View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_high_28 (Length: 386)
Name: NF11655_high_28
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 18866033 - 18865663
Alignment:
| Q |
1 |
taaacacataacaagaatctaatctatgaaaaacatattatttgaacaaaataaacataacaaacaaaagagtatttgaaatcggtgacaaactaacctt |
100 |
Q |
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| T |
18866033 |
taaacacataacaagaatctaatctatgaaaaacatattattttaacaaaataaacataacaaacaaaagagtatttgaaatcggtgacaaactaacctt |
18865934 |
T |
|
| Q |
101 |
tggaacatgtcttcaagacaggaatcgatcttaagcatttgtttaagagcagaatctctacaatccttcaagagcttcaactcctccgtgatagcacggt |
200 |
Q |
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| T |
18865933 |
tgaaacatgtcttccagacaggaatcgatcttaagcatttgtttaagagcagaatctctacaatccttcaagagcttcaactcctccgtgatagcacggt |
18865834 |
T |
|
| Q |
201 |
agaacttttgaggcttgtcctgctcccgcatcacgtcctgcatcacaccgctcagaaacttcccaaccctagactttagcgtaagaggcacgttaagtct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18865833 |
agaacttttgaggcttgtcctgctcccgcatcacgtcctgcatcacaccgctcagaaacttcccaaccctagactttagcgtaagaggcacgttaagtct |
18865734 |
T |
|
| Q |
301 |
tctgaacttgttgccgctgttataatcactatctgaattcactttcaccttgataatatttggtctgtgct |
371 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
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| T |
18865733 |
tctgaacttgttgccgctgttataatcactatctgaattcactttcatcttgataatatttggtctatgct |
18865663 |
T |
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