View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_low_73 (Length: 239)
Name: NF11655_low_73
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_low_73 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 21844011 - 21843790
Alignment:
| Q |
1 |
caaaactaagggaatccaaagtcaccaatctacgtggatttgggtcctatgacttttattgtttgcccgttactccaaggcaaagtagaaagtgaccaac |
100 |
Q |
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| T |
21844011 |
caaaactaagggaatccaaagtcaccaatctacgtggatttgggtcatatgacttttattgtttgcccgttactccaaggcaaagtagaaagtgaccaac |
21843912 |
T |
|
| Q |
101 |
ttcataaagcatctaataaaacatacnnnnnnnaccttcttgacaacgctatcaaatatacaaccacatgtatagaaaatagaaaactacagttcaaact |
200 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
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| T |
21843911 |
ttcataaagcatctaataaaacatactttttttaccttcttgacaacgctatcaaatatacaagcacatgtatagaaaatggaaaactacagttcaaact |
21843812 |
T |
|
| Q |
201 |
agctttccaaattaaccaatat |
222 |
Q |
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|
|||||||||||||||||||||| |
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| T |
21843811 |
agctttccaaattaaccaatat |
21843790 |
T |
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