View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11655_low_14 (Length: 549)

Name: NF11655_low_14
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11655_low_14
NF11655_low_14
[»] chr3 (5 HSPs)
chr3 (16-527)||(36322754-36323263)
chr3 (56-527)||(36302742-36303209)
chr3 (32-77)||(3924119-3924164)
chr3 (33-89)||(2082085-2082141)
chr3 (31-79)||(18171789-18171837)
[»] scaffold0153 (3 HSPs)
scaffold0153 (31-91)||(16124-16184)
scaffold0153 (31-91)||(31381-31441)
scaffold0153 (31-78)||(31713-31760)
[»] chr7 (4 HSPs)
chr7 (30-83)||(27720468-27720521)
chr7 (31-83)||(20502790-20502842)
chr7 (31-83)||(23117277-23117329)
chr7 (35-83)||(34925253-34925301)
[»] chr2 (7 HSPs)
chr2 (31-92)||(1163343-1163404)
chr2 (31-92)||(1169410-1169471)
chr2 (28-81)||(38766707-38766760)
chr2 (34-82)||(24098474-24098522)
chr2 (181-217)||(28811273-28811308)
chr2 (27-83)||(29395964-29396020)
chr2 (34-78)||(35849470-35849514)
[»] chr8 (1 HSPs)
chr8 (32-79)||(19914105-19914152)
[»] chr6 (3 HSPs)
chr6 (32-78)||(31582028-31582074)
chr6 (32-78)||(31738972-31739018)
chr6 (31-83)||(33532410-33532461)
[»] chr5 (4 HSPs)
chr5 (32-78)||(33178505-33178551)
chr5 (57-90)||(10125543-10125576)
chr5 (181-217)||(877738-877773)
chr5 (35-83)||(40213811-40213859)
[»] chr1 (3 HSPs)
chr1 (54-83)||(8344571-8344600)
chr1 (33-77)||(7210566-7210610)
chr1 (31-83)||(15707551-15707603)


Alignment Details
Target: chr3 (Bit Score: 404; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 16 - 527
Target Start/End: Complemental strand, 36323263 - 36322754
Alignment:
Q  16 gattgatgtcttaagcagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactacagcgatatcgtgccacaattctagtt 115  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36323263 gattgaggtcttaagcagtgttgtcaatcgcagatggcgaaaaatagtggtttgttcaaattctgctaaactacagcgatatcgtgccacaattctagtt 36323164  T
Q  116 gtttaactttactttgtactgaatatcggactgcggaacaaaagtgatttattccaattcttccatgctatagcacccactatagccgctatttgacaac 215  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  36323163 atttaactttactttgtactgaatatcggactgcggaacaaaactgatttattccaattcttccatgctatagcac---ttatagccgctatttgacaac 36323067  T
Q  216 acnnnnnnnaagctaaataatatatgtccctgtggagtaaaaccaatatttgacatataagaactatgagagtaacttcaatgccattggaacaaacagg 315  Q
    ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36323066 acttgttttaagctaaataatatatgtccctgtggagtaaaaccaatatttgacatataagaactatgagagtaacttcaatgccattggaacaaacagg 36322967  T
Q  316 gaagaaaattctgaaccctctcctttccctaccc-nnnnnnnnnncatcaagcataaaagttcaagatcacagaaattcataacatctaactccaaccag 414  Q
    |||||||||| |||||||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36322966 gaagaaaattttgaaccctctcctttccctacccaaaaagaaaaacatcaaacataaaagttcaagatcacagaaattcataacatctaactccaaccag 36322867  T
Q  415 aattgcttcagaactaaagtctttttcgttgtatcatatataccgtaaatgcataatgatatcaaagaaaaccgcatactatgcagagtaagtgaataac 514  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36322866 aattgcttctgaactaaagtctttttcgttgtatcaaatataccgtaaatgcataatgatatcaaagaaaaccgcatactatgcagagtaagtgaataac 36322767  T
Q  515 agaacattaccag 527  Q
    |||||||||||||    
T  36322766 agaacattaccag 36322754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 56 - 527
Target Start/End: Complemental strand, 36303209 - 36302742
Alignment:
Q  56 aaaatagtggtttgttcaaattctgctaaactacagcgatatcgtgccacaattctagttgtttaactttactttgtactgaatatcggactgcggaaca 155  Q
    ||||||| ||||||||||||||| |||| | ||||||| ||| |  |||| |||| || | ||| ||   |||||| ||| |||| | ||||||||||||    
T  36303209 aaaatagcggtttgttcaaattccgctatagtacagcgctatagcaccaccattccagctatttgacaacactttgaactaaatagcagactgcggaaca 36303110  T
Q  156 aaagtgatttattccaattcttccatgctatagcacccactatagccgctatttgacaacacnnnnnnnaagctaaataatatatgtccctgtggagtaa 255  Q
    |||| ||| ||||  ||||||||||||||||||| ||| |||||||| ||| || |||||||       |||||||||||  | | | |      |||||    
T  36303109 aaagcgatatatttaaattcttccatgctatagcgcccgctatagccactacttaacaacactggtcttaagctaaataacttctatac------agtaa 36303016  T
Q  256 aaccaatatttgacatataagaactatgagagtaacttcaatgccattggaacaaacagggaagaaaattctgaaccctctcctttccctacccnnnnnn 355  Q
    ||||||||||||| ||||||||||||| |||||||    |||| || |||||  |||||||||| ||||| || ||||||||||||||||||||          
T  36303015 aaccaatatttgatatataagaactatcagagtaatgcaaatgtcaatggaatgaacagggaaggaaattatggaccctctcctttccctacccaaaaag 36302916  T
Q  356 nnnn-catcaagcataaaagttcaagatcacagaaattcataacatctaactccaaccagaattgcttcagaactaaagtctttttcgttgtatcatata 454  Q
         |||||| |||||||||| || ||| || ||||| |||||||| |||||| ||||||||| |||  |||||||||  ||||||||||| ||  |||    
T  36302915 aaaatcatcaaacataaaagttaaacatcgcaaaaatttataacatccaactccgaccagaattacttttgaactaaagattttttcgttgtgtccaata 36302816  T
Q  455 taccgtaaatgcataatgat-atcaaagaaaaccgcatactatgcagagtaagtgaataacagaacattaccag 527  Q
    ||||| | |||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  36302815 taccgcagatgcataatgataatcaaagaaaactacatactatgcagaataagtgaataacagaacattaccag 36302742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 3924119 - 3924164
Alignment:
Q  32 agtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaatt 77  Q
    |||||||||||| |||||| ||| ||||||||||||||||| ||||    
T  3924119 agtgttgtcaattgcagattgtggaaaatagtggtttgttccaatt 3924164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 2082141 - 2082085
Alignment:
Q  33 gtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactac 89  Q
    ||||||||||| | || | ||| ||||||| |||||||||||||||||||| |||||    
T  2082141 gtgttgtcaattgtagctcgtggaaaatagcggtttgttcaaattctgctacactac 2082085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 18171837 - 18171789
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattct 79  Q
    ||||||| |||||| ||||| |||||||||||  |||||||||||||||    
T  18171837 cagtgttatcaatcacagatcgtgaaaaatagcagtttgttcaaattct 18171789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 16184 - 16124
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactacag 91  Q
    ||||||||||||| | |||||||| |||||||||| |||||||||||| |||| |||||||    
T  16184 cagtgttgtcaattgtagatggtggaaaatagtggattgttcaaattccgctacactacag 16124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 31441 - 31381
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactacag 91  Q
    ||||||||||||| | |||||||| |||||||||| |||||||||||| |||| |||||||    
T  31441 cagtgttgtcaattgtagatggtggaaaatagtggattgttcaaattccgctacactacag 31381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 31760 - 31713
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattc 78  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||||||    
T  31760 cagtgttgtcaattgtagatggtggaaaatagtggattgttcaaattc 31713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 27720521 - 27720468
Alignment:
Q  30 gcagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    |||||||||||||| || |||  || ||||||||||||||||||||||||||||    
T  27720521 gcagtgttgtcaattgcggatcatggaaaatagtggtttgttcaaattctgcta 27720468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 20502842 - 20502790
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||| |||||| ||||| ||| |||||| |||||||||||||||| ||||    
T  20502842 cagtgttatcaatcacagatagtggaaaatactggtttgttcaaattccgcta 20502790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 23117277 - 23117329
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||||||| || ||| | | ||||||||||||||||||||||| ||||    
T  23117277 cagtgttgtcaattgcggattgcggaaaatagtggtttgttcaaattccgcta 23117329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34925253 - 34925301
Alignment:
Q  35 gttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||| |||||| ||| |||||||  |||||||||||||||||||    
T  34925253 gttgtcaattgcagatcgtggaaaatagcagtttgttcaaattctgcta 34925301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000008; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 1163404 - 1163343
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactacagc 92  Q
    ||||||||||||| | |||||||| |||||||||| |||||||||||  |||| ||||||||    
T  1163404 cagtgttgtcaattgtagatggtggaaaatagtggattgttcaaatttcgctacactacagc 1163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 1169471 - 1169410
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgctaaactacagc 92  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||||||  ||| ||||||||    
T  1169471 cagtgttgtcaattgtagatggtggaaaatagtggattgttcaaattccactacactacagc 1169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 38766707 - 38766760
Alignment:
Q  28 aagcagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgc 81  Q
    |||||||||||||||| |||||| | | ||||||| ||||||||||||||||||    
T  38766707 aagcagtgttgtcaattgcagatcgcgtaaaatagcggtttgttcaaattctgc 38766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 24098522 - 24098474
Alignment:
Q  34 tgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgct 82  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||||| ||||    
T  24098522 tgttgtcaatcacagattgtggaaaataggggtttgttcaaattatgct 24098474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 28811308 - 28811273
Alignment:
Q  181 tgctatagcacccactatagccgctatttgacaacac 217  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28811308 tgctatagcacc-actatagccgctatttgacaacac 28811273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 29395964 - 29396020
Alignment:
Q  27 taagcagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||||||||||| ||||||    |||||||| |||||||||||||| |||||    
T  29395964 taagcagtgttgtcaattgcagatcacaaaaaatagcggtttgttcaaattttgcta 29396020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 35849470 - 35849514
Alignment:
Q  34 tgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattc 78  Q
    |||||||||| |||||| ||| ||||||| |||||||||||||||    
T  35849470 tgttgtcaattgcagattgtggaaaatagcggtttgttcaaattc 35849514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 19914152 - 19914105
Alignment:
Q  32 agtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattct 79  Q
    |||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  19914152 agtgttgtcaattgcagattgtgataaatagtggtttgttctaattct 19914105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 31582028 - 31582074
Alignment:
Q  32 agtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattc 78  Q
    |||||||| ||||||| || ||| |||||||||||||||||||||||    
T  31582028 agtgttgtgaatcgcaaattgtggaaaatagtggtttgttcaaattc 31582074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31739018 - 31738972
Alignment:
Q  32 agtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattc 78  Q
    |||||||||||| |||||| |||| |||||||||||||||| |||||    
T  31739018 agtgttgtcaattgcagattgtgataaatagtggtttgttctaattc 31738972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 33532410 - 33532461
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||||||||||| | | || ||||||| ||||||||||||||||||||    
T  33532410 cagtgttgtcaatcgcaaacg-tggaaaatagcggtttgttcaaattctgcta 33532461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33178551 - 33178505
Alignment:
Q  32 agtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattc 78  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||||||    
T  33178551 agtgttatcaatcgcagattgtgaaaaataggggtttgttgaaattc 33178505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 10125543 - 10125576
Alignment:
Q  57 aaatagtggtttgttcaaattctgctaaactaca 90  Q
    ||||||||||||||||||||||||||| ||||||    
T  10125543 aaatagtggtttgttcaaattctgctacactaca 10125576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 877773 - 877738
Alignment:
Q  181 tgctatagcacccactatagccgctatttgacaacac 217  Q
    |||||||||||| ||||||||||||||||||||||||    
T  877773 tgctatagcacc-actatagccgctatttgacaacac 877738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 40213811 - 40213859
Alignment:
Q  35 gttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||||||| || ||| |||||||||||||||| ||||| |||||    
T  40213811 gttgtcaatcgcatattgtggaaaatagtggtttgtttaaattttgcta 40213859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 83
Target Start/End: Complemental strand, 8344600 - 8344571
Alignment:
Q  54 gaaaaatagtggtttgttcaaattctgcta 83  Q
    ||||||||||||||||||||||||||||||    
T  8344600 gaaaaatagtggtttgttcaaattctgcta 8344571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 7210566 - 7210610
Alignment:
Q  33 gtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaatt 77  Q
    ||||||||||| |||||| ||| |||||||||||||| |||||||    
T  7210566 gtgttgtcaattgcagattgtggaaaatagtggtttgctcaaatt 7210610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 15707551 - 15707603
Alignment:
Q  31 cagtgttgtcaatcgcagatggtgaaaaatagtggtttgttcaaattctgcta 83  Q
    |||||||||||||| ||||| || ||||||||  |||||||||||||| ||||    
T  15707551 cagtgttgtcaatcacagattgtaaaaaatagcagtttgttcaaattccgcta 15707603  T

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