View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_low_40 (Length: 338)
Name: NF11655_low_40
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_low_40 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 42 - 333
Target Start/End: Original strand, 7800715 - 7801006
Alignment:
| Q |
42 |
ctctttctataacacaagaaacaaaatccttttccaccttgaaactcaaattccatcaccgtttctgcatcttcactatcaagaaagattcacattctgc |
141 |
Q |
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| T |
7800715 |
ctctttctataacacaagaaacaaaatccttttccaccttgaaactcaaattccatcaccgtttctgcatcttcactatcaagaaagattcacattctgc |
7800814 |
T |
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| Q |
142 |
gattcggtgccttctcctttttcctgcacggtaacaacgaattcattttcttcttcaattaacctgtatcaaagttctttcgttcacattgtgattttca |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7800815 |
gattcggtgccttctcctttttcctgcacggtaacaacgaattcattttcttcttcaattaacctgtatcaaagttctttcgttcacattgtgattttca |
7800914 |
T |
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| Q |
242 |
tttgccagggtcgtgaaatcctttatcagcagctttgttccgttgtcatcacgcttgaacaactctcaggttccctctttccctatgcttct |
333 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
7800915 |
tttgccagggtcgtgaaatcctttatcagcagctttgttccgttgtcatcacgcttgaacaactctcaggttccctctttctctatgtttct |
7801006 |
T |
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