View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_low_56 (Length: 266)
Name: NF11655_low_56
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_low_56 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 42087095 - 42086848
Alignment:
| Q |
1 |
cacagaagatggtggttcaggaaatggatacaacaatagcaggtttgaagaaacaaagccaaggttttcaaatgagggtttggaggataaagtggtaatt |
100 |
Q |
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| T |
42087095 |
cacagaagatggtggttcaagaaatggatacaacaatagcaggtttgaagaaacaaagcaaaggttttcaaatgagggtttggaggataaagtggtaatt |
42086996 |
T |
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| Q |
101 |
tattcagatgatcaaaatgaaagaagcacaacatggacagagaaagttgaggacagaggaaatcaacttttaagaaatgatgatcatgcagaaattccct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42086995 |
tattcagatgatcaaaatgaaagaagcacaacatggacagagaaagttgaggacagaggaaatcaacttttaagaaatgatgatcatgcagaaattccct |
42086896 |
T |
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| Q |
201 |
tgacaacaacacttgaaaaatggtacaatgttgatccatgtggtatgt |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42086895 |
tgacaacaacacttgaaaaatggtacaatgttgatccatgtggtatgt |
42086848 |
T |
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