View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11658_low_30 (Length: 256)
Name: NF11658_low_30
Description: NF11658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11658_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 14511827 - 14512046
Alignment:
| Q |
19 |
ataagtccttttgtgctattcaatgatgacttcttcactccagaagacctatatttctaaaatcaccaatccatttcatcaagaatattatgtggactca |
118 |
Q |
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| T |
14511827 |
ataagtccttttgtgctattcaatgatgacttcttcaccccagaagacctatatttctaaaatcaccaatccatttcatcaagaatattatgtggactca |
14511926 |
T |
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| Q |
119 |
attgaaatataacatatattatagnnnnnnntcaatatataataagtggtgtcatcattttgcaaaataaagtggaaagttaatgtatttaaaccaatta |
218 |
Q |
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| T |
14511927 |
attgaaatataacatatattatagaaaaaaatcaatatataataagtggtgtcatcattctgcaaaataaagtggaaagttaatgtatttaaaccaatta |
14512026 |
T |
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| Q |
219 |
ttagaccaaacacgttaact |
238 |
Q |
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|||||||||||| ||||||| |
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| T |
14512027 |
ttagaccaaacatgttaact |
14512046 |
T |
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