View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11656_low_6 (Length: 490)

Name: NF11656_low_6
Description: NF11656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11656_low_6
NF11656_low_6
[»] chr8 (25 HSPs)
chr8 (18-477)||(4630161-4630618)
chr8 (301-477)||(19176659-19176841)
chr8 (311-477)||(13224645-13224816)
chr8 (310-477)||(12571866-12572040)
chr8 (310-474)||(41681137-41681306)
chr8 (308-477)||(33328159-33328334)
chr8 (310-477)||(9930026-9930199)
chr8 (310-477)||(31133223-31133396)
chr8 (310-477)||(44831614-44831787)
chr8 (310-475)||(11656458-11656630)
chr8 (310-477)||(9178005-9178177)
chr8 (397-475)||(33743290-33743368)
chr8 (310-461)||(13225023-13225181)
chr8 (310-461)||(44831250-44831408)
chr8 (310-460)||(31133605-31133762)
chr8 (310-397)||(9928912-9928999)
chr8 (310-397)||(11336977-11337064)
chr8 (310-397)||(19176293-19176380)
chr8 (308-427)||(12572270-12572395)
chr8 (310-427)||(11656876-11656999)
chr8 (310-427)||(34540967-34541090)
chr8 (303-439)||(10918122-10918264)
chr8 (310-397)||(41681589-41681676)
chr8 (310-461)||(33742925-33743082)
chr8 (397-439)||(43958281-43958323)
[»] chr7 (26 HSPs)
chr7 (310-477)||(19590528-19590701)
chr7 (308-477)||(19830421-19830596)
chr7 (310-477)||(37786770-37786943)
chr7 (308-477)||(29100220-29100395)
chr7 (308-477)||(4641441-4641616)
chr7 (310-475)||(35289272-35289443)
chr7 (310-477)||(38858646-38858819)
chr7 (310-475)||(2659211-2659382)
chr7 (308-470)||(4478076-4478244)
chr7 (310-475)||(32004985-32005156)
chr7 (310-475)||(34534162-34534333)
chr7 (313-470)||(23953105-23953268)
chr7 (310-443)||(28583442-28583581)
chr7 (310-461)||(19590909-19591067)
chr7 (310-461)||(38859025-38859183)
chr7 (310-460)||(32004617-32004774)
chr7 (301-439)||(38160945-38161089)
chr7 (310-439)||(28584329-28584464)
chr7 (310-461)||(34533794-34533952)
chr7 (310-397)||(35288906-35288993)
chr7 (310-459)||(37787153-37787309)
chr7 (310-461)||(2658842-2659000)
chr7 (310-397)||(19830874-19830961)
chr7 (310-397)||(4641899-4641983)
chr7 (310-397)||(23952733-23952821)
chr7 (320-427)||(29099863-29099976)
[»] chr3 (47 HSPs)
chr3 (308-477)||(5136981-5137156)
chr3 (310-477)||(23644465-23644638)
chr3 (310-477)||(24300925-24301098)
chr3 (310-477)||(25853596-25853769)
chr3 (310-477)||(39555946-39556119)
chr3 (310-475)||(20840563-20840734)
chr3 (308-477)||(41046701-41046876)
chr3 (310-477)||(27393946-27394119)
chr3 (310-477)||(31779021-31779194)
chr3 (310-477)||(30104485-30104657)
chr3 (310-477)||(37726932-37727105)
chr3 (313-456)||(48452995-48453144)
chr3 (310-470)||(43973444-43973610)
chr3 (310-475)||(32535330-32535505)
chr3 (301-477)||(26274936-26275117)
chr3 (310-477)||(26837725-26837897)
chr3 (311-477)||(22425182-22425354)
chr3 (310-477)||(17464860-17465034)
chr3 (308-439)||(25612384-25612521)
chr3 (308-427)||(32534960-32535085)
chr3 (310-461)||(20840945-20841103)
chr3 (310-461)||(37727314-37727472)
chr3 (310-445)||(25420542-25420683)
chr3 (310-461)||(27393664-27393822)
chr3 (310-461)||(39555581-39555739)
chr3 (310-461)||(43973824-43973982)
chr3 (301-463)||(29801798-29801967)
chr3 (310-427)||(23644884-23645007)
chr3 (310-461)||(4275748-4275906)
chr3 (310-461)||(22424817-22424975)
chr3 (310-397)||(25853237-25853324)
chr3 (310-461)||(31778656-31778814)
chr3 (308-397)||(26274568-26274657)
chr3 (308-461)||(41047083-41047241)
chr3 (417-477)||(29801532-29801592)
chr3 (310-393)||(29801359-29801442)
chr3 (310-377)||(51473431-51473498)
chr3 (308-397)||(24300558-24300646)
chr3 (308-461)||(26837361-26837521)
chr3 (310-427)||(17464494-17464617)
chr3 (310-439)||(50116816-50116951)
chr3 (310-377)||(37222046-37222113)
chr3 (431-478)||(49407925-49407972)
chr3 (431-477)||(55192247-55192293)
chr3 (310-427)||(30098182-30098305)
chr3 (310-397)||(5137436-5137523)
chr3 (431-477)||(37075818-37075864)
[»] chr1 (38 HSPs)
chr1 (310-470)||(5540194-5540360)
chr1 (310-470)||(29306956-29307122)
chr1 (310-477)||(50970647-50970820)
chr1 (310-477)||(18984122-18984295)
chr1 (308-477)||(5962947-5963122)
chr1 (310-477)||(29869623-29869796)
chr1 (308-477)||(15173097-15173272)
chr1 (310-477)||(21856412-21856585)
chr1 (310-477)||(33144288-33144461)
chr1 (138-247)||(48513199-48513303)
chr1 (310-470)||(15646571-15646737)
chr1 (310-477)||(8678911-8679083)
chr1 (310-477)||(17433219-17433392)
chr1 (310-475)||(26859431-26859601)
chr1 (310-477)||(9018976-9019149)
chr1 (310-477)||(39154022-39154195)
chr1 (310-470)||(29307317-29307484)
chr1 (397-475)||(4636068-4636146)
chr1 (305-397)||(5539814-5539906)
chr1 (310-461)||(21856045-21856203)
chr1 (310-427)||(18984538-18984661)
chr1 (75-136)||(48513114-48513173)
chr1 (310-463)||(17433597-17433757)
chr1 (310-459)||(50970281-50970437)
chr1 (305-397)||(8678539-8678631)
chr1 (310-427)||(29870038-29870161)
chr1 (310-439)||(52268293-52268428)
chr1 (315-397)||(33143925-33144007)
chr1 (310-427)||(39154439-39154562)
chr1 (310-397)||(4636426-4636513)
chr1 (310-461)||(15173478-15173635)
chr1 (310-461)||(15646195-15646353)
chr1 (310-397)||(26859062-26859149)
chr1 (310-470)||(9019338-9019505)
chr1 (25-66)||(48513039-48513080)
chr1 (310-358)||(47826967-47827015)
chr1 (310-393)||(2733416-2733499)
chr1 (437-477)||(17088286-17088326)
[»] chr2 (35 HSPs)
chr2 (310-477)||(239356-239528)
chr2 (308-475)||(11090522-11090695)
chr2 (310-477)||(18451200-18451373)
chr2 (310-477)||(40027143-40027316)
chr2 (310-477)||(43058336-43058509)
chr2 (303-477)||(40815714-40815894)
chr2 (310-477)||(22374323-22374496)
chr2 (309-470)||(8425736-8425903)
chr2 (310-477)||(1978111-1978284)
chr2 (308-474)||(14432143-14432315)
chr2 (308-477)||(3025467-3025641)
chr2 (310-477)||(26538100-26538273)
chr2 (310-475)||(28616616-28616788)
chr2 (310-470)||(26538454-26538621)
chr2 (310-475)||(7446345-7446519)
chr2 (310-439)||(35781070-35781205)
chr2 (310-461)||(22374709-22374867)
chr2 (301-461)||(43058717-43058883)
chr2 (310-439)||(20444752-20444887)
chr2 (310-397)||(1978564-1978651)
chr2 (310-461)||(7446730-7446888)
chr2 (308-427)||(40027559-40027684)
chr2 (310-439)||(35779711-35779846)
chr2 (309-460)||(8425357-8425514)
chr2 (314-397)||(239807-239890)
chr2 (310-397)||(11090975-11091062)
chr2 (310-397)||(18450833-18450920)
chr2 (310-397)||(28617069-28617156)
chr2 (310-461)||(40815348-40815506)
chr2 (310-439)||(15551502-15551637)
chr2 (310-461)||(14432525-14432683)
chr2 (310-397)||(28847150-28847237)
chr2 (310-460)||(3025848-3026003)
chr2 (310-439)||(20440439-20440573)
chr2 (431-477)||(28143400-28143446)
[»] scaffold0295 (2 HSPs)
scaffold0295 (310-477)||(4796-4969)
scaffold0295 (310-397)||(5246-5333)
[»] chr6 (32 HSPs)
chr6 (310-477)||(10900299-10900472)
chr6 (310-477)||(20741103-20741276)
chr6 (310-477)||(11276951-11277124)
chr6 (310-477)||(18257140-18257313)
chr6 (310-477)||(15828010-15828183)
chr6 (310-475)||(12935528-12935699)
chr6 (310-477)||(23074002-23074164)
chr6 (301-477)||(28472631-28472812)
chr6 (301-477)||(29859820-29860001)
chr6 (310-477)||(11444990-11445163)
chr6 (303-477)||(31470685-31470865)
chr6 (308-477)||(2322588-2322762)
chr6 (310-475)||(1149802-1149974)
chr6 (310-477)||(18505288-18505461)
chr6 (309-470)||(10899941-10900109)
chr6 (310-461)||(2319675-2319832)
chr6 (310-461)||(11445371-11445529)
chr6 (310-461)||(12935160-12935318)
chr6 (310-461)||(23075512-23075670)
chr6 (310-464)||(4811375-4811535)
chr6 (310-461)||(31470318-31470476)
chr6 (308-397)||(18504920-18505009)
chr6 (310-397)||(22219808-22219895)
chr6 (310-395)||(1149468-1149553)
chr6 (310-439)||(29033437-29033573)
chr6 (310-427)||(4811675-4811798)
chr6 (308-437)||(3835135-3835270)
chr6 (310-398)||(18257591-18257679)
chr6 (310-397)||(20741559-20741646)
chr6 (310-374)||(15827641-15827705)
chr6 (397-470)||(11276686-11276760)
chr6 (431-476)||(35163557-35163602)
[»] chr5 (36 HSPs)
chr5 (310-477)||(2865124-2865297)
chr5 (310-477)||(8460933-8461106)
chr5 (310-477)||(8647441-8647614)
chr5 (310-477)||(18183338-18183511)
chr5 (310-477)||(5819298-5819471)
chr5 (310-477)||(19359139-19359312)
chr5 (310-477)||(24362205-24362378)
chr5 (310-477)||(164560-164733)
chr5 (310-477)||(15708974-15709146)
chr5 (310-477)||(29455111-29455284)
chr5 (310-477)||(16018592-16018763)
chr5 (303-477)||(15372242-15372422)
chr5 (310-473)||(14215616-14215785)
chr5 (310-477)||(24331929-24332106)
chr5 (308-461)||(18182971-18183131)
chr5 (326-477)||(25000109-25000266)
chr5 (310-439)||(7349424-7349559)
chr5 (308-461)||(5818930-5819090)
chr5 (310-463)||(25000471-25000631)
chr5 (310-466)||(14463901-14464062)
chr5 (310-397)||(19359591-19359678)
chr5 (310-461)||(24331562-24331722)
chr5 (397-461)||(24361933-24361997)
chr5 (310-461)||(2864757-2864915)
chr5 (310-397)||(4623151-4623238)
chr5 (310-397)||(8461386-8461473)
chr5 (310-397)||(8647893-8647980)
chr5 (308-463)||(16018969-16019131)
chr5 (310-443)||(4219666-4219804)
chr5 (397-461)||(24325308-24325372)
chr5 (310-397)||(15371874-15371960)
chr5 (310-397)||(29454743-29454830)
chr5 (310-460)||(164194-164350)
chr5 (310-377)||(4222197-4222264)
chr5 (418-477)||(24325580-24325639)
chr5 (341-439)||(4624632-4624736)
[»] chr4 (53 HSPs)
chr4 (310-477)||(15523603-15523776)
chr4 (310-477)||(46193774-46193947)
chr4 (310-477)||(33109687-33109860)
chr4 (310-477)||(4219560-4219733)
chr4 (310-477)||(11153516-11153689)
chr4 (310-471)||(25447611-25447778)
chr4 (310-477)||(22170306-22170478)
chr4 (302-477)||(22434547-22434726)
chr4 (310-470)||(38962195-38962361)
chr4 (310-477)||(12234332-12234505)
chr4 (310-477)||(25937673-25937846)
chr4 (310-477)||(23494446-23494619)
chr4 (310-477)||(48526199-48526371)
chr4 (310-477)||(51020800-51020973)
chr4 (308-477)||(2118665-2118839)
chr4 (308-477)||(54995437-54995611)
chr4 (397-477)||(12503805-12503885)
chr4 (308-477)||(45082433-45082606)
chr4 (310-463)||(46193408-46193568)
chr4 (412-477)||(18751971-18752036)
chr4 (310-439)||(48293597-48293732)
chr4 (310-397)||(25938126-25938213)
chr4 (310-427)||(51021215-51021337)
chr4 (310-398)||(15523238-15523326)
chr4 (310-461)||(22434182-22434340)
chr4 (310-397)||(23494898-23494985)
chr4 (310-461)||(25447250-25447408)
chr4 (308-461)||(48526565-48526725)
chr4 (308-461)||(54995070-54995230)
chr4 (310-427)||(2118296-2118419)
chr4 (310-461)||(11153149-11153307)
chr4 (310-461)||(12234713-12234871)
chr4 (310-461)||(45082808-45082966)
chr4 (303-461)||(4219943-4220108)
chr4 (329-442)||(43281195-43281313)
chr4 (310-427)||(33109883-33110006)
chr4 (310-439)||(44892555-44892690)
chr4 (310-377)||(18763995-18764062)
chr4 (308-439)||(48713753-48713890)
chr4 (308-461)||(18751600-18751760)
chr4 (310-439)||(48294949-48295085)
chr4 (308-437)||(16690937-16691072)
chr4 (310-461)||(20470895-20471053)
chr4 (310-357)||(35363096-35363143)
chr4 (310-376)||(10258363-10258429)
chr4 (310-379)||(16318249-16318318)
chr4 (441-477)||(17504329-17504365)
chr4 (310-439)||(20958268-20958401)
chr4 (441-477)||(35193447-35193483)
chr4 (447-477)||(17504119-17504149)
chr4 (447-477)||(40160239-40160269)
chr4 (397-439)||(44890613-44890655)
chr4 (397-442)||(20957285-20957330)
[»] scaffold0273 (1 HSPs)
scaffold0273 (310-477)||(4576-4749)
[»] scaffold1223 (2 HSPs)
scaffold1223 (310-477)||(756-928)
scaffold1223 (310-470)||(1116-1283)
[»] scaffold0951 (2 HSPs)
scaffold0951 (310-475)||(1670-1841)
scaffold0951 (310-461)||(2051-2209)
[»] scaffold0019 (1 HSPs)
scaffold0019 (301-477)||(134042-134224)
[»] scaffold0007 (3 HSPs)
scaffold0007 (310-477)||(64305-64478)
scaffold0007 (308-397)||(64760-64849)
scaffold0007 (431-477)||(205738-205784)
[»] scaffold0432 (1 HSPs)
scaffold0432 (310-477)||(10242-10414)
[»] scaffold0417 (2 HSPs)
scaffold0417 (329-477)||(10643-10797)
scaffold0417 (310-427)||(11042-11165)
[»] scaffold0157 (1 HSPs)
scaffold0157 (397-477)||(16592-16672)
[»] scaffold0027 (2 HSPs)
scaffold0027 (301-477)||(42528-42709)
scaffold0027 (308-470)||(42170-42339)
[»] scaffold0176 (2 HSPs)
scaffold0176 (313-468)||(18841-19001)
scaffold0176 (310-397)||(19076-19163)
[»] scaffold1585 (1 HSPs)
scaffold1585 (310-397)||(570-657)
[»] scaffold0057 (2 HSPs)
scaffold0057 (308-360)||(61950-62002)
scaffold0057 (310-361)||(61031-61082)
[»] scaffold0113 (1 HSPs)
scaffold0113 (311-427)||(28662-28784)
[»] scaffold0168 (1 HSPs)
scaffold0168 (397-439)||(7695-7737)
[»] scaffold0076 (1 HSPs)
scaffold0076 (308-397)||(8464-8553)


Alignment Details
Target: chr8 (Bit Score: 433; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 18 - 477
Target Start/End: Complemental strand, 4630618 - 4630161
Alignment:
Q  18 attattaccttactgaaaatgttgacattgagcaaagtcttgtttgtgatgacatagtaagattataattgtgtatgagcgttatttcagggggacggag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4630618 attattaccttactgaaaatgttgacattgagcaaagtcttgtttgtgatgacatagtgagattataattgtgtatgagcgttatttcagggggacggag 4630519  T
Q  118 ataacaatgtcaatgtcaacgaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttgtgttggatgcaccttacacgtggcacgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4630518 ataacaatgtcaatgtcaacgaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttgtgttggatgcaccttacacgtggcacgt 4630419  T
Q  218 agtaacggtgctgatttttggtcacctgctgcgaacaatgtttcaccctcaactattgctaagcagtagtataaattaatgagtatttatgtttaattac 317  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4630418 agtaacggtgctgatttttggtcacctgct--gaacaatgtttcaccctcaactattgctaagcagtagtataaattaatgagtatttatgtttaattac 4630321  T
Q  318 acttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattattgttgcatttttcatcctac 417  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4630320 acttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattattgttgcatttttcatcctac 4630221  T
Q  418 cccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4630220 cccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 19176841 - 19176659
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 397  Q
    |||||| | ||||||||||||||| || ||||||||||| ||||||||| || ||||||||   ||||||||||||| | ||| |||||||||||||       
T  19176841 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19176742  T
Q  398 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
       ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  19176741 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 311 - 477
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  311 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgca 404  Q
    |||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | |||| ||||||||||||      ||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  405 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 12571866 - 12572040
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| ||    ||||||||||||| | ||| ||| |||||||||      ||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  404 atttttcatccta-ccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12571966 atttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 474
Target Start/End: Original strand, 41681137 - 41681306
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctat 474  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| || ||||||||||    
T  41681237 atttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 33328159 - 33328334
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| ||||||||| |||      ||||    
T  33328159 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 33328258  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||| | ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  33328259 gcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 9930199 - 9930026
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||||||   |||||||| |||| | ||  ||||||||| |||      ||||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||    
T  9930099 atttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 31133223 - 31133396
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||||||| |||||| |   |||||||||| || | ||||||||||||| |||      ||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| | ||||||    
T  31133323 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 44831787 - 44831614
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||| ||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||  |||||||||      ||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  44831687 atttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 11656458 - 11656630
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||| ||| | ||| ||||||||||||      |||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  404 atttttcatcctaccccccattttattctcc-aaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||| ||||    
T  11656558 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 9178177 - 9178005
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || || ||   | ||||||||||| | ||| ||||||||| |||      ||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||    
T  9178077 atttttcatcttaccccc-attttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 33743368 - 33743290
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  33743368 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 13225181 - 13225023
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  13225181 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 13225082  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  13225081 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 44831250 - 44831408
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||| ||||      |||||||    
T  44831250 ttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 44831349  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  44831350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 460
Target Start/End: Complemental strand, 31133762 - 31133605
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 460  Q
    ||||||| || |||| || ||||| |  ||||| ||||||||| ||||||| ||||||    
T  31133662 atttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 9928912 - 9928999
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 9928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 11337064 - 11336977
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || |||||||||||  |||||||||||||||||| |   ||||||||||||||| ||| ||| |||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattat 11336977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 19176293 - 19176380
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 19176380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 12572395 - 12572270
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  12572395 gtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgtt 12572296  T
Q  402 gcatttttcatcctaccccccatttt 427  Q
    ||||||||| ||||||| || |||||    
T  12572295 gcatttttcgtcctacctcctatttt 12572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 11656999 - 11656876
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||| |   ||||||||||||| | ||  ||||||||||||      |||||||    
T  11656999 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 11656900  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  11656899 atttttcgtcctacctcctatttt 11656876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 34541090 - 34540967
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||  ||||||||||||      |||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  34540990 atttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 439
Target Start/End: Original strand, 10918122 - 10918264
Alignment:
Q  303 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 397  Q
    |||| ||||||||||| ||||  || ||||||||||  |||||||||||||||||| ||  |  ||||||||||  | ||  ||||||||| |||         
T  10918122 tttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattt 10918221  T
Q  398 -tgttgcatttttcatcctaccccccattttattctccaaaaa 439  Q
     |||||||||||||||| ||||||||||||||| |||||||||    
T  10918222 ttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 41681676 - 41681589
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||    ||||||||||||| | ||| |||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattat 41681589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 33742925 - 33743082
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||| ||   ||||||||||||| | ||| ||| ||||||||      ||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaaca-aacggtctttcaattatcatttttgatgc 33743023  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| || | ||| ||| ||||| |||||||||||||||    
T  33743024 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 43958281 - 43958323
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaa 439  Q
    |||||||||||||| |||||||| | |||||||||||||||||    
T  43958281 ttgttgcatttttcgtcctaccctctattttattctccaaaaa 43958323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 19590528 - 19590701
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  19590628 atttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 19830421 - 19830596
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  19830421 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 19830520  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  19830521 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 37786770 - 37786943
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   |||||||||| || | ||| |||||||||||||      ||||||    
T  37786770 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37786869  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  37786870 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 29100395 - 29100220
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||| ||||||||||||   ||||||||||||| | ||| ||| |||||||||      ||||    
T  29100395 gtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 29100296  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  29100295 gcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 4641441 - 4641616
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || |||||||||||  ||||||||||| ||||||||   |||| ||||| || | ||| ||| |||||||||      ||||    
T  4641441 gtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgtt 4641540  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4641541 gcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 35289443 - 35289272
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      | |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| || ||||||||||||||||||| ||||| ||||| |||| | ||||||||||||||||||||||    
T  35289343 atttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 38858646 - 38858819
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||| ||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  38858646 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 38858745  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  38858746 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 2659382 - 2659211
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||| ||||||| ||| ||| |||| ||||| ||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2659283  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  2659282 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 470
Target Start/End: Complemental strand, 4478244 - 4478076
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||   |||||||||||||||  |  |||||||||||||      ||||    
T  4478244 gtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgtt 4478145  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||||| || || ||| |||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  4478144 gcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 32005156 - 32004985
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || || ||||||||  ||||||||||| ||||| ||   |||||||| |||| | ||| |||||| ||||||      ||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  32005056 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 34534333 - 34534162
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||| ||||||| |  ||||||||||| |||||||||||| || |||||    |||||||||||| | ||| |||||||||||||      ||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||    
T  34534233 atttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 470
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  313 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatt 406  Q
    |||||| ||||| || ||||||||||  |||||||||||| |||||| |   ||| ||||||||| | ||| |||||||||||||      |||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  407 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    |||| || ||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 28583442 - 28583581
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||| || |||||| |||   |||||||||| |||| ||| ||||||||||||      || ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgca 443  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  28583542 atttttcgtcctaccccccattttatcctccaaaaatgca 28583581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 19591067 - 19590909
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  19590967 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 38859183 - 38859025
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||| ||||      |||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  38859083 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 460
Target Start/End: Original strand, 32004617 - 32004774
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| |||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 32004716  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 460  Q
    |||||||  |||||| || ||||| |  ||||| ||| ||||| ||||||||||||||    
T  32004717 atttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 38160945 - 38161089
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 396  Q
    |||||| | ||||||||||||||| || ||| ||||||| |||||||||||| |  |||||   ||||||||||||| | ||  ||||||||||||        
T  38160945 tatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattat 38161044  T
Q  397 --ttgttgcatttttcatcctaccccccattttattctccaaaaa 439  Q
      |||||||||||||| |||||| ||||||||||| |||||||||    
T  38161045 ttttgttgcatttttcgtcctactccccattttatcctccaaaaa 38161089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 28584464 - 28584329
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||  || ||||| ||||| ||| |||||||||||||| |||  ||||||||||||| | ||  ||||||||||||      ||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||| || ||||||||||||||| |||||||||    
T  28584364 atttttcgtcttaccccccattttatcctccaaaaa 28584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 34533794 - 34533952
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||||| ||  ||| ||||||||      |||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||| | ||||||| || ||||| |  ||||||||| ||||| |||||||| ||||||    
T  34533894 attttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 35288906 - 35288993
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| ||||||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattat 35288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 459
Target Start/End: Complemental strand, 37787309 - 37787153
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| || |||||||||      |||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttt 459  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||    
T  37787209 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 2658842 - 2659000
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||  || ||||||||||| |||||||||||| ||||||||   |||||||| |||| | ||  ||||||||||||      |||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| || |||| || ||||| |  ||||||||| ||||| ||||| |||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 19830961 - 19830874
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| |||||||||  |||||||||| || | ||| || ||||||||||    
T  19830961 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattat 19830874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 4641983 - 4641899
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| ||||||||   | |||||||||  ||||||||||||| | ||| |||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattat 4641899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 23952733 - 23952821
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggc-tactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||  | ||||||||||||||||| ||   ||||||||||||| | ||| |||||||||||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattat 23952821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  320 ttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgcatttttcatc 413  Q
    ||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| ||||||||||||      |||||||||||||| ||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  414 ctaccccccatttt 427  Q
    ||||| || |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 5136981 - 5137156
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| | |||||||||||||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  5136981 gtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5137080  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  5137081 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 23644465 - 23644638
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||| |||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||      ||||||    
T  23644465 ttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgc 23644564  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  23644565 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 24301098 - 24300925
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||||||| || | ||| ||||||| | |||      ||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  24300998 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 25853769 - 25853596
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||||||||||| ||||||||||  |||||||||||| ||||| |||  ||||||||||||| | ||  |||||||||||||      ||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  25853669 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 39556119 - 39555946
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||       |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39556019 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 20840563 - 20840734
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||  ||||||||| |||| | ||| |||||||||||||      ||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| |||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  20840663 atttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 41046701 - 41046876
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| ||| | |||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  41046701 gtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 41046800  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  41046801 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 27394119 - 27393946
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||||||||| |||||||  |||||||||||||| | |||  ||||||||||||      ||||||    
T  27394119 ttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 27394020  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| |||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||    
T  27394019 attttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 31779194 - 31779021
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||    
T  31779094 atttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 30104485 - 30104657
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||||   |||||||||| |||| ||| |||||||||||||      ||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||    
T  30104585 atttttcgtcctacccc-cattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 37726932 - 37727105
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| || || |||||| |||| |||   |||||||||| || | ||| |||||||||||||      ||||||    
T  37726932 ttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37727031  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  37727032 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 313 - 456
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  313 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgcatt 406  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  407 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagt 456  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 43973444 - 43973610
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||||||| || |  ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  43973544 atttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 32535505 - 32535330
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----------t 398  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||           |    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  399 gttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  32535405 gttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 26275117 - 26274936
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 397  Q
    |||||| ||||||||| | |||||  | | ||||||||  |||||||||||| |||||||    ||||||||||||||| ||| |||| ||||||||       
T  26275117 tatttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcat 26275018  T
Q  398 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
       |||||| |||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  26275017 ttttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 26837897 - 26837725
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| |||| |||   ||| |||| |||| | ||| ||| ||||| |||      ||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  26837798 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 477
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  311 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgca 404  Q
    |||||||||||||| || |||||||| || |||||||||||  ||||| ||   || |||||||||| | ||| || ||||||||||      |||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  405 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 17465034 - 17464860
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||| |||| || |||| |||||      |||||||| |||| | ||| |||||||||||||      ||||||    
T  17465034 ttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 17464935  T
Q  404 atttttca-tcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17464934 atttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 25612521 - 25612384
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||||||||   |||||||| |||| | ||| ||| || |||||      |||||    
T  25612521 gtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgtt 25612422  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  25612421 gcatttttcgtcctaccccccattttatcctccaaaaa 25612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 32534960 - 32535085
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || |||||||||||  ||||||||||||||||||||  |||||||||||||| | ||| ||||||||||||      |||||    
T  32534960 gtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 32535059  T
Q  402 gcatttttcatcctaccccccatttt 427  Q
    ||||||||| ||||||| || |||||    
T  32535060 gcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 20841103 - 20840945
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| ||||||||||||      |||||||    
T  20841103 ttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 20841004  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  20841003 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 37727472 - 37727314
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 445
Target Start/End: Complemental strand, 25420683 - 25420542
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| ||  |   |||||||| |||||| ||  ||||||||||||      |||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcaga 445  Q
    ||||||| || ||||||||||||||| || ||||||||||||    
T  25420583 atttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 27393664 - 27393822
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||| ||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  27393664 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 27393763  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| |||||||||| ||||| |  | ||| ||| ||||| |||||||||||||||    
T  27393764 atttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 39555581 - 39555739
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  39555581 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 39555680  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| | ||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  39555681 atttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 43973982 - 43973824
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| |||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| || | ||| ||| ||||| |||||||||||||||    
T  43973882 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 29801967 - 29801798
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 396  Q
    |||||| | |||||||||||||||||| |||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| ||||||||        
T  29801967 tatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat 29801868  T
Q  397 --ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 463  Q
      |||||||||||||| ||| ||| || ||||| |  ||||| ||| ||||| |||||||| ||||||||    
T  29801867 ttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 23645007 - 23644884
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||||||||    ||||||||||||| | ||| ||| ||||||||      |||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||||||||||| || |||||    
T  23644907 atttttcatcctacctcctatttt 23644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 4275906 - 4275748
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||| |||||      |||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  4275806 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 22424817 - 22424975
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| |  ||||||||  | ||||| |||||| |||| ||||  ||||||||||||| | ||| ||||||||||||      |||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22424916  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| |||||||||||||||    
T  22424917 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 25853237 - 25853324
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||| ||   |||||||| |||| | ||| |||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattat 25853324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 31778656 - 31778814
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttc------aattattgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| |||||||       ||| |||||||    
T  31778656 ttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgc 31778755  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  31778756 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 26274568 - 26274657
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||| |||||||| | || |||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  26274568 gtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 26274657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 461
Target Start/End: Complemental strand, 41047241 - 41047083
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||| | || || |||||||| |||||||||||| |||| ||||  ||||||||||||||| ||| ||||||||||||      |||||    
T  41047241 gtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgtt 41047144  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  41047143 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  417 ccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 29801359 - 29801442
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaa 393  Q
    ||||||||||||||| ||||||||||||||  ||||||| ||| ||||||||   ||||||||||||| | ||| |||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 29801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 377
Target Start/End: Original strand, 51473431 - 51473498
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 377  Q
    ||||||||||||||| || ||||||||||| ||| |||||||||||||||||   |||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaa 51473498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 24300558 - 24300646
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||| ||||| || |||||||||||  || |||||||| |||||||||  ||||||||||||||| ||| || ||||||||||    
T  24300558 gtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattat 24300646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 26837361 - 26837521
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||| ||||| || | || |||||| |||||||||||||||||||||   ||||| |||| ||   ||| ||||||||||||      |||||    
T  26837361 gtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgtt 26837460  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  26837461 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 427
Target Start/End: Original strand, 17464494 - 17464617
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||| || ||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  17464594 atttttcgtcctacctcctatttt 17464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 50116951 - 50116816
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    |||||||||||||||||| ||||||||||   ||||||||||||||||| ||   |||| ||| |||| | ||| ||| ||||      ||| |||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    | ||||| |||||||||||||||| | |||||||||    
T  50116851 aattttcgtcctaccccccattttttcctccaaaaa 50116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 377
Target Start/End: Complemental strand, 37222113 - 37222046
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 377  Q
    ||||||||||||||| || ||||||||||  |||||||| ||||||||||||   |||||||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaa 37222046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 478
Target Start/End: Original strand, 49407925 - 49407972
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgcta 478  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 477
Target Start/End: Original strand, 55192247 - 55192293
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  55192247 ctccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 30098305 - 30098182
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||   ||||||||||| ||||| ||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  30098305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 30098206  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  30098205 atttttcgtcctacctcctatttt 30098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 5137523 - 5137436
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| |||| |||   |||||||| |||| | ||  |||||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattat 5137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 431 - 477
Target Start/End: Original strand, 37075818 - 37075864
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||    
T  37075818 ctccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 5540360 - 5540194
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | ||| |||||||||||||      ||||||    
T  5540360 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgc 5540261  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5540260 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 29306956 - 29307122
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||||||||| | ||| |||||||||||||      ||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29307056 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 50970820 - 50970647
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  50970820 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 50970721  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  50970720 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 18984122 - 18984295
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  18984222 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 5963122 - 5962947
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   |||||||| |||| | ||||||| |||||||||      ||||    
T  5963122 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgtt 5963023  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  5963022 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 29869623 - 29869796
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||||      |||||    
T  29869623 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 29869722  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  29869723 atttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 15173097 - 15173272
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||  ||| | ||| || ||||||||||      ||||    
T  15173097 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgtt 15173196  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15173197 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 21856585 - 21856412
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||| ||||||||| |||      || |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  21856485 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 33144461 - 33144288
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  | ||||||| |||      ||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  33144361 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 48513199 - 48513303
Alignment:
Q  138 gaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttgtgttggatgcaccttacacgtggcacgtagtaacggtgctgatttttg 237  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||||||    
T  48513199 gaagaagtgaagaatgatttgaggagcagaggtttgtgtttgatccctgtt-----ggatgcaccttacacgtggcaagtagtaacggtgctgatttttg 48513293  T
Q  238 gtcacctgct 247  Q
    ||||||||||    
T  48513294 gtcacctgct 48513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 15646737 - 15646571
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || ||||    ||||||||||||| | ||| |||||||||||||      ||||||    
T  15646737 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15646638  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15646637 atttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 8679083 - 8678911
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||||| || ||||||||   ||||||||||||| | ||  ||| |||||||||      ||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8678983 atttttcgtcctacctcc-attttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 17433219 - 17433392
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || || |||||||| ||||||| |||| ||  | ||   ||||||||||||| | ||| ||||||||| |||      ||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17433319 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 26859601 - 26859431
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||||||||||| |||||||||||||||||||||||| |  |||||   ||||||||||||| |  || |||||||||||||      ||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| ||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||| ||||||    
T  26859501 atttttcgtcctaccccccattt-attctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 9018976 - 9019149
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| |||| |||   ||||||||||||| | ||| ||| ||||| |||      ||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| | | ||||||| ||||||||||||||    
T  9019076 atttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 39154022 - 39154195
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||| || || ||   ||||||||||||| | ||| ||||| |||||||      ||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||| ||||||||||||| ||| | |||||||||||||||||| | ||||||||||    
T  39154122 atttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 29307484 - 29307317
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    |||||| |||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||||||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 4636068 - 4636146
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    |||||||||||||  | ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  4636068 ttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 5539814 - 5539906
Alignment:
Q  305 tatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| |||||||||||||    
T  5539814 tatgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 5539906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 21856045 - 21856203
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||||||| | || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 18984661 - 18984538
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  18984661 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984562  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  18984561 atttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 48513114 - 48513173
Alignment:
Q  75 taagattataattgtgtatgagcgttatttcagggggacggagataacaatgtcaatgtcaa 136  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  48513114 taagattataattgtgtatg--cgttatttcagggggacggagataacaatgtcaatatcaa 48513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 463
Target Start/End: Complemental strand, 17433757 - 17433597
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||| ||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 463  Q
    ||||||| ||||||| || ||||| |  || || ||| ||||| |||||||||||||||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 459
Target Start/End: Original strand, 50970281 - 50970437
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| ||||||||||||      |||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttt 459  Q
    ||||||| |||||||  | ||||| |  ||||| ||| ||||| |||||||||||||    
T  50970381 atttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 8678539 - 8678631
Alignment:
Q  305 tatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||| |||||||||||||    
T  8678539 tatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattat 8678631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 29870161 - 29870038
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  29870061 atttttcgtcctacctcctatttt 29870038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 52268293 - 52268428
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || |||| |||||| || ||||||||||||||||||   ||||||||||||| | ||| ||| ||||      ||| |||||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgc 52268392  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    | ||||| |||||||||||||||| | |||||||||    
T  52268393 acttttcgtcctaccccccattttttcctccaaaaa 52268428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 397
Target Start/End: Original strand, 33143925 - 33144007
Alignment:
Q  315 tacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 33144007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 39154562 - 39154439
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||  ||||||||||||      |||||||    
T  39154562 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 39154463  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  39154462 atttttcgtcctacctcctatttt 39154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 4636513 - 4636426
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | |||  ||||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattat 4636426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 15173635 - 15173478
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  15173536 atttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 15646195 - 15646353
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||  || |||||||||      |||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| |  ||||| |  ||||| ||||||||| |||||||||||||||    
T  15646295 atttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 26859062 - 26859149
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || | ||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattat 26859149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 9019505 - 9019338
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||  |||||||| ||| |||| |||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| ||||||| || ||||| |  | ||| ||| ||||| |||| |||||||||||||| ||||    
T  9019405 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 48513039 - 48513080
Alignment:
Q  25 ccttactgaaaatgttgacattgagcaaagtcttgtttgtga 66  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  48513039 ccttacttaaaatgttcacattgagcaaagtcttgtttgtga 48513080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 47826967 - 47827015
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtc 358  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtc 47827015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 2733499 - 2733416
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaa 393  Q
    ||||||| ||||||| || | ||||||||| ||| || ||||||||||||||   ||||||||||||| | ||| |||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 477
Target Start/End: Original strand, 17088286 - 17088326
Alignment:
Q  437 aaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| ||||| |||||||||||||||| ||||||||    
T  17088286 aaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 239356 - 239528
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||||  |||| ||||||||| | ||| |||||||||||||      ||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  239455 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 308 - 475
Target Start/End: Original strand, 11090522 - 11090695
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||      ||||    
T  11090522 gtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 11090621  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  11090622 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 18451373 - 18451200
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | || |||||||||| |||      ||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18451273 atttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 40027143 - 40027316
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  40027143 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 40027242  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  40027243 attttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 43058336 - 43058509
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||||||||||| ||||||||||| | |||||| ||| ||||||||  |||||||||||||| | ||| |||||||||||||      ||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| | |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  43058436 atttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 303 - 477
Target Start/End: Complemental strand, 40815894 - 40815714
Alignment:
Q  303 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 397  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||  ||   ||||||||||||| | ||| | |||||||||||         
T  40815894 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattt 40815795  T
Q  398 -tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
     ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  40815794 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 22374323 - 22374496
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| || |||||||    
T  22374423 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 309 - 470
Target Start/End: Complemental strand, 8425903 - 8425736
Alignment:
Q  309 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttg 402  Q
    |||||||||||||||| |  | ||||||||| |||||||||||||||||||||   |||||||| |||| | ||| |||||||||||||      |||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  403 catttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 1978111 - 1978284
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || | ||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  1978211 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 474
Target Start/End: Original strand, 14432143 - 14432315
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| ||||||| |||| ||||| ||   |||||||| | || | ||| ||||||||| |||      ||||    
T  14432143 gtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgtt 14432242  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctat 474  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14432243 gcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 3025467 - 3025641
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    |||| |||||| ||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||| |||      ||||    
T  3025467 gtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 3025566  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| ||||||||| |||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||    
T  3025567 gcatttttcgtcctacccc-cattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 26538100 - 26538273
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||| |||   ||||||||||||| | | | |||||||||||||      ||||||    
T  26538100 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgc 26538199  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||| || |||||||    
T  26538200 atttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 28616616 - 28616788
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  404 atttttcatcctaccccccattttattctcc-aaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    | ||||| ||||||||||||||||||| ||| ||||| ||||| ||||  |||||||||||||||||||||||    
T  28616716 aattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 26538621 - 26538454
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   | ||||||||||| | ||| ||||||||||||      |||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26538522  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| |||||||||||||||| |  | ||| ||| ||||| ||||||||||||||||||||||||    
T  26538521 atttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 7446345 - 7446519
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||   ||||||||||||| | ||| ||| ||||||||      || ||||    
T  7446345 ttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgc 7446444  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacag----ttttagacctaccccctatg 475  Q
    ||||||| || || |||||||||||||||||||||| ||||| |||||||||    |||||||| |||||||||||    
T  7446445 atttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 35781205 - 35781070
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | |||  |||||||||||      |||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||| ||||| |||||||||||| |||||||||    
T  35781105 atttttcgtcctaacccccattttatcctccaaaaa 35781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 22374867 - 22374709
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||| | ||||||||| |||||||||||||||    
T  22374767 atttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 461
Target Start/End: Complemental strand, 43058883 - 43058717
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 396  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||        
T  43058883 tatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcat 43058784  T
Q  397 -ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
     |||||||||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  43058783 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 20444752 - 20444887
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||| ||||||||      ||| |||||||    
T  20444752 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgc 20444851  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    | ||||| |||||||||||||||||| |||||||||    
T  20444852 agttttcgtcctaccccccattttatcctccaaaaa 20444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 1978651 - 1978564
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 1978564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 7446888 - 7446730
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||| |||||||| ||||||||||   ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 7446789  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||||||| ||||| |||||||||||||||    
T  7446788 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 40027684 - 40027559
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  40027684 gtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 40027585  T
Q  402 gcatttttcatcctaccccccatttt 427  Q
    ||||||||| ||||||| || |||||    
T  40027584 gcatttttcgtcctacctcctatttt 40027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 35779711 - 35779846
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||   ||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||  |||||||||||||||||| |||||||||    
T  35779811 attttttgtcctaccccccattttatcctccaaaaa 35779846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 460
Target Start/End: Original strand, 8425357 - 8425514
Alignment:
Q  309 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttg 402  Q
    |||||||||||||||| || | ||||||||| |||||||||||||||||| |   |||||||||||||| | ||| || ||||||||||      |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttg 8425455  T
Q  403 catttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 460  Q
    |||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 397
Target Start/End: Complemental strand, 239890 - 239807
Alignment:
Q  314 ttacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||  |||||||||||||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattat 239807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 11091062 - 11090975
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||    
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 11090975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 18450833 - 18450920
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||| |   ||||||||||||| | ||| |||||||||||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattat 18450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 28617156 - 28617069
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| ||||  ||||||||||||| | ||  |||||||||||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattat 28617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 40815348 - 40815506
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   |||||||||| || | ||| || |||||||||      |||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  404 atttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || | |||||  ||||| ||| ||||| |||||||||||||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 15551502 - 15551637
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||  ||||||||||| || | ||  ||||||||      ||| |||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||| ||| |||| ||||||||| |||||||||    
T  15551602 atttttcgtccaaccctccattttatcctccaaaaa 15551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 14432683 - 14432525
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||| ||||| || ||||||||||| ||||||| |||| ||||| ||   ||||||||||||||| ||  || |||||||||      |||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 28847237 - 28847150
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||| |||||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattat 28847150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 460
Target Start/End: Complemental strand, 3026003 - 3025848
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 403  Q
    ||||||||| ||||| || |||||||||||  |||||||||||||||| |||   |||||||||| || | ||| ||||||||||||||      |||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 460  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  3025905 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 20440573 - 20440439
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||| ||| ||||      ||| |||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    | ||||| ||||| |||||| ||||| |||||||||    
T  20440473 agttttcgtcctatccccca-tttatcctccaaaaa 20440439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 477
Target Start/End: Complemental strand, 28143446 - 28143400
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  28143446 ctccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 4796 - 4969
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  4896 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 5333 - 5246
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||| |||  ||||||||||||||| ||| ||  |||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattat 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 7e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 10900472 - 10900299
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  10900372 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 20741103 - 20741276
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||| |||      ||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  20741203 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 11277124 - 11276951
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| || ||||||||||      ||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  11277024 atttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 18257140 - 18257313
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  18257240 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 15828183 - 15828010
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| |    |||||||||| || | ||| |||||||||||||      ||||||    
T  15828183 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 15828084  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  15828083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 12935699 - 12935528
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||  ||| |||||||||| | ||| |||||||||||||      |||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| |||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||||||||    
T  12935599 atttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 23074002 - 23074164
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattattgttgcattttt 409  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||| |||| | ||| |||||||||||||     |||||||    
T  23074002 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-----cattttt 23074096  T
Q  410 catcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    | |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||  |||||||    
T  23074097 cgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 28472631 - 28472812
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 397  Q
    |||||| | ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||  ||| |||||||||       
T  28472631 tatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcat 28472730  T
Q  398 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
       ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28472731 ttttgttgcatttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 477
Target Start/End: Original strand, 29859820 - 29860001
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 397  Q
    |||||| | ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||  ||| |||||||||       
T  29859820 tatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcat 29859919  T
Q  398 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
       ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  29859920 ttttgttgcatttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 11444990 - 11445163
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||  ||||||||    |||||||||||||| ||  |||||||||||||      ||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||| ||||||||||||| |||||  |||| |||||||||||||||||||||||||||||||    
T  11445090 atttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 303 - 477
Target Start/End: Complemental strand, 31470865 - 31470685
Alignment:
Q  303 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 397  Q
    |||||| ||||||||||||||| || | ||||||| | |||||||||||| |||| |||   ||||||||||||| | ||| |||||||||||||         
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  398 -tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
     ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 2322762 - 2322588
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||  |||||||||||||| | ||| |||||||||||||      ||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| ||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||| |||||||||||    
T  2322662 gcatttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 1149974 - 1149802
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||| | ||||||| |||| ||||| ||   |||||||| |||| | ||| ||||||||||||      |||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  404 atttttcatcctaccccccattttattctcca-aaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  1149874 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 18505461 - 18505288
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| || |||||   |||||||||| || | |||||||||||||||||      ||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||||||||||||||||||| || | ||| |||||||||||||| | ||| ||||||||||    
T  18505361 atttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 10899941 - 10900109
Alignment:
Q  309 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttg 402  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  403 catttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    |||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 2319675 - 2319832
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  2319775 atttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 11445529 - 11445371
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| ||||||||||||      |||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  11445429 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 12935160 - 12935318
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  12935260 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 23075670 - 23075512
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23075571  T
Q  404 atttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| | ||||| || | |||||  ||||||||||||||| |||||||||||||||    
T  23075570 atttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 464
Target Start/End: Original strand, 4811375 - 4811535
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| ||   || |||||| |||||||||||| ||||| ||   |||||||| |||||| ||| |||||||||||||      |||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacc 464  Q
    ||||||| || |||||||||||||||||| |||||| ||||| |||| |||||||||||||    
T  4811475 atttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 31470318 - 31470476
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||||||| ||||||||      |||||||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgc 31470417  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  31470418 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 18504920 - 18505009
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| || ||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattat 18505009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 22219895 - 22219808
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 22219808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 1149468 - 1149553
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatt 395  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 29033437 - 29033573
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || |||| |||||| || ||||||||||||||||||   ||||||||||||| | ||| ||||||||      ||| |||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  404 atttttcatcctaccccccattttatt-ctccaaaaa 439  Q
    |  ||||||||||||||||||||| || |||||||||    
T  29033537 acatttcatcctaccccccatttttttcctccaaaaa 29033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 4811798 - 4811675
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||| || || || ||||||||||||||| | ||| ||||||||||||      |||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  404 atttttcatcctaccccccatttt 427  Q
    |||||||||| |||| || |||||    
T  4811698 atttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 3835270 - 3835135
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| ||   ||||||||  |||||||||||| ||||||||  | |||||||||||| | ||  |||||| |||||      ||||     
T  3835270 gtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtg 3835171  T
Q  402 gcatttttcatcctaccccccattttattctccaaa 437  Q
    ||||||||| |||||||||||||||||| |||||||    
T  3835170 gcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 18257679 - 18257591
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt 398  Q
    ||||||| ||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||||    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatt 18257591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 20741646 - 20741559
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||| ||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  20741646 ttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattat 20741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 374
Target Start/End: Original strand, 15827641 - 15827705
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaaca 374  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||| ||||  ||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaaca 15827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 11276686 - 11276760
Alignment:
Q  397 ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||| |||||||| ||||||| || ||||| |  ||||||||| ||||| ||||||||||||||| ||||||||    
T  11276686 ttgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 476
Target Start/End: Complemental strand, 35163602 - 35163557
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgc 476  Q
    |||||||||  |||| ||||||||||||||| ||||||||||||||    
T  35163602 ctccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 2865297 - 2865124
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      |||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  2865197 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 8460933 - 8461106
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||| |||||||| ||||||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  8460933 ttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 8461032  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8461033 atttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 8647441 - 8647614
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||      ||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  8647541 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 18183511 - 18183338
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  18183411 atttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 5819471 - 5819298
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||    
T  5819371 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 19359139 - 19359312
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   |||||||| |||| | ||| |||||||||||||      ||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  19359239 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 24362378 - 24362205
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||||||   ||||||||||||||| ||| ||||||||| |||      ||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||    
T  24362278 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 164733 - 164560
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||| | |||||||| || |||||||| | |||||| ||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  164733 ttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 164634  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  164633 attttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 15708974 - 15709146
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || | ||||||||| |||||||||||| ||||  ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    || |||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15709074 atatttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 29455284 - 29455111
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||| |||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||      ||||||    
T  29455284 ttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 29455185  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||| | ||||||    
T  29455184 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 16018592 - 16018763
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----tgttgca 404  Q
    ||||||||||||||| || ||||||||||| ||| ||||||||||| || ||   |||||||| |||| | ||| |||||||||||||     | |||||    
T  16018592 ttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattatatttttattgca 16018691  T
Q  405 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||| | ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16018692 ttttccgtcctacccc-cattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 477
Target Start/End: Complemental strand, 15372422 - 15372242
Alignment:
Q  303 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------atta 396  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||      |||     
T  15372422 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 15372323  T
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||  | ||||  ||||||||||| |||||||| ||||| |||||||||||||||||||||| | ||||||    
T  15372322 ttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 473
Target Start/End: Complemental strand, 14215785 - 14215616
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||  |||||||||||| || |||||   ||||||||||||| | ||| ||||||||| |||      ||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccccta 473  Q
    ||||||| || || |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  14215685 atttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 24332106 - 24331929
Alignment:
Q  310 ttaattacactttt-gatcatcgtgttttgggctactcacgaaattggtcctgtattttt-aaaacagaatacaacagtccttcaattat-------tgt 400  Q
    |||||||||||||| | ||||| ||||||||  ||||||||||| || |||||  ||||| ||||||||| | ||| ||||| |||||||       |||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  401 tgcattttt-catcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| | |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  24332006 tgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 18182971 - 18183131
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  18182971 gtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 18183070  T
Q  402 gcatttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||||||| || | |||||| | ||| ||| ||||| |||||||||||||||    
T  18183071 gcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 477
Target Start/End: Original strand, 25000109 - 25000266
Alignment:
Q  326 tcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatttttcatcctaccc 419  Q
    |||||||||||||| ||||||||||| |||||| ||   | ||||||||||||| ||  |||||| ||||||      | ||||||||||  ||||||||    
T  25000109 tcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccc 25000208  T
Q  420 cccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||||| | ||| |||||||||||||||| ||||| | ||||||    
T  25000209 cccattttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 7349559 - 7349424
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||||||| || | |||  |||||||      ||| |||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    | |||||||||||||||||||||| | |||||||||    
T  7349459 acttttcatcctaccccccattttttcctccaaaaa 7349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 5818930 - 5819090
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  5818930 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 5819029  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| || |||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  5819030 gcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 463
Target Start/End: Complemental strand, 25000631 - 25000471
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||| |||  ||||||||||||| | ||  ||| ||||||||      |||||||    
T  25000631 ttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 25000532  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 463  Q
    ||||||| ||| ||| || ||||| |  ||||||||| ||||| |||||||||||||||||    
T  25000531 atttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 466
Target Start/End: Complemental strand, 14464062 - 14463901
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||  || ||||||||||| |||||||||||| |  |  |||  |||||||| |||| | |||  ||||||||||||      | ||||    
T  14464062 ttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgc 14463963  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagaccta 466  Q
    ||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||    
T  14463962 atttttcgtcctacccca-attttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 19359678 - 19359591
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 19359591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 24331562 - 24331722
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta--------ttgtt 401  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||        |||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||||||||| | || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  24331662 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 24361933 - 24361997
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  24361933 ttgttgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 2864757 - 2864915
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||| || ||   |||||||||| || | ||| ||||||||||||      |||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 4623151 - 4623238
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||||||  | |||||||||||| | ||  |||||||||||||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattat 4623238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 8461473 - 8461386
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  8461473 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattat 8461386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 8647980 - 8647893
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattat 8647893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 463
Target Start/End: Complemental strand, 16019131 - 16018969
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || || ||||||||  ||||||||||||||||||||   |||||||| |||||| ||  || |||||||||      |||||    
T  16019131 gtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgtt 16019032  T
Q  402 gcatttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttagac 463  Q
    | ||||||| ||||||| || | |||||  ||||| ||| ||||| |||||||||||||||||    
T  16019031 gtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 4219666 - 4219804
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 403  Q
    |||||||||||||||||| ||||||||||||||| | || ||| ||||| ||  |||||||||||||| | |   |||||| |      ||| |||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgca 443  Q
    ||||||| ||||| |||||||||||| |||||||||||||    
T  4219766 atttttcgtccta-cccccattttatcctccaaaaatgca 4219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 24325308 - 24325372
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 461  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  24325308 ttgtcgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 15371874 - 15371960
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||||||||||   ||||||||||||| | ||  |||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacg-aattggtcctgcccttttaaaacagaacaaaatggtccttcaattat 15371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 29454743 - 29454830
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||||| |||||||| |||| ||||||||| |||||||||||||||||| ||   ||||||||||||| | ||| |||||| ||||||    
T  29454743 ttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattat 29454830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 460
Target Start/End: Original strand, 164194 - 164350
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgca 404  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||| |||| || | ||| ||| ||||||||     ||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcattttgttgca 164293  T
Q  405 tttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 460  Q
    |||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||| |||||    
T  164294 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 377
Target Start/End: Complemental strand, 4222264 - 4222197
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 377  Q
    ||||||||||||||| || |||||||||||||| ||||||||| ||||| ||   |||||||||||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaa 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 477
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  418 cccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||| || | |||| ||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 439
Target Start/End: Complemental strand, 4624736 - 4624632
Alignment:
Q  341 ctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatttttcatcctaccccccattttattctcc 434  Q
    |||||||||||||||||| ||| | ||||||||| || | |||  || |||||||||      ||||||||||||| |||||||||||||||||| || |    
T  4624736 ctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccattttatccttc 4624637  T
Q  435 aaaaa 439  Q
    |||||    
T  4624636 aaaaa 4624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 15523776 - 15523603
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||   |||||||||| || | ||  ||||||||| |||      ||||||    
T  15523776 ttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgc 15523677  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  15523676 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 46193947 - 46193774
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| |||||||||||||      | ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||||    
T  46193847 atttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 33109687 - 33109860
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  33109787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 4219560 - 4219733
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   |||||||| | || | |||||||||||||||||      ||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  4219660 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 11153689 - 11153516
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | |||  ||||||||||||      ||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||| ||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||    
T  11153589 atttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 25447778 - 25447611
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccc 471  Q
    ||||||| |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  25447678 atttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 22170478 - 22170306
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||  ||||| ||||||||| |||||  ||||||||||| || | ||| ||| |||||||||      ||||||    
T  22170478 ttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttgc 22170380  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  22170379 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 477
Target Start/End: Complemental strand, 22434726 - 22434547
Alignment:
Q  302 atttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat---- 397  Q
    ||||| ||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| ||| |||||||||        
T  22434726 atttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatt 22434628  T
Q  398 --tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
      ||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  22434627 tttgttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 38962361 - 38962195
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||| ||| |||||||| |||||| |   ||||||||||||| | ||| |||||||||||||      ||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 12234332 - 12234505
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || || ||||||||  || |||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12234431  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||    
T  12234432 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 25937673 - 25937846
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||| | |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||  ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  25937773 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 23494446 - 23494619
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | | | |||||||||||||      | ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| | ||||||    
T  23494546 atttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 48526199 - 48526371
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| |  ||||||||||  ||||||| |||| |||  |||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  48526299 atttttcgtcctacccc-cattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 51020800 - 51020973
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    |||||||||||||||||| || ||||||||   | |||| ||| ||||||||   ||||||||||||| | |||  ||||||||||||      ||||||    
T  51020800 ttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 51020899  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||||||    
T  51020900 atttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 2118839 - 2118665
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||||||||| || ||||||||||| || |||| |||| ||||||| |  |||||||||| || | ||| ||| |||||||||      ||||    
T  2118839 gtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgtt 2118740  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  2118739 gcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 54995611 - 54995437
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttg 402  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   |||||||| |||| | ||| ||||||||| ||     ||||||    
T  54995611 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcattttgttg 54995512  T
Q  403 catttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||| ||||| |||||||||||||||| ||||| ||| | |||||| ||||||||||||||| ||||||||    
T  54995511 catttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 397 - 477
Target Start/End: Complemental strand, 12503885 - 12503805
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12503885 ttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 45082433 - 45082606
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| | |||  ||   |||||||| |||| | ||| |||||||||||||      ||||    
T  45082433 gtttaattacgcttttggtcatcgtgttttggtctactcacgaact-ggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgtt 45082531  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||    
T  45082532 gcatttttcgtcctacccc-cattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 463
Target Start/End: Original strand, 46193408 - 46193568
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 463  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||||    
T  46193508 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 18752036 - 18751971
Alignment:
Q  412 tcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  18752036 tcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 48293597 - 48293732
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || |||||||||||  |||||||||||||| |||||| | ||||||||| || | ||  || |||||||||      |||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgc 48293696  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    |||||||||||| ||| |||||||||||||||||||    
T  48293697 atttttcatcctgccctccattttattctccaaaaa 48293732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 25938213 - 25938126
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 25938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 51021337 - 51021215
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgca 404  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||   |||||||||| || | ||| |||||| |||||     ||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcattttgttgca 51021238  T
Q  405 tttttcatcctaccccccatttt 427  Q
    |||||| ||||||| || |||||    
T  51021237 tttttcgtcctacctcctatttt 51021215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 15523238 - 15523326
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt 398  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatt 15523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 22434182 - 22434340
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 23494985 - 23494898
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 23494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 25447250 - 25447408
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||| ||||||    
T  25447350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 461
Target Start/End: Complemental strand, 48526725 - 48526565
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||| ||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  48526725 gtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgtt 48526626  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||||||| || ||||| |  ||||| |||  |||| |||||||||||||||    
T  48526625 gcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 54995070 - 54995230
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||| || |||||| |||| |||||||||||| | |||||    ||||||||||||| | ||| ||||||||||||      |||||    
T  54995070 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 54995169  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||||||| || ||||| |  ||||| ||||| ||| |||||||||||||||    
T  54995170 gcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 427
Target Start/End: Original strand, 2118296 - 2118419
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   |||||||||| || | || |||||||||||||      |||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  2118396 atttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 11153149 - 11153307
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| ||||||| || ||||||||||| |||||||| ||||||||| ||   |||||||| |||||| ||| ||||||||||||      |||||||    
T  11153149 ttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgc 11153248  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  | ||| ||| ||||| |||||||||||||||    
T  11153249 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 12234871 - 12234713
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  12234871 ttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12234772  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  | ||| ||||||||| |||||||||||||||    
T  12234771 atttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 45082966 - 45082808
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  45082866 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 461
Target Start/End: Complemental strand, 4220108 - 4219943
Alignment:
Q  303 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ 396  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||  ||| ||||||||          
T  4220108 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattt 4220009  T
Q  397 ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    |||||||||||||| ||||||| || ||||| |  || |||||| ||||| |||| ||||||||||    
T  4220008 ttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 442
Target Start/End: Complemental strand, 43281313 - 43281195
Alignment:
Q  329 tcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgcatttttcatcctacccccca 423  Q
    ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||  || |||||||||     |||||||||||||| ||||||||||||    
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattatatttttgttgcatttttcgtcctacccccca 43281214  T
Q  424 ttttattctccaaaaatgc 442  Q
    |||||| ||| ||||||||    
T  43281213 ttttatcctcaaaaaatgc 43281195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 33110006 - 33109883
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || || |||||||| || ||||||||||||||||||   |||||||||| || | ||| ||||||||||||      |||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  33109906 atttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 44892690 - 44892555
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||| | ||||| || ||||||||||  |||||||||||| |||| |||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||| |||||||| ||||||||| |||||||||    
T  44892590 atttttcgtcctaccctccattttatcctccaaaaa 44892555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 377
Target Start/End: Complemental strand, 18764062 - 18763995
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 377  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| |||  |||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaa 18763995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 48713890 - 48713753
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    |||||||||||||||| ||  ||||||||| | ||||||| |||| ||||| ||   ||||||||||||| | ||  ||||||||||||      |||||    
T  48713890 gtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgtt 48713791  T
Q  402 gcatttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||||| |||| ||| ||||||||| |||||||||    
T  48713790 gcatttttcgtcctcccctccattttatcctccaaaaa 48713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 18751600 - 18751760
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgtt 401  Q
    ||||||||||||||||| || ||||||||||| |||||||  ||| ||||| ||   ||||||||||||| | ||| ||||||||      ||| |||||    
T  18751600 gtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgtt 18751699  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||||| ||| ||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  18751700 gcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 48295085 - 48294949
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||| ||||| |||||||||||||  |||||||||||||||||| ||  | ||||||||| || | ||  ||| ||||||||      |||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  404 attttt-catcctaccccccattttattctccaaaaa 439  Q
    |||||| | ||||||||||||||||||  ||||||||    
T  48294985 atttttccgtcctaccccccattttatcttccaaaaa 48294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 437
Target Start/End: Original strand, 16690937 - 16691072
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 401  Q
    ||||||||||| ||||| || | ||||||||  |||||||||||| ||||||||  | ||||||||| || | ||   ||||||||||||      ||||    
T  16690937 gtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgtt 16691036  T
Q  402 gcatttttcatcctaccccccattttattctccaaa 437  Q
    ||||||||| |||||||||| ||||||| |||||||    
T  16691037 gcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 20471053 - 20470895
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||| |    ||||||||||||| | ||| ||| ||||||||      |||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  20470953 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 35363143 - 35363096
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggt 357  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggt 35363096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 10258429 - 10258363
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacaga 376  Q
    ||||||||||||||| || ||||||| ||| ||||||| |||||||||||||   ||||||||||||    
T  10258429 ttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacaga 10258363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 379
Target Start/End: Complemental strand, 16318318 - 16318249
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaata 379  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| || |||||   |||||||||||||||    
T  16318318 ttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaata 16318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 477
Target Start/End: Complemental strand, 17504365 - 17504329
Alignment:
Q  441 gcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17504365 gcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 20958401 - 20958268
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||  || |||| |||||| |||||||||||| ||||||||   ||||||||||||| | |   ||||||||||||      |||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  404 atttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||  ||||| |||||||||||| |||||||||    
T  20958301 attttt-gtccta-cccccattttatcctccaaaaa 20958268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 477
Target Start/End: Original strand, 35193447 - 35193483
Alignment:
Q  441 gcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||| |||||||||||||||||||||||||||||||    
T  35193447 gcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 477
Target Start/End: Original strand, 17504119 - 17504149
Alignment:
Q  447 aaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||||||||||||||||    
T  17504119 aaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 477
Target Start/End: Original strand, 40160239 - 40160269
Alignment:
Q  447 aaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||||||||||||||||||||    
T  40160239 aaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 44890613 - 44890655
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaa 439  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||    
T  44890613 ttgttgcatttttcatcataccccccattttatcctcaaaaaa 44890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 20957285 - 20957330
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgc 442  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||    
T  20957285 ttgttgcatttttcgtcatactccccattttattctcaaaaaatgc 20957330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 4749 - 4576
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||| ||||||      ||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  4649 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 756 - 928
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----tgttgca 404  Q
    ||||||||||||||| || ||||||||||| |||||||||| | ||||||||   ||||||||||||| | ||| |||||||||||||     |||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgttgca 855  T
Q  405 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| ||||||    
T  856 tttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 1283 - 1116
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||  || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    || |||| ||||||| || ||||| |  | ||| ||| ||||||||||| |||||||||||| |||||    
T  1183 atctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 1670 - 1841
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   ||||||||||||| | ||   ||||||||||||      ||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 475  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1770 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 2209 - 2051
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  404 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 461  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  2109 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 134224 - 134042
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 396  Q
    |||||| | ||||||||||||||| || ||||||||||| |||||||||||| | ||| ||   |||||| |||||| | |||  |||||||||||        
T  134224 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacat 134125  T
Q  397 --ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
      |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  134124 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 83; Significance: 4e-39; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 64305 - 64478
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||   ||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  64305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 64404  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  64405 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 64849 - 64760
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||||| || |||||||||||  ||||||||||| |||||| |   ||||||||||||| | ||| |||||| ||||||    
T  64849 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattat 64760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 477
Target Start/End: Complemental strand, 205784 - 205738
Alignment:
Q  431 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  205784 ctccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 403  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||  |    ||||||||||||| | ||| |||||||||||||      ||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  404 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctaccccc-attttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 329 - 477
Target Start/End: Original strand, 10643 - 10797
Alignment:
Q  329 tcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgcatttttcatcctacccccc 422  Q
    ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||| |||       |||||||||||| |||||||| ||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  423 attttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  10743 attttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 11165 - 11042
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 403  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   |||||||||| || | ||| ||||||||||||      |||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  404 atttttcatcctaccccccatttt 427  Q
    ||||||| ||||||| || |||||    
T  11065 atttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 397 - 477
Target Start/End: Original strand, 16592 - 16672
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  16592 ttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 42709 - 42528
Alignment:
Q  301 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 397  Q
    |||||| | ||||||| |||||||  | ||||||||||| ||||||| |||| || | |||   ||||||||||||| | ||| |||||||| ||||       
T  42709 tatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat 42610  T
Q  398 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 477  Q
       |||| |||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  42609 ttttgtttcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 470
Target Start/End: Original strand, 42170 - 42339
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 401  Q
    ||||||||||||||||  |  ||||||||||| ||| |||||||| || |||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  42170 gtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgtt 42269  T
Q  402 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 470  Q
    ||||||||  || |||| || ||||| |  || || ||| ||||| ||||||||||||||||||||||||    
T  42270 gcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 468
Target Start/End: Original strand, 18841 - 19001
Alignment:
Q  313 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatt 406  Q
    |||||||||||| || |  |||||||| |||||||||||| ||||| ||   |||||||||| || | ||| || ||||||||||      |||||||||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatt 18940  T
Q  407 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacc 468  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||| ||||    
T  18941 tttcatcctacccc-cattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 19163 - 19076
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattat 19076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 570 - 657
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| |||||||||||||    
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattat 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 62002 - 61950
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcct 360  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcct 61950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 61031 - 61082
Alignment:
Q  310 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctg 361  Q
    |||| ||||||||||||| ||||||||||| |||||||||||| || |||||    
T  61031 ttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctg 61082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  311 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgca 404  Q
    |||||||||||||| |||||||||||||| ||||| |||||| ||||| ||   ||||||||||||| | ||| ||| ||||||||      ||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  405 tttttcatcctaccccccatttt 427  Q
     ||||| |||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Complemental strand, 7737 - 7695
Alignment:
Q  397 ttgttgcatttttcatcctaccccccattttattctccaaaaa 439  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  7737 ttgttgcatttttcgtcctaccccctattttatcctccaaaaa 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 8553 - 8464
Alignment:
Q  308 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 397  Q
    ||||||||||||||||| || || |||||||| ||||| |||||| |||||||    |||||||||| |  | ||| |||||||||||||    
T  8553 gtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattat 8464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University