View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_low_41 (Length: 338)
Name: NF11655_low_41
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 4198763 - 4199037
Alignment:
| Q |
19 |
tgcatagccttcatctatgtgcaagacgtgaccttaaacaaattcatgttatgttaggtaaagtatttccattttgataaggtataatagacaataaata |
118 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
4198763 |
tgcatagccttcatctatgtgcaagacgtgacactaaacaaattcatgttatgttaggtaaagtatttccattttgataaggtgtaatagacaataaata |
4198862 |
T |
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| Q |
119 |
aattgaggggcattgttgtttgattacatattttattgcaagaaataattgtggttgtcttttcattcatcaagattgaagtcaaaccaaatttgaaata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4198863 |
aattgaggggcattgttgtttgattacatattttattgcaagaaataattgtggttgtcttttcattcatcaagattgaagtcaaaccaaatttgaaata |
4198962 |
T |
|
| Q |
219 |
aatgagatgaattctaaacatcccatcaaacaaatgttgcagttaaatggtgacaaccttagtctagaccaaggt |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
4198963 |
aatgagatgaattctaaacatcccatcaaacaaatgttgcagttaaatggtgacaaccttggtctagaccaaggt |
4199037 |
T |
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