View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11655_low_83 (Length: 218)
Name: NF11655_low_83
Description: NF11655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11655_low_83 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18910515 - 18910710
Alignment:
| Q |
1 |
atggcaccataatcaaatggagtaacaaaacttacaaatcttctatatttcctcaaatgggctatactaggctccaattaataggtacacacatggactt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
18910515 |
atggcaccataatcaaatggagtaacaaaacttacaattcttctatatttcctcaaatgggcta----aggctccaattaataggtacacacatggactt |
18910610 |
T |
|
| Q |
101 |
gtatcatattcctaaattaagtaaacatgccatcaactaaaaacaaacaaggtgaatactctcataccctagagttttgttaggtacatacccatcatcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18910611 |
gtatcatattcctaaattaagtaaacatgccatcaactaaaaacaaacaaggtgaatactctcataccctagagttttgttaggtacatacccatcatcc |
18910710 |
T |
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