View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11654_low_37 (Length: 251)
Name: NF11654_low_37
Description: NF11654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11654_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 9994408 - 9994185
Alignment:
| Q |
18 |
ttaggttgcaaagagtaccaagcagtaccaagtgatttaatctcctcatcaaaaacaagtgacataggaactttaagttgaccaacaaagtcatcaatca |
117 |
Q |
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| T |
9994408 |
ttaggttgcaaagagtaccaagcagtaccaagtgatttaatctcctcatcaaaaacaagtgacataggaactttaagttgaccaacaaagtcatcaatca |
9994309 |
T |
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| Q |
118 |
aaaacttatcttcatccataacagaaactaccaactcttctttaagatcatccaccttaaaactaaactcttcatcccatttaggattcaaactcttctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9994308 |
aaaacttatcttcatccataacagaaactaccaactcttctttaagatcatccaccttaaaactaaactcttcatcccatttaggattcaaactcttctt |
9994209 |
T |
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| Q |
218 |
aattactttagtcctaaacctttg |
241 |
Q |
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||| |||||||||||||||||||| |
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| T |
9994208 |
aatcactttagtcctaaacctttg |
9994185 |
T |
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