View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11655_high_46 (Length: 305)
Name: NF11655_high_46
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_high_46 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 37362322 - 37362472
Alignment:
| Q |
1 |
aaaaccctaatccaacaagtttgtaagttgnnnnnnncatcaagagagcaaaaggagaagccatccatgagcatgaggatataatcctcaataagcaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| | |||||||||| |||||||||||||||||| |
|
|
| T |
37362322 |
aaaaccctaatccaacaagtttgtaagttgaaaaaaacatcaagagagcaaagggagaagcaatccataaccatgaggatacaatcctcaataagcaaaa |
37362421 |
T |
|
| Q |
101 |
gtagcaagagagcatttggtatgttactttgctttcccaccccatcaattt |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37362422 |
gtagcaagagagcatttggtatgttactttgctttcccaccccatcaattt |
37362472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University