcttcctacagaaagcccaaatgactcagtcatatctagttcttcattcttcatt |
31226103 |
T |
|
| Q |
523 |
ccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccag |
622 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||| ||||||| || ||||||||||| || ||||||| |
|
|
| T |
31226102 |
ccattaggaagcttccaatcaaagtggtaaagtaactgagcaagaggcagctcaatgttggataagccaaatgccatgcctggacacattcttcttccag |
31226003 |
T |
|
| Q |
623 |
caccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttgg |
722 |
Q |
| |
|
|||| || |||||| |||| || | ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31226002 |
caccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattgagaaacctctcaggtttaaaactctcagcttctgcccaatacctttc |
31225903 |
T |
|
| Q |
723 |
atctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaac |
822 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||| ||||| || |||| || ||||| |||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
31225902 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaaccaac |
31225803 |
T |
|
| Q |
823 |
aatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaa |
922 |
Q |
| |
|
|| || ||| |||| || |||||||||||| | || | ||||||||||||||| ||||||| ||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
31225802 |
aaaggtgcagatggatgtaatctcaatgtttctctaattatagactttaagtatattaattggtgcaactctgtttcatcgacatgtccctttttatcaa |
31225703 |
T |
|
| Q |
923 |
acactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtacc |
1022 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||| ||| ||||||||| |||| ||| |||| | |||| || |||| || ||||| |||| |
|
|
| T |
31225702 |
acatgtttcttacttcagcttgtgcttcctccattatctttgggttctttaccatctcagatatcccccataacacaacccctgatgacgtttcgctacc |
31225603 |
T |
|
| Q |
1023 |
agcaccaaacatgtcctgcaaatggattaacattaaca |
1060 |
Q |
| |
|
|||| ||||||| |||| ||||||||||| ||| |||| |
|
|
| T |
31225602 |
agcagcaaacatatcctacaaatggattagcatcaaca |
31225565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 444 - 1053
Target Start/End: Complemental strand, 41367455 - 41366846
Alignment:
| Q |
444 |
aggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatca |
543 |
Q |
| |
|
|||||| ||||||| || |||||||| ||| | | || |||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41367455 |
aggaatcaagcataagtcatgttttcttcctactgcaagcccaaatgactccgtcatatctaattcttcattcttcattccatttggaagcttccaatca |
41367356 |
T |
|
| Q |
544 |
aagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcga |
643 |
Q |
| |
|
|| ||||||||||| ||| | ||| | ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
41367355 |
aaatggtaaagtaactgagctaaaggtagctctatgttgggtaaggcaaatgcaatacccagacacatcctccttccagcaccaaatggtatgtattcaa |
41367256 |
T |
|
| Q |
644 |
agtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagc |
743 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| ||| |||||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41367255 |
agtctgtgcctttgaaatcaattcggctattaagaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagc |
41367156 |
T |
|
| Q |
744 |
attgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaac |
843 |
Q |
| |
|
||| ||| ||||||||||| |||| || ||||| | ||| ||||||||| || | ||||||||||||||| || ||||| | ||||| |||| |
|
|
| T |
41367155 |
attaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaac |
41367056 |
T |
|
| Q |
844 |
ctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagctt |
943 |
Q |
| |
|
|||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
41367055 |
ctcattgtttctttgatgacggattttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaaacactcttcttacctcaactt |
41366956 |
T |
|
| Q |
944 |
gtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaa |
1043 |
Q |
| |
|
||||| ||||||||| | | || ||||||||| ||||||||| ||| | |||||| || || |||| || ||| ||| || |||||||||||||||| |
|
|
| T |
41366955 |
gtgctgcttccattaccatcggattctttaccatctcagacatcgtccataacacagcttcagaagatgattgagtgccaccaacaaacatgtcctgcaa |
41366856 |
T |
|
| Q |
1044 |
atggattaac |
1053 |
Q |
| |
|
|||||||||| |
|
|
| T |
41366855 |
atggattaac |
41366846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1238 - 2122
Target Start/End: Complemental strand, 41366666 - 41365785
Alignment:
| Q |
1238 |
ttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactaga |
1337 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||| || || || ||||||| |||||||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
41366666 |
ttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactaga |
41366570 |
T |
|
| Q |
1338 |
tcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtct |
1437 |
Q |
| |
|
|| |||| || || |||| ||||||| | ||||||||||| |||||||| ||||||||| |||||||| |||||| ||||||||||| | ||| || |
|
|
| T |
41366569 |
tcatcattcttcctagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttcc |
41366470 |
T |
|
| Q |
1438 |
tcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaa |
1537 |
Q |
| |
|
| | | ||| || |||||| | ||||||||||||| ||||||| ||| | ||| |||||||| | | ||| ||||| ||||||||| |||| |
|
|
| T |
41366469 |
ttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaa |
41366370 |
T |
|
| Q |
1538 |
cacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttca |
1637 |
Q |
| |
|
||||||||||||||| || |||| ||||| || || |||||||| |||||| ||| ||| | |||| | ||||||||||||||||| ||||||||| |
|
|
| T |
41366369 |
cacttcttggtgtttattcttttttccaaatgctgcccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaaccgatccttca |
41366270 |
T |
|
| Q |
1638 |
cttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatct |
1737 |
Q |
| |
|
||| |||||||||||||||||||||| | ||| || | |||||| || ||||||||||||| |||||| ||||| |||||||| ||| ||||||||| | |
|
|
| T |
41366269 |
cttgcagttattgatttaacaagatttgacacctcttcttctctaatggacctaaatgattcgacacgttttgcacttaatagctcttcaacacatattt |
41366170 |
T |
|
| Q |
1738 |
ttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaa |
1837 |
Q |
| |
|
|||||| ||||||||| |||||||| | | ||||| || ||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||| || |
|
|
| T |
41366169 |
ttcgtaattgcctccaattttctccatgtgtagagaaggcaatatcagtagcattgtaactaaatattgtagacaaaagaagttttggcctatcacagaa |
41366070 |
T |
|
| Q |
1838 |
gttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatat |
1937 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||| | ||||| || |||| ||| |||||||||||| |
|
|
| T |
41366069 |
gttgatatcatgtgttttcataatctctttggcaatttctggtgaactaactattatgtaaggtacctcacctaactttaggtgcattaagggtccatat |
41365970 |
T |
|
| Q |
1938 |
ttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaat |
2037 |
Q |
| |
|
| |||||||| ||| | |||||||||||||||| || | ||||||||||||| ||||||||||||||| | | |||||||||| ||||| |||| |
|
|
| T |
41365969 |
tcctctgccaattttttgaggtggtgatggggcaatgaactcgttataatctgatgtatgtttcctatgaggggcattgtccatggtccaggtggtaaat |
41365870 |
T |
|
| Q |
2038 |
taatcttggaactgttacaactccatattttgagtattttgaataacaccaagaggaagataaagaaggaaatgaaggtgatatt |
2122 |
Q |
| |
|
| | |||| ||||| ||| || |||| | | |||||||| ||| |||||||||| |||| || |||||||||||||||| |
|
|
| T |
41365869 |
tgacaatggagttgttagcgctcaatgttttaacaactttgaatagcactaagaggaagagaaaggagaaaatgaaggtgatatt |
41365785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 1233 - 2068
Target Start/End: Original strand, 31178329 - 31179164
Alignment:
| Q |
1233 |
tttggttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttc---tgagtgataattttcctgttgaatcttgagaagaacat |
1329 |
Q |
| |
|
||||||||| |||||||| | ||||||||||| ||| ||||||| ||||| | ||| || ||| ||| |||||||||||||||||||| ||| ||| |
|
|
| T |
31178329 |
tttggttgtagactaaccagaatgattgatttcatactgtcatctgttaatgtatggtcatgtgacagatcattttcctgttgaatcttgataagtgcat |
31178428 |
T |
|
| Q |
1330 |
ctactagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccat |
1429 |
Q |
| |
|
| |||||||||||||| |||||| |||||||||||||| |||| ||||| |||| ||| ||||||||| ||||||||| |||| | |||| ||||| | |
|
|
| T |
31178429 |
caactagatcttcatccttgctttcttccttgtgaatgtttttatgatcatcgacgatatcttgcaatatcatatcaatctctttatgaaacttttcaaa |
31178528 |
T |
|
| Q |
1430 |
tttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgct |
1529 |
Q |
| |
|
|||||||||| | | ||||| | |||||||| ||||||||||||| ||| ||| ||||||||| ||||||| |||||| | || ||||| ||||||| |
|
|
| T |
31178529 |
tttggtcttcaccccactcacccgttgaagcattttaatagaaggatacacatcagcaatacaaaatcctcccatcaaactcgctatttcctttattgct |
31178628 |
T |
|
| Q |
1530 |
gatctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactg |
1629 |
Q |
| |
|
||| ||||||| ||||||||| ||||||||||||| || ||||| | |||||| | ||||| ||| |||||||| ||| ||||||| ||||||| |
|
|
| T |
31178629 |
gattggaacacttgttggtgtttattccttttcccaaacgctgctcgtgtcgttatcgccgatgtcattgcgaaaatcttatgactgagatttacaactg |
31178728 |
T |
|
| Q |
1630 |
atccttcacttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataac |
1729 |
Q |
| |
|
|||||| |||| || ||| ||||||| |||||| | ||| || | |||||||||| ||||||||||||||||| ||||||| ||||||| || || | |
|
|
| T |
31178729 |
atcctttacttgtagatatcgatttaataagatttgacacctcttattctcttatatacctaaatgattggacatgctttgcacttaataattgtaaagt |
31178828 |
T |
|
| Q |
1730 |
acatatctttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggccta |
1829 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||||| || ||||||||| | ||||| ||| | |||||||||||||| || ||| |
|
|
| T |
31178829 |
acatatctttcgcagttgcctccagtgttctccatatggagagaaggcaatatcagtagcgttgtaaccaaa---agaagacaaaagaaggttcggtcta |
31178925 |
T |
|
| Q |
1830 |
ccactaaagttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagg |
1929 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||| |||||||||| |||||||| |||| |
|
|
| T |
31178926 |
tcacaaaagttgaggtcatgtgttttcataatctctttggccattgatggtgaactaactattatgtatgacacttctcctaattttaggtacattaagg |
31179025 |
T |
|
| Q |
1930 |
gtccatatttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctgg |
2029 |
Q |
| |
|
|||||||||| || |||||| | | || | ||||| | ||||| | || |||| ||||||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
31179026 |
gtccatatttttcagccaaatttctgaagcactgatgaagtaatgagttactaataacttgatgtatgtttcctatgacgggtagtgtccatggtcctgg |
31179125 |
T |
|
| Q |
2030 |
tggcaaattaatcttggaactgttacaactccatatttt |
2068 |
Q |
| |
|
||| ||||| || ||||| |||||||||||||| |||| |
|
|
| T |
31179126 |
tggtaaattgatactggaattgttacaactccatttttt |
31179164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 207; E-Value: 1e-112
Query Start/End: Original strand, 441 - 815
Target Start/End: Complemental strand, 41305617 - 41305243
Alignment:
| Q |
441 |
aataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaa |
540 |
Q |
| |
|
||||||||| || ||||| ||||||||||| ||| || ||| |||||||||||| |||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
41305617 |
aataggaatcaaacataggtcgtgttttcttcctacactaagcccaaatgactcggtcatatcaagttcttgatggctcattccgttgggaagcttccaa |
41305518 |
T |
|
| Q |
541 |
tcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaatt |
640 |
Q |
| |
|
||||||| |||||||| ||||||||| | |||| ||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
41305517 |
tcaaagttataaagtaattcagcaagaggaagttcaacatttgataaggcaaatgcaatgcccggacacatcctccttccagcaccaaatggtatgtatt |
41305418 |
T |
|
| Q |
641 |
cgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagccca |
740 |
Q |
| |
|
| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
41305417 |
caaagtctgtgcctttgaaatcaattgagctattaacaaacctctcgggtttaaaactctcagcttcaacccaatactttggatctcttccaatcgccca |
41305318 |
T |
|
| Q |
741 |
agcattgacagcaacccttgtcttgactggaatctcataaccattgatttggcatctctccctactttctcttgg |
815 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
41305317 |
agcattgacaataaccctagtcttagctggaatatcatactcattgatttggcaactctccctactttctcttgg |
41305243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 171; E-Value: 7e-91
Query Start/End: Original strand, 1244 - 2094
Target Start/End: Complemental strand, 41337412 - 41336562
Alignment:
| Q |
1244 |
actaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactagatcttca |
1343 |
Q |
| |
|
||||||||| |||| |||||||||||| |||||||| || || |||| ||||||| |||||| ||||||| ||||||||||||||| ||||| |||||| |
|
|
| T |
41337412 |
actaacctgaatgactgattttatattttcatcagtcaagggttgttgtgagtgaacattttcatgttgaaccttgagaagaacatcaactaggtcttca |
41337313 |
T |
|
| Q |
1344 |
tcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtcttcgctc |
1443 |
Q |
| |
|
|| ||||||| || ||||| || || | ||||| | |||||||||||||||| || |||||| ||||| || | | | || | | |||||||| ||| |
|
|
| T |
41337312 |
tccttgcttgttttactgtgattgtttctatgatcattgatgatgtcttgcaatatcctatcaatctctccttgtaatctctcaactctggtcttcactc |
41337213 |
T |
|
| Q |
1444 |
tactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaacacttc |
1543 |
Q |
| |
|
|||| | |||||| | ||||||||||||| |||| || ||||||||| ||||||| | | || |||||||||||| |||| | |||| || |
|
|
| T |
41337212 |
tacttaccttttgaagtattttaatagaaggatacaagtcagcaatacaaaattctcccaataggcccaatgcttcctctattgttgatttgaacaattg |
41337113 |
T |
|
| Q |
1544 |
ttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttcacttaca |
1643 |
Q |
| |
|
||||||| || || |||||||||| || | || || |||||||| ||| |||| |||||| || || ||||||||| | |||||||||| || || |
|
|
| T |
41337112 |
ttggtgtctgttctttttcccaaacgctgaacgtgccacgatcccataagtcattgagaaaatcgacttagagagattaacgattgatccttcatttgca |
41337013 |
T |
|
| Q |
1644 |
gttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgta |
1743 |
Q |
| |
|
| ||||||||||||||||| | ||| || | ||||||||| | ||||| ||||||||||| ||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
41337012 |
gatattgatttaacaagatcggacacctcttcttctcttatgaaactaaaagattggacacgttttgcacttaatagctctacaacacatatctttcgta |
41336913 |
T |
|
| Q |
1744 |
gttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgag |
1843 |
Q |
| |
|
||| ||||| ||||||| ||| | ||||| || ||| |||||| |||| |||||| | | | ||||||| ||||||||| ||| ||| ||| |
|
|
| T |
41336912 |
attgtctccaaagttctccgtatgtagagaaagcaatatctctagcattgtaagtaaatactctaggtaaaagaacatttggcctatcacaaaatgtgat |
41336813 |
T |
|
| Q |
1844 |
atcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatct |
1943 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||||||||||| ||| ||||| ||| |||||| ||| |||| |||||| ||||||||||| ||| |
|
|
| T |
41336812 |
gtcatgtgttttcataatctcttttgccatttctggtgaactaactactacatatggtacctctcctagtttaaggtgcatcaaaggtccatatttttct |
41336713 |
T |
|
| Q |
1944 |
gccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaattaatct |
2043 |
Q |
| |
|
||||| ||| || |||||||||| ||| |||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||| || | |
|
|
| T |
41336712 |
gccaattttttgaagaggtgatgggggggtgagctgccactaatctggtgtatgtttcctatgaggggtagtttccatggtcctggtggcaatttggtag |
41336613 |
T |
|
| Q |
2044 |
tggaactgttacaactccatattttgagtattttgaataacaccaagagga |
2094 |
Q |
| |
|
||||| ||||| |||||||| ||| | ||||||||||| ||| ||||||| |
|
|
| T |
41336612 |
tggaattgttaaaactccatctttgaactattttgaatagcactaagagga |
41336562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 153; E-Value: 4e-80
Query Start/End: Original strand, 1238 - 1450
Target Start/End: Complemental strand, 41310769 - 41310557
Alignment:
| Q |
1238 |
ttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactaga |
1337 |
Q |
| |
|
|||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
41310769 |
ttgtagacttacctggatgattgatttcatattgtcatccgttaaaggatgttctgagtgataattttcctgtttaatcttgagaagaacatctactaga |
41310670 |
T |
|
| Q |
1338 |
tcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtct |
1437 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||| |||||| |||||||||||||| || |
|
|
| T |
41310669 |
tcttcatcattgctatcttccttgcgaatgcttttgtgatcgtcgatgatgtcttgcaatatcatataaatctctttgtgaactttttccattttggcct |
41310570 |
T |
|
| Q |
1438 |
tcgctctactcaa |
1450 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
41310569 |
tcgccctactcaa |
41310557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 130; E-Value: 2e-66
Query Start/End: Original strand, 1653 - 2038
Target Start/End: Original strand, 31185277 - 31185662
Alignment:
| Q |
1653 |
ttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctcc |
1752 |
Q |
| |
|
||||||||||| | ||| || | |||||||||| |||||||||||| |||||||||||| ||||||| || || | |||||||||||| |||||||||| |
|
|
| T |
31185277 |
ttaacaagatttgacacctcttcttctcttatatacctaaatgattagacacgctttgcacttaataattgtaaagtacatatctttcgcagttgcctcc |
31185376 |
T |
|
| Q |
1753 |
accgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgt |
1852 |
Q |
| |
|
| ||||| ||||| | ||||| || | ||||||| | |||||||||||||||||||||||||| |||||| ||| ||| ||||||||| |||||||| |
|
|
| T |
31185377 |
aatgttcttcatatgtagagaaagcaataccagtagcgttgtaactaaatattgtggacaaaagaaagtttggtctatcacaaaagttgaggtcatgtgt |
31185476 |
T |
|
| Q |
1853 |
tttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaat |
1952 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||| |||| ||| |||||||||||||| || || ||| | |
|
|
| T |
31185477 |
tttcataatctctttggccattgatggtgaactaactattaggtatgatacctctcctagttttaggtgcattaagggtccatatttttcagctaaattt |
31185576 |
T |
|
| Q |
1953 |
ttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaatt |
2038 |
Q |
| |
|
|| || | ||||| |||||||| | || ||||| ||||||| ||||||||||| ||||||| ||| ||||||| |||| ||||| |
|
|
| T |
31185577 |
ttgaagcactgatgaggcaatgagtttctaataatttgatgtatgtttcctatgatgggtagtgtccgtggtccttgtggtaaatt |
31185662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 129; E-Value: 8e-66
Query Start/End: Original strand, 1679 - 2054
Target Start/End: Complemental strand, 41286139 - 41285761
Alignment:
| Q |
1679 |
tcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatc---gagaat |
1775 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||| |||||| ||||| ||||| ||||||||| ||| |||||| |
|
|
| T |
41286139 |
tcttatagaactaaatgattgaacacgctttgcacttaatagctctataacacatagctttcgcagttgtctccagtgttctccatgtataatagagaat |
41286040 |
T |
|
| Q |
1776 |
ataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaattt |
1875 |
Q |
| |
|
|| ||| ||| || |||| ||| |||||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
41286039 |
gcaatatctgtattattgtaagtaagtattgtgggcaaaagaaggtttggcctatcacaaaatgtgatgtcatgtgttttcataatctctttggccattt |
41285940 |
T |
|
| Q |
1876 |
ctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaatttaaaacggtgatggggcaatga |
1975 |
Q |
| |
|
|||||||||||||||||| ||| |||||| |||||| ||| | || ||||| ||||||||||| ||| |||||| ||| || | |||||||||| ||| |
|
|
| T |
41285939 |
ctggtgaactaactattatgtaaggcacctctcctagttttaagtgcatcagaggtccatatttctcttccaaaattttgaagcaatgatggggcagtga |
41285840 |
T |
|
| Q |
1976 |
tctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttggaactgtta |
2054 |
Q |
| |
|
|| || ||||| ||||||| |||||||||||||| ||| |||||||||| ||||| ||||| || ||||||||||| |
|
|
| T |
41285839 |
gctactaataatatgatgtatatttcctatgaggggcagtgtccatggtccaggtggtaaattgatagtggaactgtta |
41285761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 119; E-Value: 7e-60
Query Start/End: Original strand, 417 - 663
Target Start/End: Complemental strand, 41370167 - 41369921
Alignment:
| Q |
417 |
caataaatattaaaaacgacgaggaataggaattaagcatagatcgtgttttctacctgcagtaatcccaaatgactcagtcatatcaagttcttcattc |
516 |
Q |
| |
|
||||| |||| ||| ||||||| ||||||||| ||||||| ||| | |||||| |||| |||||||||||||| ||||||||||| | |||||||||| |
|
|
| T |
41370167 |
caatacatatcaaatacgacgaataataggaatcaagcataaatcatattttcttactgctgtaatcccaaatgattcagtcatatccaattcttcattc |
41370068 |
T |
|
| Q |
517 |
ttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctggacacatcctcc |
616 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||| |||||||||||||||| |
|
|
| T |
41370067 |
ttcatttcattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaacgttaggtaagccaaacataatgcctggacacatcctcc |
41369968 |
T |
|
| Q |
617 |
ttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatca |
663 |
Q |
| |
|
| || ||| ||||||||||| |||| ||||| | |||||||||||| |
|
|
| T |
41369967 |
tccctgcatcaaatggtatgtattcaaagtctatacctttgaaatca |
41369921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 1676 - 2122
Target Start/End: Complemental strand, 41369624 - 41369191
Alignment:
| Q |
1676 |
ttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatcgagaat |
1775 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
41369624 |
ttctcttatggacctaaatgattggacacgctttgcatttaatagctctacaacacatatctttcgtagttgcctccaatgttctccatattctgagaag |
41369525 |
T |
|
| Q |
1776 |
ataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaattt |
1875 |
Q |
| |
|
|| ||| |||||| |||||||| |||||||||||| ||| || |||| |||||||||||||||| | ||||||||||| |||| |
|
|
| T |
41369524 |
gaaatatctttagcat-------------tgtggacagaagaaggtttggtctattacaaaaggtgagatcatgtgtttttagaatctctttggccattt |
41369438 |
T |
|
| Q |
1876 |
ctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatatttatctgccaaaaatttaaaacggtgatggggcaatga |
1975 |
Q |
| |
|
|||||||||||||||||| | ||| | | |||||| ||| || | ||| |||||||||||||| | ||||||| ||| || | |||||||||| ||| |
|
|
| T |
41369437 |
ctggtgaactaactattatgcatgatatctctcctagttttagatgcattaagggtccatatttctttgccaaatttttgaagcaatgatggggcagtga |
41369338 |
T |
|
| Q |
1976 |
tctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaattaatcttggaactgttacaactccatattttgagtatt |
2075 |
Q |
| |
|
|| || ||||| ||||||| |||||| ||||||| ||| ||||||| |||||||| ||||| || ||||| |||||| |||||| | |||| |||| |
|
|
| T |
41369337 |
gctactaataatttgatgtatatttcctgtgaggggcagtgtccatggccctggtggtaaattgatggtggaatagttacacctccatctcttgactatt |
41369238 |
T |
|
| Q |
2076 |
ttgaataacaccaagaggaagataaagaaggaaatgaaggtgatatt |
2122 |
Q |
| |
|
|||| || || |||| ||||| |||| |||||||||| || ||||| |
|
|
| T |
41369237 |
ttgagtagcaaaaagatgaagagaaaggaggaaatgaatgtaatatt |
41369191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 86; E-Value: 3e-40
Query Start/End: Original strand, 1002 - 1168
Target Start/End: Complemental strand, 41310969 - 41310799
Alignment:
| Q |
1002 |
ctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaatggattaacattaacactatctactctctaaatcaacatgaattttcttccatacaa |
1101 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
41310969 |
ctctgacgatgtttcggtaccagcagtgaacatgtcctacaaatggattaacattaacattatctactctctaaaccaacatgcattttcttccatacaa |
41310870 |
T |
|
| Q |
1102 |
cactacccaaaaat----taagtcattaatttgatgttctctccaaaatactattaactgtcaagataatc |
1168 |
Q |
| |
|
| | |||||||| | || |||| | |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
41310869 |
cgccacccaaaattaagttaggtcaattatttgatgttctctccaaaatactattattagtcaagataatc |
41310799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 83; E-Value: 2e-38
Query Start/End: Original strand, 849 - 1039
Target Start/End: Complemental strand, 41432112 - 41431922
Alignment:
| Q |
849 |
tgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgct |
948 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||| || |||||| |||||||||||||| || || ||||||||||||||||||| |||||||||||| |
|
|
| T |
41432112 |
tgtttctttgatgatagacttcaagtatatcaattagtgcaactcagtctcatccacataccctttcatatcaaacactcttcttacctcagcttgtgct |
41432013 |
T |
|
| Q |
949 |
tgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcct |
1039 |
Q |
| |
|
| |||||| ||||| | ||| || ||||| ||||||||||||| | ||| || ||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
41432012 |
tcttccatcacattcgggttcttcgccatctcagacatcgcccataagacaaccactgacgaagtttcagtaccagcagaaaacaagtcct |
41431922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 1461 - 1640
Target Start/End: Complemental strand, 41286322 - 41286143
Alignment:
| Q |
1461 |
aatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaacacttcttggtgtttgctccttt |
1560 |
Q |
| |
|
||||||||||||||| ||||||| ||||| |||| ||||||| || || || ||||||| |||||| || | || ||||||||||| || || ||| |
|
|
| T |
41286322 |
aatttaatagaaggatacaaatcaacaatgcaaaatcctcccatcaggctcaatgcttcctccattgctaatttgaatgcttcttggtgtatgttctttt |
41286223 |
T |
|
| Q |
1561 |
tcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttcactt |
1640 |
Q |
| |
|
||||||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41286222 |
tcccaaaagttgcacgcgccgttatcccataggttgttgacaaaatcttctgagtgagattaacaactgatccttcactt |
41286143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 72; E-Value: 8e-32
Query Start/End: Original strand, 1237 - 1396
Target Start/End: Complemental strand, 41286519 - 41286360
Alignment:
| Q |
1237 |
gttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactag |
1336 |
Q |
| |
|
||||| ||||||||||||||| || ||||| ||| |||||||| || ||||||| |||||| | | |||||||||||||||||||||||||||| | ||| |
|
|
| T |
41286519 |
gttgtagactaacctggatgactgcttttaaattatcatcagtcaagggatgttatgagtgctcactttcctgttgaatcttgagaagaacatcaattag |
41286420 |
T |
|
| Q |
1337 |
atcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaa |
1396 |
Q |
| |
|
||||||||| |||||| ||||| ||||| | ||||| ||||| || ||||||||| |||| |
|
|
| T |
41286419 |
atcttcatctttgctttcttccatgtgacttcttttatgatcatcaatgatgtctggcaa |
41286360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 64; E-Value: 5e-27
Query Start/End: Original strand, 1676 - 1893
Target Start/End: Complemental strand, 41359885 - 41359676
Alignment:
| Q |
1676 |
ttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatctttcgtagttgcctccaccgttctccatatatcgagaat |
1775 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| | |||||||| ||| ||||||| | |||||| ||||| ||||| ||||||||||||| | |
|
|
| T |
41359885 |
ttctcttatggacctaaatgattggacacatttt-cacttaatagctctgtaacacacaactttcggagttgtctccagtgttctccatatatgca---- |
41359791 |
T |
|
| Q |
1776 |
ataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcatcatctctttggcaattt |
1875 |
Q |
| |
|
| ||| ||| || |||| ||| |||||||| |||||||||||||||||| ||| |||| | || |||||||||||||| |||||||||||||||| |
|
|
| T |
41359790 |
---atatctgtattattgtaagtaagtattgtggccaaaagaaggtttggcctgtcaccaaaggtaaggtcatgtgttttcataatctctttggcaattt |
41359694 |
T |
|
| Q |
1876 |
ctggtgaactaactatta |
1893 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
41359693 |
ctggtggactaactatta |
41359676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 41311759 - 41311706
Alignment:
| Q |
492 |
ctcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaa |
545 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
41311759 |
ctcagtcatatcaagttcttcattattcattccattgggaagctttcaatcaaa |
41311706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 1097 - 1153
Target Start/End: Complemental strand, 41332654 - 41332598
Alignment:
| Q |
1097 |
tacaacactacccaaaaattaagtcattaatttgatgttctctccaaaatactatta |
1153 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
41332654 |
tacaacgctacccaaaagttaagtcattaatttgatgttctctccaaattactatta |
41332598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 1320 - 1483
Target Start/End: Complemental strand, 41369918 - 41369754
Alignment:
| Q |
1320 |
agaagaacatctactagatcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagc-tctctgtga |
1418 |
Q |
| |
|
||||||||||| ||||| ||||| || ||| || |||| | ||| || |||||||||| | |||||| ||||||||| | |||||| || | ||| ||| |
|
|
| T |
41369918 |
agaagaacatcaactaggtcttcttccttgatttcttctctatgattgtttttgtgatcattgatgatatcttgcaatataatatcatgcctttctctga |
41369819 |
T |
|
| Q |
1419 |
agtttttccattttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatc |
1483 |
Q |
| |
|
|||||||||||||||||||| || ||||| | | |||||| | ||||||||||||| ||||||| |
|
|
| T |
41369818 |
agtttttccattttggtctttgccctacttaccctttgaagtattttaatagaaggatacaaatc |
41369754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 2243 - 2293
Target Start/End: Complemental strand, 41309652 - 41309602
Alignment:
| Q |
2243 |
tatttgtatcaaccaattgcgattaaaataaattattagacctttcgcttg |
2293 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
41309652 |
tatttgtattaaccaattgcgattaaaatatattattagacctttcgcttg |
41309602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 41333497 - 41333428
Alignment:
| Q |
478 |
gtaatcccaaatgactc--agtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaa |
545 |
Q |
| |
|
|||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
41333497 |
gtaagcccaaatgactctcaatcatatcaagttcttcattattcattccattgggaagctttcaatcaaa |
41333428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1498 - 1638
Target Start/End: Complemental strand, 41431180 - 41431040
Alignment:
| Q |
1498 |
ctcccaacaaacttgatacttcctctattgctgatctaaacacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgt |
1597 |
Q |
| |
|
|||||||||||||| || |||||| ||||| | | ||||||||| |||||||||| ||||||| || ||| | | || | ||||||| ||| |||| | |
|
|
| T |
41431180 |
ctcccaacaaacttactatttcctccattgcagttataaacacttgttggtgtttggtccttttgccgaaaactgttcttgatgttatctcatgtgtcat |
41431081 |
T |
|
| Q |
1598 |
tgacaaaatcttctgagtgagattaacaactgatccttcac |
1638 |
Q |
| |
|
||| || || ||| ||||||||||||||| ||||||||||| |
|
|
| T |
41431080 |
tgagaatatgttccgagtgagattaacaattgatccttcac |
41431040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 2243 - 2293
Target Start/End: Complemental strand, 41320871 - 41320821
Alignment:
| Q |
2243 |
tatttgtatcaaccaattgcgattaaaataaattattagacctttcgcttg |
2293 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
41320871 |
tatttgtattaaccaattgcgattaaaatatattattacacctttcgcttg |
41320821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 611
Target Start/End: Complemental strand, 41329594 - 41329489
Alignment:
| Q |
506 |
gttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaatattgggtaaggcaaatgcaatacctgg |
605 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||||||||| |||||||| ||||||| ||| |||| ||||| ||| |||||||||| | ||| |
|
|
| T |
41329594 |
gttcttcattattcattccattggaaagctttcaatcaaagtcataaagtaattcagcaagacgcagttcaacattggctaaaccaaatgcaatgcttgg |
41329495 |
T |
|
| Q |
606 |
acacat |
611 |
Q |
| |
|
|||||| |
|
|
| T |
41329494 |
acacat |
41329489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 1109 - 1170
Target Start/End: Complemental strand, 41324732 - 41324671
Alignment:
| Q |
1109 |
caaaaattaagtcattaatttgatgttctctccaaaatactattaactgtcaagataatctt |
1170 |
Q |
| |
|
||||| ||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
41324732 |
caaaagttaagtcattaatatgatgttctcaccaaaatactattattaatcaagataatctt |
41324671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 41343010 - 41342957
Alignment:
| Q |
170 |
tatgctatctattttaggtggatttcttcctcggcagtcaaggaaaagattctt |
223 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| || ||||||||||||| |
|
|
| T |
41343010 |
tatgctatctatttcaggtggatttcttccttggcaatcctggaaaagattctt |
41342957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 1793 - 1858
Target Start/End: Complemental strand, 41430887 - 41430822
Alignment:
| Q |
1793 |
gtaactaaatattgtggacaaaagaaggtttggcctaccactaaagttgagatcatgtgttttcat |
1858 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||| ||| |||||| | || ||||||||||| |
|
|
| T |
41430887 |
gtaagtaaatattgtagacaaaagaaggtttggcctatcacaaaagtttaagtcttgtgttttcat |
41430822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1964 - 2032
Target Start/End: Complemental strand, 41358775 - 41358707
Alignment:
| Q |
1964 |
atggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtgg |
2032 |
Q |
| |
|
|||| ||||||| ||||| |||||||||||||||||||||| ||||| | | |||||||||| ||||| |
|
|
| T |
41358775 |
atggagcaatgagctgcttataatctgatgtaagtttcctacaaggggcattgtccatggtccaggtgg |
41358707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 1095 - 1150
Target Start/End: Complemental strand, 41328723 - 41328669
Alignment:
| Q |
1095 |
catacaacactacccaaaaattaagtcattaatttgatgttctctccaaaatacta |
1150 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||||||| | |||||||||||||||| |
|
|
| T |
41328723 |
catacaacgctacccaatagttaagtcattaatttgacg-tctctccaaaatacta |
41328669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 13582023 - 13581981
Alignment:
| Q |
104 |
ttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||| |||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
13582023 |
ttctcatccaattttctcactagattgaactagtgttccaaca |
13581981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1429 - 1483
Target Start/End: Complemental strand, 41322369 - 41322315
Alignment:
| Q |
1429 |
ttttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatc |
1483 |
Q |
| |
|
||||||||||| | ||| ||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
41322369 |
ttttggtcttctccctagtcatccattgaagcaatttaatagaaggatacaaatc |
41322315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 267; Significance: 1e-148; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 478 - 1044
Target Start/End: Original strand, 17248448 - 17249014
Alignment:
| Q |
478 |
gtaatcccaaatgactcagtcatatcaagttcttcattcttcattccattgggaagcttccaatcaaagtggtaaagtaaactagcaagaggcaactcaa |
577 |
Q |
| |
|
||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17248448 |
gtaatcccaaatgactcggtcatatctagatcttcattcttcatttcattgggaagcttccaatcaaaatggtaaagtaattgagcaagaggcaactcaa |
17248547 |
T |
|
| Q |
578 |
tattgggtaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaac |
677 |
Q |
| |
|
| ||||||| | |||||||||| || ||||| ||||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||||||||| |
|
|
| T |
17248548 |
tgttgggtatgccaaatgcaatgcccggacaaatcctccttccagcaccaaatggtatgtattcgaaattcatgcctttgaaatcaattgggctattaaa |
17248647 |
T |
|
| Q |
678 |
aaacctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaacccttgtcttgactggaatctca |
777 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||| ||||||| ||| |
|
|
| T |
17248648 |
aaacctttcaggtttgaaactctcagcttcaacccaatacctttgatctcttccaattgcccaaacattaacagcaacccttgtcttagctggaatatca |
17248747 |
T |
|
| Q |
778 |
taaccattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtata |
877 |
Q |
| |
|
|| || |||||| | ||| | |||||||||| ||| |||| |||||||| ||| ||||| || ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
17248748 |
tacccgttgattcgacatttttccctactttgtctaggaatcaacaatggtacaataggatgcagcctcagtgtttctttgatgacagaatttaagtata |
17248847 |
T |
|
| Q |
878 |
tcaattggtacaactctgtctcatccacatatccctttttatcaaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccat |
977 |
Q |
| |
|
| ||||| | |||||| || ||||| ||||| |||||| ||||||| || |||||||| |||||||||||| |||||| || |||| |||||||| || |
|
|
| T |
17248848 |
ttaattgatccaactccgtttcatctacatacccctttctatcaaaaacacttcttacctcagcttgtgctgcttccatcacctttgggttttttattat |
17248947 |
T |
|
| Q |
978 |
cgcagacatcgcccaaatcacagcctctgacgatgtttcagtaccagcaccaaacatgtcctgcaaa |
1044 |
Q |
| |
|
| ||||||| |||| | |||| | | ||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
17248948 |
ctcagacattccccataacacaatcccagacgatgtttcgctaccagcagcaaacatgtcctgcaaa |
17249014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-120
Query Start/End: Original strand, 1238 - 2122
Target Start/End: Original strand, 17249070 - 17249954
Alignment:
| Q |
1238 |
ttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactaga |
1337 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| || | || || || || || | |||| ||||||||||||| |||| |||| |||||| |
|
|
| T |
17249070 |
ttgtagactaacctggatgattgattttatattgtcatcagtcaatgaattttgtgggtaatcactttcttgttgaatcttgataagagcatcaactaga |
17249169 |
T |
|
| Q |
1338 |
tcttcatcattgcttgcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctctgtgaagtttttccattttggtct |
1437 |
Q |
| |
|
|||||||| |||| ||||| || || || ||||||| || ||||| ||||||||| ||||||||| || || |||||||||||||||||||| | |
|
|
| T |
17249170 |
tcttcatccttgcgtgctttgttttgtccatttctgtgatcatctatgatatcttgcaatatcatatcaatttccctatgaagtttttccattttggttt |
17249269 |
T |
|
| Q |
1438 |
tcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgatacttcctctattgctgatctaaa |
1537 |
Q |
| |
|
|| | ||| | | || ||| | ||| ||||||||| ||||||| |||||||||| |||||||||||||| || |||||||||||||||| | || |
|
|
| T |
17249270 |
tcacctgacttacccttttaagtattttgatagaaggatacaaatcaacaatacaaaatcctcccaacaaactcactatttcctctattgctgatttgaa |
17249369 |
T |
|
| Q |
1538 |
cacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttca |
1637 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||| |
|
|
| T |
17249370 |
cacttgttggtgtttgttccttttcccgaaagctgctcgcgccactatcccatatgttaaagaagaaatcttctgagtgagattaacaacacatccttca |
17249469 |
T |
|
| Q |
1638 |
cttacagttattgatttaacaagattcgtcacttcattttctcttatagacctaaatgattggacacgctttgcgcttaatagttctataacacatatct |
1737 |
Q |
| |
|
||| | ||||||||||||||||| |||||| | |||||||| || ||||| ||||||||||| || | ||||| |||| | ||| ||||||| |
|
|
| T |
17249470 |
cttgaaaatattgatttaacaagatctaacacttcttcttctcttaccgatctaaacgattggacacgtttaacacttaaaagttgttcaacgcatatct |
17249569 |
T |
|
| Q |
1738 |
ttcgtagttgcctccaccgttctccatatatcgagaatataacatcagtagcatcgtaactaaatattgtggacaaaagaaggtttggcctaccactaaa |
1837 |
Q |
| |
|
|||| |||||| |||| ||||||||||| | ||||||| || ||||| ||||| |||| ||||||||||||||||||||||||| |||||| ||| ||| |
|
|
| T |
17249570 |
ttcgcagttgcttccagtgttctccatatgtagagaatacaatatcagaagcattgtaagtaaatattgtggacaaaagaaggttaggcctatcacaaaa |
17249669 |
T |
|
| Q |
1838 |
gttgagatcatgtgttttcatcatctctttggcaatttctggtgaactaactattacgtatggcaccactcctaatttcaggtacatcaagggtccatat |
1937 |
Q |
| |
|
| | || |||||||||||||| ||||||||||| ||| ||||||||||||||||| || ||| ||| |||||| ||| || ||| |||||||||||| |
|
|
| T |
17249670 |
ggtaaggtcatgtgttttcataatctctttggccattgttggtgaactaactattaggtgtggtacctctcctagttttagcagcattaagggtccatat |
17249769 |
T |
|
| Q |
1938 |
ttatctgccaaaaatttaaaacggtgatggggcaatgatctgctgataatctgatgtaagtttcctatgaggggtagtctccatggtcctggtggcaaat |
2037 |
Q |
| |
|
||||||||||||| || || ||||||||||| | ||| ||||||| ||||||| ||||||||| | ||| | |||||||| | || || | | |
|
|
| T |
17249770 |
ttatctgccaaaatcttgaaccggtgatggggaagtgaggaagtgataatttgatgtatgtttcctataaagggcaaagtccatggtgcaggcggtgagt |
17249869 |
T |
|
| Q |
2038 |
taatcttggaactgttacaactccatattttgagtattttgaataacaccaagaggaagataaagaaggaaatgaaggtgatatt |
2122 |
Q |
| |
|
|||| | | | |||||||||||||| |||| | |||||| | || |||||| ||||||| |||| ||| |||||||||||||| |
|
|
| T |
17249870 |
taatagtaggattgttacaactccatcttttaactatttttagtagcaccaaaaggaagagaaaggaggccatgaaggtgatatt |
17249954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 10119860 - 10119806
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10119860 |
tacattgtgtttttcttatccaattttctcacgagattcaactagtgttccaaca |
10119806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000009
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 24490829 - 24490882
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
24490829 |
tacattgtgtttttct-atccaattttctcactagatttaactagtgttccaaca |
24490882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 653740 - 653783
Alignment:
| Q |
104 |
ttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
|||| |||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
653740 |
ttctcatccaattttctcactagattaaactagtgttccaacag |
653783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 2e-17; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 10437402 - 10437457
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10437402 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaacag |
10437457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 10451112 - 10451167
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10451112 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaacag |
10451167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 9974008 - 9974062
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9974008 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaaca |
9974062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 7358075 - 7358130
Alignment:
| Q |
94 |
cattatgtttttcttatccaattttctcattagattcaactagtgttccaacagat |
149 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7358075 |
cattgtgtttttcttatccaattttctcaaaagattcaactagtgttccaacagat |
7358130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 24529132 - 24529183
Alignment:
| Q |
95 |
attatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
24529132 |
attatgtttttcttatccaattttctcactagatttaactagtgttccaaca |
24529183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 28291889 - 28291840
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaacaga |
148 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
28291889 |
tgtttttcttatccaattttctaattagatttaactagtgttccaacaga |
28291840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 33227058 - 33227113
Alignment:
| Q |
92 |
tacattatgtttttc-ttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
33227058 |
tacattgtgtttttccttatccaattttctcactagatttaactagtgttccaaca |
33227113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 2e-17; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 33088670 - 33088615
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
33088670 |
tacattatgtttttcttatccaattttctcactagatttaactagtgttccaacag |
33088615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 13022795 - 13022842
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
13022795 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
13022842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 53120267 - 53120314
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
53120267 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
53120314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000009
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 38436324 - 38436270
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| |||| ||| ||||||| |
|
|
| T |
38436324 |
tacattgtgtttttcttatccaattttctcactagatttaactggtgctccaaca |
38436270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1835 - 1877
Target Start/End: Complemental strand, 22901838 - 22901796
Alignment:
| Q |
1835 |
aaagttgagatcatgtgttttcatcatctctttggcaatttct |
1877 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
22901838 |
aaagttgagatcatgtgttttcattatctcttttgccatttct |
22901796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 7e-17; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 19478877 - 19478931
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19478877 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaaca |
19478931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 17289660 - 17289607
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17289660 |
tacattgtgtttttct-atccaattttctcactagattcaactagtgttccaaca |
17289607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 746
Target Start/End: Original strand, 12438292 - 12438434
Alignment:
| Q |
604 |
ggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaaacctctcaggtttaaaactctcag |
703 |
Q |
| |
|
|||||||| || |||||||||||||| ||||| || ||||| | | |||||| |||||||||| | || || ||| |||||||| ||||| | || |
|
|
| T |
12438292 |
ggacacattcttcttccagcaccaaaaggtataaactcgaaattagaccctttgtaatcaattggacaatcaataaatctctcaggattaaacttttctc |
12438391 |
T |
|
| Q |
704 |
cttcaacccaataccttggatctcttccaatagcccaagcatt |
746 |
Q |
| |
|
||||| ||||||| |||| ||||||||||| ||||| ||||| |
|
|
| T |
12438392 |
cttcattccaatactttgggtctcttccaattgcccatgcatt |
12438434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 7e-17; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 42915302 - 42915356
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42915302 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaaca |
42915356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000006
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 5089818 - 5089875
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaacagat |
149 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
5089818 |
tacattgtgtttttcttatccaattttctcactaaattcaactagtgtttcaacagat |
5089875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 7e-17; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 39746728 - 39746674
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39746728 |
tacattgtgtttttcttatccaattttctcactagattcaactagtgttccaaca |
39746674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 5602224 - 5602169
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
5602224 |
tacattgtgtttttcttatccaattttctcactaaattcaactagtgttccaacag |
5602169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 14582487 - 14582541
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
14582487 |
tacattgtgtttttcttatccaattttctcactagatttaactagtgttccaaca |
14582541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 26650482 - 26650428
Alignment:
| Q |
92 |
tacattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
26650482 |
tacattgtgtttttcttatccaattttctcactagatttaactagtgttccaaca |
26650428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000006
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 31289503 - 31289548
Alignment:
| Q |
102 |
ttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31289503 |
ttttcttatccaattttctcactagattcaactagtgttccaacag |
31289548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 13891551 - 13891598
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
13891551 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
13891598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 38734872 - 38734919
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
38734872 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
38734919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 548
Target Start/End: Original strand, 12609806 - 12609837
Alignment:
| Q |
517 |
ttcattccattgggaagcttccaatcaaagtg |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
12609806 |
ttcattccattgggaagcttccaatcaaagtg |
12609837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 2468 - 2421
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2468 |
tgtttttcttatccaattttctcactagattcaactagtgttccaaca |
2421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132; HSP #2
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 10428 - 10381
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10428 |
tgtttttcttatccaattttctcactagattcaactagtgttccaaca |
10381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 31031302 - 31031349
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31031302 |
tgtttttcttatccaattttctcattagatttaactagtgttccaaca |
31031349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 19430779 - 19430826
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19430779 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
19430826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 19436221 - 19436268
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19436221 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
19436268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 19566928 - 19566975
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19566928 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
19566975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 19572370 - 19572417
Alignment:
| Q |
99 |
tgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19572370 |
tgtttttcttatccaattttctcactagatttaactagtgttccaaca |
19572417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 13584923 - 13584969
Alignment:
| Q |
101 |
tttttcttatccaattttctcattagattcaactagtgttccaacag |
147 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
13584923 |
tttttcttatccaattttctcactagatttaactagtgttccaacag |
13584969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 33616109 - 33616064
Alignment:
| Q |
101 |
tttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
33616109 |
tttttcttatccaattttctcactagatttaactaatgttccaaca |
33616064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 2368 - 2420
Alignment:
| Q |
94 |
cattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
2368 |
cattgtgtttttcttatccaattttctcactaggttcaactagtgttccaaca |
2420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 7622 - 7674
Alignment:
| Q |
94 |
cattatgtttttcttatccaattttctcattagattcaactagtgttccaaca |
146 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
7622 |
cattgtgtttttcttatccaattttctcactaggttcaactagtgttccaaca |
7674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 32; Significance: 0.00000006; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 548
Target Start/End: Original strand, 62054 - 62085
Alignment:
| Q |
517 |
ttcattccattgggaagcttccaatcaaagtg |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
62054 |
ttcattccattgggaagcttccaatcaaagtg |
62085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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