View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11658_high_6 (Length: 538)

Name: NF11658_high_6
Description: NF11658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11658_high_6
NF11658_high_6
[»] chr6 (75 HSPs)
chr6 (109-253)||(31378819-31378963)
chr6 (255-321)||(10770664-10770730)
chr6 (261-317)||(16766706-16766762)
chr6 (251-314)||(31384919-31384982)
chr6 (261-317)||(9107364-9107420)
chr6 (261-321)||(12696333-12696393)
chr6 (27-99)||(31380253-31380325)
chr6 (255-311)||(34595137-34595193)
chr6 (255-317)||(8365513-8365575)
chr6 (261-317)||(5970102-5970158)
chr6 (255-311)||(7801156-7801212)
chr6 (261-317)||(9522900-9522956)
chr6 (261-311)||(7977830-7977880)
chr6 (255-309)||(16833311-16833365)
chr6 (261-362)||(17841537-17841639)
chr6 (261-311)||(28715304-28715354)
chr6 (255-311)||(853859-853915)
chr6 (255-311)||(8776973-8777029)
chr6 (261-321)||(9025484-9025544)
chr6 (261-356)||(28152108-28152203)
chr6 (261-315)||(9911524-9911579)
chr6 (261-362)||(32978847-32978950)
chr6 (261-311)||(403864-403914)
chr6 (261-311)||(426514-426564)
chr6 (255-305)||(1681761-1681811)
chr6 (261-356)||(3398628-3398728)
chr6 (261-315)||(7930314-7930368)
chr6 (261-310)||(7938125-7938174)
chr6 (261-317)||(8713988-8714045)
chr6 (261-306)||(31959168-31959213)
chr6 (261-321)||(2224235-2224295)
chr6 (261-320)||(2117085-2117143)
chr6 (259-356)||(9629390-9629499)
chr6 (255-310)||(15489733-15489788)
chr6 (261-373)||(4877951-4878064)
chr6 (261-311)||(6327518-6327568)
chr6 (261-311)||(6898281-6898331)
chr6 (261-311)||(7265593-7265643)
chr6 (261-315)||(21395304-21395357)
chr6 (261-311)||(21924935-21924985)
chr6 (262-311)||(1700362-1700411)
chr6 (255-315)||(17302559-17302620)
chr6 (261-356)||(24645489-24645586)
chr6 (264-317)||(26562701-26562754)
chr6 (261-305)||(1191706-1191750)
chr6 (261-313)||(7151421-7151473)
chr6 (261-321)||(9027187-9027247)
chr6 (261-317)||(34073341-34073397)
chr6 (261-311)||(3209390-3209441)
chr6 (263-314)||(7973665-7973716)
chr6 (261-312)||(9617443-9617494)
chr6 (280-311)||(16388217-16388248)
chr6 (261-296)||(16388248-16388283)
chr6 (261-304)||(17341671-17341714)
chr6 (255-346)||(34290048-34290133)
chr6 (261-303)||(4118341-4118383)
chr6 (262-311)||(7027251-7027301)
chr6 (261-311)||(7996378-7996428)
chr6 (261-311)||(8022373-8022423)
chr6 (261-303)||(17435208-17435250)
chr6 (261-315)||(18252747-18252801)
chr6 (261-311)||(19040361-19040411)
chr6 (266-316)||(19369831-19369881)
chr6 (261-311)||(32511666-32511716)
chr6 (261-311)||(33001289-33001339)
chr6 (280-314)||(34197139-34197173)
chr6 (280-317)||(785449-785486)
chr6 (261-314)||(9195751-9195804)
chr6 (270-311)||(26402680-26402721)
chr6 (255-296)||(34225824-34225865)
chr6 (261-317)||(7723244-7723300)
chr6 (280-316)||(20576628-20576664)
chr6 (261-301)||(25010212-25010252)
chr6 (270-310)||(27904037-27904077)
chr6 (270-310)||(31429004-31429044)
[»] chr4 (52 HSPs)
chr4 (270-520)||(19312353-19312610)
chr4 (261-372)||(11596295-11596402)
chr4 (261-362)||(23292934-23293036)
chr4 (261-321)||(3947756-3947816)
chr4 (261-321)||(12895106-12895166)
chr4 (261-356)||(21945512-21945608)
chr4 (270-362)||(28084540-28084635)
chr4 (261-309)||(29205453-29205501)
chr4 (255-311)||(54580023-54580079)
chr4 (255-317)||(19482671-19482733)
chr4 (261-311)||(28964248-28964298)
chr4 (252-317)||(4383368-4383432)
chr4 (261-309)||(6485613-6485661)
chr4 (261-311)||(12797338-12797387)
chr4 (255-317)||(24613695-24613757)
chr4 (261-311)||(38847012-38847062)
chr4 (270-315)||(12708165-12708210)
chr4 (261-314)||(16303263-16303316)
chr4 (261-313)||(30298955-30299008)
chr4 (261-313)||(30327823-30327876)
chr4 (270-311)||(42640547-42640588)
chr4 (270-362)||(715553-715648)
chr4 (270-362)||(752879-752974)
chr4 (265-317)||(30982872-30982924)
chr4 (261-317)||(51701267-51701323)
chr4 (261-315)||(28000738-28000793)
chr4 (255-353)||(34306761-34306859)
chr4 (252-303)||(40481637-40481687)
chr4 (261-311)||(49431034-49431085)
chr4 (261-311)||(2361975-2362025)
chr4 (261-311)||(8423718-8423768)
chr4 (261-311)||(12895274-12895324)
chr4 (261-311)||(16073404-16073453)
chr4 (256-310)||(35157986-35158040)
chr4 (266-311)||(6879465-6879510)
chr4 (261-314)||(27706174-27706227)
chr4 (255-311)||(4157153-4157208)
chr4 (261-316)||(5775353-5775408)
chr4 (270-317)||(22234884-22234931)
chr4 (261-312)||(31800477-31800528)
chr4 (271-356)||(4157455-4157541)
chr4 (261-311)||(15029774-15029824)
chr4 (261-319)||(15659752-15659810)
chr4 (261-315)||(30838219-30838273)
chr4 (255-321)||(32273516-32273582)
chr4 (261-303)||(37203273-37203315)
chr4 (261-311)||(40179636-40179686)
chr4 (261-316)||(50280890-50280947)
chr4 (261-310)||(847960-848009)
chr4 (261-298)||(14465088-14465125)
chr4 (261-310)||(47263995-47264044)
chr4 (261-317)||(40742600-40742656)
[»] chr1 (90 HSPs)
chr1 (1-113)||(30368264-30368376)
chr1 (1-110)||(13204386-13204495)
chr1 (1-110)||(13070332-13070441)
chr1 (1-110)||(13100928-13101036)
chr1 (1-107)||(13007130-13007236)
chr1 (7-108)||(13244683-13244784)
chr1 (7-110)||(13094326-13094429)
chr1 (7-110)||(13129755-13129858)
chr1 (7-110)||(13161448-13161551)
chr1 (261-356)||(1486658-1486759)
chr1 (379-477)||(27775272-27775371)
chr1 (261-356)||(1704949-1705042)
chr1 (255-315)||(24577182-24577242)
chr1 (261-356)||(113308-113398)
chr1 (261-362)||(22515835-22515937)
chr1 (259-311)||(18337336-18337388)
chr1 (261-317)||(47989506-47989562)
chr1 (261-316)||(6612166-6612221)
chr1 (1-100)||(13065369-13065468)
chr1 (1-108)||(13271515-13271622)
chr1 (261-362)||(46348331-46348433)
chr1 (255-372)||(22881565-22881672)
chr1 (255-371)||(37598835-37598951)
chr1 (261-310)||(40258934-40258983)
chr1 (255-310)||(28273089-28273144)
chr1 (261-311)||(38078661-38078711)
chr1 (261-311)||(42359449-42359499)
chr1 (19-104)||(12964049-12964134)
chr1 (1-110)||(19279324-19279433)
chr1 (261-372)||(5898204-5898316)
chr1 (14-110)||(13086034-13086130)
chr1 (261-355)||(51410033-51410129)
chr1 (265-371)||(1815270-1815377)
chr1 (255-314)||(6332674-6332732)
chr1 (261-316)||(9629895-9629950)
chr1 (270-317)||(31694704-31694751)
chr1 (270-321)||(35919266-35919317)
chr1 (262-317)||(44482240-44482295)
chr1 (270-316)||(5944301-5944347)
chr1 (261-317)||(17778558-17778611)
chr1 (261-311)||(31672895-31672945)
chr1 (261-362)||(34712331-34712433)
chr1 (261-310)||(18190109-18190158)
chr1 (261-306)||(31015052-31015097)
chr1 (261-309)||(21378587-21378635)
chr1 (261-316)||(5376495-5376550)
chr1 (262-317)||(25361896-25361951)
chr1 (280-322)||(2218267-2218309)
chr1 (261-311)||(5927340-5927390)
chr1 (261-315)||(7918207-7918261)
chr1 (261-315)||(9828053-9828107)
chr1 (261-377)||(15323172-15323294)
chr1 (261-311)||(19058856-19058906)
chr1 (264-314)||(25272494-25272544)
chr1 (255-309)||(32434718-32434772)
chr1 (255-309)||(32461465-32461519)
chr1 (261-311)||(35702588-35702638)
chr1 (261-311)||(41877470-41877520)
chr1 (324-377)||(21365985-21366038)
chr1 (270-315)||(30173758-30173803)
chr1 (261-310)||(36878470-36878519)
chr1 (261-317)||(40917760-40917814)
chr1 (261-306)||(48450592-48450637)
chr1 (261-309)||(1864882-1864930)
chr1 (261-317)||(8010281-8010337)
chr1 (261-321)||(20157340-20157400)
chr1 (261-317)||(38503329-38503385)
chr1 (261-296)||(398780-398815)
chr1 (253-312)||(2283667-2283726)
chr1 (261-296)||(16927200-16927235)
chr1 (280-311)||(24334705-24334736)
chr1 (267-314)||(34371728-34371775)
chr1 (261-315)||(6427359-6427413)
chr1 (261-311)||(9103649-9103698)
chr1 (322-372)||(9828126-9828176)
chr1 (261-303)||(11605943-11605985)
chr1 (28-110)||(13081048-13081130)
chr1 (271-317)||(15449226-15449272)
chr1 (270-312)||(28663626-28663668)
chr1 (261-311)||(40181880-40181930)
chr1 (261-311)||(52903258-52903308)
chr1 (270-307)||(18471318-18471355)
chr1 (270-311)||(21620973-21621014)
chr1 (261-310)||(27471567-27471616)
chr1 (255-314)||(6427464-6427526)
chr1 (265-309)||(13997896-13997940)
chr1 (261-317)||(17754320-17754376)
chr1 (261-313)||(18556454-18556506)
chr1 (261-309)||(23738687-23738735)
chr1 (270-314)||(48148034-48148078)
[»] chr7 (56 HSPs)
chr7 (251-372)||(5409769-5409896)
chr7 (262-372)||(9778510-9778626)
chr7 (261-317)||(24339651-24339707)
chr7 (251-316)||(7058425-7058490)
chr7 (261-317)||(26033455-26033511)
chr7 (261-362)||(43027412-43027519)
chr7 (255-321)||(32094010-32094077)
chr7 (255-312)||(3991327-3991384)
chr7 (262-323)||(5548686-5548747)
chr7 (261-317)||(18039007-18039064)
chr7 (188-253)||(23922811-23922876)
chr7 (261-317)||(7438715-7438771)
chr7 (261-317)||(9408328-9408384)
chr7 (261-321)||(11890909-11890969)
chr7 (261-321)||(13770700-13770760)
chr7 (261-321)||(18215176-18215236)
chr7 (261-371)||(15680818-15680929)
chr7 (262-317)||(11272580-11272637)
chr7 (261-311)||(25481911-25481961)
chr7 (261-315)||(27945050-27945104)
chr7 (270-370)||(2334268-2334379)
chr7 (261-317)||(13300419-13300475)
chr7 (255-362)||(40287310-40287412)
chr7 (270-317)||(21560521-21560568)
chr7 (255-348)||(8234149-8234243)
chr7 (255-317)||(11665434-11665496)
chr7 (261-362)||(20549800-20549902)
chr7 (261-311)||(21880161-21880211)
chr7 (261-310)||(11061077-11061126)
chr7 (261-362)||(1433463-1433570)
chr7 (261-321)||(16341505-16341565)
chr7 (261-312)||(19992010-19992061)
chr7 (270-356)||(21864826-21864913)
chr7 (265-316)||(22602705-22602756)
chr7 (261-311)||(7197297-7197347)
chr7 (255-301)||(11831435-11831481)
chr7 (261-311)||(19213812-19213862)
chr7 (255-317)||(25822658-25822720)
chr7 (261-311)||(28155579-28155629)
chr7 (263-372)||(33994223-33994333)
chr7 (255-312)||(35861967-35862024)
chr7 (266-314)||(1885587-1885635)
chr7 (261-317)||(32308129-32308185)
chr7 (266-310)||(48438560-48438604)
chr7 (261-316)||(7328686-7328741)
chr7 (260-315)||(12843171-12843226)
chr7 (261-315)||(6028634-6028688)
chr7 (263-317)||(17307904-17307958)
chr7 (261-315)||(18013070-18013124)
chr7 (261-311)||(24105687-24105737)
chr7 (261-311)||(26733313-26733363)
chr7 (261-310)||(1401034-1401083)
chr7 (262-311)||(9482944-9482993)
chr7 (261-321)||(7758331-7758391)
chr7 (270-302)||(13557750-13557782)
chr7 (261-317)||(26329376-26329432)
[»] chr3 (61 HSPs)
chr3 (255-362)||(55401078-55401186)
chr3 (261-319)||(49651778-49651836)
chr3 (261-321)||(25948877-25948937)
chr3 (261-313)||(28918010-28918062)
chr3 (255-362)||(34910320-34910428)
chr3 (261-356)||(1509548-1509639)
chr3 (255-317)||(14209116-14209178)
chr3 (255-355)||(10954955-10955056)
chr3 (261-314)||(15796291-15796344)
chr3 (261-317)||(4987285-4987341)
chr3 (255-362)||(20503468-20503576)
chr3 (261-362)||(27505255-27505362)
chr3 (261-356)||(3163985-3164075)
chr3 (261-308)||(26508119-26508166)
chr3 (255-314)||(28812518-28812577)
chr3 (261-315)||(34185119-34185173)
chr3 (255-317)||(41961644-41961706)
chr3 (261-311)||(51206353-51206403)
chr3 (252-317)||(14832099-14832164)
chr3 (261-321)||(21479127-21479188)
chr3 (261-353)||(26492162-26492255)
chr3 (263-311)||(8587021-8587069)
chr3 (261-313)||(21256984-21257036)
chr3 (255-314)||(14216895-14216954)
chr3 (255-314)||(14223024-14223083)
chr3 (261-311)||(25775517-25775568)
chr3 (255-317)||(750612-750674)
chr3 (261-311)||(7928459-7928509)
chr3 (261-311)||(8383266-8383316)
chr3 (261-315)||(16789021-16789075)
chr3 (261-310)||(10268487-10268536)
chr3 (261-314)||(17005616-17005669)
chr3 (261-317)||(8039829-8039885)
chr3 (261-317)||(14829699-14829754)
chr3 (255-311)||(16000016-16000072)
chr3 (270-373)||(40993272-40993376)
chr3 (269-311)||(8593154-8593196)
chr3 (252-321)||(29508444-29508514)
chr3 (261-315)||(39756245-39756299)
chr3 (261-314)||(4990964-4991017)
chr3 (262-362)||(8789496-8789599)
chr3 (261-317)||(9800049-9800105)
chr3 (255-311)||(10335286-10335342)
chr3 (261-349)||(14747570-14747655)
chr3 (261-305)||(35994744-35994787)
chr3 (261-309)||(55212972-55213020)
chr3 (261-304)||(11610530-11610573)
chr3 (263-314)||(15314873-15314924)
chr3 (261-315)||(1550149-1550203)
chr3 (268-310)||(3865690-3865732)
chr3 (271-356)||(7171520-7171606)
chr3 (287-321)||(11155064-11155098)
chr3 (261-295)||(14979190-14979224)
chr3 (261-370)||(18426958-18427068)
chr3 (261-311)||(38731227-38731277)
chr3 (261-314)||(11665953-11666006)
chr3 (269-362)||(17276742-17276838)
chr3 (261-321)||(34307770-34307830)
chr3 (261-317)||(16192744-16192800)
chr3 (261-317)||(22774064-22774120)
chr3 (251-311)||(48353731-48353791)
[»] chr5 (57 HSPs)
chr5 (371-477)||(40578163-40578270)
chr5 (261-321)||(31084332-31084392)
chr5 (261-317)||(39698550-39698606)
chr5 (261-311)||(6247631-6247681)
chr5 (261-315)||(13287395-13287449)
chr5 (261-311)||(21191056-21191106)
chr5 (255-362)||(21351858-21351961)
chr5 (261-317)||(7677714-7677770)
chr5 (255-321)||(5894823-5894889)
chr5 (255-321)||(10298572-10298638)
chr5 (255-317)||(21542033-21542095)
chr5 (261-311)||(21576745-21576795)
chr5 (261-310)||(42893369-42893418)
chr5 (261-309)||(17177025-17177073)
chr5 (261-317)||(21522759-21522815)
chr5 (261-317)||(21533325-21533381)
chr5 (255-311)||(33178028-33178084)
chr5 (261-317)||(37328838-37328894)
chr5 (261-321)||(43001809-43001869)
chr5 (261-311)||(8420036-8420086)
chr5 (270-356)||(15382497-15382590)
chr5 (261-315)||(19579710-19579764)
chr5 (261-307)||(24906305-24906351)
chr5 (261-306)||(14674278-14674323)
chr5 (255-304)||(15405062-15405111)
chr5 (270-311)||(15884006-15884047)
chr5 (251-312)||(40131620-40131681)
chr5 (261-317)||(41633744-41633800)
chr5 (261-320)||(6471880-6471939)
chr5 (255-314)||(30183552-30183611)
chr5 (261-315)||(3966512-3966566)
chr5 (261-307)||(7218271-7218317)
chr5 (261-366)||(17088293-17088406)
chr5 (261-311)||(28588674-28588724)
chr5 (255-315)||(30135316-30135377)
chr5 (262-311)||(43564891-43564940)
chr5 (270-314)||(12199948-12199992)
chr5 (262-371)||(14873527-14873642)
chr5 (261-321)||(38749553-38749613)
chr5 (270-317)||(25888287-25888334)
chr5 (261-315)||(16374338-16374392)
chr5 (265-356)||(23015938-23016035)
chr5 (261-311)||(26312778-26312828)
chr5 (261-311)||(30502388-30502438)
chr5 (261-311)||(30542731-30542781)
chr5 (265-315)||(41091253-41091303)
chr5 (261-303)||(4105266-4105310)
chr5 (263-304)||(6326304-6326345)
chr5 (261-317)||(19552539-19552593)
chr5 (261-314)||(36838552-36838605)
chr5 (467-504)||(40578096-40578133)
chr5 (264-321)||(41558644-41558701)
chr5 (261-321)||(2436931-2436991)
chr5 (261-305)||(5467984-5468028)
chr5 (261-317)||(22423806-22423862)
chr5 (261-305)||(25863213-25863257)
chr5 (261-321)||(39205889-39205949)
[»] chr2 (48 HSPs)
chr2 (379-477)||(19804798-19804897)
chr2 (261-362)||(2438667-2438769)
chr2 (261-316)||(30717525-30717580)
chr2 (255-321)||(974750-974816)
chr2 (261-362)||(23058392-23058493)
chr2 (261-317)||(12668417-12668473)
chr2 (261-313)||(20539672-20539724)
chr2 (261-317)||(37419752-37419808)
chr2 (256-314)||(15657868-15657926)
chr2 (261-311)||(30404850-30404900)
chr2 (261-321)||(14996213-14996274)
chr2 (255-311)||(19536397-19536454)
chr2 (265-317)||(4882690-4882742)
chr2 (255-362)||(18840961-18841069)
chr2 (265-316)||(33153437-33153488)
chr2 (255-314)||(36756341-36756400)
chr2 (255-305)||(12940941-12940991)
chr2 (261-311)||(15972882-15972932)
chr2 (261-311)||(18421972-18422022)
chr2 (261-311)||(37558986-37559036)
chr2 (281-362)||(44635527-44635604)
chr2 (261-310)||(11223864-11223913)
chr2 (255-311)||(20473325-20473381)
chr2 (261-321)||(24894398-24894458)
chr2 (255-311)||(30335420-30335476)
chr2 (261-304)||(21374706-21374749)
chr2 (252-311)||(5040732-5040793)
chr2 (273-353)||(29367300-29367382)
chr2 (261-311)||(34691805-34691855)
chr2 (261-311)||(34714217-34714267)
chr2 (261-311)||(38117159-38117209)
chr2 (261-314)||(44860329-44860382)
chr2 (261-309)||(39279684-39279732)
chr2 (280-311)||(21624295-21624326)
chr2 (261-296)||(28677918-28677953)
chr2 (261-304)||(39323273-39323316)
chr2 (261-311)||(5367201-5367251)
chr2 (261-311)||(18255980-18256030)
chr2 (261-315)||(18420430-18420484)
chr2 (261-315)||(18622615-18622669)
chr2 (255-317)||(26769514-26769576)
chr2 (267-317)||(35056883-35056933)
chr2 (267-316)||(32749820-32749869)
chr2 (272-317)||(34784976-34785021)
chr2 (261-310)||(42832277-42832326)
chr2 (261-309)||(29176495-29176543)
chr2 (283-311)||(33884082-33884110)
chr2 (255-311)||(38442310-38442366)
[»] chr8 (49 HSPs)
chr8 (188-253)||(17507331-17507396)
chr8 (261-314)||(25566850-25566903)
chr8 (261-315)||(2572052-2572106)
chr8 (261-311)||(4948661-4948711)
chr8 (188-253)||(10643759-10643824)
chr8 (261-317)||(22651985-22652041)
chr8 (261-312)||(8342981-8343032)
chr8 (255-314)||(15816126-15816185)
chr8 (261-311)||(20873078-20873128)
chr8 (261-365)||(40332200-40332305)
chr8 (261-317)||(13436958-13437014)
chr8 (261-317)||(29510298-29510354)
chr8 (255-311)||(36450754-36450810)
chr8 (261-312)||(8343325-8343376)
chr8 (261-315)||(21465421-21465475)
chr8 (255-317)||(29447104-29447166)
chr8 (261-311)||(30077387-30077437)
chr8 (203-253)||(32712012-32712062)
chr8 (261-356)||(41831889-41831990)
chr8 (261-310)||(4298887-4298936)
chr8 (261-314)||(11927083-11927136)
chr8 (255-316)||(17468503-17468564)
chr8 (270-321)||(24858030-24858080)
chr8 (261-311)||(22596003-22596053)
chr8 (261-311)||(24613530-24613579)
chr8 (261-311)||(24669442-24669492)
chr8 (265-315)||(30271287-30271337)
chr8 (261-310)||(4673426-4673475)
chr8 (261-314)||(11944674-11944727)
chr8 (261-310)||(20679396-20679445)
chr8 (261-310)||(22197743-22197792)
chr8 (261-310)||(31557006-31557054)
chr8 (261-305)||(18407728-18407772)
chr8 (261-317)||(28745507-28745563)
chr8 (264-311)||(18170482-18170529)
chr8 (264-311)||(18634050-18634097)
chr8 (261-311)||(3025560-3025610)
chr8 (261-311)||(4786338-4786388)
chr8 (261-311)||(5813601-5813651)
chr8 (261-311)||(13844596-13844646)
chr8 (261-311)||(34897094-34897144)
chr8 (261-310)||(12606830-12606879)
chr8 (270-307)||(12882332-12882369)
chr8 (261-310)||(14134708-14134757)
chr8 (261-309)||(7442854-7442902)
chr8 (322-362)||(22652058-22652098)
chr8 (261-317)||(24362196-24362252)
chr8 (272-312)||(26902174-26902214)
chr8 (261-321)||(34222956-34223016)
[»] scaffold0223 (1 HSPs)
scaffold0223 (261-317)||(20181-20237)
[»] scaffold0171 (2 HSPs)
scaffold0171 (270-321)||(23438-23489)
scaffold0171 (270-317)||(23529-23576)
[»] scaffold0053 (1 HSPs)
scaffold0053 (261-355)||(8807-8902)
[»] scaffold0011 (1 HSPs)
scaffold0011 (255-310)||(17750-17805)
[»] scaffold0652 (1 HSPs)
scaffold0652 (261-311)||(462-512)
[»] scaffold0044 (1 HSPs)
scaffold0044 (259-317)||(53187-53245)
[»] scaffold0027 (1 HSPs)
scaffold0027 (261-311)||(46691-46741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (261-314)||(23778-23832)
[»] scaffold0136 (1 HSPs)
scaffold0136 (261-314)||(3846-3899)
[»] scaffold0361 (1 HSPs)
scaffold0361 (255-302)||(14533-14580)
[»] scaffold0306 (1 HSPs)
scaffold0306 (255-321)||(13403-13470)
[»] scaffold0152 (1 HSPs)
scaffold0152 (255-321)||(21857-21924)
[»] scaffold0021 (1 HSPs)
scaffold0021 (261-308)||(130491-130538)
[»] scaffold0450 (1 HSPs)
scaffold0450 (255-317)||(8629-8691)
[»] scaffold0103 (1 HSPs)
scaffold0103 (261-303)||(51820-51862)
[»] scaffold0050 (1 HSPs)
scaffold0050 (261-311)||(70287-70337)
[»] scaffold0018 (1 HSPs)
scaffold0018 (255-316)||(178813-178875)
[»] scaffold0793 (1 HSPs)
scaffold0793 (270-362)||(4829-4924)
[»] scaffold0122 (1 HSPs)
scaffold0122 (255-311)||(8013-8068)
[»] scaffold0020 (1 HSPs)
scaffold0020 (261-321)||(135302-135362)
[»] scaffold0008 (1 HSPs)
scaffold0008 (261-317)||(263366-263422)
[»] scaffold0246 (1 HSPs)
scaffold0246 (252-303)||(19576-19626)
[»] scaffold0236 (1 HSPs)
scaffold0236 (261-314)||(25765-25818)
[»] scaffold0123 (1 HSPs)
scaffold0123 (264-317)||(44519-44572)
[»] scaffold0049 (2 HSPs)
scaffold0049 (261-310)||(63782-63831)
scaffold0049 (262-317)||(56932-56987)
[»] scaffold0036 (1 HSPs)
scaffold0036 (261-314)||(9744-9797)
[»] scaffold0003 (1 HSPs)
scaffold0003 (261-314)||(241603-241656)
[»] scaffold0004 (3 HSPs)
scaffold0004 (264-312)||(83172-83220)
scaffold0004 (274-310)||(123650-123686)
scaffold0004 (261-304)||(92816-92859)
[»] scaffold0086 (1 HSPs)
scaffold0086 (270-317)||(2946-2993)
[»] scaffold0083 (1 HSPs)
scaffold0083 (280-311)||(45530-45561)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-317)||(71743-71790)
[»] scaffold0722 (1 HSPs)
scaffold0722 (261-311)||(7032-7082)
[»] scaffold0066 (1 HSPs)
scaffold0066 (261-299)||(33375-33413)
[»] scaffold1528 (1 HSPs)
scaffold1528 (261-317)||(1044-1100)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 1e-73; HSPs: 75)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 109 - 253
Target Start/End: Original strand, 31378819 - 31378963
Alignment:
Q  109 gccttagcatgaaaaagctttgtcaaattgtagaatccatcatttctatagcttgtcaaacatgaaaaagcttctcaacaaaaataaaagtataaatcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31378819 gccttagcatgaaaaagctttgtcaaattgtagaatccatcatttctatagcttgtcaaacatgaaaaagcttctcaacaaaaataaaagtataaatcaa 31378918  T
Q  209 tttcatgttttggttatcgaaatataggttagcaattagaaatga 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  31378919 tttcaagttttggttatcgaaatataggttagcaattagaaatga 31378963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 10770730 - 10770664
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  10770730 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacac 10770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 16766706 - 16766762
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16766706 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 31384919 - 31384982
Alignment:
Q  251 tgatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  31384919 tgatacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 9107420 - 9107364
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  9107420 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcgg 9107364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 12696333 - 12696393
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  12696333 aataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacac 12696393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 31380253 - 31380325
Alignment:
Q  27 caagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatg 99  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||||||    
T  31380253 caagttcatatctttcaatacaggacccggaagttgtattggtaaagatcttagtttcattcaaattaagatg 31380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 34595137 - 34595193
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34595137 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 8365575 - 8365513
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  8365575 acaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcgg 8365513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 5970158 - 5970102
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  5970158 aataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcgg 5970102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 7801212 - 7801156
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  7801212 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 9522900 - 9522956
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  9522900 aataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcgg 9522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 7977880 - 7977830
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  7977880 aataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 16833311 - 16833365
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  16833311 acaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 17841639 - 17841537
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggaca-ctgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||     ||||  |||||||||  |||||||| ||||||||||||||| ||    
T  17841639 aataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtcc 17841540  T
Q  360 gtg 362  Q
    |||    
T  17841539 gtg 17841537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 28715304 - 28715354
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28715304 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 28715354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 853915 - 853859
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  853915 acaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcg 853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 8777029 - 8776973
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  8777029 acaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcg 8776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 9025544 - 9025484
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||| ||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  9025544 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacac 9025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 28152108 - 28152203
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| ||||||||| || |||| | |||||||||||||||    
T  28152108 aataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtg 28152203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 9911579 - 9911524
Alignment:
Q  261 aataatttgaaa-aaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  9911579 aataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 32978950 - 32978847
Alignment:
Q  261 aataatttgaaaaaat-caaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggc 358  Q
    |||||||||||||||  || |||||| |||||||||||||||||||||||||     ||||| ||||||||| || |||||||||||||| ||||||| |    
T  32978950 aataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtc 32978851  T
Q  359 cgtg 362  Q
    ||||    
T  32978850 cgtg 32978847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 403914 - 403864
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  403914 aataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcg 403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 426564 - 426514
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  426564 aataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcg 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 1681761 - 1681811
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  1681761 acaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 3398628 - 3398728
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||||||| ||| ||||||||||||||||| |||| |||||||||||| ||||||      ||||||||| ||  |||||||||||| ||||||    
T  3398628 aataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtccgacaccggaacacgtctaatcagaggag 3398726  T
Q  355 tg 356  Q
    ||    
T  3398727 tg 3398728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 7930314 - 7930368
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||||||| |||||| |||| |||| |||||||||||||||||||    
T  7930314 aataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtc 7930368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 7938125 - 7938174
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  7938125 aataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 8713988 - 8714045
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  8713988 aataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcgg 8714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 31959168 - 31959213
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcgg 306  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  31959168 aataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 2224235 - 2224295
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||| ||||||||| |||||||||||||||||||| | |||  ||||||||||||||    
T  2224235 aataatttaaaaaaatcatataattcagtgtaattacaaatatcgacgtcgtgtcggacac 2224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 2117085 - 2117143
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggaca 320  Q
    |||||||||||||||||| |||||||| || ||||| ||||||| |||||||||||||||    
T  2117085 aataatttgaaaaaatcacataattcaatgcaattataagtgtc-gtgtcgtgtcggaca 2117143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 356
Target Start/End: Original strand, 9629390 - 9629499
Alignment:
Q  259 ccaataatttgaaaaaatcaaataattcagtgtaattaca------agtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaat 346  Q
    |||||||||||| ||||||| |||||||| |||||||| |       ||||||||||||||||||||||      |||||||||  ||||||||||||||    
T  9629390 ccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacacaacatgtgtccgacactgagacacgtctaat 9629489  T
Q  347 ccgaggagtg 356  Q
    ||||||||||    
T  9629490 ccgaggagtg 9629499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 15489788 - 15489733
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||| |||||||||||||||| | | |||||| ||||||||||||||||||||||    
T  15489788 acaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 4877951 - 4878064
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggc 358  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||||||||||     ||||| |||||||| ||  |||||| ||||||||||||||| |    
T  4877951 aataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgac-acaggacacgcctaatccgaggagtgtc 4878049  T
Q  359 cgtgttttataggta 373  Q
    |||| || |||||||    
T  4878050 cgtgcttcataggta 4878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 6327568 - 6327518
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | |||||| ||||||||||||||||||| |||||    
T  6327568 aataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcg 6327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 6898331 - 6898281
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||| |||| | |||||| |||||||||||||||||||||||||    
T  6898331 aataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcg 6898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 7265643 - 7265593
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  7265643 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 21395357 - 21395304
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||| | |||||| |||||||||||||||||||||||||||||    
T  21395357 aataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtc 21395304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 21924985 - 21924935
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| || |||||||||||||||||||||| | ||||||||||||    
T  21924985 aataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 1700362 - 1700411
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||| ||||||||| ||| ||||||||||||| ||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcg 1700411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 17302559 - 17302620
Alignment:
Q  255 acaaccaataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||| ||||||||||||||| ||| |||||||| ||||||||||||||||  |||||||||    
T  17302559 acaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgtc 17302620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 24645489 - 24645586
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    ||||||||||||||| ||| |||||||||| || |||||||||||||||||      ||||| ||||||||| | ||||||||||||||||| |||||    
T  24645489 aataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtg 24645586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 26562701 - 26562754
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||| ||||||| ||||||||||||||||| | |||||| |||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcgg 26562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 1191750 - 1191706
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||    
T  1191750 aataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 7151421 - 7151473
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    |||||||||||||||||| |||||| |||||||||| | |||| |||||||||    
T  7151421 aataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 9027187 - 9027247
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||| | ||||| ||||||| ||||||||| | |||||||||||||||| |||||    
T  9027187 aataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacac 9027247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 34073397 - 34073341
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||  ||||||||||||||||| | | ||||||||||||||||    
T  34073397 aataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcgg 34073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 3209390 - 3209441
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||| ||| |||||| ||||| |||||||||||||||||||    
T  3209390 aataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcg 3209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 7973665 - 7973716
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||| ||||||| | |||||| |||||||||| |||||||||||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtgtcgtgt 7973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 9617443 - 9617494
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||||| ||||||| |||||||| |||||||| | |||||||||||||    
T  9617443 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 311
Target Start/End: Complemental strand, 16388248 - 16388217
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcg 16388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Complemental strand, 16388283 - 16388248
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaatta 296  Q
    |||||||||||||||||| |||||||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 17341714 - 17341671
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||    
T  17341714 aataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 34290133 - 34290048
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaat 346  Q
    ||||| |||||||||  | ||||| ||||||||||||||||  | |||||||||||||||    || ||||||||| |||||||||||||||    
T  34290133 acaactaataatttgcgagaatcacataattcagtgtaatt--atgtgtcggtgtcgtgt----cagtgtccgacaccgagacacgtctaat 34290048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 4118383 - 4118341
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  4118383 aataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 7027251 - 7027301
Alignment:
Q  262 ataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  7027251 ataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 7996428 - 7996378
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | | ||||||||||    
T  7996428 aataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 8022373 - 8022423
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | | ||||||||||    
T  8022373 aataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 17435208 - 17435250
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||| ||||||| | ||||||||||||||||||||||||    
T  17435208 aataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 18252801 - 18252747
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||||||| | |||||| |||||||||||| |||||||| |||||||    
T  18252801 aataatttaaaaaaatgacataatttagtgtaattacaggtgtcggtatcgtgtc 18252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 19040361 - 19040411
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||| ||||||    
T  19040361 aataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 19369831 - 19369881
Alignment:
Q  266 tttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||| ||||| | |||||||| |||||| |||||||||||||||||||||    
T  19369831 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgtcg 19369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 32511716 - 32511666
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| | ||||||| ||||||||||||||||| |||||| |||||||    
T  32511716 aataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 33001339 - 33001289
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| | |||||||| | ||||||||||||    
T  33001339 aataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 34197139 - 34197173
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||||||||||| |||||||||||||||||    
T  34197139 ataattcagtgtaattataagtgtcggtgtcgtgt 34197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 785486 - 785449
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  785486 ataattcaatgtaatcacaagtgtcggtgtcgtgtcgg 785449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 9195804 - 9195751
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||| | |||||| |||||||||| | |||||||||||||||    
T  9195804 aataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 26402721 - 26402680
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||| | ||||||||||||||| ||||||||||||||||    
T  26402721 aaaaaatgacataattcagtgtaatcacaagtgtcggtgtcg 26402680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 34225865 - 34225824
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaatta 296  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  34225865 acaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 7723300 - 7723244
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||| |||||||||  |||||| | || |||||||||||||||    
T  7723300 aataatttgagaaaatcatataattcagcataattatatgtatcggtgtcgtgtcgg 7723244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 20576664 - 20576628
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  20576664 ataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 25010252 - 25010212
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagt 301  Q
    |||||||||||||||||| ||||||||| || |||||||||    
T  25010252 aataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 27904077 - 27904037
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||| || |||||||||||||||||||| ||||||||||    
T  27904077 aaaaaaacacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 31429044 - 31429004
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||||||| |||||||||||||||||||| ||| ||||||    
T  31429044 aaaaaatcacataattcagtgtaattacaaatgtaggtgtc 31429004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 270 - 520
Target Start/End: Original strand, 19312353 - 19312610
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg-----------gacac-tgtccgacaacgagacacgtctaatccgaggagtgg 357  Q
    ||||||||| || |||||||||||||| |||| ||||||||||||||           ||||| ||||||||| |||||||||||||||| ||| ||||     
T  19312353 aaaaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgt 19312452  T
Q  358 ccgtgttttataggtagtatctaaaggcaatgaattgacacggcaacgaaaactaaatcat---aaagccaaggattaaaagcaatatgtcttacggcac 454  Q
    |||||||| ||         |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  19312453 ccgtgtttcat---------ctaaaggcaatgaattgacacggcaacgaaaactaaatcattataaagccaaggattaaaagcaatatgtcttacggcac 19312543  T
Q  455 cagcaacaactcatgaat-aatagtaaagaaactcaatggaaattgtatgatgtgaaacggcaattc 520  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19312544 cagcaacaactcatgaataaatagtaaagaaactcaatggaaattgtatgatgtgaaacggcaattc 19312610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 11596402 - 11596295
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtggccg 360  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||    || ||||||||| || |||||| |||||| |||||||| |||    
T  11596402 aataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt----cattgtccgacatcgggacacgcctaatctgaggagtgtccg 11596307  T
Q  361 tgttttataggt 372  Q
    || || ||||||    
T  11596306 tgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 23293036 - 23292934
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||     ||||| ||||||||| || |||||| ||||||||||||||| ||    
T  23293036 aataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtcc 23292937  T
Q  360 gtg 362  Q
    |||    
T  23292936 gtg 23292934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 3947816 - 3947756
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  3947816 aataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacac 3947756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 12895166 - 12895106
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  12895166 aataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacac 12895106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 21945512 - 21945608
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||     ||||| ||||||||| ||  ||||| |||||||||||||||    
T  21945512 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtg 21945608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 362
Target Start/End: Original strand, 28084540 - 28084635
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg--gacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||  ||||| |||||||||  | |||||| ||||||||||||||| |||||    
T  28084540 aaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtg 28084635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 29205453 - 29205501
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29205453 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 54580079 - 54580023
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  54580079 acaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 19482671 - 19482733
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||||    
T  19482671 acaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcgg 19482733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 28964298 - 28964248
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  28964298 aataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 4383368 - 4383432
Alignment:
Q  252 gatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||    
T  4383368 gatacaactaataatttgaaaaa-tcacataattcagtgtaattacaaatgtcagtgtcgtgtcgg 4383432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 6485661 - 6485613
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6485661 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 12797387 - 12797338
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  12797387 aataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 24613757 - 24613695
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||||| ||||||    
T  24613757 acaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcgg 24613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 38847062 - 38847012
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  38847062 aataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcg 38847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 12708165 - 12708210
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  12708165 aaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgtc 12708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 16303316 - 16303263
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  16303316 aatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 30298955 - 30299008
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  30298955 aataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 30327823 - 30327876
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  30327823 aataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 42640547 - 42640588
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 715648 - 715553
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt--cggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||    ||||| |||||||||  | |||||| ||||||||||||||| |||||    
T  715648 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtg 715553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 752974 - 752879
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt--cggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||    ||||| |||||||||  | |||||| ||||||||||||||| |||||    
T  752974 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtg 752879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 30982924 - 30982872
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 51701267 - 51701323
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||| | |||||| |||||||||||||||||  ||||||||||||    
T  51701267 aataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcgg 51701323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 28000793 - 28000738
Alignment:
Q  261 aataatttgaaaa-aatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  28000793 aataattttaaaataatcatataattcagtgtaattacaagtgtcggtgtcatgtc 28000738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 34306859 - 34306761
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||||||||||||||     ||||| ||||||||| ||||||||| |||||| |||||    
T  34306859 acaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgagga 34306761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 40481637 - 40481687
Alignment:
Q  252 gatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  40481637 gatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 49431034 - 49431085
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  49431034 aataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcg 49431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 2362025 - 2361975
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | |||||| |||||||||| ||||||||||||||    
T  2362025 aataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 8423768 - 8423718
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| || |||||||||||    
T  8423768 aataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 12895324 - 12895274
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  12895324 aataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 16073404 - 16073453
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  16073404 aataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtcg 16073453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 35158040 - 35157986
Alignment:
Q  256 caaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||| ||||||||| |||||||| |||||| |||||||||| |||||||||||||    
T  35158040 caactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 6879510 - 6879465
Alignment:
Q  266 tttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||    
T  6879510 tttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 6879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 27706227 - 27706174
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||| ||||||||| |||||| |||||||||||||||||  |||||||||    
T  27706227 aataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgt 27706174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 4157153 - 4157208
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||| ||| |||||| |||| ||||||||||||||||||||    
T  4157153 acaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtcg 4157208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 5775408 - 5775353
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||| ||||||| |||||| |||||||||| | ||||||||||| |||||    
T  5775408 aataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcg 5775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 22234931 - 22234884
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||||||||||||  | ||||||||||||||||||    
T  22234931 aaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcgg 22234884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 31800528 - 31800477
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||| ||||||| |||||||| | ||||||||||||||||||| ||||    
T  31800528 aataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 4157455 - 4157541
Alignment:
Q  271 aaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||| |||||| |||| ||||||||||||||||||||     ||||| ||||||||| ||||| ||| ||||| |||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtg 4157541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 15029774 - 15029824
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||| |||| ||||||||||||||||| | |||| |||||||    
T  15029774 aataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 15659810 - 15659752
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggac 319  Q
    |||||||||| ||||||  ||||||| ||||||||| | |||| |||||||||||||||    
T  15659810 aataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 30838219 - 30838273
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||| | |||||| |||||||||| |||| |||||||||||||    
T  30838219 aataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtc 30838273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 32273582 - 32273516
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| |||||||||||||||| | |||||||||  |||||| |||| ||| ||||| |||||||||    
T  32273582 acaactaataatttgaaaaaataacataattcagaataattataagtttcgatgtcgagtcggacac 32273516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 37203273 - 37203315
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||||||||||| | |||||| |||||||||||||||||    
T  37203273 aataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 40179686 - 40179636
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||| ||||||||||||| ||||||||||||||||| | | ||||||||||    
T  40179686 aatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcg 40179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 50280890 - 50280947
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgt--aattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||||||| ||| |||||| |||||  ||||||||||| |||||||||||||    
T  50280890 aataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgtgtcg 50280947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 847960 - 848009
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||| | |||||||| | ||||||||||||||||||||    
T  847960 aataatttgagaaaattacataattcactataattacaagtgtcggtgtc 848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 298
Target Start/End: Complemental strand, 14465125 - 14465088
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattaca 298  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  14465125 aataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 47263995 - 47264044
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||||||| |||||||| ||||||| |||||||||||| ||||| ||||    
T  47263995 aataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtc 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 40742600 - 40742656
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||| |||||  |||||||||| | |||||| |||||||||||    
T  40742600 aataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcgg 40742656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30368264 - 30368376
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30368264 ggacacattatacatgtaccatcttacaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 30368363  T
Q  101 ttgcagctgcctt 113  Q
    |||||||||||||    
T  30368364 ttgcagctgcctt 30368376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13204495 - 13204386
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13204495 ggacacattatacatgtaccatcttacaagttcatagctttcaatacaggtcctagaagttgtttgggtaaagatcttagtttcattcaaatgaagatgg 13204396  T
Q  101 ttgcagctgc 110  Q
    | ||||||||    
T  13204395 tcgcagctgc 13204386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13070332 - 13070441
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||    
T  13070332 ggacacattatacatgttccatcttacaagttcatagctttcaatacaggtccgagaagttgtttgggtaaagatcttagtttcattcaaatgaagatgg 13070431  T
Q  101 ttgcagctgc 110  Q
    | ||||||||    
T  13070432 tcgcagctgc 13070441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13101036 - 13100928
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  13101036 ggacacattatacatgtaccatcttacaagttcatagctttcaat-caggacctagaagttgtatgggtaaggatattagcttcattcaaatgaagatgg 13100938  T
Q  101 ttgcagctgc 110  Q
    | ||||||||    
T  13100937 tcgcagctgc 13100928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13007236 - 13007130
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || ||| |||| ||| |||||||||||||||    
T  13007236 ggacacattatacatgtaccatcttacaagttcatagctttcaatacaggtcctagaagttgtatgggcaaggatattagcttcattcaaatgaagatgg 13007137  T
Q  101 ttgcagc 107  Q
    | |||||    
T  13007136 tcgcagc 13007130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 13244683 - 13244784
Alignment:
Q  7 attataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcag 106  Q
    |||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| ||||||||||    
T  13244683 attataaatgtaccgtcttacaagttcatagctttcaatgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcag 13244782  T
Q  107 ct 108  Q
    ||    
T  13244783 ct 13244784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 13094429 - 13094326
Alignment:
Q  7 attataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcag 106  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||| |||| |||||| ||||||||| |||||||| |||||||||||||||| ||||    
T  13094429 attatacatgtaccatcttacaagttcatagctttcaacacaggacccagaatttgtataggtaaagatattagtttcattcaaatgaagatggtcgcag 13094330  T
Q  107 ctgc 110  Q
    ||||    
T  13094329 ctgc 13094326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 13129858 - 13129755
Alignment:
Q  7 attataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcag 106  Q
    |||||| |||||||||||| ||||||| |||||||||| |||||||| |||| |||||| |||||||||||||||||| |||||||||||||||| ||||    
T  13129858 attatacatgtaccatcttacaagttcgtagctttcaacacaggacccagaatttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcag 13129759  T
Q  107 ctgc 110  Q
    ||||    
T  13129758 ctgc 13129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 13161551 - 13161448
Alignment:
Q  7 attataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcag 106  Q
    |||||| ||||||| |||| |||||||||| ||||||| |||||||| |||| |||||| |||||||||||||||||| |||||||||||||||| ||||    
T  13161551 attatacatgtaccttcttacaagttcatatctttcaacacaggacccagaatttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcag 13161452  T
Q  107 ctgc 110  Q
    ||||    
T  13161451 ctgc 13161448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 1486759 - 1486658
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||      ||||||||| || |||||| |||||||||||||    
T  1486759 aataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggag 1486660  T
Q  355 tg 356  Q
    ||    
T  1486659 tg 1486658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 379 - 477
Target Start/End: Original strand, 27775272 - 27775371
Alignment:
Q  379 taaaggcaatgaattgacacggcaacgaaaactaaatcataaagccaaggatt-aaaagcaatatgtcttacggcaccagcaacaactcatgaataatag 477  Q
    ||||||||||||||| ||||||||| ||| ||||||||| ||||| ||||| | ||||||||||||||||||||||||||||| | | ||||||||||||    
T  27775272 taaaggcaatgaatttacacggcaatgaacactaaatcaaaaagctaaggaatcaaaagcaatatgtcttacggcaccagcaatagcacatgaataatag 27775371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 1705042 - 1704949
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |   ||||||||| ||||||||| ||||||| |||||||    
T  1705042 aataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc--aacgtgtccgacaccgagacacgcctaatccaaggagtg 1704949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 24577242 - 24577182
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24577242 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 113308 - 113398
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||     ||||| ||| || |||||| |||||||||||||||    
T  113308 aataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg-----tgtccaacaccgggacacgcctaatccgaggagtg 113398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 22515937 - 22515835
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||     ||||| | ||||||| ||||||||| ||||||||||||||| ||    
T  22515937 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtcc 22515838  T
Q  360 gtg 362  Q
    |||    
T  22515837 gtg 22515835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 18337336 - 18337388
Alignment:
Q  259 ccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18337336 ccaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 47989506 - 47989562
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47989506 aataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 47989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 6612221 - 6612166
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  6612221 aataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcg 6612166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13065369 - 13065468
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    ||||| |||||| ||||||| |||| ||||||||||||||||||| |||| || ||||||||| ||||||||||| | |  |||||| ||||||||||||    
T  13065369 ggacaaattatacatgtaccgtcttacaagttcatagctttcaatgcagggccaagaagttgtttgggtaaagatatcaccttcgttgaaatgaagatgg 13065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13271622 - 13271515
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    ||||| |||||| |||||||||||| |||||||||||| |||||| |||| |||||||| ||| | || |||||| |||| ||  |||||||||| ||||    
T  13271622 ggacaaattatacatgtaccatcttacaagttcatagcattcaatgcaggtcctagaagctgtcttgggaaagatattagctttattcaaatgaaaatgg 13271523  T
Q  101 ttgcagct 108  Q
    ||||||||    
T  13271522 ttgcagct 13271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 46348433 - 46348331
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||     ||||| ||||||||| ||||||||| || |||||||| ||| ||    
T  46348433 aataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtcc 46348334  T
Q  360 gtg 362  Q
    |||    
T  46348333 gtg 46348331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 372
Target Start/End: Complemental strand, 22881672 - 22881565
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggag 354  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||     ||||||||     ||||| || ||||||||||||||||||||    
T  22881672 acaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt-----gtcggaca-----cgacaccgggacacgtctaatccgaggag 22881583  T
Q  355 tggccgtgttttataggt 372  Q
    || ||||| || ||||||    
T  22881582 tgtccgtgcttcataggt 22881565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 37598835 - 37598951
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||     ||||| |||||||||| | |||||| ||||||||||||    
T  37598835 acaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgagga 37598933  T
Q  354 gtggccgtgttttatagg 371  Q
    ||| ||||| || |||||    
T  37598934 gtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 40258983 - 40258934
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40258983 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 28273144 - 28273089
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28273144 acaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 38078711 - 38078661
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38078711 aataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 42359499 - 42359449
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  42359499 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 12964049 - 12964134
Alignment:
Q  19 ccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgc 104  Q
    |||||||  ||||||||||| |||||| |||| |||||||||||||| || |||||| |||| || ||||||||||| ||||||||    
T  12964049 ccatcttataagttcatagcattcaatgcaggtcctagaagttgtattgggaaagatattagctttgttcaaatgaaaatggttgc 12964134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19279324 - 19279433
Alignment:
Q  1 ggacacattataaatgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatgg 100  Q
    ||||| |||||| |||||||||| | |||||||||||| || ||| |||| || ||||| ||| | || |||||| ||| |||| |||||||||| ||||    
T  19279324 ggacaaattatacatgtaccatcgtacaagttcatagcgtttaatgcaggtccgagaagctgtctcggaaaagatattactttccttcaaatgaaaatgg 19279423  T
Q  101 ttgcagctgc 110  Q
    ||||||||||    
T  19279424 ttgcagctgc 19279433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 5898316 - 5898204
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||| ||||||||||| ||||||||||||||||| | | |||||||||      ||||| ||||| ||| || |||||||||||||||||||||| ||    
T  5898316 aataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtcc 5898217  T
Q  360 gtgttttataggt 372  Q
    ||| |||||||||    
T  5898216 gtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13086130 - 13086034
Alignment:
Q  14 atgtaccatcttccaagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcagctgc 110  Q
    |||||||||||| |||||||||||| || ||| |||| ||| |||||||| | || |||||| ||||  | ||||||||||| ||||||||||||||    
T  13086130 atgtaccatcttgcaagttcatagcatttaatgcaggtcctcgaagttgtcttgggaaagatattagcattgttcaaatgaaaatggttgcagctgc 13086034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 51410033 - 51410129
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagt 355  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| | ||||||| ||||||||| ||||||| ||||||    
T  51410033 aataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagt 51410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 1815270 - 1815377
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtgt 363  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||      ||||| ||||||||| || |||||| |||||| |||||||| |||||     
T  1815270 attttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtga 1815369  T
Q  364 tttatagg 371  Q
    || |||||    
T  1815370 ttcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 6332674 - 6332732
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  6332674 acaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtcgtgt 6332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 9629950 - 9629895
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||| ||||||| |||||||||||| |||| |||||||||||||||||||    
T  9629950 aataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcg 9629895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 31694751 - 31694704
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  31694751 aaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcgg 31694704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 35919317 - 35919266
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcggacac 35919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 44482240 - 44482295
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 5944301 - 5944347
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  5944301 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcg 5944347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 17778558 - 17778611
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||   ||||||||||||||||||||||||||||||||    
T  17778558 aataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcgtgtcgg 17778611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 31672945 - 31672895
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  31672945 aataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcg 31672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 34712433 - 34712331
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||| ||||| | |||||| |||||||||| | ||||| |||||||||||||||| ||||| |||  | |||||||||||| | ||||||| ||    
T  34712433 aataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtcc 34712334  T
Q  360 gtg 362  Q
    |||    
T  34712333 gtg 34712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 18190158 - 18190109
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  18190158 aataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 31015052 - 31015097
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcgg 306  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  31015052 aataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 21378587 - 21378635
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  21378587 aataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 5376550 - 5376495
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||| | ||||| | ||||||||||||||||| |||||||||||||||||||    
T  5376550 aataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcg 5376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 25361896 - 25361951
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcgg 25361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 2218267 - 2218309
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcgtgtcggacact 322  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  2218267 ataatttagtgtaattacaagtgtcggtgtcgtgtccgacact 2218309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 5927390 - 5927340
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  5927390 aataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 7918261 - 7918207
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||| ||||||||||    
T  7918261 aataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 9828053 - 9828107
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| ||||||||||||||||  | ||||||||||||||||    
T  9828053 aataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtc 9828107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 377
Target Start/End: Original strand, 15323172 - 15323294
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg-----gacac-tgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||||||||||| |||||| |||||||||  ||||||| || |||||| |     ||||| ||||||||| ||| ||||  |||||||||||||    
T  15323172 aataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttggatatgacacgtgtccgacaccgaaacacacctaatccgaggag 15323271  T
Q  355 tggccgtgttttataggtagtat 377  Q
    || | |||||| |||| ||||||    
T  15323272 tgtcagtgtttcatagctagtat 15323294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 19058906 - 19058856
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| |||| || | ||||||||||||||||||||||||||||||||    
T  19058906 aataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||| ||||||| |||||| |||||||||| |||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 32434772 - 32434718
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    ||||| |||||||||||||| ||| |||||||| |||||||||||||||| ||||    
T  32434772 acaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 32461519 - 32461465
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    ||||| |||||||||||||||||| |||||| | ||||||||||||||| |||||    
T  32461519 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 35702638 - 35702588
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||  |||||||||| |||||||||||||||||| ||||||    
T  35702638 aataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcg 35702588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 41877520 - 41877470
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||| | |||||| |||||||||||||||||||||||||    
T  41877520 aataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 21366038 - 21365985
Alignment:
Q  324 tccgacaacgagacacgtctaatccgaggagtggccgtgttttataggtagtat 377  Q
    ||||||| ||||||||| ||||||||||||||| ||||| || |||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcataggtagtat 21365985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 30173803 - 30173758
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||    
T  30173803 aaaaaattacataactcagtgtaattacaagtgtcggtgtcgtgtc 30173758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 36878470 - 36878519
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||||| ||||||||||||||||| | |||||||||||    
T  36878470 aataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 40917760 - 40917814
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |  ||| ||||||||||||||| |||||||||||||||    
T  40917760 aataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcgg 40917814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 48450637 - 48450592
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcgg 306  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||    
T  48450637 aataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 1864930 - 1864882
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||||    
T  1864930 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 8010337 - 8010281
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||| | |||||||||| |||||| |||||||| ||| |||||||    
T  8010337 aataatttgaaaaaattatataattcagtataattataagtgtcgatgttgtgtcgg 8010281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 20157400 - 20157340
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||| ||| ||||||| ||||||||||||||| | | |||||||||||||||| |||||    
T  20157400 aataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacac 20157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 38503329 - 38503385
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||| ||| ||||||||||||| | ||||||||||| ||||||    
T  38503329 aataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Complemental strand, 398815 - 398780
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaatta 296  Q
    |||||||||||||||||| |||||||||||||||||    
T  398815 aataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 2283667 - 2283726
Alignment:
Q  253 atacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||  ||||||||||||||||| || ||||| |||||||| |||||| ||||||||    
T  2283667 atacaacttataatttgaaaaaatcacatgattcaatgtaattataagtgttggtgtcgt 2283726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Complemental strand, 16927235 - 16927200
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaatta 296  Q
    |||||||||||||||||| |||||||||||||||||    
T  16927235 aataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 311
Target Start/End: Complemental strand, 24334736 - 24334705
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||||||||||||||||||    
T  24334736 ataattcagtgtaattacaagtgtcggtgtcg 24334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 34371728 - 34371775
Alignment:
Q  267 ttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 6427359 - 6427413
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| |||||||| |||||||| | |||| |||||||||||    
T  6427359 aataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 9103649 - 9103698
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| ||| ||| |||||||||||||||||    
T  9103649 aataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtcg 9103698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 9828126 - 9828176
Alignment:
Q  322 tgtccgacaacgagacacgtctaatccgaggagtggccgtgttttataggt 372  Q
    ||||||||| || |||||||||||||||||||||| ||||| || ||||||    
T  9828126 tgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 11605985 - 11605943
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||    
T  11605985 aataatttgaaaaaatcatataattcagtgaaattacatgtgt 11605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 13081048 - 13081130
Alignment:
Q  28 aagttcatagctttcaatacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcagctgc 110  Q
    ||||||||||| || ||| |||| || ||||| ||| | || |||||| |||||||  |||||||||| ||||||||||||||    
T  13081048 aagttcatagcgtttaatgcaggtccaagaagctgtcttgggaaagatattagttttcttcaaatgaaaatggttgcagctgc 13081130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 15449272 - 15449226
Alignment:
Q  271 aaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| |||||| |||||||||||||||||| ||||||| ||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcgg 15449226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 312
Target Start/End: Original strand, 28663626 - 28663668
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  28663626 aaaaaatcacataattctatgtaattacaagtgtcggtgtcgt 28663668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 40181880 - 40181930
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | || |||||||||    
T  40181880 aataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 52903258 - 52903308
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| | ||||||| ||||||||||||||||| | ||||||||||||    
T  52903258 aataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 18471318 - 18471355
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggt 307  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  18471318 aaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 21620973 - 21621014
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||    
T  21620973 aaaaaatcacataattcagtgtatttacaagcgtcggtgtcg 21621014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 27471616 - 27471567
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| |||| || ||||||||||||||||||| |||| ||||||    
T  27471616 aataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 6427464 - 6427526
Alignment:
Q  255 acaaccaataatttg---aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| |||||||||   ||||||||| |||||||| ||||| |||||||||| |||||||||    
T  6427464 acaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgt 6427526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 13997896 - 13997940
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||| ||||||||| ||||||||||||||||| | ||||||||||    
T  13997896 atttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 17754320 - 17754376
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||| | |||||||||||||| || | ||||| |||| |||||||    
T  17754320 aataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 17754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 18556506 - 18556454
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    ||||||||||||| |||| |||||| | ||||||||||||| | |||||||||    
T  18556506 aataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtg 18556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 23738687 - 23738735
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||||||||||| ||||||||||| ||||| | |||| |||||    
T  23738687 aataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 48148078 - 48148034
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||| ||||||||||||||||| |  ||||||||||||||    
T  48148078 aaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 372
Target Start/End: Complemental strand, 5409896 - 5409769
Alignment:
Q  251 tgatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtcta 344  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||      ||||||||| || |||||| |||    
T  5409896 tgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgccta 5409797  T
Q  345 atccgaggagtggccgtgttttataggt 372  Q
    |||||||||||| ||||| || ||||||    
T  5409796 atccgaggagtgtccgtgcttcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 9778510 - 9778626
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggagt 355  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||      ||||||||| || |||||| ||||||| ||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagt 9778609  T
Q  356 ggccgtgttttataggt 372  Q
    | ||||| || ||||||    
T  9778610 gtccgtgcttcataggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 24339651 - 24339707
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24339651 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 7058425 - 7058490
Alignment:
Q  251 tgatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  7058425 tgatacaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtcg 7058490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 26033511 - 26033455
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  26033511 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcgg 26033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 43027519 - 43027412
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||      ||||||||| || |||||| ||||||||| |||    
T  43027519 aataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgag 43027420  T
Q  355 tggccgtg 362  Q
    || |||||    
T  43027419 tgtccgtg 43027412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 32094077 - 32094010
Alignment:
Q  255 acaaccaataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  32094077 acaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacac 32094010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 3991327 - 3991384
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3991327 acaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 5548686 - 5548747
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactg 323  Q
    ||||||||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggacactg 5548747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 18039007 - 18039064
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  18039007 aataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 18039064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 23922811 - 23922876
Alignment:
Q  188 aaaaataaaagtataaatcaatttcatgttttggttatcgaaatataggttagcaattagaaatga 253  Q
    ||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  23922811 aaaaaaaaaagtacaaatcaatttcaagttttggttatcaaaatataggttagcaattggaaatga 23922876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 7438715 - 7438771
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  7438715 aataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcgg 7438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 9408384 - 9408328
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  9408384 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 11890969 - 11890909
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  11890969 aataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtcggacac 11890909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 13770700 - 13770760
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||| ||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  13770700 aataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 18215236 - 18215176
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||    
T  18215236 aataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacac 18215176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 371
Target Start/End: Original strand, 15680818 - 15680929
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||  ||||||||| |||||| |||||||||| ||||||||||||||     ||||| ||||||||| ||||||||||||||| ||||||||| ||    
T  15680818 aataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtcc 15680917  T
Q  360 gtgttttatagg 371  Q
    ||| || |||||    
T  15680918 gtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 11272637 - 11272580
Alignment:
Q  262 ataatttgaaaaaatcaaata--attcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcgg 11272580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 25481911 - 25481961
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  25481911 aataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 27945050 - 27945104
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  27945050 aataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 2334268 - 2334379
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcg-----gtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggagtggc 358  Q
    ||||||||| |||||| |||||||||||||||||||     ||||||||||||||||      |||||||||  || ||||||||||||||||||||| |    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtcgtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtc 2334367  T
Q  359 cgtgttttatag 370  Q
    ||||||| ||||    
T  2334368 cgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 13300419 - 13300475
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||||    
T  13300419 aataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtcatgtcgg 13300475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 40287412 - 40287310
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||     || |||||||| ||||||||| || |||| | ||||||||||||    
T  40287412 acaacgaataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcg-----gtatcggacacatgtccgacaccgggacatgcctaatccgagga 40287319  T
Q  354 gtggccgtg 362  Q
    ||| |||||    
T  40287318 gtgtccgtg 40287310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 21560521 - 21560568
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcgg 21560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 8234149 - 8234243
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatcc 348  Q
    ||||| |||||||||||||||| | ||||||||||||| ||||||||| ||||||||     ||||| ||||||||| ||||||||| |||||||    
T  8234149 acaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 11665496 - 11665434
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||||||||||||| |||||||||| |||||| |||||||| |||| ||||||    
T  11665496 acaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcgg 11665434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 20549800 - 20549902
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||| |||||||  |||||||||||||||| | ||||||||||||      |||| |||||||||| |||||||| ||||||||||||||| ||    
T  20549800 aataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgccc 20549899  T
Q  360 gtg 362  Q
    |||    
T  20549900 gtg 20549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 21880161 - 21880211
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  21880161 aataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 11061126 - 11061077
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  11061126 aataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 1433463 - 1433570
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggaca------ctgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||| ||||||| || |||  ||||||||| | |||||||||||||||||||||       ||||||||| |  ||||||||||||||||||||    
T  1433463 aataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggag 1433562  T
Q  355 tggccgtg 362  Q
    || |||||    
T  1433563 tgtccgtg 1433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 16341505 - 16341565
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||| ||||||| |||||| |||||||||| | ||| ||||||||||||||||||    
T  16341505 aataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggacac 16341565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 19992010 - 19992061
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||||||||||    
T  19992010 aataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 21864826 - 21864913
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    ||||||||| |||||| ||||||||||||||||||| |||||     ||||| ||||||||| || |||||||||||| |||||||||    
T  21864826 aaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtg 21864913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 22602756 - 22602705
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 7197347 - 7197297
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||||||    
T  7197347 aataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcg 7197297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 11831435 - 11831481
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagt 301  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||    
T  11831435 acaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 19213812 - 19213862
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  19213812 aataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 19213862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 25822658 - 25822720
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||||||||||    | ||||||||||||||||||||||||||||||| ||||    
T  25822658 acaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcgg 25822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 28155579 - 28155629
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  28155579 aataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 33994223 - 33994333
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgt 361  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||||||      ||||| ||||| ||| ||||||||| ||||||| |||||||  |||    
T  33994223 taatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgt 33994322  T
Q  362 gttttataggt 372  Q
    |||| ||||||    
T  33994323 gtttcataggt 33994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 35861967 - 35862024
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||| |||||||||||||||||| |||||||| |||||||  ||||||| |||||||    
T  35861967 acaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 1885587 - 1885635
Alignment:
Q  266 tttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||||| | |||||||| |||||| |||||||||||||||||||    
T  1885587 tttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgt 1885635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 32308129 - 32308185
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||| ||||||||||||||||  | ||||| ||||||||||||    
T  32308129 aataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcgg 32308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  266 tttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 7328741 - 7328686
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||| ||||| | |||||| |||||||||| | |||||||||||||||||    
T  7328741 aataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 12843226 - 12843171
Alignment:
Q  260 caataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||||||||| ||||| | |||||||| |||||||||| ||||| ||||||||||    
T  12843226 caataatttgataaaattacataattcaatgtaattacatgtgtcagtgtcgtgtc 12843171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 6028634 - 6028688
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||||||||||| || | |||||| | ||||||||||| |||||||||||||||    
T  6028634 aataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtc 6028688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| ||||| | ||||||||||||||||| | |||| |||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 18013124 - 18013070
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||||||| | ||||||||||||||||| | ||||| ||||||||||    
T  18013124 aataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 24105687 - 24105737
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||   || |||||||||||||||||||||||| ||||    
T  24105687 aataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcg 24105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 26733313 - 26733363
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| |||||||||| |||||| | ||||||||||||    
T  26733313 aataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 1401034 - 1401083
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||| ||| ||||||||||||||||| |||| ||||||||    
T  1401034 aataatttgagaaactcacataattcagtgtaattataagtatcggtgtc 1401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 9482944 - 9482993
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||| ||||||| | ||||||||||||||| | ||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 7758331 - 7758391
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||| | ||||| | |||||||||| ||||||   ||||||||||||||||||||||    
T  7758331 aataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcggacac 7758391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtg 302  Q
    ||||||||| |||||||||||||||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 26329432 - 26329376
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| |||| || | ||||||||||||||| | ||||||| ||||||||||    
T  26329432 aataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcgg 26329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 55401078 - 55401186
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||     ||||| ||||||||| ||||||||| ||||||||||||    
T  55401078 acaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgagga 55401177  T
Q  354 gtggccgtg 362  Q
    ||| |||||    
T  55401178 gtgtccgtg 55401186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 49651836 - 49651778
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggac 319  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  49651836 aataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 25948937 - 25948877
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  25948937 aataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacac 25948877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 28918010 - 28918062
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28918010 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 34910320 - 34910428
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtc-cgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||   | | |  |||| || |||||||||||||||||||    
T  34910320 acaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacaccgggacacgtctaatccgagga 34910419  T
Q  354 gtggccgtg 362  Q
    ||| |||||    
T  34910420 gtgtccgtg 34910428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 1509548 - 1509639
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    ||||||||| ||  ||||| |||||| ||||||||    
T  1509548 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcgg----tgtccgacaccggtacacgcctaatcggaggagtg 1509639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 14209116 - 14209178
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  14209116 acaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 14209178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 10954955 - 10955056
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||     ||||| |||||||||  | |||||| ||||||||||||    
T  10954955 acaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 10955054  T
Q  354 gt 355  Q
    ||    
T  10955055 gt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 15796344 - 15796291
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  15796344 aataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgt 15796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 4987341 - 4987285
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  4987341 aataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcgg 4987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 20503468 - 20503576
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |     ||||| |||| |||| || |||||| ||||||||||||    
T  20503468 acaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgagga 20503567  T
Q  354 gtggccgtg 362  Q
    ||| |||||    
T  20503568 gtgtccgtg 20503576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 27505255 - 27505362
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggag 354  Q
    ||||||||  |||||||| |||||| ||||||||||||||||||||||||||||| |||||      ||||||||| || |||| | |||||||||||||    
T  27505255 aataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggag 27505354  T
Q  355 tggccgtg 362  Q
    || |||||    
T  27505355 tgtccgtg 27505362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 3164075 - 3163985
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||||||||||||| ||||||||||||||  |||||||| | ||||||||||     ||||||||| ||||||||| ||||| |||||||||    
T  3164075 aataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtcg-----tgtccgacaccgagacacgcctaattcgaggagtg 3163985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 26508119 - 26508166
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtg 308  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  26508119 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 28812518 - 28812577
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  28812518 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 28812577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 34185173 - 34185119
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  34185173 aataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtc 34185119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 41961706 - 41961644
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||    
T  41961706 acaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcgg 41961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 51206403 - 51206353
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  51206403 aataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 14832099 - 14832164
Alignment:
Q  252 gatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||| | |||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||    
T  14832099 gatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcgg 14832164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 21479127 - 21479188
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc-gtgtcggacac 321  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||| |||||||||||    
T  21479127 aataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcggacac 21479188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 26492255 - 26492162
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||     ||||| |||| |||| | ||||||||||||||||||||    
T  26492255 aataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgagga 26492162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 8587069 - 8587021
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 21257036 - 21256984
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  21257036 aataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtg 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 14216895 - 14216954
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||||||| |||||||||    
T  14216895 acaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14216954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 14223024 - 14223083
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||||||| |||||||||    
T  14223024 acaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14223083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 25775517 - 25775568
Alignment:
Q  261 aataatttgaaaa-aatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  25775517 aataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 750674 - 750612
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| |||||||  || ||||||||||||||||||||||||||    
T  750674 acaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcgg 750612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 7928459 - 7928509
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  7928459 aataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 8383266 - 8383316
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  8383266 aataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 16789021 - 16789075
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  16789021 aataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtc 16789075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 10268536 - 10268487
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  10268536 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 17005669 - 17005616
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||| ||||    
T  17005669 aataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgt 17005616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 8039885 - 8039829
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||| | ||||||||||||||||| | ||||||||||||||||||    
T  8039885 aataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcgg 8039829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 14829699 - 14829754
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||    
T  14829699 aataatttgaaaaa-tcacataattcatggtaattacaagtgtcggtgtcgtgtcgg 14829754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 16000072 - 16000016
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||| ||||||| | |||||||||||||| |||||||||||||||||    
T  16000072 acaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg 16000016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 40993376 - 40993272
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtgttttat 368  Q
    ||||||||| ||||||||||||||||| | ||||||||||||     ||||| ||||||||| || |||||| ||||||||||||||| || || || ||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcat 40993277  T
Q  369 aggta 373  Q
    |||||    
T  40993276 aggta 40993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 8593154 - 8593196
Alignment:
Q  269 gaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  8593154 gaaaaaatcacataattcagtataattacaagtgtcggtgtcg 8593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 29508444 - 29508514
Alignment:
Q  252 gatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtg-tcgtgtcggacac 321  Q
    ||||| || |||||||||||||||||| ||||||||||||||||| | |||||| || | |||||||||||    
T  29508444 gataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacac 29508514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 39756245 - 39756299
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| ||||||||| |||||| | | |||||||||||||||||||||||||    
T  39756245 aataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgtc 39756299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 4991017 - 4990964
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||| ||||| ||||| | ||||||||||||||||||||||||||| |||||||    
T  4991017 aatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgt 4990964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 8789599 - 8789496
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac---tgtccgacaacgagacacgtctaatccgaggagtggc 358  Q
    ||||||||| ||||||| ||||||| ||||||||| | ||||||||||||     |||||   |||| |||| ||||||||| ||||||||||||||| |    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtc 8789500  T
Q  359 cgtg 362  Q
    ||||    
T  8789499 cgtg 8789496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 9800049 - 9800105
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||| | ||||||| ||||||||  ||||||||||||||||||||    
T  9800049 aataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcgg 9800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 10335342 - 10335286
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||| ||| ||| || ||||||| |||||||||||||||||    
T  10335342 acaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 10335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 14747570 - 14747655
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccg 349  Q
    ||||||||||||||| ||| |||||| |||||||||||||| ||| |||||||||| |    | ||||||| ||||||||| ||||||||    
T  14747570 aataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtctg----tatccgacaccgagacacgcctaatccg 14747655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 35994787 - 35994744
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  35994787 aataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 55212972 - 55213020
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||||||    
T  55212972 aataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 11610530 - 11610573
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||    
T  11610530 aataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 15314924 - 15314873
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||||||||| |||||| |||||||||| | |||| ||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 1550149 - 1550203
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||||||| |  |||||||||||||| | ||||| ||||||||||    
T  1550149 aataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtc 1550203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 3865690 - 3865732
Alignment:
Q  268 tgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||    
T  3865690 tgaaaaactcacataattcagtataattacaagtgtcggtgtc 3865732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 7171520 - 7171606
Alignment:
Q  271 aaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||||| ||||||| |||||||||||||||| |||||||     ||||| ||||||||| || |||||| ||||||| |||||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtg 7171606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 11155064 - 11155098
Alignment:
Q  287 agtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||||||||| |||||||||||||||||||    
T  11155064 agtgtaattacaagtatcggtgtcgtgtcggacac 11155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 295
Target Start/End: Original strand, 14979190 - 14979224
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaatt 295  Q
    |||||||||||||||||| ||||||||||||||||    
T  14979190 aataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 370
Target Start/End: Original strand, 18426958 - 18427068
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||| ||||||||| ||||||| ||||||||| |  |||||||||||  |  ||||| |||||| || || |||||  |||||| |||||||| ||    
T  18426958 aataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtcc 18427057  T
Q  360 gtgttttatag 370  Q
    |||||| ||||    
T  18427058 gtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 38731227 - 38731277
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| ||||||||| ||||||||||||| ||| | ||||||||||||    
T  38731227 aataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 11665953 - 11666006
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||||| | |||| |||||||||| | |||||||||||||||    
T  11665953 aataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgt 11666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 362
Target Start/End: Original strand, 17276742 - 17276838
Alignment:
Q  269 gaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg--gacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||| || ||||||  || |||||||||||||| |||||||||||  ||||| ||||||||| |||||| |  |||||||||| |||| |||||    
T  17276742 gaaaaaaacacataatttggtataattacaagtgtcagtgtcgtgtcggtgacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtg 17276838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 34307830 - 34307770
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc-gtgtcggacac 321  Q
    |||||||||| ||||||| ||| ||||||||||||| ||||||| ||||| |||||||||||    
T  34307830 aataatttgagaaaatcacatatttcagtgtaattataagtgtc-gtgtcggtgtcggacac 34307770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 16192800 - 16192744
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||| | ||||||||||||||||| | |||| | |||||||||||    
T  16192800 aataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 22774120 - 22774064
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||| || ||| ||| ||| ||||||||||||| ||||||||||||| ||||||    
T  22774120 aataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtcatgtcgg 22774064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 48353791 - 48353731
Alignment:
Q  251 tgatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||| || |||||||||| |||||||||||||| | |||||||| | || |||||||||    
T  48353791 tgataccactaataatttgagaaaatcaaataattaattgtaattatatgtatcggtgtcg 48353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 371 - 477
Target Start/End: Complemental strand, 40578270 - 40578163
Alignment:
Q  371 gtagtatctaaaggcaatgaattgacacggcaacgaaaactaaatcataaagccaaggatt-aaaagcaatatgtcttacggcaccagcaacaactcatg 469  Q
    ||||| ||||||||||||||||| ||||||||| ||| ||||||||| ||||| | ||| | ||||||||||||||||||||||||||||| | | ||||    
T  40578270 gtagtttctaaaggcaatgaatttacacggcaatgaacactaaatcaaaaagctatggaatcaaaagcaatatgtcttacggcaccagcaatagcacatg 40578171  T
Q  470 aataatag 477  Q
    ||||||||    
T  40578170 aataatag 40578163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 31084332 - 31084392
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  31084332 aataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacac 31084392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 39698550 - 39698606
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  39698550 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 39698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 6247631 - 6247681
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6247631 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 13287449 - 13287395
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13287449 aataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 21191106 - 21191056
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21191106 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 21351961 - 21351858
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggag 354  Q
    ||||| ||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||    |||||||||  |  ||||||||||||||| |||    
T  21351961 acaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcgg----tgtccgacactggaacacgtctaatccgaagag 21351866  T
Q  355 tggccgtg 362  Q
    || |||||    
T  21351865 tgtccgtg 21351858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 7677714 - 7677770
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  7677714 aataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcgg 7677770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 5894889 - 5894823
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| |||||||||||||||||| |||||| | | ||| |||||||||||||||||||||||||||    
T  5894889 acaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacac 5894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 10298572 - 10298638
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| |||||||||||||| ||| ||||| || |||||||||||||||||||||||| ||||||||    
T  10298572 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacac 10298638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 21542033 - 21542095
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||| |||| || | ||||||||||||||||||||||||||||||||||||||    
T  21542033 acaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 21542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 21576795 - 21576745
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  21576795 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 21576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 42893369 - 42893418
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  42893369 aataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 17177073 - 17177025
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  17177073 aataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 21522759 - 21522815
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||    
T  21522759 aataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21522815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 21533325 - 21533381
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||    
T  21533325 aataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 33178028 - 33178084
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  33178028 acaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 37328894 - 37328838
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||    
T  37328894 aataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcgg 37328838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 43001809 - 43001869
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||  |||||||||||    
T  43001809 aataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacac 43001869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 8420036 - 8420086
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  8420036 aataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 15382497 - 15382590
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtc-gtgtcggacac------tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||| ||||||      ||||||||| || |||||| |||||||||||||||    
T  15382497 aaaaaatcatataattcagtataattacaagtgtcggtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtg 15382590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 19579710 - 19579764
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||    
T  19579710 aataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 24906351 - 24906305
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggt 307  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||    
T  24906351 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 14674278 - 14674323
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcgg 306  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  14674278 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 15405111 - 15405062
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  15405111 acaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 15884006 - 15884047
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 15884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 40131620 - 40131681
Alignment:
Q  251 tgatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||| || | ||||||||||    
T  40131620 tgatacaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgt 40131681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 41633744 - 41633800
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||| | | |||||||||||||||||||| |||||||||||| ||||    
T  41633744 aataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcgg 41633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 6471939 - 6471880
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggaca 320  Q
    |||||||||| ||||||| ||||||||||||||||| | |||| |||||||||| |||||    
T  6471939 aataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggaca 6471880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 30183552 - 30183611
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| ||||||||||||| |||| || |||| || ||||||||||||||||||||||||    
T  30183552 acaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgt 30183611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 3966512 - 3966566
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| | ||||||||||||||| | ||||||||||||||||    
T  3966512 aataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 7218317 - 7218271
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggt 307  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||    
T  7218317 aataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 17088293 - 17088406
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtc------gtgtcggacac-tgtccgacaacgagacacgtctaatccgagg 352  Q
    ||||||||||||||| ||| |||||| ||||| ||||||||||||  ||||      ||||||| ||| ||||||||| || |||||| |||||||||||    
T  17088293 aataatttgaaaaaaatcacataatttagtgtgattacaagtgtcactgtcgtgtcggtgtcggtcacgtgtccgacaccgggacacgcctaatccgagg 17088392  T
Q  353 agtggccgtgtttt 366  Q
    |||| |||||||||    
T  17088393 agtgtccgtgtttt 17088406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 28588724 - 28588674
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  28588724 aataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 30135316 - 30135377
Alignment:
Q  255 acaaccaataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    ||||| ||||||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||    
T  30135316 acaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtcatgtc 30135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 43564891 - 43564940
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcg 43564940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 12199948 - 12199992
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcgtgt 12199992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 14873527 - 14873642
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggagt 355  Q
    ||||||||| |||| || |||||| |||||||||| | ||||||||||| |||||||| |      ||||| ||| || |||||| ||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagt 14873626  T
Q  356 ggccgtgttttatagg 371  Q
    | ||||| || |||||    
T  14873627 gtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 38749613 - 38749553
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||||||||| | |||||||| |||||||| | |||| ||||| |||||||||||    
T  38749613 aataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggacac 38749553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 25888334 - 25888287
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||||||||||||| |||| || ||||||||||||    
T  25888334 aaaaaatcatataattcagtgtaattataagtctccgtgtcgtgtcgg 25888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 16374392 - 16374338
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||  ||||||| | |||| |||||||||||||| ||||||||||||||||    
T  16374392 aataattgaaaaaaataacataaatcagtgtaattacatgtgtcggtgtcgtgtc 16374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 356
Target Start/End: Complemental strand, 23016035 - 23015938
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggagtg 356  Q
    |||||| ||||||| ||||||||||||||||| | |||||| ||| || ||||||||      |||||||||  | |||||| |||||||||||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtg 23015938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 26312778 - 26312828
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| |||||||| |||||||||||||||| | || |||||||||    
T  26312778 aataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcg 26312828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 30502438 - 30502388
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| |||||||  |||||||||||||||| | ||||||||||||    
T  30502438 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 30542781 - 30542731
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| |||||||  |||||||||||||||| | ||||||||||||    
T  30542781 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 41091303 - 41091253
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||| ||||||| ||||||||||||||||| | |||||| |||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 41091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 4105266 - 4105310
Alignment:
Q  261 aataatttgaaaaaa--tcaaataattcagtgtaattacaagtgt 303  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||    
T  4105266 aataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 6326345 - 6326304
Alignment:
Q  263 taatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||| ||||| | |||||||||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 19552593 - 19552539
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||| ||||||  || |||||||| |||||||||||    
T  19552593 aataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcgtgtcgg 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 36838552 - 36838605
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||| | |||||| |||||||||| | |||||||||||||||    
T  36838552 aataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 504
Target Start/End: Complemental strand, 40578133 - 40578096
Alignment:
Q  467 atgaataatagtaaagaaactcaatggaaattgtatga 504  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40578133 atgaataatagtaaagagactcaatggaaattggatga 40578096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 41558701 - 41558644
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||| ||||| | |||||||| |||||||| | ||||| ||||||||||||||||    
T  41558701 aatttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcgtgtcggacac 41558644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 2436931 - 2436991
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||| |||||||| |||||||  ||| |||| | |||||||||||||||| |||||    
T  2436931 aataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtccgacac 2436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 5468028 - 5467984
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||    
T  5468028 aataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 22423862 - 22423806
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| ||||||| |||||||| | |||||| |  |||||||||||||||||    
T  22423862 aataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcgg 22423806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 25863213 - 25863257
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    |||||||||| ||||| | ||||||||||||||||| ||||||||    
T  25863213 aataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 39205889 - 39205949
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||| ||||||| ||||||  ||||||||| | |||| ||||||||||| |||||    
T  39205889 aataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacac 39205949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 6e-23; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 379 - 477
Target Start/End: Original strand, 19804798 - 19804897
Alignment:
Q  379 taaaggcaatgaattgacacggcaacgaaaactaaatcataaagccaaggatt-aaaagcaatatgtcttacggcaccagcaacaactcatgaataatag 477  Q
    ||||||||||||||| ||||||||| ||| ||||||||| ||||| ||||| | ||||||||||||||||||||||||||||| | | ||||||||||||    
T  19804798 taaaggcaatgaatttacacggcaatgaacactaaatcaaaaagctaaggaatcaaaagcaatatgtcttacggcaccagcaatagcacatgaataatag 19804897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 2438769 - 2438667
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||     ||||| ||||||||| || |||||| ||||||||||||||| ||    
T  2438769 aataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtcc 2438670  T
Q  360 gtg 362  Q
    |||    
T  2438669 gtg 2438667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 30717580 - 30717525
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  30717580 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 30717525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 974750 - 974816
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||    
T  974750 acaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttggacac 974816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 23058493 - 23058392
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacactgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    ||||||||| || |||||| |||||||||| |||| ||    
T  23058493 aataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcgg-tgttgtccgacaccgggacacgcctaatccgagaagtgtcc 23058395  T
Q  360 gtg 362  Q
    |||    
T  23058394 gtg 23058392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 12668473 - 12668417
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  12668473 aataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 20539724 - 20539672
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtg 313  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  20539724 aataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 37419752 - 37419808
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcgg 37419808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 15657868 - 15657926
Alignment:
Q  256 caaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  15657868 caactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 15657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 30404900 - 30404850
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  30404900 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcg 30404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 14996274 - 14996213
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||    
T  14996274 aataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 19536454 - 19536397
Alignment:
Q  255 acaaccaataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  19536454 acaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 4882742 - 4882690
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||    
T  4882742 atttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcgg 4882690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 18841069 - 18840961
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgagga 353  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||||||||||||      ||||| ||||||||| || |||||  ||||||||||||    
T  18841069 acaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgagga 18840970  T
Q  354 gtggccgtg 362  Q
    ||| |||||    
T  18840969 gtgtccgtg 18840961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 33153437 - 33153488
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  33153437 atttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgtcg 33153488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 36756400 - 36756341
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| ||||||||||| |||| | ||||||||||||||||| |||||||||||||||||    
T  36756400 acaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 12940991 - 12940941
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  12940991 acaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 15972882 - 15972932
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||||||    
T  15972882 aataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcg 15972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 18421972 - 18422022
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  18421972 aataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 37558986 - 37559036
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  37558986 aataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 362
Target Start/End: Original strand, 44635527 - 44635604
Alignment:
Q  281 taattcagtgtaattacaagtgtcggtgtc-gtgtcggacactgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    |||||||||||||||||||||||||||||| ||||||||||     ||||| ||||||||| |||||| |||||||| |||||    
T  44635527 taattcagtgtaattacaagtgtcggtgtcggtgtcggaca-----cgacaccgagacacgcctaatctgaggagtgtccgtg 44635604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 11223913 - 11223864
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  11223913 aatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 20473325 - 20473381
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||||||||| |||||    
T  20473325 acaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcg 20473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 24894398 - 24894458
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||| ||||||||| ||||||||||| ||||| |||||| ||| |||||||||||||    
T  24894398 aataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcggacac 24894458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 30335420 - 30335476
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||| |||||||||||    
T  30335420 acaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 21374749 - 21374706
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  21374749 aataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 5040732 - 5040793
Alignment:
Q  252 gatacaaccaataatttgaaaaaa--tcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||| | |||||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  5040732 gatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 5040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 353
Target Start/End: Complemental strand, 29367382 - 29367300
Alignment:
Q  273 aaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg-aca-ctgtccgacaacgagacacgtctaatccgagga 353  Q
    |||||| |||||| ||||||||||||| ||||||| ||||||||| |||  ||||||||| ||||||| | ||||||||||||    
T  29367382 aaatcacataatttagtgtaattacaaatgtcggtatcgtgtcggtacatgtgtccgacaccgagacatgcctaatccgagga 29367300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 34691855 - 34691805
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  34691855 aataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 34714267 - 34714217
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  34714267 aataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 38117209 - 38117159
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||| ||| |||||||||||||||| |||||||    
T  38117209 aataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcg 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 44860329 - 44860382
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||||  ||||||||||||||||| | |||||||||||||||    
T  44860329 aataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 39279684 - 39279732
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||| ||| ||||||||||||||||||||||||| | ||||||||||    
T  39279684 aataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 311
Target Start/End: Original strand, 21624295 - 21624326
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||||||||||||||||||    
T  21624295 ataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 28677918 - 28677953
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaatta 296  Q
    |||||||||||||||||| |||||||||||||||||    
T  28677918 aataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 39323273 - 39323316
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||||| ||||| | |||||||||||||||||||||||||    
T  39323273 aataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 5367201 - 5367251
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||  |||||| ||||||||||||||||| | ||||||||||||    
T  5367201 aataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 18256030 - 18255980
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| ||||||||| |||||| | |||||||| ||||||||||||||    
T  18256030 aataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcg 18255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 18420484 - 18420430
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||| ||||||| |||||||| || ||||| |||||||||||| |||||    
T  18420484 aataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtc 18420430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 18622615 - 18622669
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||| | ||||||| ||||||||||||||||| | |||| |||||||||||    
T  18622615 aataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 26769514 - 26769576
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| || ||   ||||||||||||||||||||||| ||||||    
T  26769514 acaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcgg 26769576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 35056883 - 35056933
Alignment:
Q  267 ttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||| |||| || ||||||||||||||||| | ||||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcgg 35056933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 32749869 - 32749820
Alignment:
Q  267 ttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    |||| ||||||| ||||||||||||||| | ||||||| |||||||||||    
T  32749869 ttgagaaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcg 32749820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 34785021 - 34784976
Alignment:
Q  272 aaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||| |||||| |||||||||| | ||||||||||||||||||    
T  34785021 aaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcgg 34784976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 42832326 - 42832277
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||| | ||| ||||||||||||| |||||||||||||    
T  42832326 aataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 29176543 - 29176495
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||||||||  ||| ||||||||||||||||| |||||| |||||    
T  29176543 aataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 311
Target Start/End: Original strand, 33884082 - 33884110
Alignment:
Q  283 attcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||||||||||||||    
T  33884082 attcagtgtaattacaagtgtcggtgtcg 33884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 38442310 - 38442366
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| ||| |||| ||||||||| |||||||| | |||||| ||||||||||||||    
T  38442310 acaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 17507331 - 17507396
Alignment:
Q  188 aaaaataaaagtataaatcaatttcatgttttggttatcgaaatataggttagcaattagaaatga 253  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  17507331 aaaaaaaaaagtataaatcaatttcaagttttggttatcaaaatataggttagcaattggaaatga 17507396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 25566850 - 25566903
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25566850 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 2572106 - 2572052
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2572106 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2572052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 4948661 - 4948711
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4948661 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 10643824 - 10643759
Alignment:
Q  188 aaaaataaaagtataaatcaatttcatgttttggttatcgaaatataggttagcaattagaaatga 253  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  10643824 aaaaaaaaaaatataaatcaatttcaagttttggttatcaaaatataggttagcaattggaaatga 10643759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 22651985 - 22652041
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  22651985 aataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcgg 22652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 8342981 - 8343032
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8342981 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 15816185 - 15816126
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  15816185 acaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 20873078 - 20873128
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20873078 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 40332200 - 40332305
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagtggcc 359  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||| |     ||||| ||||| ||| || ||| || ||||||||||||||| ||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtcc 40332299  T
Q  360 gtgttt 365  Q
    ||||||    
T  40332300 gtgttt 40332305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 13437014 - 13436958
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  13437014 aataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcgg 13436958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 29510354 - 29510298
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||    
T  29510354 aataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 36450810 - 36450754
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  36450810 acaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcg 36450754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 8343325 - 8343376
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  8343325 aataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgt 8343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 21465421 - 21465475
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||||||||    
T  21465421 aataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtc 21465475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 29447166 - 29447104
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||||| ||||||    
T  29447166 acaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcgg 29447104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 30077437 - 30077387
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  30077437 aataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 32712012 - 32712062
Alignment:
Q  203 aatcaatttcatgttttggttatcgaaatataggttagcaattagaaatga 253  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  32712012 aatcaatttcaagttttggttatctaaatataggttagcaattggaaatga 32712062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 41831990 - 41831889
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac------tgtccgacaacgagacacgtctaatccgaggag 354  Q
    |||||||||||||||||| |||||||||||||| |||||||||||   | |||||||||||      | |||||||||  |||||||||||| |||||||    
T  41831990 aataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattcgaggag 41831891  T
Q  355 tg 356  Q
    ||    
T  41831890 tg 41831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 4298936 - 4298887
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  4298936 aataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 11927136 - 11927083
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  11927136 aataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 17468564 - 17468503
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||| ||||||||| |||||||| ||||| | |||||||||||||||| ||||||||||||    
T  17468564 acaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtcg 17468503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 24858030 - 24858080
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  24858030 aaaaaatcacataattcagtgtaat-acaagtgtcgttgtcgtgtcggacac 24858080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 22596003 - 22596053
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| ||||||| | |||||||||||||||||||||||| |||||||    
T  22596003 aataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 24613530 - 24613579
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  24613530 aataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 24669442 - 24669492
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  24669442 aataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 30271337 - 30271287
Alignment:
Q  265 atttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtc 315  Q
    |||||||||||||| ||||| ||||||||||||||||| | ||||||||||    
T  30271337 atttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgtc 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 4673475 - 4673426
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||||||| | |||||||||||||||||||| || |||||    
T  4673475 aataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtc 4673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 11944674 - 11944727
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| ||||||| |||| |||||||||||| | |||||||||||||||    
T  11944674 aataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 20679445 - 20679396
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||||||||    
T  20679445 aataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 22197792 - 22197743
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||| ||| |||||| |||||||||||||||||| |||||    
T  22197792 aataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 31557006 - 31557054
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  31557006 aataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 18407728 - 18407772
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcg 305  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||    
T  18407728 aataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 28745507 - 28745563
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||| ||| |||||||| ||||| ||||| ||||| |||||||||||    
T  28745507 aataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcgg 28745563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 18170529 - 18170482
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||| | |||||||| ||||||||||| |||||||||||    
T  18170529 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 18634097 - 18634050
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||| | |||||||| ||||||||||| |||||||||||    
T  18634097 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 3025560 - 3025610
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||| ||||||    
T  3025560 aataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 4786388 - 4786338
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||| | ||||||| ||||||||||||||||| | ||||||||||||    
T  4786388 aataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 5813601 - 5813651
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||| ||| ||| || ||||||| |||||||||||||||||    
T  5813601 aataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 5813651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 13844646 - 13844596
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| |||||| |||||||||| | ||||||||||||    
T  13844646 aataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 34897094 - 34897144
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||| ||||||| ||||||||||||||||| | |||||| |||||    
T  34897094 aataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 34897144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 12606879 - 12606830
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||||| |||||||| |||||||| | |||||||||||    
T  12606879 aataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 12882369 - 12882332
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggt 307  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  12882369 aaaaaattaaataattcagtgtaattataagtgtcggt 12882332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 14134708 - 14134757
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||||| ||||||||||||||||| |  ||||||||||    
T  14134708 aataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 7442854 - 7442902
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgt 309  Q
    |||||||| | ||||| | |||||||||||||||||||||||| |||||    
T  7442854 aataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 22652058 - 22652098
Alignment:
Q  322 tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||||| || |||||||||||||||||||||| |||||    
T  22652058 tgtccgacaccgggacacgtctaatccgaggagtgtccgtg 22652098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 24362252 - 24362196
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| | ||||| ||||||||||||||||| | |||||  |||||||||||    
T  24362252 aataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcgg 24362196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 26902214 - 26902174
Alignment:
Q  272 aaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||||| ||||||||||||||||| | |||||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgt 26902174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 34222956 - 34223016
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||| | ||||||| |||||| |||||||||| | |||||||| | |||||||||||    
T  34222956 aataatttaataaaatcacataattaagtgtaattatatgtgtcggtatggtgtcggacac 34223016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 20181 - 20237
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  20181 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 20237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 23438 - 23489
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacac 23489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 23529 - 23576
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||| ||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcgg 23576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 8807 - 8902
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac-tgtccgacaacgagacacgtctaatccgaggagt 355  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||||     ||||| ||||||||| ||||||||| |||||| |||||||    
T  8807 aataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagt 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 17805 - 17750
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17805 acaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 512 - 462
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  512 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 53187 - 53245
Alignment:
Q  259 ccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  53187 ccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcgg 53245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 46691 - 46741
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  46691 aataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 23778 - 23832
Alignment:
Q  261 aataatttgaaaaaa-tcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  23778 aataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 3899 - 3846
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  3899 aataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 3846  T

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Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 14533 - 14580
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtg 302  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  14533 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 13403 - 13470
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc-gtgtcggacac 321  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||||| ||||||||| |||||||||||    
T  13403 acaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacac 13470  T

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Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 21924 - 21857
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc-gtgtcggacac 321  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||||| ||||||||| |||||||||||    
T  21924 acaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacac 21857  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 130491 - 130538
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtg 308  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  130491 aatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 8691 - 8629
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||| ||||||||||||| |||| ||||||| || ||||||||| |||||||||||||||||    
T  8691 acaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcgg 8629  T

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Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 51820 - 51862
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  51820 aataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 70287 - 70337
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  70287 aataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcg 70337  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 178875 - 178813
Alignment:
Q  255 acaaccaataatttgaaaaaatcaa-ataattcagtgtaattacaagtgtcggtgtcgtgtcg 316  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||    
T  178875 acaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtcatgtcg 178813  T

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Target: scaffold0793 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 4924 - 4829
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt--cggacac-tgtccgacaacgagacacgtctaatccgaggagtggccgtg 362  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||    ||||| |||||||||  | |||||| ||||||||||||||| |||||    
T  4924 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtg 4829  T

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Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 8013 - 8068
Alignment:
Q  255 acaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  8013 acaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcg 8068  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 135362 - 135302
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcggacac 321  Q
    |||||||||| ||||||| ||||||| ||||||||| | |||||||||||||||| |||||    
T  135362 aataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacac 135302  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 263422 - 263366
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||| |||| || ||||||||||||||||| ||||||| ||||||||||||    
T  263422 aataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcgg 263366  T

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Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 19576 - 19626
Alignment:
Q  252 gatacaaccaataatttgaaaaaatcaaataattcagtgtaattacaagtgt 303  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  19576 gatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 25818 - 25765
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||| || ||||||| |||||| |||||||||| |||||||||||||||||    
T  25818 aataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 44572 - 44519
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||| ||||||| ||||||||||||||||| | |||||||| |||||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcgg 44519  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 63782 - 63831
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    |||||||||| ||||| | ||||||||||| |||||||||||||||||||    
T  63782 aataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 56932 - 56987
Alignment:
Q  262 ataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| ||||| | ||||||||||||||| | ||||||| ||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgtcgg 56987  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 9797 - 9744
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    |||||||||| |||||||  |||||||||||||||| | |||||||||||||||    
T  9797 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 241603 - 241656
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgt 314  Q
    ||||||||| |||||||| |||||| ||||||||||  ||||||||||||||||    
T  241603 aataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgt 241656  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 83172 - 83220
Alignment:
Q  264 aatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgt 312  Q
    ||||| ||||||| | |||||||||||||||||||| ||||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcgt 83220  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 123650 - 123686
Alignment:
Q  274 aatcaaataattcagtgtaattacaagtgtcggtgtc 310  Q
    ||||| |||||||||||||||||||||||||||||||    
T  123650 aatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 92816 - 92859
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtc 304  Q
    |||||||||| ||||| | |||||||||||||||||||||||||    
T  92816 aataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 2946 - 2993
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| |||||| ||||||||||||||| || ||||||||||||    
T  2946 aaaaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcgg 2993  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 311
Target Start/End: Complemental strand, 45561 - 45530
Alignment:
Q  280 ataattcagtgtaattacaagtgtcggtgtcg 311  Q
    ||||||||||||||||||||||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcg 45530  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 71743 - 71790
Alignment:
Q  270 aaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    ||||||||| | |||||||||||||||| |||||| ||||||||||||    
T  71743 aaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcgg 71790  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 7082 - 7032
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcg 311  Q
    |||||||||||||||| | |||||| ||| ||||||||||||| |||||||    
T  7082 aataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcg 7032  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 33413 - 33375
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaa 299  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  33413 aataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 1044 - 1100
Alignment:
Q  261 aataatttgaaaaaatcaaataattcagtgtaattacaagtgtcggtgtcgtgtcgg 317  Q
    |||||||||||||||| | |||||||||||||| || | ||||| |||| |||||||    
T  1044 aataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 1100  T

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