View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11654_low_51 (Length: 209)
Name: NF11654_low_51
Description: NF11654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11654_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 40305915 - 40305737
Alignment:
| Q |
12 |
agcataggtcatattctaaaaatgagtagaagcttcgctgctttgtagaatcaaatctaatatagaactaagtttctgacgttctgcagaaacttgacac |
111 |
Q |
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| T |
40305915 |
agcatagggcatattctaaaaatgagtagaagcttcgctgctttgtagaatcaaatctaatatagaactaagtttctgacattctgcagaaacttgacac |
40305816 |
T |
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| Q |
112 |
aactgatggtatgttatcttgtgacattaaagacacgctttcaaactttaaaaacagagttgattcatccatggtttaa |
190 |
Q |
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| T |
40305815 |
aaccgatggtatgttatcttgtgacattaaagacacgctttcaaactttaaaaacagagttgattcatccatggtttaa |
40305737 |
T |
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