View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_high_51 (Length: 277)
Name: NF11655_high_51
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_high_51 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 3112120 - 3111879
Alignment:
| Q |
19 |
tcagtcatgagacaatcaattacggaagaagagctattgctgacaggaaatgctctaccatcatcctcaatctataaacagttgatcataaattagaaaa |
118 |
Q |
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| T |
3112120 |
tcagtcatgagacaatcaattacagaagaagagctattgctgacaggaaatgctctaccatcatcctcaatctataaacagttgatcataaattagaaaa |
3112021 |
T |
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| Q |
119 |
ttacacaaaaagcaaaaacgagtaacaaaaggcttttcaaagaacaaccttcagttccaccccatgagaggtaaaccaagacatggtatccactggaccg |
218 |
Q |
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| T |
3112020 |
ttacacaaaaagcaaaaacgagtaacaaaaggcttttcaaagaacaaccttcaattccaccccatgagaggtaaaccaagacatggtatccactggaccg |
3111921 |
T |
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| Q |
219 |
tgcacattaaagaaagatcctctcagttccttgtgacctctt |
260 |
Q |
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| T |
3111920 |
tgcacattaaagaaagatcctctcagttccttgtgacctctt |
3111879 |
T |
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