View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11658_low_4 (Length: 576)

Name: NF11658_low_4
Description: NF11658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11658_low_4
NF11658_low_4
[»] chr2 (62 HSPs)
chr2 (19-343)||(649154-649478)
chr2 (381-568)||(649516-649702)
chr2 (391-568)||(38007949-38008127)
chr2 (390-568)||(42192612-42192791)
chr2 (392-566)||(4355755-4355929)
chr2 (391-568)||(16175719-16175897)
chr2 (391-568)||(20128107-20128284)
chr2 (392-568)||(42192240-42192416)
chr2 (390-568)||(11539635-11539814)
chr2 (391-568)||(11540008-11540185)
chr2 (395-568)||(33920615-33920788)
chr2 (390-568)||(32418157-32418333)
chr2 (391-568)||(43216079-43216256)
chr2 (391-568)||(62956-63133)
chr2 (395-568)||(4808882-4809055)
chr2 (384-568)||(38008321-38008505)
chr2 (395-566)||(43160012-43160184)
chr2 (395-553)||(15550676-15550835)
chr2 (393-568)||(16953304-16953479)
chr2 (383-565)||(20127727-20127910)
chr2 (395-568)||(9330164-9330338)
chr2 (391-568)||(33920981-33921159)
chr2 (382-568)||(63328-63520)
chr2 (390-565)||(6949449-6949625)
chr2 (390-566)||(43160382-43160559)
chr2 (391-550)||(24140068-24140221)
chr2 (391-484)||(25336054-25336147)
chr2 (391-568)||(4356126-4356303)
chr2 (392-484)||(6949898-6949990)
chr2 (391-568)||(44219643-44219820)
chr2 (390-568)||(44220013-44220193)
chr2 (390-568)||(16952933-16953113)
chr2 (390-568)||(17060904-17061084)
chr2 (384-568)||(4809249-4809433)
chr2 (424-554)||(13399454-13399584)
chr2 (395-568)||(5560920-5561083)
chr2 (395-568)||(13315496-13315673)
chr2 (395-568)||(15551044-15551218)
chr2 (391-535)||(32418550-32418693)
chr2 (391-568)||(13399790-13399966)
chr2 (391-545)||(28143424-28143576)
chr2 (384-545)||(31797172-31797331)
chr2 (390-484)||(5560049-5560143)
chr2 (394-473)||(649802-649881)
chr2 (395-482)||(20495196-20495283)
chr2 (402-478)||(2190536-2190612)
chr2 (391-478)||(14942306-14942393)
chr2 (387-467)||(3824179-3824259)
chr2 (395-568)||(22445642-22445816)
chr2 (493-566)||(43215809-43215883)
chr2 (395-466)||(3822924-3822995)
chr2 (391-445)||(1978601-1978655)
chr2 (390-467)||(9747519-9747596)
chr2 (395-467)||(8425358-8425430)
chr2 (381-445)||(20444738-20444802)
chr2 (434-481)||(5037155-5037202)
chr2 (432-482)||(5035903-5035953)
chr2 (391-445)||(20440523-20440577)
chr2 (383-444)||(18450821-18450882)
chr2 (382-414)||(7446332-7446364)
chr2 (497-545)||(9329985-9330033)
chr2 (391-443)||(22374819-22374871)
[»] chr4 (72 HSPs)
chr4 (391-569)||(46737024-46737202)
chr4 (394-568)||(34789752-34789927)
chr4 (391-568)||(34807115-34807293)
chr4 (391-565)||(33689828-33690001)
chr4 (394-568)||(24851835-24852010)
chr4 (390-568)||(55677327-55677506)
chr4 (382-555)||(19528859-19529033)
chr4 (390-568)||(21034606-21034785)
chr4 (394-568)||(28465083-28465257)
chr4 (394-568)||(54440573-54440745)
chr4 (395-568)||(14439831-14440004)
chr4 (392-564)||(21034235-21034408)
chr4 (391-568)||(12593393-12593570)
chr4 (392-568)||(34789382-34789558)
chr4 (391-568)||(45838546-45838723)
chr4 (382-568)||(45838917-45839105)
chr4 (382-566)||(12593014-12593198)
chr4 (392-568)||(14440198-14440374)
chr4 (392-568)||(28465451-28465627)
chr4 (390-566)||(36168327-36168506)
chr4 (392-567)||(56077695-56077870)
chr4 (384-568)||(41114149-41114335)
chr4 (394-568)||(54440939-54441113)
chr4 (390-568)||(26974281-26974460)
chr4 (395-521)||(26974662-26974788)
chr4 (395-568)||(41608377-41608551)
chr4 (390-568)||(6616670-6616849)
chr4 (395-531)||(6617070-6617205)
chr4 (391-483)||(41608870-41608962)
chr4 (406-545)||(35193322-35193459)
chr4 (390-566)||(46736653-46736829)
chr4 (395-568)||(16214865-16215038)
chr4 (391-568)||(19529063-19529241)
chr4 (395-568)||(28166007-28166180)
chr4 (391-483)||(24851315-24851407)
chr4 (392-484)||(30597973-30598065)
chr4 (394-458)||(35644042-35644106)
chr4 (391-568)||(36168701-36168878)
chr4 (390-568)||(229529-229707)
chr4 (493-566)||(24851565-24851639)
chr4 (421-568)||(34807509-34807656)
chr4 (390-482)||(51309961-51310053)
chr4 (394-527)||(33778024-33778156)
chr4 (391-482)||(35193759-35193849)
chr4 (390-485)||(40160092-40160187)
chr4 (395-480)||(10795769-10795854)
chr4 (391-467)||(24335760-24335836)
chr4 (394-478)||(24336223-24336307)
chr4 (493-568)||(35643667-35643743)
chr4 (395-482)||(229164-229251)
chr4 (395-482)||(40160547-40160633)
chr4 (394-480)||(1397597-1397683)
chr4 (395-485)||(33777635-33777725)
chr4 (393-482)||(23986521-23986610)
chr4 (390-482)||(17503972-17504063)
chr4 (429-485)||(17504412-17504468)
chr4 (394-466)||(51641302-51641374)
chr4 (394-465)||(44219377-44219448)
chr4 (395-485)||(35643558-35643648)
chr4 (393-556)||(18965141-18965304)
chr4 (390-445)||(25938163-25938218)
chr4 (390-466)||(51640958-51641034)
chr4 (394-445)||(2118295-2118346)
chr4 (495-561)||(18965513-18965580)
chr4 (384-414)||(16318299-16318329)
chr4 (424-466)||(31297161-31297203)
chr4 (392-453)||(16691555-16691616)
chr4 (435-484)||(30596294-30596343)
chr4 (392-445)||(46193405-46193458)
chr4 (378-414)||(10258410-10258446)
chr4 (493-529)||(35643968-35644004)
chr4 (381-445)||(51021287-51021351)
[»] chr6 (30 HSPs)
chr6 (383-568)||(31574095-31574280)
chr6 (392-568)||(31073512-31073688)
chr6 (391-545)||(5120863-5121016)
chr6 (392-568)||(25472382-25472559)
chr6 (395-568)||(25468852-25469027)
chr6 (390-568)||(5114466-5114644)
chr6 (391-568)||(29891079-29891256)
chr6 (392-537)||(28636292-28636435)
chr6 (395-568)||(24640555-24640728)
chr6 (391-565)||(30251064-30251239)
chr6 (391-568)||(31573719-31573901)
chr6 (392-533)||(31073143-31073290)
chr6 (384-485)||(35163640-35163741)
chr6 (391-565)||(29891453-29891631)
chr6 (493-568)||(28636566-28636642)
chr6 (392-485)||(32836449-32836542)
chr6 (393-446)||(30250722-30250775)
chr6 (395-482)||(32836010-32836096)
chr6 (382-482)||(835384-835484)
chr6 (394-482)||(33095716-33095804)
chr6 (395-482)||(31242809-31242896)
chr6 (391-468)||(835695-835772)
chr6 (392-445)||(22534217-22534270)
chr6 (390-473)||(3835190-3835273)
chr6 (395-482)||(35163187-35163273)
chr6 (389-467)||(23073996-23074074)
chr6 (391-445)||(28472636-28472690)
chr6 (391-445)||(29859825-29859879)
chr6 (512-556)||(30250810-30250855)
chr6 (391-467)||(11445457-11445533)
[»] chr8 (38 HSPs)
chr8 (393-568)||(28254796-28254971)
chr8 (390-564)||(599530-599704)
chr8 (392-568)||(9796726-9796902)
chr8 (391-568)||(34799453-34799630)
chr8 (391-568)||(41260631-41260808)
chr8 (391-527)||(15255852-15255987)
chr8 (385-568)||(18428131-18428315)
chr8 (391-568)||(35427182-35427359)
chr8 (391-567)||(6115481-6115658)
chr8 (392-568)||(18049590-18049767)
chr8 (395-568)||(18049961-18050134)
chr8 (391-535)||(16578107-16578250)
chr8 (392-568)||(7910986-7911162)
chr8 (394-568)||(28254427-28254602)
chr8 (394-568)||(5731182-5731356)
chr8 (391-568)||(34799078-34799256)
chr8 (391-563)||(15256203-15256378)
chr8 (393-568)||(42035773-42035948)
chr8 (393-568)||(35693869-35694046)
chr8 (391-565)||(42036144-42036319)
chr8 (395-568)||(9797096-9797270)
chr8 (391-565)||(26252810-26252982)
chr8 (391-569)||(599867-600045)
chr8 (395-566)||(35694242-35694421)
chr8 (390-531)||(41260269-41260409)
chr8 (391-568)||(16578466-16578643)
chr8 (390-485)||(18674146-18674241)
chr8 (394-568)||(2208716-2208891)
chr8 (391-554)||(5730816-5730979)
chr8 (390-485)||(7910614-7910709)
chr8 (390-477)||(28877350-28877437)
chr8 (390-482)||(28876901-28876993)
chr8 (395-485)||(18805167-18805256)
chr8 (381-482)||(9930112-9930213)
chr8 (512-568)||(35163817-35163874)
chr8 (497-568)||(35426917-35426989)
chr8 (395-445)||(35426845-35426895)
chr8 (391-443)||(33742921-33742973)
[»] chr7 (55 HSPs)
chr7 (391-568)||(25637196-25637374)
chr7 (392-568)||(27245203-27245380)
chr7 (398-544)||(35161196-35161342)
chr7 (391-568)||(7732487-7732664)
chr7 (389-566)||(16081671-16081848)
chr7 (395-568)||(28687869-28688041)
chr7 (391-568)||(48247586-48247767)
chr7 (390-568)||(9181779-9181960)
chr7 (392-566)||(26048319-26048492)
chr7 (393-568)||(39388636-39388813)
chr7 (395-568)||(26026320-26026494)
chr7 (391-568)||(48247961-48248139)
chr7 (394-568)||(9181534-9181708)
chr7 (395-568)||(25637568-25637741)
chr7 (392-568)||(24929673-24929854)
chr7 (390-569)||(2758067-2758246)
chr7 (395-568)||(11973772-11973945)
chr7 (390-568)||(5746009-5746188)
chr7 (393-568)||(15712366-15712541)
chr7 (391-531)||(5333879-5334018)
chr7 (390-566)||(786780-786957)
chr7 (395-568)||(5745642-5745815)
chr7 (395-568)||(787152-787329)
chr7 (390-568)||(16081297-16081475)
chr7 (392-545)||(28687593-28687745)
chr7 (390-568)||(11971332-11971514)
chr7 (394-568)||(14311317-14311492)
chr7 (390-568)||(34595142-34595320)
chr7 (382-568)||(7732857-7733043)
chr7 (394-568)||(27245574-27245748)
chr7 (394-484)||(5334273-5334363)
chr7 (395-566)||(14311659-14311830)
chr7 (395-568)||(26026688-26026861)
chr7 (391-482)||(39136685-39136776)
chr7 (391-485)||(16917712-16917806)
chr7 (383-480)||(39136991-39137088)
chr7 (393-484)||(9394184-9394274)
chr7 (392-482)||(4477702-4477792)
chr7 (390-482)||(45815342-45815431)
chr7 (390-482)||(49064032-49064124)
chr7 (395-448)||(5184431-5184484)
chr7 (512-568)||(26048067-26048124)
chr7 (395-472)||(35578902-35578979)
chr7 (395-485)||(26047960-26048050)
chr7 (394-568)||(34594585-34594758)
chr7 (394-482)||(9393738-9393825)
chr7 (401-483)||(18535338-18535419)
chr7 (493-554)||(33880969-33881030)
chr7 (394-478)||(33880622-33880706)
chr7 (391-482)||(49064176-49064267)
chr7 (391-445)||(38859133-38859187)
chr7 (395-437)||(40669709-40669751)
chr7 (393-482)||(35579342-35579430)
chr7 (497-545)||(5184498-5184546)
chr7 (399-443)||(35160660-35160704)
[»] chr3 (77 HSPs)
chr3 (390-568)||(46013420-46013598)
chr3 (390-568)||(51827955-51828133)
chr3 (390-568)||(51828537-51828716)
chr3 (391-568)||(49720370-49720547)
chr3 (392-568)||(49951916-49952092)
chr3 (392-565)||(43678657-43678830)
chr3 (384-568)||(330206-330390)
chr3 (392-568)||(40275464-40275639)
chr3 (391-568)||(47431695-47431873)
chr3 (384-568)||(25534882-25535067)
chr3 (380-568)||(51473225-51473414)
chr3 (391-568)||(52375701-52375878)
chr3 (390-568)||(14654561-14654737)
chr3 (391-568)||(41998228-41998406)
chr3 (395-568)||(32730392-32730565)
chr3 (391-570)||(55389604-55389783)
chr3 (395-565)||(40838655-40838825)
chr3 (398-568)||(34105018-34105190)
chr3 (392-568)||(43678295-43678471)
chr3 (392-568)||(44676472-44676648)
chr3 (393-568)||(46013792-46013968)
chr3 (390-566)||(51472853-51473029)
chr3 (391-566)||(38535667-38535842)
chr3 (392-568)||(40275093-40275271)
chr3 (394-568)||(52236818-52236992)
chr3 (390-566)||(2044269-2044445)
chr3 (395-556)||(40839034-40839195)
chr3 (394-554)||(52237201-52237361)
chr3 (394-568)||(30513724-30513898)
chr3 (390-540)||(41998628-41998776)
chr3 (390-568)||(49951544-49951722)
chr3 (391-568)||(55389967-55390144)
chr3 (395-542)||(22370599-22370746)
chr3 (391-553)||(38535308-38535470)
chr3 (390-568)||(44676842-44677020)
chr3 (392-568)||(51828327-51828504)
chr3 (391-568)||(2051294-2051475)
chr3 (392-568)||(50662782-50662958)
chr3 (392-568)||(52375327-52375503)
chr3 (395-531)||(16689361-16689496)
chr3 (394-568)||(32730759-32730933)
chr3 (390-568)||(39010073-39010250)
chr3 (390-531)||(49720769-49720909)
chr3 (392-568)||(51828910-51829086)
chr3 (390-568)||(34104636-34104813)
chr3 (390-535)||(16701193-16701340)
chr3 (396-527)||(329850-329980)
chr3 (382-482)||(36701096-36701196)
chr3 (384-562)||(43222765-43222944)
chr3 (391-545)||(27200086-27200238)
chr3 (391-545)||(49407795-49407947)
chr3 (391-485)||(14654198-14654292)
chr3 (395-542)||(27199705-27199851)
chr3 (391-485)||(50900980-50901074)
chr3 (394-532)||(36701503-36701640)
chr3 (391-483)||(33412609-33412701)
chr3 (393-485)||(37075687-37075779)
chr3 (393-482)||(37076131-37076219)
chr3 (392-485)||(43222390-43222483)
chr3 (392-545)||(55192118-55192269)
chr3 (395-485)||(8874139-8874229)
chr3 (392-482)||(12141147-12141237)
chr3 (385-445)||(23644455-23644515)
chr3 (391-445)||(30104481-30104535)
chr3 (393-467)||(49408252-49408326)
chr3 (391-467)||(20840559-20840635)
chr3 (395-467)||(25612447-25612519)
chr3 (421-473)||(39010486-39010538)
chr3 (394-482)||(50900534-50900621)
chr3 (391-445)||(24301048-24301102)
chr3 (395-445)||(26837363-26837413)
chr3 (392-457)||(23644946-23645010)
chr3 (390-467)||(27394047-27394124)
chr3 (520-568)||(43222517-43222566)
chr3 (395-443)||(5136983-5137031)
chr3 (511-562)||(14654309-14654361)
chr3 (383-443)||(30098257-30098317)
[»] chr1 (60 HSPs)
chr1 (394-568)||(10278550-10278725)
chr1 (391-568)||(1837504-1837681)
chr1 (390-568)||(30786769-30786948)
chr1 (390-568)||(52335880-52336058)
chr1 (390-566)||(4080019-4080195)
chr1 (393-568)||(16298683-16298858)
chr1 (390-568)||(29438928-29439107)
chr1 (395-568)||(37421163-37421338)
chr1 (394-568)||(34555750-34555926)
chr1 (391-568)||(34555378-34555557)
chr1 (392-566)||(2868080-2868254)
chr1 (382-568)||(17641734-17641925)
chr1 (392-568)||(443921-444097)
chr1 (394-568)||(44582059-44582233)
chr1 (395-566)||(8230013-8230184)
chr1 (392-568)||(23340183-23340359)
chr1 (393-568)||(44954596-44954771)
chr1 (384-568)||(37505059-37505244)
chr1 (391-568)||(9992153-9992331)
chr1 (390-568)||(21938561-21938739)
chr1 (392-568)||(37505438-37505613)
chr1 (394-565)||(1744330-1744500)
chr1 (392-568)||(9992525-9992701)
chr1 (394-485)||(50304441-50304532)
chr1 (392-566)||(10278922-10279093)
chr1 (391-556)||(8229636-8229804)
chr1 (395-532)||(39485068-39485203)
chr1 (395-485)||(45048158-45048248)
chr1 (394-556)||(2867913-2868075)
chr1 (391-568)||(29021234-29021412)
chr1 (395-568)||(44954229-44954402)
chr1 (395-545)||(50305176-50305328)
chr1 (391-482)||(44802627-44802718)
chr1 (394-568)||(50926232-50926408)
chr1 (394-568)||(44582427-44582603)
chr1 (384-482)||(23526650-23526748)
chr1 (391-565)||(16299055-16299228)
chr1 (430-566)||(17641403-17641539)
chr1 (391-482)||(50926697-50926788)
chr1 (395-568)||(6224700-6224875)
chr1 (391-484)||(17088593-17088686)
chr1 (395-485)||(37421397-37421488)
chr1 (395-485)||(29439375-29439465)
chr1 (391-485)||(30787251-30787345)
chr1 (396-481)||(25274760-25274845)
chr1 (392-568)||(9833522-9833698)
chr1 (390-465)||(39843497-39843572)
chr1 (395-482)||(45048592-45048678)
chr1 (390-482)||(17088144-17088235)
chr1 (382-482)||(36228783-36228883)
chr1 (394-482)||(44291303-44291391)
chr1 (392-467)||(50419731-50419806)
chr1 (390-445)||(18984611-18984666)
chr1 (390-554)||(48173746-48173911)
chr1 (394-482)||(23526986-23527074)
chr1 (493-568)||(50304882-50304958)
chr1 (390-445)||(52268288-52268343)
chr1 (390-472)||(44291777-44291859)
chr1 (391-467)||(50970277-50970353)
chr1 (393-445)||(5539817-5539869)
[»] chr5 (41 HSPs)
chr5 (386-568)||(18150093-18150276)
chr5 (389-566)||(28289681-28289858)
chr5 (391-568)||(21371066-21371243)
chr5 (393-568)||(32697593-32697771)
chr5 (391-568)||(15029679-15029856)
chr5 (391-568)||(28290014-28290191)
chr5 (396-568)||(38900648-38900818)
chr5 (391-568)||(15115465-15115639)
chr5 (391-568)||(4967139-4967318)
chr5 (392-568)||(19291356-19291533)
chr5 (395-568)||(4966819-4966991)
chr5 (384-545)||(8419015-8419174)
chr5 (392-556)||(38901024-38901186)
chr5 (395-484)||(14340864-14340953)
chr5 (391-527)||(18149732-18149867)
chr5 (390-531)||(5161976-5162117)
chr5 (391-544)||(16752581-16752732)
chr5 (394-556)||(39083361-39083524)
chr5 (390-482)||(41834516-41834607)
chr5 (391-482)||(17260676-17260767)
chr5 (391-482)||(22651767-22651858)
chr5 (430-568)||(5161620-5161759)
chr5 (394-568)||(22651347-22651521)
chr5 (395-472)||(14340401-14340478)
chr5 (405-482)||(32305831-32305908)
chr5 (393-485)||(27307513-27307605)
chr5 (395-482)||(20266371-20266458)
chr5 (393-482)||(10721787-10721875)
chr5 (393-467)||(28494845-28494919)
chr5 (394-463)||(16753045-16753114)
chr5 (391-475)||(28495294-28495378)
chr5 (394-482)||(28595182-28595270)
chr5 (390-545)||(27307059-27307212)
chr5 (392-473)||(4623148-4623229)
chr5 (381-482)||(21370675-21370776)
chr5 (382-445)||(164181-164244)
chr5 (392-472)||(13556995-13557072)
chr5 (497-535)||(21370798-21370836)
chr5 (391-445)||(24362328-24362382)
chr5 (447-484)||(21769597-21769634)
chr5 (524-568)||(22651715-22651760)
[»] scaffold0097 (2 HSPs)
scaffold0097 (385-568)||(46259-46443)
scaffold0097 (391-568)||(46637-46815)
[»] scaffold0712 (2 HSPs)
scaffold0712 (390-568)||(6761-6944)
scaffold0712 (392-568)||(6392-6568)
[»] scaffold0709 (2 HSPs)
scaffold0709 (390-568)||(6779-6962)
scaffold0709 (392-568)||(6410-6586)
[»] scaffold0007 (4 HSPs)
scaffold0007 (390-482)||(210793-210885)
scaffold0007 (394-482)||(205823-205911)
scaffold0007 (395-482)||(204931-205018)
scaffold0007 (395-482)||(205361-205448)
[»] scaffold1432 (1 HSPs)
scaffold1432 (391-485)||(518-612)
[»] scaffold0108 (2 HSPs)
scaffold0108 (392-482)||(15554-15644)
scaffold0108 (390-482)||(15111-15203)
[»] scaffold0025 (1 HSPs)
scaffold0025 (493-568)||(78417-78493)
[»] scaffold0021 (2 HSPs)
scaffold0021 (391-472)||(159019-159099)
scaffold0021 (390-482)||(159337-159429)


Alignment Details
Target: chr2 (Bit Score: 309; Significance: 1e-174; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 19 - 343
Target Start/End: Original strand, 649154 - 649478
Alignment:
Q  19 ctattacatatagatccgctctcacttccccatcaacttgaaccaaactctaaaagcaatggtgtaaaagaactttggcatggaataacggtttttgaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  649154 ctattacatatagatccgctctcacttccccatcaacttgaaccaaactctaaaagcaatggtgtaaaagaactttggcatggaataacggtttttgact 649253  T
Q  119 tgttaatatgaatcagagtgacaattgactttggctttgattaaataacgaggtctgacaatttgattatcatcagctattgtctttccacaaatccttg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  649254 tgttaatatgaatcagagtgacaattgactttggctttgattaaataacgaggtctgacaatttgattatcatcagctattgtctttccacaaatccttg 649353  T
Q  219 agggaatttaatacttgtgcgggctggttagtgaaatatgaagtaggattagaggataacctaatctcttgaagattgagtccaattcctctttcaacta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  649354 agggaatttaatacttgtgcgggctggttagtgaaatatgaagcaggattagaggataacctaatctcttgaagattgtgtccaattcctctttcaacta 649453  T
Q  319 ttcttattgttgactttagcttgtc 343  Q
    ||||||||||| |||||||||||||    
T  649454 ttcttattgtttactttagcttgtc 649478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 381 - 568
Target Start/End: Original strand, 649516 - 649702
Alignment:
Q  381 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  649516 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 649615  T
Q  481 atatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgct 568  Q
    |||||       |||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  649616 atatg-ttttttgcagttttagttctgtctccctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 38007949 - 38008127
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  38007949 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 38008048  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||| || ||||||||    
T  38008049 ttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 42192791 - 42192612
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||        
T  42192791 aaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttt 42192692  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  42192691 tttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 392 - 566
Target Start/End: Original strand, 4355755 - 4355929
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 4355853  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
     |||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  4355854 tgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 16175897 - 16175719
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||| |||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||         
T  16175897 aggcataattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgttttt 16175798  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16175797 ttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 20128284 - 20128107
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||         
T  20128284 aggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatg-tttt 20128186  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||| |||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  20128185 ttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 42192240 - 42192416
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||          
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 42192338  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  42192339 tgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 11539635 - 11539814
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||  | ||||||||||||||||||||||| |||||||||||        
T  11539635 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttt 11539734  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11539735 tttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 11540185 - 11540008
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| |||||||||| | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||         
T  11540185 aggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg-tttt 11540087  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  11540086 ttgcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 33920615 - 33920788
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||       ||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-atttttgc 33920713  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||| |||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 32418157 - 32418333
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||         
T  32418157 aaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat-attt 32418253  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||||||||| | |||||||||||||||||||||||| |||||||  |||||||||| |||||||||||    
T  32418254 tttgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 43216256 - 43216079
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-atttt 43216158  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| |||||  ||||||||||||||||||| ||||| |||||||  |||||||||| |||||||||||    
T  43216157 ttgcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 62956 - 63133
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||         
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatg-tttt 63054  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  63055 ttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 4808882 - 4809055
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||       |     
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatg-ttttttgt 4808980  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 384 - 568
Target Start/End: Complemental strand, 38008505 - 38008321
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||    
T  38008505 aaaaaaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 38008406  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    ||       |||||||||||| ||||| |||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  38008405 tg-ttttttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 395 - 566
Target Start/End: Original strand, 43160012 - 43160184
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||         ||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  43160112 agttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 395 - 553
Target Start/End: Original strand, 15550676 - 15550835
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagt 553  Q
    |||||||||| ||| | ||||||| |||||||||||||||||| ||||||| ||||||||    
T  15550776 agttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagt 15550835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 16953479 - 16953304
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||           
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatg-tttttt 16953381  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||| |||||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 383 - 565
Target Start/End: Original strand, 20127727 - 20127910
Alignment:
Q  383 taaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||| |||||||||||||||||||||||||  ||| |||||||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||    
T  20127727 taaaaaaaaggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 20127826  T
Q  483 atgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
    |||       |||||||||||| ||||| |||||||||||| ||||||||||||| |||||||  |||||||||| ||||||||    
T  20127827 atgtttttttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 9330338 - 9330164
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||       ||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgc 9330239  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||| |||||  |||||| || | ||||||| ||||||||||| |||||||||||    
T  9330238 agttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 33921159 - 33920981
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||  ||||||| |||         
T  33921159 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgttttt 33921060  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  33921059 ttgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 382 - 568
Target Start/End: Complemental strand, 63520 - 63328
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||||||  ||| ||||||| | |||||||||||| || ||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  63520 ataaaaaataggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 63421  T
Q  482 tatg-----nnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||            |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  63420 tatgttttttttttttgcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 390 - 565
Target Start/End: Original strand, 6949449 - 6949625
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||||||||  ||| ||||| ||||||||||| |||||||| || ||||||||||||||||||||||| | |||||||||        
T  6949449 aaggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttt 6949548  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
       |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  6949549 tttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 390 - 566
Target Start/End: Complemental strand, 43160559 - 43160382
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||| ||||||  ||| ||||| ||||||||||| |||||||| || ||||||||||||| ||||||||| |||||||||||        
T  43160559 aaggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttt 43160460  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| |||| ||| |||||    
T  43160459 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 391 - 550
Target Start/End: Complemental strand, 24140221 - 24140068
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||          
T  24140221 aggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat------ 24140128  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgtttt 550  Q
      |||||||||||  ||| | |||||||||||||||||||||||||| ||||||| ||||    
T  24140127 ttgcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttt 24140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 484
Target Start/End: Complemental strand, 25336147 - 25336054
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  25336147 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatat 25336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 4356303 - 4356126
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| || || ||||||||||||||||||||||| |||||||||||         
T  4356303 aggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 4356205  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||| |  ||| | |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  4356204 ttgcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 6949990 - 6949898
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatat 6949898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 44219643 - 44219820
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||| ||| |||| |||||||| ||| || |||||||| |||||||||||||||||| |||| |||| ||||||         
T  44219643 aggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatg-tttt 44219741  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||||||  ||||||||||    
T  44219742 ttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 44220193 - 44220013
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||        
T  44220193 aaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg-ttt 44220095  T
Q  490 nnngcagttttagtcatatct--tcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
       | ||||||||||||||||   |||||||||||||||||||||| ||| ||||||   |||||||||| |||||||||||    
T  44220094 tttgtagttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 16952933 - 16953113
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnn 488  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||||||||||        
T  16952933 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 16953032  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        || ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| | |||||||||    
T  16953033 ttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 17060904 - 17061084
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnn 488  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||||||||||        
T  17060904 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 17061003  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        || ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| | |||||||||    
T  17061004 ttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 568
Target Start/End: Complemental strand, 4809433 - 4809249
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| |||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||||  | |||||||| ||||||| |||||| |||||||||    
T  4809433 aaaaaaaaggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactata 4809334  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||       |||||||||||| ||||| ||||||||||||| || ||| ||||| ||||||| ||||||||||| |||||||||||    
T  4809333 tg-ttttttgcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 424 - 554
Target Start/End: Original strand, 13399454 - 13399584
Alignment:
Q  424 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaac 523  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||       |||||||||||| ||||| ||||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatg-ttttttgcagttttagtcctatctccctatttccaac 13399552  T
Q  524 tccagaaacgcacataaatgac-gttttagtc 554  Q
    |||||||||||||| ||||||| |||||||||    
T  13399553 tccagaaacgcacagaaatgacagttttagtc 13399584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 5561083 - 5560920
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||| |||||||||||||||| || || |||||||||||||| |||||||||||||||||||          |||||||||||||||       ||    
T  5561083 ttaattacccttttggtccttgcattttaactaactcacgaaattgatcctacctcttttaaatcg----------tccctaaactatatgtttttt-gc 5560995  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  5560994 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 13315496 - 13315673
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nnnnnnn 492  Q
    |||||||||||||| |||||  ||| |||||||||||| |||| ||||| || || ||||||||||||||||||||||| |||||||||||             
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  493 gcagttttagtcatatcttcctatttccaactccag-aaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| ||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||||||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 15551218 - 15551044
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||||| |||  ||| ||||||||||||| ||| ||||| ||  | ||||||||||||||||||||||| |||  ||||||       ||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| |  ||||||||||| |||| ||||||    
T  15551118 agttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 391 - 535
Target Start/End: Complemental strand, 32418693 - 32418550
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| ||||||||||||  ||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||          
T  32418693 aggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatat-atttt 32418595  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgca 535  Q
      ||||||||| || ||||| |||||||||||||| |||||||||    
T  32418594 ttgcagttttaatcttatctccctatttccaactctagaaacgca 32418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 13399966 - 13399790
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||| || |||| |||||  ||| ||||||||||||||||| ||||| ||  |||||||||||||||||||| |||| ||||||||||          
T  13399966 aggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatat-atttt 13399869  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||||| |||||||||||||||| ||||||| | ||||||| |||||| |||| |||||||||||    
T  13399868 ttgcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 391 - 545
Target Start/End: Complemental strand, 28143576 - 28143424
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnn 489  Q
    |||||||||| ||||||||||||| |||| ||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||        
T  28143576 aggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg--tt 28143479  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
       |||||||||||| || | |||||||| |||||||||||||||| | |||||||    
T  28143478 tttgcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgac 28143424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 384 - 545
Target Start/End: Complemental strand, 31797331 - 31797172
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||| ||||||||| ||||| | ||||||| ||||||||||||| |||||||||||||||    
T  31797331 aaaaaaaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactata 31797232  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    ||       |||||||||||| || | |||||||| |||||| ||||||||| | |||||||    
T  31797231 tg-ttttttgcagttttagtccta-cctcctattttcaactctagaaacgcagagaaatgac 31797172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 484
Target Start/End: Original strand, 5560049 - 5560143
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| || || |||||||| |||||||||||||| ||||||||||    
T  5560049 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatat 5560143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 649881 - 649802
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 473  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| ||||||||  | |||||||||||||||||||||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcc 649802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 20495196 - 20495283
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||| |||||||||| || |||| ||||||||||||||||| || || | ||||||||||||| ||||||||||||||||||||||    
T  20495196 ttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 2190612 - 2190536
Alignment:
Q  402 cacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 478  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 391 - 478
Target Start/End: Complemental strand, 14942393 - 14942306
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 478  Q
    |||||||||||||||||||||| | |||| ||||||| ||||||||| ||||| |  |||||| |||||||||||||| |||| ||||    
T  14942393 aggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaa 14942306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 467
Target Start/End: Complemental strand, 3824259 - 3824179
Alignment:
Q  387 aacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||| ||||||| |||||||||| | |||| || |||||||||||||||||||| | ||  |||||||||||||||||    
T  3824259 aacaaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 22445642 - 22445816
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta-tatgnnnnnnng 493  Q
    |||||||||||||||||| |||||| |||| ||||| |  ||||||||| ||||  | ||||||||||||||| ||||| |||| || | |             
T  22445642 ttaattacacttttggtc-ttgcattttgatcaacttataaaattggtcataccattattaaatcgaacaaaaccgtccttaaattaatgttttttttta 22445740  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||  ||||| ||||||| ||||| ||||||| |||||||||||| ||||||||| | |||||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgct 22445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 566
Target Start/End: Original strand, 43215809 - 43215883
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||||||||||| ||||||| |||||||| ||||| | | ||||||| ||||||||||| |||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaa 466  Q
    |||||||||||||||||||| |||| || ||||||||| ||||||| |||| ||  ||||||| ||||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 1978655 - 1978601
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||||||||||||||||||||  | ||| || ||||||||||||||||||    
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 1978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 9747519 - 9747596
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||| |||||||| |||| |||| |||||   |||||||||||||| || ||| ||||||||| |||||||    
T  9747519 aaggcttaattgcacttttgatcctcgcattttgacatgctcacgaaattggttctgccttttttaaatccaacaaaa 9747596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 467
Target Start/End: Original strand, 8425358 - 8425430
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||||||||||||||  | ||| || |||||||||||||||| ||||| ||| |||  ||||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaa 8425430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 445
Target Start/End: Original strand, 20444738 - 20444802
Alignment:
Q  381 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||  ||||||||||||||||||||||||| |  | ||| ||||||||||||| |||||||    
T  20444738 cataaaagaaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 481
Target Start/End: Complemental strand, 5037202 - 5037155
Alignment:
Q  434 gaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||| ||||| | |||||||||||| ||||||||||||||||||||||    
T  5037202 gaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaacta 5037155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 482
Target Start/End: Original strand, 5035903 - 5035953
Alignment:
Q  432 acgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||| |||||||  || ||||||||||||||||| ||||||||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactat 5035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 20440577 - 20440523
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | ||| ||||||||||||| |||||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 18450821 - 18450882
Alignment:
Q  383 taaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcc 444  Q
    |||||| ||||||||||||||||||||||||| |  | ||| || |||||||||| ||||||    
T  18450821 taaaaagaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 18450882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 7446332 - 7446364
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtcct 414  Q
    |||||||||||||||||||||||||||| ||||    
T  7446332 ataaaaacaaggcttaattacacttttgatcct 7446364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 9329985 - 9330033
Alignment:
Q  497 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    |||||||| ||||| | |||||||||||| ||||||||||| |||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgac 9330033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 22374871 - 22374819
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtc 443  Q
    |||||||||||||||||||||||| |  | ||| || ||||||||||||||||    
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 22374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 4e-67; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 46737202 - 46737024
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  46737202 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 46737104  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgcta 569  Q
      |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  46737103 ttgcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgcta 46737024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 34789927 - 34789752
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttg 34789828  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  34789827 cagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 34807115 - 34807293
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||         
T  34807115 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttttt 34807214  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34807215 ttgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 391 - 565
Target Start/End: Original strand, 33689828 - 33690001
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||         
T  33689828 aggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg--ttt 33689925  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
      |||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||| ||||||||    
T  33689926 ttgcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 24852010 - 24851835
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 24851911  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatg-acgttttagtccagccacctatgct 568  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||| | |||||||| || |||||||||||    
T  24851910 cagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 55677506 - 55677327
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        
T  55677506 aaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttt 55677407  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        || |||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||    
T  55677406 tttacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 382 - 555
Target Start/End: Original strand, 19528859 - 19529033
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19528859 ataaaaaataggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaacta 19528958  T
Q  482 tatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcc 555  Q
    ||||       |||||||||||| ||||| ||||||||||||||| |||||||||| ||||||| ||||||||||    
T  19528959 tatgtttttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 21034785 - 21034606
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||         
T  21034785 aaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttt 21034686  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||  ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  21034685 tttgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 28465083 - 28465257
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||       |    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 28465181  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  28465182 cagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 54440573 - 54440745
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgt---tttttg 54440669  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| ||||||| ||||| |||||| ||||| ||||||| ||||||||||| |||||||||||    
T  54440670 cagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 14439831 - 14440004
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||       ||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatg-ttttttgc 14439929  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  14439930 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 392 - 564
Target Start/End: Original strand, 21034235 - 21034408
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  21034235 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 21034334  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccaccta 564  Q
      ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  21034335 tacagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 12593570 - 12593393
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||          
T  12593570 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat-atttt 12593472  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| ||||||| ||||||||||||||||||  |||||| ||||||||||| |||| ||||||    
T  12593471 ttgcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 34789382 - 34789558
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  34789382 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 34789480  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34789481 tgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 45838546 - 45838723
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||| |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||         
T  45838546 aggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 45838644  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| ||||||||| ||| || ||||||||| ||||||  ||||| ||||| |||||||||||    
T  45838645 ttgcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 382 - 568
Target Start/End: Complemental strand, 45839105 - 45838917
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    ||||||| |||| ||||||||||||||||||||   || |||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||    
T  45839105 ataaaaaaaaggtttaattacacttttggtcctactattttgaccaactcacgaaat-ggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 45839007  T
Q  482 tatg--nnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||         |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  45839006 tatgtttttttttgcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 382 - 566
Target Start/End: Original strand, 12593014 - 12593198
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||||||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||    
T  12593014 ataaaaacaaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaacta 12593113  T
Q  482 tatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    ||||       ||| ||||| || ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  12593114 tatg-ttttttgcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 14440374 - 14440198
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||| ||||||||||||  ||| |||||||||| |||||| |||||||| || ||||||||||||||||||| ||| |||||||||||          
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatg-ttttt 14440276  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  14440275 tgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 28465627 - 28465451
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  28465627 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 28465529  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaat-gacgttttagtccagccacctatgct 568  Q
     ||| |||||||| ||||| |||||||||||||||| |||||||||||||| |  ||||||||||| |||||||||||    
T  28465528 tgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 36168327 - 36168506
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nn 487  Q
    |||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||        
T  36168327 aaggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgtttt 36168426  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
         |||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| ||| ||||||| |||||||||    
T  36168427 tttttgcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 56077870 - 56077695
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||          
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 56077772  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgc 567  Q
     |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||    
T  56077771 tgcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 384 - 568
Target Start/End: Original strand, 41114149 - 41114335
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    |||||||||| ||||| ||||||||||||||  ||| |||||||||||||||||  ||||||| || ||||||||||||||||| ||||| |||||||||    
T  41114149 aaaaacaaggtttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactata 41114248  T
Q  484 tg-nnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||        |||||||||||||||||| |||||||||||||| ||||||||||| |||||||  |||||||||| |||||||||||    
T  41114249 tgttttttttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 54441113 - 54440939
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||  ||| |||| || ||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||       |    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 54441015  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||    
T  54441014 cagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 26974281 - 26974460
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||  ||| || || ||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        
T  26974281 aaggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 26974380  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  26974381 tttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 395 - 521
Target Start/End: Complemental strand, 26974788 - 26974662
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| ||||  || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  495 agttttagtcatatcttcctatttcca 521  Q
    |||||||||||||||||||||||||||    
T  26974688 agttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 41608377 - 41608551
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nnnnnnn 492  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||             
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgttttttttt 41608474  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| | ||||||||||| || ||||||||| ||||||| ||||||||||| |||||||||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 6616670 - 6616849
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| ||||||||||||||||| ||  ||| |||| |||||||||||| ||||| ||  | ||||||||||||||||||||||| |||||||||||        
T  6616670 aaggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgtttt 6616769  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       || || |||||| || ||  ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6616770 tttgctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 6617205 - 6617070
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||| | ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        ||    
T  6617205 ttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat-tttttttgc 6617107  T
Q  495 agttttagtcatatcttcctatttccaactccagaaa 531  Q
    |||||||||| ||||| ||||| ||||||||||||||    
T  6617106 agttttagtcctatctccctatctccaactccagaaa 6617070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 483
Target Start/End: Complemental strand, 41608962 - 41608870
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  41608962 aggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 545
Target Start/End: Original strand, 35193322 - 35193459
Alignment:
Q  406 tttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagttttagtca 505  Q
    ||||||||| |||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||     
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-ttttttgcagttttagtcc 35193420  T
Q  506 tatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    |||| |||||||| ||||| |||||||||| | |||||||    
T  35193421 tatc-tcctattttcaacttcagaaacgcagagaaatgac 35193459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 46736653 - 46736829
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||| ||||||||| ||   || ||||||||||||||||| ||||| ||  | |||||||||||||||||| |||| |||||||||||        
T  46736653 aaggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg-ttt 46736751  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
       |||| |||| || ||||| ||||||| |||||||||||||||||| ||||||| |||||||| || |||| ||||    
T  46736752 tttgcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 16215038 - 16214865
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||| ||||||||||||  ||| |||| ||||| |||||| || || || || |||||||| ||| |||||||||| ||||||||||        ||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat-attttttgc 16214940  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    ||||||| |  ||||||||||||| ||||||||||||| |||||||||||  ||||||||||| |||||||||||    
T  16214939 agttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 19529241 - 19529063
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||  ||| |||||||||| |  ||| || | ||| ||||||||||| |||||||||||||  |||||||||||         
T  19529241 aggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgttttt 19529142  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||  ||||| | |||||||||||  | ||||||||| ||||||| ||||||||||| ||| |||||||    
T  19529141 ttgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 28166007 - 28166180
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||| | ||||||||||   || ||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||        ||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-tttttttgc 28166105  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||| ||||| || ||||||||| ||||||  |||||| | || |||||||||||    
T  28166106 agttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 483
Target Start/End: Original strand, 24851315 - 24851407
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||||||| |||| ||| || |||||||| |||||||||||||| |||||||||    
T  24851315 aggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 30598065 - 30597973
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    ||||| ||||||||||||||||| |  | |||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||| |||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaat 458  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 36168878 - 36168701
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||| || |||||  | |||||||| |||||||||  | | |||| ||||||         
T  36168878 aggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgttttt 36168779  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      || ||||||||| ||||| ||||||| |||||||| ||| |||||||||| || ||||||||||| |||||||||||    
T  36168778 t-gcggttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 229707 - 229529
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnn 488  Q
    |||| |||||||||||||||||| | |||| ||||||| ||||||||| ||||| | ||||||| ||||| ||||||||||||| |||||||| |||       
T  229707 aaggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg--t 229610  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        ||||||||| || || || | ||||| |||||||||||||||||| || ||||  ||||||| || |||||||||||    
T  229609 ttttgcagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 493 - 566
Target Start/End: Original strand, 24851565 - 24851639
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 421 - 568
Target Start/End: Complemental strand, 34807656 - 34807509
Alignment:
Q  421 ttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttcc 520  Q
    |||| |||||||||||| |  | ||| || |||||| |||||||||||||||| |||||||||||       |||||||||||| ||||| |||||||||    
T  34807656 ttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttg-gcagttttagtcctatctccctatttcc 34807558  T
Q  521 aactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||| ||||||| | ||||||| ||||||||||| |||| ||||||    
T  34807557 aactccataaacgcatagaaatgacagttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 51310053 - 51309961
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||| ||||||||||||| |||| || |||| ||||||||| ||||| | ||||||| |||||||||||||  |||||||||||||    
T  51310053 aaggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactat 51309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 527
Target Start/End: Complemental strand, 33778156 - 33778024
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||| || ||  ||| ||||| ||||||||||| || | |||||||||||||||| ||||||||||| |||||| ||||||       |    
T  33778156 cttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatg-ttttttg 33778058  T
Q  494 cagttttagtcatatcttcctatttccaactcca 527  Q
    ||||||||||  ||||| ||||||||||||||||    
T  33778057 cagttttagttctatctccctatttccaactcca 33778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 35193849 - 35193759
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||| ||||||| ||||||| ||||| ||||||| ||| ||||||||||    
T  35193849 aggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgt-cctaaactat 35193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 485
Target Start/End: Original strand, 40160092 - 40160187
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||||| ||||| |||  |||| || |||| ||||||||| | ||| | ||||||||||||||||||||| |||||||||||||||||    
T  40160092 aaggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatg 40160187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 10795854 - 10795769
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    ||||||||||||||| |||  |||| |||| || |||||||||||||||||  |||||| |||||||||||||||||| |||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtctctaaact 10795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 24335760 - 24335836
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||| | ||||||| |||||||||||||    
T  24335760 aggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 478
Target Start/End: Complemental strand, 24336307 - 24336223
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 478  Q
    |||||||||||||||| |||| |||| ||||| | ||||||||| ||||||| ||||||| ||||||||||||| ||| ||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaa 24336223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 35643667 - 35643743
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 229164 - 229251
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||| | || ||||||| ||| ||||| ||||| | ||||||| |||| |||||||||||||| ||||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactat 229251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 40160633 - 40160547
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| | ||| | ||||||| |||| |||||||| ||| ||||||||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgt-cctaaactat 40160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 480
Target Start/End: Original strand, 1397597 - 1397683
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    |||||||||||||||| |||   ||| ||||||||||||  ||| |||||||| || ||||||||||||||||||||||| ||||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 33777635 - 33777725
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||| ||||  ||| ||||||||||||||||| || || ||  | ||| ||||||||||||||||||| |||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatg 33777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 23986521 - 23986610
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||| |||||||||||||  ||| ||||||| ||||||||| ||||| |  |||||| |||||||||||||  |||||||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactat 23986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 17503972 - 17504063
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||| ||| |||||||| |||| ||||||| ||||||||| ||||||| ||||||| |||| ||||| || ||| ||||||||||    
T  17503972 aaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgt-cctaaactat 17504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 17504468 - 17504412
Alignment:
Q  429 ctcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  17504468 ctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 51641374 - 51641302
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaa 466  Q
    ||||||||||||||| |||||||||| | ||| |||||||||||||| |||| ||| ||||||||| ||||||    
T  51641374 cttaattacacttttagtccttgcatttagacaaactcacgaaattgatcctgccttttttaaatcaaacaaa 51641302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 44219377 - 44219448
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaa 465  Q
    ||||||||||||||||||||| | || || ||||||||||||||||||||||  || |||||||| ||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 35643558 - 35643648
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||| ||||| |||||| |  ||| ||||||||||||||||| |||||||| || ||| |||| ||| |||||||||| |||||||||||    
T  35643558 ttaatcacactattggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatg 35643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 556
Target Start/End: Original strand, 18965141 - 18965304
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnnnn 491  Q
    ||||||||||| ||||| ||||  ||| || ||  ||||||||||  |||| | ||||||| ||||||||||||||||||| |||||||| |||          
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg--tttt 18965238  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
     |||||||||||  || || | ||||| |||||| ||||||||| ||||||||| |||||||||||    
T  18965239 tgcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtcca 18965304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 25938218 - 25938163
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||||||  | ||| || ||||||||||||||||||    
T  25938218 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 25938163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 51640958 - 51641034
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaa 466  Q
    |||| ||||||||| |||||||  | || | | ||||||||||| ||||||||||| ||| ||||||||||||||||    
T  51640958 aaggtttaattacatttttggttttcgcttttagaccaactcacaaaattggtcctgccttttttaaatcgaacaaa 51641034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 2118295 - 2118346
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||  | ||| || ||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 2118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 561
Target Start/End: Complemental strand, 18965580 - 18965513
Alignment:
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccac 561  Q
    |||||||||||||    ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||    
T  18965580 agttttagtcatactcccctattttcaactccataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 414
Target Start/End: Complemental strand, 16318329 - 16318299
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtcct 414  Q
    |||||||||||||||||||||||||||||||    
T  16318329 aaaaacaaggcttaattacacttttggtcct 16318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 31297203 - 31297161
Alignment:
Q  424 accaactcacgaaattggtcctacctcttttaaatcgaacaaa 466  Q
    |||||||||||||||||||| | ||| ||||||||||||||||    
T  31297203 accaactcacgaaattggtcatgccttttttaaatcgaacaaa 31297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 16691616 - 16691555
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttt 453  Q
    |||||||||||||||||| ||| ||  | |||||| |||||||||| ||||||| |||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctcttt 16691555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Original strand, 30596294 - 30596343
Alignment:
Q  435 aaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||||| ||||  ||||||||||||||||||||| || ||||||||||||    
T  30596294 aaattgatcctgtctcttttaaatcgaacaaaattgttcctaaactatat 30596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 46193405 - 46193458
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||||||||||||||||| |  | ||| || ||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 46193458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 10258446 - 10258410
Alignment:
Q  378 caacataaaaacaaggcttaattacacttttggtcct 414  Q
    ||||||||| | |||||||||||||||||||||||||    
T  10258446 caacataaatataaggcttaattacacttttggtcct 10258410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 529
Target Start/End: Complemental strand, 35644004 - 35643968
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccaga 529  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  35644004 gcagttttagtcttatctccctatttccaactccaga 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 51021351 - 51021287
Alignment:
Q  381 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||  ||||||||||||||||||| |||| |  | ||| || ||||||||||||||||||    
T  51021351 cataaaaaataggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcct 51021287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 1e-61; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 383 - 568
Target Start/End: Complemental strand, 31574280 - 31574095
Alignment:
Q  383 taaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  31574280 taaaaaaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat 31574181  T
Q  483 atgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||       |||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  31574180 atg-ttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 31073688 - 31073512
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||          
T  31073688 ggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatg-ttttg 31073590  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  31073589 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 391 - 545
Target Start/End: Complemental strand, 5121016 - 5120863
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||         
T  5121016 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 5120918  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
      |||||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  5120917 ttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgac 5120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 25472559 - 25472382
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||          
T  25472559 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 25472460  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  25472459 tgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 25468852 - 25469027
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnnnnng 493  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||        |    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttg 25468951  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| |||||||  || |||||||||||||| ||||||| |||||| |||| |||||||||||    
T  25468952 cagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 5114466 - 5114644
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||| ||||  ||| |||| |||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        
T  5114466 aaggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 5114564  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| |||||||| || |||||||||||    
T  5114565 tttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 29891079 - 29891256
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||| ||| ||||| |||| ||||||||| || ||||||||||||| ||||||||| |||||||||||||||||         
T  29891079 aggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgttttt 29891178  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       || ||||| |  ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  29891179 ta-caattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 537
Target Start/End: Original strand, 28636292 - 28636435
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||| |||||||| ||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||          
T  28636292 ggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg--tttt 28636389  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcaca 537  Q
     |||||||||||||||||| |||||||||||||||| ||| |||||    
T  28636390 tgcagttttagtcatatctccctatttccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 24640728 - 24640555
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||| ||||||||||||  ||| |||| |||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||       ||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 24640630  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| |||||||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||||    
T  24640629 agttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 30251239 - 30251064
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||   || ||||||||||||| ||| | ||| || || ||||||||||||||||||||||| |||||||| ||         
T  30251239 aggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtattt 30251140  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
      | |||||||||| ||||| |||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||    
T  30251139 ttgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 31573719 - 31573901
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctctttt-aaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||||||| | ||||||  | |||| ||||||||||||||||| | |||||||||||        
T  31573719 aggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgtttt 31573818  T
Q  490 nnn---gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
          |||||||||||| ||||| |||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||    
T  31573819 ttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 533
Target Start/End: Original strand, 31073143 - 31073290
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatc------gtccctaaactatatg 485  Q
    ||||||||||||||||||||||||  || ||||||||| || |||| |||||||| || |||||||||||||||||||      |||| ||||||||||     
T  31073143 ggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaactatatt 31073242  T
Q  486 nnnnnnngcagttttagtcatatcttcctatttccaactccagaaacg 533  Q
           |||||||||||||||||||||||||||||||||||||||||    
T  31073243 attttttgcagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 35163741 - 35163640
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||| ||||||||| |||| || ||||||| ||||| |||||||||||||||||||||||    
T  35163741 aaaaaaaaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactata 35163642  T
Q  484 tg 485  Q
    ||    
T  35163641 tg 35163640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 29891631 - 29891453
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctctttta----aatcgaacaaaatcgtccctaaactatatgn 486  Q
    ||||||||||||||||||||||||  ||| |||||||||||  |||| |||||||   |  ||||    ||| |||||||||||||| |||||||||||     
T  29891631 aggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgt 29891532  T
Q  487 nnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctat 565  Q
          |||||||||||| ||||| |||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||    
T  29891531 ttttt-gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 493 - 568
Target Start/End: Complemental strand, 28636642 - 28636566
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 485
Target Start/End: Complemental strand, 32836542 - 32836449
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||| ||||| | ||||||| ||||||||||||| ||| | |||||| ||||    
T  32836542 ggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatg 32836449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 30250722 - 30250775
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtccta 446  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 32836010 - 32836096
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||  |||||| ||||||| ||||||||||||| ||| ||||||||||    
T  32836010 ttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgt-cctaaactat 32836096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 835384 - 835484
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||||||  |||||||||| |||||||||||||  ||| || | || ||||||||| ||||| | ||||||| |||||||||||||  ||||||||||||    
T  835384 ataaaaattaggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaacta 835483  T
Q  482 t 482  Q
    |    
T  835484 t 835484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 33095716 - 33095804
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||| ||||||||||||| |||| || | || ||| ||||| |||||  |||||||| ||||||||||||| ||||||||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactat 33095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 31242809 - 31242896
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||  ||| |||| ||||||||||||||||| || |||| ||| |||||||||||||| ||  ||||| |||||||    
T  31242809 ttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaactat 31242896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 835772 - 835695
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaat 468  Q
    |||||||||| ||||||||||||| |||| || | || || |||||| ||||||| ||||||| ||||||||||||||    
T  835772 aggcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 22534270 - 22534217
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||||||||||||||||| | || ||||||||||||||||| |||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 473
Target Start/End: Complemental strand, 3835273 - 3835190
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 473  Q
    |||| ||||||||||||||||||| ||  | |||||| |||||||||| ||||||| ||||||| |||  ||||||||| ||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcc 3835190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 35163187 - 35163273
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||| ||||| |||| ||||||| ||||| ||| ||||| |  |||||| ||||||||||||| ||| ||||||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgt-cctaaactat 35163273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 467
Target Start/End: Original strand, 23073996 - 23074074
Alignment:
Q  389 caaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    |||||||||||||||||||||||||| |  | ||| || |||||||||| ||||||| ||  ||| |||| ||||||||    
T  23073996 caaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 23074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 28472636 - 28472690
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | ||| ||||||||||||| |||||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 28472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 29859825 - 29859879
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | ||| ||||||||||||| |||||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 29859879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 556
Target Start/End: Original strand, 30250810 - 30250855
Alignment:
Q  512 cctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  30250810 cctatttccaactacagaaacgcacagaaatgacagttttagtcca 30250855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 11445533 - 11445457
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    |||||||||||||||||||||||| |  | ||| || |||||||||| ||||||| ||| ||| |||  ||||||||    
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaa 11445457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 4e-61; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 28254971 - 28254796
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-aattttt 28254873  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 390 - 564
Target Start/End: Original strand, 599530 - 599704
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||        
T  599530 aaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatg-ttt 599628  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccaccta 564  Q
       |||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  599629 tttgcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 9796726 - 9796902
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||          
T  9796726 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatg-ttttt 9796824  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  9796825 tgcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 34799630 - 34799453
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||         
T  34799630 aggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg-tttt 34799532  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
      |||||||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||| || |||||||||||    
T  34799531 ttgcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 41260808 - 41260631
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| |||||||||| |||||| |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||         
T  41260808 aggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 41260710  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  41260709 ttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 391 - 527
Target Start/End: Original strand, 15255852 - 15255987
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  15255852 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 15255950  T
Q  491 nngcagttttagtcatatcttcctatttccaactcca 527  Q
      |||||||||||| ||||| ||||||||||||||||    
T  15255951 ttgcagttttagtcctatctccctatttccaactcca 15255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 385 - 568
Target Start/End: Complemental strand, 18428315 - 18428131
Alignment:
Q  385 aaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||| |||| ||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||    
T  18428315 aaaaaaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 18428216  T
Q  485 gnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |       ||||||||| || ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  18428215 gtttttttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 35427359 - 35427182
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||          
T  35427359 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat-atttt 35427261  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||||||  |||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  35427260 ttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 567
Target Start/End: Complemental strand, 6115658 - 6115481
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  6115658 aggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 6115559  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgc 567  Q
      | |||||||||  ||||| | ||||| |||||| ||||||||||| ||||||| ||||||||||| |||| |||||    
T  6115558 ttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 18049590 - 18049767
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||| ||||||||||||||||||  ||| ||||||||||||||||| |||| ||| || ||||||||||||||||||||||| |||||||||||          
T  18049590 ggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18049689  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||    
T  18049690 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 18050134 - 18049961
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||    
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 18050036  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||| || ||||| ||||||| |||||||||||||||||| |||| || |||||| |||| |||||||||||    
T  18050035 tgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 391 - 535
Target Start/End: Original strand, 16578107 - 16578250
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  16578107 aggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-tttt 16578205  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgca 535  Q
      |||||||| ||| ||||| ||||||||||||||||||||||||    
T  16578206 ttgcagttttggtcctatctccctatttccaactccagaaacgca 16578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 7911162 - 7910986
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||  |||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||           
T  7911162 ggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat-attttt 7911064  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||   |||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  7911063 tgcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 28254427 - 28254602
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||  ||| |||| |||||||||||| |||||||| || |||||||| |||||||||||||| |||||||||||       |    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttg 28254526  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| |||||||||||||||||||||||| | |||||||  |||||||||| |||||||||||    
T  28254527 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 5731356 - 5731182
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||| |||||| ||| |||||| |||||||||||| ||||||||| |||||| || |||||||||||||||||||| |||||||||||       |    
T  5731356 cttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatg-ttttttg 5731258  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||  ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5731257 cagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 34799078 - 34799256
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||||||| |  ||| |||||||||||| |||| ||||||||  | |||||||||||||||| |||||| |||||||||||         
T  34799078 aggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgttttt 34799177  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||||||| |||||||||||||||||  |||||||||| |||||||||||    
T  34799178 ttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 391 - 563
Target Start/End: Complemental strand, 15256378 - 15256203
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nnn 488  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||||||||         
T  15256378 aggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 15256279  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacct 563  Q
        |||||| ||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||| ||||||    
T  15256278 ttttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 393 - 568
Target Start/End: Original strand, 42035773 - 42035948
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||            
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat-atatttt 42035871  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||| |||||||| ||||| |||||||| ||||||| ||||||||| ||||||| ||||||||||| |||| ||||||    
T  42035872 gcaattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 393 - 568
Target Start/End: Original strand, 35693869 - 35694046
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-gnnnnnn 491  Q
    ||||||||||||||||| ||||||||| |||||||| | |||||| || | ||||||||||||||||||| |||||||||| ||||||||||            
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  35693969 ttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 42036319 - 42036144
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| ||||||  || | |||| |||||||||| |||||| || || |||||||||||||||||||||||||||||||||||||||||         
T  42036319 aggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 42036220  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
      |||||||||||| |||  || |||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||    
T  42036219 ttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 9797270 - 9797096
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||  ||| ||||||||||||||||| |||| ||| || ||||||||| || |||||||||| |||||||||||       ||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgc 9797171  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||  ||||| |||||||||||||||| ||||||||| ||||||| ||||||||| | |||||||||||    
T  9797170 agttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 391 - 565
Target Start/End: Original strand, 26252810 - 26252982
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| || ||||||  |||| || |||||||||||||   | ||||||||||||||||||||||||||||||||||||||         
T  26252810 aggcttaattacacttttgatctttgcat--tgactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 26252906  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
      |||||||||||| ||||| ||||||||||||||||||||||| || ||||||| | ||||||||| ||||||||    
T  26252907 gtgcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 600045 - 599867
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| |||||||||| |||||| ||||| || || |||||||| |||||||||||||| |||||||||||         
T  600045 aggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatg-tttt 599947  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgcta 569  Q
      |||||||||||| |||||  |||||||||| |||||||||||| | ||||||| ||||||||||| |||| |||||||    
T  599946 ttgcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgcta 599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 395 - 566
Target Start/End: Complemental strand, 35694421 - 35694242
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata-------tgnn 487  Q
    ||||||||||||||||||||| ||| ||||| ||||||| ||| ||||||||| | ||||||||||||||||||||||| |||||||||       |       
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttttttttt 35694322  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
         || ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  35694321 tttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 390 - 531
Target Start/End: Original strand, 41260269 - 41260409
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||  ||| |||||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||||||||        
T  41260269 aaggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 41260367  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaa 531  Q
       |||||||||||| ||||| |||||||||||||| |||||    
T  41260368 tttgcagttttagtcttatctccctatttccaactctagaaa 41260409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 16578643 - 16578466
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||  || || ||| ||||||||||||||| ||  |||||||||||         
T  16578643 aggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgttttt 16578544  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||| | ||||||||||| ||||||| ||||||||||| |||||||||||    
T  16578543 t-gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 390 - 485
Target Start/End: Original strand, 18674146 - 18674241
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||||||| ||||||||||||  |||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  18674146 aaggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 2208716 - 2208891
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||| | |||||| || ||||||||||||||||||||||| ||||||||||             
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttta 2208815  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    || |||||||||||||| ||||||| ||| |||||||||| ||| |||| |  ||||||||||| |||||||||||    
T  2208816 caattttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 391 - 554
Target Start/End: Original strand, 5730816 - 5730979
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| | |||||| || ||||||||| ||||||||||||| |||||||||||         
T  5730816 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg-tttt 5730914  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtc 554  Q
      || ||||||||| || || |||||||  ||||||||||||| ||| ||||||| |||||||||    
T  5730915 ttgctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 390 - 485
Target Start/End: Original strand, 7910614 - 7910709
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||||| ||||||||||  ||| |||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||    
T  7910614 aaggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg 7910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 28877437 - 28877350
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaa 477  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||| ||||  ||||||||| |||| ||||||||| ||||||||    
T  28877437 aaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaa 28877350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 28876901 - 28876993
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||| ||| |||||||||||||||| |||| |||| || ||||||||| |  | || ||||||| ||||||||||||||||||||||||||||    
T  28876901 aaggtttatttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactat 28876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 18805167 - 18805256
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||| ||||| ||||| | ||||||||| |||| ||  ||||||||||||||||||||  |||||  |||||||||    
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatg 18805256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 9930213 - 9930112
Alignment:
Q  381 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    |||||||  ||||||||||||||||||||||||| | || ||| || |||||||||| ||||||| ||  ||| |||| ||||||||| |||| | ||||    
T  9930213 cataaaataaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaact 9930114  T
Q  481 at 482  Q
    ||    
T  9930113 at 9930112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 512 - 568
Target Start/End: Original strand, 35163817 - 35163874
Alignment:
Q  512 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  35163817 cctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 568
Target Start/End: Original strand, 35426917 - 35426989
Alignment:
Q  497 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||| || ||||| |||||||||||||||| ||||||||| ||||||| ||||||||| | |||| ||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 35426845 - 35426895
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||| |||||  ||| ||||||||||||||||| |||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 33742921 - 33742973
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtc 443  Q
    |||||||||||||||||||||||| |  | |||||| |||||||||| |||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtc 33742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 6e-60; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 25637196 - 25637374
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  25637196 aggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 25637295  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      | |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||    
T  25637296 ttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 27245203 - 27245380
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||          
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttt 27245302  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| | |||||||||||||||||||||||| ||||||  ||||||||||| |||||||||||    
T  27245303 tgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 398 - 544
Target Start/End: Complemental strand, 35161342 - 35161196
Alignment:
Q  398 attacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagt 497  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  498 tttagtcatatcttcctatttccaactccagaaacgcacataaatga 544  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35161242 tttagtcatatctccctatttccaactccataaacgcacataaatga 35161196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 7732487 - 7732664
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         
T  7732487 aggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-tttt 7732585  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| ||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  7732586 ttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 389 - 566
Target Start/End: Complemental strand, 16081848 - 16081671
Alignment:
Q  389 caaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnn 488  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||       
T  16081848 caaggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatg-tt 16081750  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
        |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||| ||||    
T  16081749 ttttgcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 28688041 - 28687869
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||       ||    
T  28688041 ttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 28687944  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    | |||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  28687943 acttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 48247586 - 48247767
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata---tgnn 487  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||   |       
T  48247586 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattttt 48247685  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
         |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  48247686 tttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 9181960 - 9181779
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nn 487  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        
T  9181960 aaggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 9181861  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
          ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  9181860 tttttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 392 - 566
Target Start/End: Complemental strand, 26048492 - 26048319
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||          
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatg--tttt 26048395  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
     |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||    
T  26048394 tgcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 39388813 - 39388636
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||           
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcac-ataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||| | ||||||| ||||||||||| |||| ||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 26026320 - 26026494
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||       ||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||| |||||||||||||||||| ||||||| |||||||| || |||| ||||||    
T  26026420 agttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 48248139 - 48247961
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||| |||||||| || ||||||||||||||||||||||| |||||||||||         
T  48248139 aggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 48248040  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||||||  |||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  48248039 ttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 9181534 - 9181708
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||        |    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-tttttttg 9181632  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 25637741 - 25637568
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||       ||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 25637643  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 24929854 - 24929673
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact----atatgnn 487  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    ||||       
T  24929854 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatttt 24929755  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
         |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||    
T  24929754 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 2758246 - 2758067
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||||||||| |||| |||  |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||        
T  2758246 aaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg-ttt 2758148  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgcta 569  Q
       |||| ||||||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||| |||| |||||||    
T  2758147 tttgcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgcta 2758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 11973945 - 11973772
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||||||||||| |||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||| || |||       ||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatg-gtttttgc 11973847  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||  ||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||    
T  11973846 agttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 5746188 - 5746009
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnn 488  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||| | || ||||||||||||||||||||| ||||| |||||||||||        
T  5746188 aaggcttaattacacttttggtccttgcattttgactaactcacgaaattgat-ctgcctcttttaaatcgaacaaaaccgtccataaactatatgtttt 5746090  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        ||| |||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||    
T  5746089 ttttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 5746009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 393 - 568
Target Start/End: Original strand, 15712366 - 15712541
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||            
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-atttttt 15712464  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    | |||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||    
T  15712465 gtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 391 - 531
Target Start/End: Original strand, 5333879 - 5334018
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||         
T  5333879 aggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 5333977  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaa 531  Q
      |||||||||||||||||  ||||||||| ||||||||||    
T  5333978 ttgcagttttagtcatatccccctatttcctactccagaaa 5334018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 786780 - 786957
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||  ||| |||||||||||        
T  786780 aaggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttt 786879  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
       |||||||||||| ||||| |||||||||||||||| ||||||||| || |||| |||||||| || |||||||||    
T  786880 tttgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 5745642 - 5745815
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||| | | |||||||||||       ||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgtttttt-gc 5745740  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5745741 agttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 787329 - 787152
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg---nnnnnn 491  Q
    ||||||||||||||||| || | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||             
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatt 787230  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
     | |||||||||| ||||||| ||||| |||||||||||||||||||||||||  ||||||||||| |||| ||||||    
T  787229 tgtagttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 16081297 - 16081475
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||||||||||  || |||||||||||| | || |||||||| || ||||||||||||||||||||||| |||||||| ||        
T  16081297 aaggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttg-ttt 16081395  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| |||||||||||||||| |||| |||| ||||||| ||||||||||| |||| ||||||    
T  16081396 tttgcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 545
Target Start/End: Original strand, 28687593 - 28687745
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    ||||||||||||||||||||| |  ||| ||||||||||||||||| |||| ||| || || |||||||||||||||||||| ||||||||||           
T  28687593 ggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat-tttttt 28687691  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
     |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28687692 tgcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgac 28687745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 11971332 - 11971514
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg---n 486  Q
    |||||||||||| ||||||||||||  ||| |||||| |||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        
T  11971332 aaggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 11971431  T
Q  487 nnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
           ||||||||||| ||||| ||||||||||| || |||||| |||||||||||| ||||||||||| |||||||||||    
T  11971432 ttttttacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 14311317 - 14311492
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||| | ||||||| ||||||| || |||||||||  ||||||||  |||||||||||||| ||| ||||||||||||||||||||||            
T  14311317 cttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgttttttta 14311416  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||| || ||||| |||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||    
T  14311417 cagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 34595320 - 34595142
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnn 488  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||       
T  34595320 aaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg--t 34595223  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        |||||||||||  || |  | ||||| |||||||||||||||||| ||||||| ||||||||||| ||||| |||||    
T  34595222 ttttgcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 568
Target Start/End: Complemental strand, 7733043 - 7732857
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||    
T  7733043 ataaaaaaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaacta 7732944  T
Q  482 tatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||       ||| |||||||| ||||| ||||||| |||||||| ||| ||||| |||| ||  || ||||||| |||||||||||    
T  7732943 tatg-ttttttgcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 27245748 - 27245574
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||| |||||||||| |  ||| |||| |||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||       |    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatg-tattttg 27245650  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    || |||||||||||||| |||||||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  27245649 caattttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 5334363 - 5334273
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 566
Target Start/End: Complemental strand, 14311830 - 14311659
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||| ||| |  ||  ||||||||||||| ||| |||||||| || ||||||||||||||||||||||  |||||||||||       ||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt-gc 14311732  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||||||| |||||||||    
T  14311731 agttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 26026861 - 26026688
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||   || ||||| || |||||||| |||||||| || || |||||||||||||| | ||| |||||||||||       ||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgtttttt-gc 26026763  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||  ||||| |||||||||||||||| ||||||| | ||||||| ||||||||||| |||||||||||    
T  26026762 agttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 39136685 - 39136776
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||| |||| ||  |||||| ||||||||||||||||||||||||||||    
T  39136685 aggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactat 39136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 391 - 485
Target Start/End: Original strand, 16917712 - 16917806
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||    
T  16917712 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 16917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 39137088 - 39136991
Alignment:
Q  383 taaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    ||||| ||||||||||||||||||||| |||| | || ||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  39137088 taaaatcaaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 9394274 - 9394184
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||||||||||||||||||| | |||| ||||||| ||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatat 9394184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 392 - 482
Target Start/End: Original strand, 4477702 - 4477792
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||| ||| ||||| ||| |||||||| |||||||| ||||||  |||||||||||| ||| |||||||||||||||||||    
T  4477702 ggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactat 4477792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 45815342 - 45815431
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||||||||||||| ||||||| ||   |||| ||||| | ||||||| ||||||||||||| ||||||||||||||    
T  45815342 aaggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat 45815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 49064032 - 49064124
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||||||||||| | || ||||||| ||||||||| ||||  | ||||||| |||| |||||||||| ||| ||||||||    
T  49064032 aaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactat 49064124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 5184431 - 5184484
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacc 448  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  5184431 ttaattacatttttggtccttggattttgaccaactcacgaaattggtcctacc 5184484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 512 - 568
Target Start/End: Original strand, 26048067 - 26048124
Alignment:
Q  512 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  26048067 cctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 35578902 - 35578979
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtc 472  Q
    |||||||||||||||||| |||||| ||||||| ||||| ||| ||||||| || |||| ||||||||||||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtc 35578979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 26047960 - 26048050
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||| | ||  ||| | ||||||||||||||| ||||| || || |||||||||||| ||||| |||| |||||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatg 26048050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 34594585 - 34594758
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnnnnn 492  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||| |  ||   | |||||| |||| ||||||||| |||||||||||| |||           
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatg--ttttt 34594682  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    |||||||||||| || |  ||||||| |||||| ||||||  ||||||||||  ||||||||||| |||||||||||    
T  34594683 gcagttttagtccta-ccccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 9393738 - 9393825
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||| |||| |||| |||| || ||||||||| | ||| | ||||||| ||||||||||||| ||| ||||||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgt-cctaaactat 9393825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 18535419 - 18535338
Alignment:
Q  401 acacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    |||||||||||||| | || |||||   |||| |||| ||||| ||||||||| ||||||||||||| |||||||||||||||    
T  18535419 acacttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaactata 18535338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 33881030 - 33880969
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtc 554  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||||||||| |||||||||    
T  33881030 gcagttttagtcttatcc-cctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 478
Target Start/End: Original strand, 33880622 - 33880706
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 478  Q
    ||||||| || |||||||||| | || ||||||| ||||| ||| | || || ||||||| ||||||||||||| ||||||||||    
T  33880622 cttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaa 33880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 49064267 - 49064176
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||| ||||||| ||||  ||| ||| |||  |||||||| ||||| |  |||||| ||||||||||||||||||  ||||||||    
T  49064267 aggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 38859187 - 38859133
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | ||| || ||||||||||||||||||    
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 38859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 40669751 - 40669709
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaa 437  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||    
T  40669751 ttaattacacttttgatccttccattttgaccaactcacgaaa 40669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 35579430 - 35579342
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||| |||| |||| |||| || ||||||||| || |  | ||||||| ||||| ||||||| ||| ||||||||||    
T  35579430 gcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgt-cctaaactat 35579342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  497 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    |||||||| ||||| |||||||||||||||| ||| ||||| |||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 35160660 - 35160704
Alignment:
Q  399 ttacacttttggtccttgcatcttgaccaactcacgaaattggtc 443  Q
    ||||||||||||||||  ||| ||||||||||||||||| |||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtc 35160704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 46013420 - 46013598
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||        
T  46013420 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg-ttt 46013518  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  46013519 tttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 51827955 - 51828133
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||        
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatg-ttt 51828053  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       ||| |||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 51828537 - 51828716
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||| |||||||||||        
T  51828537 aaggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttt 51828636  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  51828637 tttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 49720370 - 49720547
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |         
T  49720370 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacg-tttt 49720468  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  49720469 ttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 49952092 - 49951916
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||          
T  49952092 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatg-ttttt 49951994  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  49951993 tgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 392 - 565
Target Start/End: Complemental strand, 43678830 - 43678657
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||          
T  43678830 ggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatg-ttttt 43678732  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
     ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||||    
T  43678731 tgcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 384 - 568
Target Start/End: Complemental strand, 330390 - 330206
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  330390 aaaaaaaaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactata 330291  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||       |||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||| |||| |||||||||||    
T  330290 tg-ttttttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 40275639 - 40275464
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||          
T  40275639 ggcttaattacacttttggtcctcacattttgaccaactcacgaaat-ggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg-ttttt 40275542  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  40275541 tgcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 47431695 - 47431873
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||         
T  47431695 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgttttt 47431794  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  47431795 ttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 384 - 568
Target Start/End: Original strand, 25534882 - 25535067
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgt-ccctaaactat 482  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||    
T  25534882 aaaaaaaaggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat 25534981  T
Q  483 atgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  25534982 atg-ttttttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 380 - 568
Target Start/End: Complemental strand, 51473414 - 51473225
Alignment:
Q  380 acataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaac 479  Q
    |||| ||| ||||| ||||||||||||||| ||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||    
T  51473414 acattaaatcaaggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaac 51473315  T
Q  480 tatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||       |||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  51473314 tatatgtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 52375878 - 52375701
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||         
T  52375878 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatg-tttt 52375780  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||||||||||   |||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  52375779 ttgcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 14654737 - 14654561
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| |         
T  14654737 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgt---tt 14654641  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| || ||| |||||||    
T  14654640 tttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 41998228 - 41998406
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||||||||         
T  41998228 aggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 41998327  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||||| |||||||||||||||| ||||| ||| ||||||| ||||||||||| |||||||||||    
T  41998328 ttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 32730392 - 32730565
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatg-ttttttgc 32730490  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||| || ||||| |||||||||||||| ||||||||||||||||||| |||||||| ||  ||||||||||    
T  32730491 agttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 391 - 570
Target Start/End: Original strand, 55389604 - 55389783
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||| |||||||||||||||||||  ||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||         
T  55389604 aggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 55389702  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctac 570  Q
      |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||    
T  55389703 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctac 55389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 40838655 - 40838825
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||| |||| |||| ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||       ||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg-ttttttgc 40838753  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  40838754 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 398 - 568
Target Start/End: Complemental strand, 34105190 - 34105018
Alignment:
Q  398 attacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnnnnngcag 496  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||        ||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  497 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||  |||| | ||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||    
T  34105090 ttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 43678295 - 43678471
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||  ||||| || || ||||||||||||||||||||||| |||||||||||          
T  43678295 ggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 43678393  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  43678394 tgcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 44676472 - 44676648
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||          
T  44676472 ggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatg-ttttt 44676570  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||| ||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||  |||||||    
T  44676571 tgcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtccagccttctatgct 44676648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 46013968 - 46013792
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||||||||||| ||  ||| ||||||||||| | ||| |||| ||| || ||||||||||||||||||||||| |||||||||||           
T  46013968 gcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 46013869  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  46013868 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 51472853 - 51473029
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||||  |||||||||||||||||| |||||||| ||||||||| ||||||        
T  51472853 aaggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatg-ttt 51472951  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
       |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  51472952 tttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 391 - 566
Target Start/End: Complemental strand, 38535842 - 38535667
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| ||||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||||||| ||||||||||||||||||||||         
T  38535842 aggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatg-tttt 38535744  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
      |||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||    
T  38535743 ttgcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 40275093 - 40275271
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnnn 490  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||          
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgtttttt 40275192  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| | |||||| ||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  40275193 ttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

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Target: chr3; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 52236818 - 52236992
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||| ||||| |||| |||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||       |    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttg 52236916  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||||||||  ||||||| |||||||||||||||||| ||||||| |||||||||||  ||||||||||    
T  52236917 cagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 2044269 - 2044445
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||| |||||||||| || |||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||| ||||||        
T  2044269 aaggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttt 2044368  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
       | |||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||    
T  2044369 ttgg-agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 395 - 556
Target Start/End: Complemental strand, 40839195 - 40839034
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||       ||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 40839097  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
    |||||||||| ||||| |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  40839096 agttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtcca 40839034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 394 - 554
Target Start/End: Complemental strand, 52237361 - 52237201
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||       |    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttg 52237263  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtc 554  Q
    ||||||||||| ||||| |||||||| |||||| |||||||||| ||||||| |||||||||    
T  52237262 cagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtc 52237201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 30513724 - 30513898
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||| |||||||| || |||||||||||| |||||||| | |||||||||||       |    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctg 30513822  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||||||||| | |||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  30513823 cagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 390 - 540
Target Start/End: Complemental strand, 41998776 - 41998628
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||        
T  41998776 aaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttt 41998678  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataa 540  Q
       |||||||||||| || || ||||||| |||||| ||||||| ||||||    
T  41998677 tttgcagttttagtccta-ctccctattttcaactctagaaacgtacataa 41998628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 49951544 - 49951722
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| ||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        
T  49951544 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 49951642  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       ||| |||||||| ||||| |||||||||||||||| |||||||||||||| || ||||||||||| |||| ||||||    
T  49951643 tttgcaattttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 55390144 - 55389967
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||         
T  55390144 aggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatg-tttt 55390046  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      | |||||||||| || || |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  55390045 ttgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 542
Target Start/End: Original strand, 22370599 - 22370746
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||       ||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaat 542  Q
    |||||||||| ||||| | ||| |||||||||||||||||||| ||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaat 22370746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 553
Target Start/End: Original strand, 38535308 - 38535470
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||||||||         
T  38535308 aggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 38535406  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagt 553  Q
      ||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  38535407 ttgcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagt 38535470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 44677020 - 44676842
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| ||||||||||||||||||||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        
T  44677020 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 44676922  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       ||| |||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  44676921 tttgcaattttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 51828504 - 51828327
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||  ||||||||||||||||| ||||| ||  | |||||||||||||||||| |||| |||||||||||          
T  51828504 ggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttt 51828405  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| |||||||||||||||||||||||| | ||||||| ||||||||||| | |||||||||    
T  51828404 tgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 2051294 - 2051475
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg---nn 487  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||| | |||||||||||         
T  2051294 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgttttt 2051393  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
         ||||||||| || ||| | |||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  2051394 tttttgcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 2051475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 50662958 - 50662782
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||| ||||||||||||  ||| ||||| ||||||||||| | ||| || || ||||||||||||||||||||||| |||||||||||          
T  50662958 ggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 50662860  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| || || ||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  50662859 tgcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 52375327 - 52375503
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||  ||| || ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||          
T  52375327 ggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatg-ttttt 52375425  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||  ||||| |||||||| ||||||||||||||| | ||||||| ||||||||| | |||| ||||||    
T  52375426 tgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 395 - 531
Target Start/End: Original strand, 16689361 - 16689496
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||       ||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg-ttttttgc 16689459  T
Q  495 agttttagtcatatcttcctatttccaactccagaaa 531  Q
    |||||||||| ||||  ||||||||| ||||||||||    
T  16689460 agttttagtcctatcaccctatttccgactccagaaa 16689496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 32730933 - 32730759
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||||||| |  ||| || ||||||||| |||| |||||||| || |||||||| |||||||||||||| |||||||||||       |    
T  32730933 cttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatg-ttttttg 32730835  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||| || ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  32730834 cagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 39010073 - 39010250
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||||||| || | |||||| ||||        
T  39010073 aaggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatg-ttt 39010171  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
       ||||||||||||| |||| ||||||| |||||||| ||| ||||||||||||  ||||||||||| |||| ||||||    
T  39010172 tttgcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 390 - 531
Target Start/End: Complemental strand, 49720909 - 49720769
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||   || ||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        
T  49720909 aaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 49720811  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaa 531  Q
       |||||||||||| ||||| ||||||||||||||||||||    
T  49720810 tttgcagttttagtcttatctccctatttccaactccagaaa 49720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 51829086 - 51828910
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    ||||||||||||||||||||| |   || |||| |||||||||||| ||||| || || |||||| || ||||||||||||| |||||||||||          
T  51829086 ggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttttt 51828987  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| ||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||    
T  51828986 -gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 34104636 - 34104813
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||| ||||||||||| || ||  ||| ||||||||||||||||| |||| ||| || |||||||| |||||||||||||  |||||||||||        
T  34104636 aaggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgtttt 34104735  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||||||||| |||||||||| ||||||||||||||| |||||||  |||||||||| |||||||||||    
T  34104736 tt-gcagttttagtcatatct-cctatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 390 - 535
Target Start/End: Complemental strand, 16701340 - 16701193
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nn 487  Q
    |||||||||||||| ||||||||||  ||| ||||||||||||||||| ||||| || || |||||| |||||||||||||||| |||||||||||        
T  16701340 aaggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttt 16701241  T
Q  488 nnnnngcagttttagtcatatcttcctatttccaactccagaaacgca 535  Q
         |||||||||||||||||| |||||||||||||||| |||||||    
T  16701240 tttttgcagttttagtcatatctccctatttccaactccataaacgca 16701193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 396 - 527
Target Start/End: Original strand, 329850 - 329980
Alignment:
Q  396 taattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngca 495  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||       |||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgca 329948  T
Q  496 gttttagtcatatcttcctatttccaactcca 527  Q
    ||||||||| ||||| ||| ||||||||||||    
T  329949 gttttagtcctatctccctgtttccaactcca 329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 36701096 - 36701196
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    |||| |||||||||||||||||||||||||||| |||| |||| |||||||||||| || || | ||||||| ||||||||||||||||||| |||||||    
T  36701096 ataataacaaggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaacta 36701195  T
Q  482 t 482  Q
    |    
T  36701196 t 36701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 384 - 562
Target Start/End: Complemental strand, 43222944 - 43222765
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| || ||||||| |||||||||||||| |||| ||||| | | ||||||| ||||| | |||||||||||||||||||||||||||||||||| ||    
T  43222944 aaaaaaaaagcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaacttta 43222845  T
Q  484 tgnnnnnnngcagttttagtcatatcttccta-tttccaactccagaaacgcacataaatgac-gttttagtccagccacc 562  Q
    ||       ||||||||||||  | |  |||| ||| |||||||||||||||||| ||||||| ||||||||||| |||||    
T  43222844 tgtttttttgcagttttagtccca-ccccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 391 - 545
Target Start/End: Complemental strand, 27200238 - 27200086
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| |||| || ||||||| ||||||||||| | ||| ||||||||||            
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgt-cctaaactatcatgtttt 27200140  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
      ||||||||||||||| | |||||||| |||||||||||||||| | |||||||    
T  27200139 ttgcagttttagtcata-cctcctattttcaactccagaaacgcagagaaatgac 27200086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 391 - 545
Target Start/End: Original strand, 49407795 - 49407947
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||| | ||||||| |||| |||||||| |||||||||||| ||||         
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttg 49407894  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
       |||||||||||||| | |||||||| |||||||| ||||||| | |||||||    
T  49407895 ta-cagttttagtcata-cctcctattttcaactccaaaaacgcagagaaatgac 49407947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 391 - 485
Target Start/End: Original strand, 14654198 - 14654292
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||| | ||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||  |||||||||||    
T  14654198 aggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 542
Target Start/End: Original strand, 27199705 - 27199851
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| |||||||||| |||| ||||||| ||||||||| ||||| | ||||||| ||||||||||||| |||| ||||||||||||       ||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttttttgc 27199804  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaat 542  Q
    |||||||||  || | |||||||| |||||| ||||||||| ||||||    
T  27199805 agttttagtgcta-catcctattttcaactctagaaacgcagataaat 27199851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 50901074 - 50900980
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||||||||||||||| |||| ||||||| ||||| ||| ||| ||| ||||||  ||||||||||||| |||||||||||||||||    
T  50901074 aggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatg 50900980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 394 - 532
Target Start/End: Complemental strand, 36701640 - 36701503
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||| ||||| |  |||||| ||||||||||||||| ||||||||||||          |    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaac 532  Q
    |||||||||||||| | |||||||| |||||||||||||    
T  36701540 cagttttagtcata-cctcctattttcaactccagaaac 36701503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 483
Target Start/End: Complemental strand, 33412701 - 33412609
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||| |||| ||  ||||||  ||||||||||||||||||||||||||||    
T  33412701 aggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 37075687 - 37075779
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||||   |||| ||||||||||||||||| ||||||| ||||||| ||||| ||||||  |||||||||||||||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatg 37075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 37076219 - 37076131
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||| |||||||||| |||| |||| || ||||||||| ||||||  ||||||| ||||||||||||||||| ||||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgt-cctaaactat 37076131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 485
Target Start/End: Original strand, 43222390 - 43222483
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||  |||||||| |  ||| ||||||||||||||||| | ||  |  ||||||||||||||||||||||||||||||||||||||    
T  43222390 ggcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg 43222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 392 - 545
Target Start/End: Original strand, 55192118 - 55192269
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    ||||||||||||||||| ||||  |||| ||||||| ||||||||| |||||   ||||||| ||||| ||||||| ||||| |||||||||||          
T  55192118 ggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatg-ttttt 55192216  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
     | |||||||||| || | |||||||| |||||||||||||||| | |||||||    
T  55192217 tgtagttttagtccta-cctcctattttcaactccagaaacgcagagaaatgac 55192269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 8874229 - 8874139
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||  |||  || | ||||||| ||||||||| ||||||| | ||||||||||||||||||| | |||||||||||||||    
T  8874229 ttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatg 8874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 12141237 - 12141147
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||| |||| |||| || | ||  ||||| || ||||||||||||||| ||||||||||||| | || |||||||||    
T  12141237 ggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactat 12141147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 23644455 - 23644515
Alignment:
Q  385 aaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||| ||||||||||||||||||||||||| | || ||| || ||||||||||||||||||    
T  23644455 aaaaaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcct 23644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 30104481 - 30104535
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | |||||| ||||||||||||||||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcct 30104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 49408326 - 49408252
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||||||||||| || |||| ||||||| ||||||||| ||||  |  |||||| |||||||||||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaa 49408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 20840559 - 20840635
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    |||||||||||||||||||||||| |  | ||| || |||||||||| ||||||| ||| ||| |||| ||||||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaa 20840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 25612519 - 25612447
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    |||||||||||||||||||| |  | |||||| |||||||||||||||||| ||  ||| |||| ||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaa 25612447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 473
Target Start/End: Complemental strand, 39010538 - 39010486
Alignment:
Q  421 ttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 473  Q
    ||||||| ||||||||| || ||||| || |||||||||||||||||||||||    
T  39010538 ttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtcc 39010486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 50900534 - 50900621
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||| |||||||||| |   || |||| || ||||||||| |||||||| |||||| ||||||||||||| ||| ||||||||||    
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgt-cctaaactat 50900621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 24301102 - 24301048
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| |  | ||| || ||||||||||||||||||    
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 24301048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 26837363 - 26837413
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||| |||||||||||| || ||| || ||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcct 26837413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 23645010 - 23644946
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaa 457  Q
    |||||||||| |||||||||||| |  | ||| || ||||||||||||||||||||| ||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacc-cttttaaa 23644946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 27394124 - 27394047
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||||||||||||||||| |  | ||| || ||||||||||| |||||| ||| ||| |||  ||||||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaa 27394047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 43222517 - 43222566
Alignment:
Q  520 caactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||| ||| ||||||| ||||||||||| |||||||||||    
T  43222517 caactccagaaacgtacaaaaatgacagttttagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 5136983 - 5137031
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtc 443  Q
    |||||||||||||||||||| |  | ||| |||||||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtc 5137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 562
Target Start/End: Original strand, 14654309 - 14654361
Alignment:
Q  511 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacc 562  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||| |||||    
T  14654309 tcctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 30098317 - 30098257
Alignment:
Q  383 taaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtc 443  Q
    |||||| ||||||||||||||||||||||||| |  | |||||  |||||||||| |||||    
T  30098317 taaaaataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtc 30098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 10278550 - 10278725
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 10278649  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  10278650 cagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 1837504 - 1837681
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||         
T  1837504 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatg-tttt 1837602  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  1837603 ttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 30786769 - 30786948
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaa-ttggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnn 488  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       
T  30786769 aaggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tt 30786867  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||| ||||||    
T  30786868 ttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 52336058 - 52335880
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||| |||||||| ||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||         
T  52336058 aaggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-tttt 52335960  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  52335959 tttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 390 - 566
Target Start/End: Original strand, 4080019 - 4080195
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||        
T  4080019 aaggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttt 4080118  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
        ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||| |||||    
T  4080119 tta-cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 393 - 568
Target Start/End: Original strand, 16298683 - 16298858
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttt 16298781  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| ||||||||||||||  |||||||| ||||||||  ||||||||||| |||||||||||    
T  16298782 gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 29438928 - 29439107
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        
T  29438928 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttt 29439027  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| |||||  |||||| ||| || | |||| |||| |||| || ||||||||||| |||||||||||    
T  29439028 tttgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 37421163 - 37421338
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnnnnng 493  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttg 37421262  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||||||| | |||||||||||||||| ||||||||| ||||||| ||||||||| | |||||||||||    
T  37421263 cagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 34555926 - 34555750
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnnnnn 492  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||            
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 34555827  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 34555378 - 34555557
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnn 489  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||         
T  34555378 aggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 34555477  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
        ||||||||||| ||||| |||||||||||||||||||||||||| ||||||  |||||||| || |||| ||||||    
T  34555478 tttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgct 34555557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 392 - 566
Target Start/End: Complemental strand, 2868254 - 2868080
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||| ||||  ||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||          
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatg-ttttt 2868156  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
     |||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||    
T  2868155 tgcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 568
Target Start/End: Complemental strand, 17641925 - 17641734
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    ||||||| |||  |||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  17641925 ataaaaaaaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaacta 17641826  T
Q  482 ----tatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
        |||        |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||    
T  17641825 tttttatttttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 444097 - 443921
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||| ||||||| || |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||          
T  444097 ggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatg-ttttt 443999  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| ||||||||||| |||| |||||| |||||||||| ||||||||||| |||||||||||    
T  443998 tgcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 44582059 - 44582233
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||       |    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatg-ttttttg 44582157  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| |||||   | |||||||||||| |||||||||||||||||  |||||||||| |||||||||||    
T  44582158 cagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 395 - 566
Target Start/End: Complemental strand, 8230184 - 8230013
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| ||||||| || |||| |||||| | |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||       ||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 8230086  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  8230085 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 23340183 - 23340359
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||           
T  23340183 ggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat-attttt 23340281  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||||||||| | ||||||||||||||||||||| || ||||||| |||||||| || |||| ||||||    
T  23340282 tgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 44954771 - 44954596
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn 492  Q
    |||||||||||||||||||||| |||| |||||||||||| |||| || || ||||| ||||||||| ||||||||| ||| |||||||||||           
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatg-tttttt 44954673  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 384 - 568
Target Start/End: Original strand, 37505059 - 37505244
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    |||| ||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| ||| || ||||||||||||||||||||||| |||||||||    
T  37505059 aaaagcaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactata 37505158  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||       |||||||||||| ||| | ||||||| |||||||| ||| | ||| ||||||| ||||||||||||| | |||||||    
T  37505159 tgtttttttgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtccagctatctatgct 37505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 391 - 568
Target Start/End: Original strand, 9992153 - 9992331
Alignment:
Q  391 aggcttaattacacttttggtccttgcatctt-gaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    ||||||||||||||||||||||||  ||| || |||||||||||| || |||||||| || |||||||||||||||||| |||| |||||||||||        
T  9992153 aggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatg-ttt 9992251  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||  |||||||||||    
T  9992252 tttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 21938561 - 21938739
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| |||||||||||||||||| |  ||| |||| |||||||||||| || || || || ||||||||||||||||||||||| |||||||||||        
T  21938561 aaggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgtttt 21938660  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  21938661 tt-gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 37505613 - 37505438
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||| | |||||||||||  || |||||||||||||||||||| || || |||||||||| | ||||||||||||| |||||||||||          
T  37505613 ggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatg--tttt 37505516  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  37505515 tgcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 394 - 565
Target Start/End: Original strand, 1744330 - 1744500
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    ||||||||||||||||||| | | || ||||| |||||||| || || |||||||| |||  | || || |||||||||||||||||||||        |    
T  1744330 cttaattacacttttggtcttcgtattttgacaaactcacgtaaatgatcctaccttttt--agtcaaataaaatcgtccctaaactatatatttttttg 1744427  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1744428 cagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 9992701 - 9992525
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| || ||||||||||||||||||||| | |||||||||||          
T  9992701 ggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatg-ttttt 9992603  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     ||||| |||||| ||||| ||||||| |||||||||||||||  | ||||||| |||||| |||| ||| |||||||    
T  9992602 tgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 394 - 485
Target Start/End: Original strand, 50304441 - 50304532
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 392 - 566
Target Start/End: Complemental strand, 10279093 - 10278922
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||| ||||  | | ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  10279093 ggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-- 10278996  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
      ||||||||||| ||||| | ||| ||||||||||||||| |||| ||||||| ||||||||||| |||| ||||    
T  10278995 --cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 556
Target Start/End: Original strand, 8229636 - 8229804
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nnn 488  Q
    ||||||||||||||||||| ||||  ||| |||| |||||||||||| || | |||| |||||||||||||| ||||||||| ||||||||||||         
T  8229636 aggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgttttt 8229735  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
        |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  8229736 ttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtcca 8229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 532
Target Start/End: Original strand, 39485068 - 39485203
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||||||||| |||| ||||| | ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||       ||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 39485166  T
Q  495 agttttagtcatatcttcctatttccaactccagaaac 532  Q
    |||||||||| |||| |||||||| ||||| |||||||    
T  39485167 agttttagtcctatc-tcctattttcaacttcagaaac 39485203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 45048158 - 45048248
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||| |||||||||||||| |||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg 45048248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 394 - 556
Target Start/End: Original strand, 2867913 - 2868075
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||| |||||||| | |||| ||||||||||||||||| || || || ||||||||||||||||||||| |||  |||||||||||       |    
T  2867913 cttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg-ttttttg 2868011  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
    ||||||||||||||| | ||||| || ||||||| ||||||||||||||||| |||||||||||    
T  2868012 cagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtcca 2868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 29021412 - 29021234
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnn 489  Q
    |||||||||| |||||||||||||  ||| ||||||| ||||||||| || || | ||||||| |||||||||||||||||||||||| ||| | |        
T  29021412 aggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttt 29021313  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||| || |  ||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  29021312 tttgcagttttagtctta-ccccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 44954229 - 44954402
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    ||||||||| |||| ||||   ||| ||||||||||||||||| ||||| ||||| ||||||||| ||||||||||||  |||| ||||||       ||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgtttttt-gc 44954327  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||| |||||  || |||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  44954328 agttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 395 - 545
Target Start/End: Complemental strand, 50305328 - 50305176
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaac--tatatgnnnnnnn 492  Q
    ||||||||||||||||| ||  ||| || ||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||  |||||            
T  50305328 ttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttttt 50305229  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    |||||||||||||||||| ||||||| |||||||| |||| ||||||||||||    
T  50305228 gcagttttagtcatatctccctattttcaactccataaacacacataaatgac 50305176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 44802718 - 44802627
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| | ||||||| |||  |||||||||||||||||||||||    
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactat 44802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 50926232 - 50926408
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnnnnn 492  Q
    |||||||||| ||||||||||  ||| ||||||| ||||||||| |  || ||||||||| |||||||||||||||||||||||||||| ||            
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcattttttttt 50926331  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaat-gacgttttagtccagccacctatgct 568  Q
    |||||||||||| |  | |||||||| ||||||||||||| ||||||||| |  ||||||||||| |||||||||||    
T  50926332 gcagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 44582603 - 44582427
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng 493  Q
    |||||||||||||||||| ||  ||| |||| |||||||||||| ||||| || |  ||| ||||||||||||||||||  |||||||||||       |    
T  44582603 cttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttg 44582504  T
Q  494 cagttttagtcatatcttcctatttccaactcc-agaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| | ||| ||||||| || |||| | ||||||||| ||||||| ||||||||||| |||||||||||    
T  44582503 cagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 482
Target Start/End: Original strand, 23526650 - 23526748
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||| || ||||| ||||||||||||||||  ||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||    
T  23526650 aaaaaaaaagcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactat 23526748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 16299228 - 16299055
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||| |||||| |||||  ||| |||| |||||| ||||| ||||||||  | |||||| | |||||||||||||| |||||||||||         
T  16299228 aggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgttttt 16299130  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 565  Q
      |||||||||||| ||||| | |||||||||||||||||||||||| |||||||  ||||||| || ||||||||    
T  16299129 t-gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 430 - 566
Target Start/End: Original strand, 17641403 - 17641539
Alignment:
Q  430 tcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccaga 529  Q
    |||||||| ||||| ||||| |||||||||||||||||| || | ||||||||| |       | |||||||||  ||||| ||||||||||||||||||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgtttttt-gtagttttagttctatctccctatttccaactccaga 17641501  T
Q  530 aacgcacataaatgac-gttttagtccagccacctatg 566  Q
    |||||||||||||||| |||||||| || |||||||||    
T  17641502 aacgcacataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 50926788 - 50926697
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||||| | |||| ||||||| ||||||||| ||||||   |||||| ||||||||||||| ||||||||||||||    
T  50926788 aggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactat 50926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 6224700 - 6224875
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnng- 493  Q
    ||||||||| ||||| ||||  ||| ||||||||||||  ||| |||| ||   | ||||||||||||||||||||||| |||| |||||              
T  6224700 ttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatatttttta 6224799  T
Q  494 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 391 - 484
Target Start/End: Complemental strand, 17088686 - 17088593
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||||| ||||| | ||||||| ||||| ||||||| ||||||||||||||||    
T  17088686 aggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatat 17088593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 37421488 - 37421397
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctctttt-aaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||||||||||| ||| |  ||| ||||||||||||||||| |||||||| || |||| ||||||||||||||||||| |||||||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 29439465 - 29439375
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||||| ||||||||||||   ||| |||| |||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||    
T  29439465 ttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 29439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 30787345 - 30787251
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||| ||||  ||| | || |||||||||||| ||||| || || ||| ||||||||||||||||||| |||||||||||    
T  30787345 aggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatg 30787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 25274760 - 25274845
Alignment:
Q  396 taattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||| ||||| | ||||||| ||||||||||||| ||| |||||||||    
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta 25274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 568
Target Start/End: Complemental strand, 9833698 - 9833522
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||  ||||||| |||||| |  ||||||||||||||||| | ||| | ||||||| |||||||||||||||||||||||| |||             
T  9833698 ggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttt 9833599  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| || |  ||||||| |||||||||||||||||| |||| ||  |||||||||  |||||||||||    
T  9833598 tgcagttttagtccta-ccccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 390 - 465
Target Start/End: Complemental strand, 39843572 - 39843497
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaa 465  Q
    ||||||| |||||||||| |||||| |||| | ||||||||||||||||||||||| ||| ||| |||||||||||    
T  39843572 aaggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 45048678 - 45048592
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||| |||| |||||||  |||||||| ||||| |||||||||  |||||||||||| ||| ||||||||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgt-cctaaactat 45048592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 17088144 - 17088235
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||| |||||| | |||| ||||||| ||||||||| ||||  | ||||||| ||||||||||||| ||| ||||||||||    
T  17088144 aaggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgt-cctaaactat 17088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 36228783 - 36228883
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 481  Q
    ||||||||||||||||||| |||||||| ||||  ||| || | || ||||| ||| ||||| |||||||||||||| ||||||||   |||||||||||    
T  36228783 ataaaaacaaggcttaattgcacttttgatcctcacattttaatcagctcacaaaaatggtcttacctcttttaaattgaacaaaacgatccctaaacta 36228882  T
Q  482 t 482  Q
    |    
T  36228883 t 36228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 44291303 - 44291391
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||| |||||||||||||  ||| ||||||| ||||||||| ||||  | ||||||| |||| |||||||||||||| ||||||||    
T  44291303 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactat 44291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 467
Target Start/End: Complemental strand, 50419806 - 50419731
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||| ||||||||||| | |||| | ||||||||||||||||||||||| ||| ||| |||| ||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaa 50419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 18984666 - 18984611
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||||||  | ||| || ||||||||||||||||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 18984611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 554
Target Start/End: Original strand, 48173746 - 48173911
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnn 488  Q
    |||||||||||  || ||||||||  |||| |||||||  |||| ||| |||| || ||||||| |||||||||||||||| ||||||| ||| |||       
T  48173746 aaggcttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaattatcatgttt 48173845  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtc 554  Q
        ||| ||||||||||| |  ||||||| |||||||| |||| | |||||||||| |||||||||    
T  48173846 ttttgcacttttagtcata-ccccctattttcaactccaaaaactctcataaatgacagttttagtc 48173911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 23527074 - 23526986
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||| ||||||| ||||  ||| |||| || |||| |||| ||||| | ||| ||||||||||||||||| |||| |||||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactat 23526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 50304882 - 50304958
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||||||| |||||||| ||||||| |||| |||| ||||| |  ||||| |||| |||||||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 52268288 - 52268343
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||||||||||||||||||| | || ||| ||  |||||||||||||||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcct 52268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 472
Target Start/End: Complemental strand, 44291859 - 44291777
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtc 472  Q
    |||| |||||| || |||| ||||||| || ||||||| |||| |||| ||||| |  ||||||||||||||| |||||||||    
T  44291859 aaggtttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 50970277 - 50970353
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaa 467  Q
    |||||||||||||||||||||||| |  | ||| || |||||||||| |||||||  |||||||||||| ||||||||    
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gctcttttaaatcagaacaaaa 50970353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 5539817 - 5539869
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||| |  | ||| || ||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 5539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 9e-56; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 386 - 568
Target Start/End: Complemental strand, 18150276 - 18150093
Alignment:
Q  386 aaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    |||| |||||||||||||||| || |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18150276 aaactaggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatg 18150177  T
Q  486 nnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
           |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  18150176 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 389 - 566
Target Start/End: Original strand, 28289681 - 28289858
Alignment:
Q  389 caaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnn 488  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||       
T  28289681 caaggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgttt 28289780  T
Q  489 nnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 566  Q
         ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  28289781 tttc-cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 21371243 - 21371066
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||         
T  21371243 aggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatg-tttt 21371145  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| || |||||||||||    
T  21371144 ttgcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 32697771 - 32697593
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--nnnnn 490  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||           
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatt 32697672  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      ||||||||||| ||| || ||||||||||||||||||||| |||| |||||||   ||||||||| |||||||||||    
T  32697671 ttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 15029856 - 15029679
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||         
T  15029856 aggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 15029758  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||   |||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15029757 ttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 28290191 - 28290014
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||| |  ||||||||||||||||||||||| |||||||||||         
T  28290191 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatg-tttt 28290093  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  28290092 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 568
Target Start/End: Original strand, 38900648 - 38900818
Alignment:
Q  396 taattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngca 495  Q
    ||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||       |||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttgca 38900746  T
Q  496 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgct 568  Q
    ||||||||| ||||| |||||||||||||||| ||||| |||||||||||   |||||||| |||||||||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacgtacataaatgac-agttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 15115639 - 15115465
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||          
T  15115639 aggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat----tt 15115544  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      |||||||||||||||||  |||||||||||||| | ||||||||||||||||| |||||||| || |||| ||||||    
T  15115543 ttgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 4967318 - 4967139
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-nnnn 489  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||         
T  4967318 aggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 4967219  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga-cgttttagtccagccacctatgct 568  Q
       |||||||||||| ||| | |||||||| ||||| ||||||||||||||||||  ||||||||||| |||| ||||||    
T  4967218 tttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 19291356 - 19291533
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||   || |||| |||||||| ||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  19291356 ggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 19291455  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||| | |||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  19291456 tgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 4966819 - 4966991
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngc 494  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | || || |||||||||||||||||||||||||||||||||||||||       ||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttagc 4966917  T
Q  495 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||||||  |||||||||||||| ||||| ||||| ||||||| ||||| | ||| |||||||||||    
T  4966918 agttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 384 - 545
Target Start/End: Complemental strand, 8419174 - 8419015
Alignment:
Q  384 aaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactata 483  Q
    ||||| || ||||||||||||||||||||||  ||| ||||||||||||||||  |||||||| || |||||||| |||||||||||||| |||||||||    
T  8419174 aaaaaaaatgcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactata 8419075  T
Q  484 tgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
    |        |||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  8419074 t--ttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgac 8419015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 392 - 556
Target Start/End: Complemental strand, 38901186 - 38901024
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    |||||||||||||||||||||||| ||| ||||| ||  ||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||          
T  38901186 ggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 38901088  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
     ||||||||||| |||||| | |||||||||  ||||||||||||||||||||| |||||||||||    
T  38901087 tgcagttttagttatatctccttatttccaa--ccagaaacgcacataaatgacagttttagtcca 38901024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 395 - 484
Target Start/End: Complemental strand, 14340953 - 14340864
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatat 14340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 391 - 527
Target Start/End: Original strand, 18149732 - 18149867
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||         
T  18149732 aggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 18149830  T
Q  491 nngcagttttagtcatatcttcctatttccaactcca 527  Q
      |||||||||||| ||| | ||||||||||||||||    
T  18149831 ttgcagttttagtcctatttccctatttccaactcca 18149867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 390 - 531
Target Start/End: Complemental strand, 5162117 - 5161976
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||| ||||  ||||||||| |||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||| ||||||        
T  5162117 aaggcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttt 5162018  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaa 531  Q
       ||| |||||||| ||||| || |||| ||||| ||||||    
T  5162017 tttgcaattttagtcctatctcccaatttacaacttcagaaa 5161976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 391 - 544
Target Start/End: Original strand, 16752581 - 16752732
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||| || || | | ||||| ||||||||||||||||||| |||||||||||         
T  16752581 aggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatg-tttt 16752679  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatga 544  Q
      |||||||| |||||| | |||||||| |||||||| ||||||| | ||||||    
T  16752680 ttgcagtttttgtcata-cctcctattttcaactccataaacgcaaagaaatga 16752732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 556
Target Start/End: Original strand, 39083361 - 39083524
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnn- 492  Q
    |||||||||||||| | ||||  ||| ||||||||||||||||| ||||||||  | |||||||||||||||||| || | ||||||||||             
T  39083361 cttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatatttttt 39083459  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 556  Q
    |||||||||||||||||| | ||||||||||||||||||| |||| ||||||| |||||||||||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtcca 39083524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 41834607 - 41834516
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||| ||||||| | ||||||||||| ||| ||||||||||    
T  41834607 aaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgt-cctaaactat 41834516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 17260767 - 17260676
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||| ||||||||||||| |||| |||||||| |||||||| || | |||||||||| ||||||||||||| | ||||||||||||    
T  17260767 aggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactat 17260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 22651858 - 22651767
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||| ||||| |||| ||||||| ||||||||| |||| || ||| ||| ||||||||||||||||||| ||||||||    
T  22651858 aggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 430 - 568
Target Start/End: Original strand, 5161620 - 5161759
Alignment:
Q  430 tcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccaga 529  Q
    |||||||| | ||| || || |||||||||||||||||| |||  |||| ||||||       |||||||||||| ||||||||||||||||||| || |    
T  5161620 tcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatcttcctatttccaacttcaaa 5161719  T
Q  530 aacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||| | ||||||| |||||||| || |||||||||||    
T  5161720 aacgcatagaaatgacagttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 22651347 - 22651521
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgnnnnnnn 492  Q
    |||||||||| ||||||| || | || ||||||| |||||| || ||||| | ||||||||||||| ||||||| | ||| |||||||| |||           
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgttttt-- 22651444  T
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| || || | ||||| |||||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  22651445 gcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtc 472  Q
    ||||||||| ||||||||||  ||| |||| |||||||||||| |||||||| || ||||||||||||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 405 - 482
Target Start/End: Original strand, 32305831 - 32305908
Alignment:
Q  405 ttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||| | |||| |||| || ||||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactat 32305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 27307605 - 27307513
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||| |||||||||||  |||| |||||||  |||||||| |||| || ||||||| ||||||||||||| ||||| |||||||||||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatg 27307513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 20266458 - 20266371
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||| ||||||||||||| | || ||||||| || |||||| ||||| |  |||||| ||||||||||||||||||||||||||||    
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 10721787 - 10721875
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||| ||||||||||  ||| ||||||| ||||||||| ||||| |  |||||| ||||||||||||||||| ||||||||||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgt-cctaaactat 10721875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 28494845 - 28494919
Alignment:
Q  393 gcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaa 467  Q
    ||||||||||||||||||||||| ||| |||||||  ||| |||| |||| || ||||||| |||||||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaa 28494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 463
Target Start/End: Complemental strand, 16753114 - 16753045
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaac 463  Q
    |||||||||| |||||||| | |||| ||||||||||||||||| |||| || ||||||| |||||||||    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaac 16753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 28495378 - 28495294
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct 475  Q
    ||||||||||||||||||||||     || ||||||| ||||||||| ||||| | ||||||| |||||||||||||| ||||||    
T  28495378 aggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtccct 28495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 28595182 - 28595270
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||| ||||||||||||| | || ||||||| || || ||| ||||| | | ||||| ||| ||||||||||||||||||||||||    
T  28595182 cttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactat 28595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 545
Target Start/End: Original strand, 27307059 - 27307212
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||||||||||||||||||||| || |||| |||||||||| | |||| ||||| |   ||||| |||| |||||||||| | ||||||||||           
T  27307059 aaggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcat-cctaaactatcatgttt 27307157  T
Q  490 nnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 545  Q
       |||||||||||| || | |||||||| |||||||||||||||| | |||||||    
T  27307158 tttgcagttttagtctta-cctcctattttcaactccagaaacgcatagaaatgac 27307212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 473
Target Start/End: Original strand, 4623148 - 4623229
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 473  Q
    ||||||||||||||||||||| | |  | |||||  |||||||||||||||||| ||||||| |||  ||||||||| ||||    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtcc 4623229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 482
Target Start/End: Original strand, 21370675 - 21370776
Alignment:
Q  381 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 480  Q
    ||||||| ||||| ||||||| | |||| |||||   || |||||||||| |||||| ||||  || || ||||||||||||||||||||||  ||||||    
T  21370675 cataaaatcaaggtttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaact 21370774  T
Q  481 at 482  Q
    ||    
T  21370775 at 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 164181 - 164244
Alignment:
Q  382 ataaaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    ||||||||  ||||||||||||||||||||||| |  | |||||| |||||||||| |||||||    
T  164181 ataaaaacttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcct 164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 472
Target Start/End: Original strand, 13556995 - 13557072
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtc 472  Q
    ||||||||||||||| |   ||| |||| ||||||| ||||||||| ||||| | ||||||| ||||| ||||||||||||    
T  13556995 ggcttaattacacttat---cctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtc 13557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 535
Target Start/End: Original strand, 21370798 - 21370836
Alignment:
Q  497 ttttagtcatatcttcctatttccaactccagaaacgca 535  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgca 21370836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 24362382 - 24362328
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcct 445  Q
    |||||||||||||||||||||||| | || ||| || |||||||||| |||||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcct 24362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 484
Target Start/End: Original strand, 21769597 - 21769634
Alignment:
Q  447 cctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  21769597 cctctttcaaatcgaacaaaaccgtccctaaactatat 21769634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 568
Target Start/End: Complemental strand, 22651760 - 22651715
Alignment:
Q  524 tccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 385 - 568
Target Start/End: Original strand, 46259 - 46443
Alignment:
Q  385 aaaacaaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 484  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  46259 aaaaaaaggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatat 46358  T
Q  485 gnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |       |||||||||||||||||| ||||||||||| |||| ||| ||||| ||||||| ||||||||||| |||||||||||    
T  46359 gtttttttgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 46815 - 46637
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnn 490  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||  | ||||||||||||||||||||||  |||||||||||         
T  46815 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgttttt 46716  T
Q  491 nngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
      | |||||||||  ||||  |||||||||||||||| |||||||||||||||||  |||| ||||| |||||||||||    
T  46715 ttgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 6944 - 6761
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| |||||||| |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||        
T  6944 aaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttt 6845  T
Q  490 nnngcagttttagt----catatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||    | ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  6844 tttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 6392 - 6568
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    ||||||||| |||||||||||||  ||| |||| ||||||| |||| |||| ||| || ||||||||||||||||||||||| |||| ||||||          
T  6392 ggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg-ttttt 6490  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| |||| |||| ||||||    
T  6491 tgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 6962 - 6779
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnn 489  Q
    |||| |||||||| |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||        
T  6962 aaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttt 6863  T
Q  490 nnngcagttttagt----catatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
       |||||||||||    | ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  6862 tttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 568
Target Start/End: Original strand, 6410 - 6586
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgnnnnnn 491  Q
    ||||||||| |||||||||||||  ||| |||| ||||||| |||| |||| ||| || ||||||||||||||||||||||| |||| ||||||          
T  6410 ggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg-ttttt 6508  T
Q  492 ngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
     |||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| |||| |||| ||||||    
T  6509 tgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 6e-26; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 210885 - 210793
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||||||||  ||| |||||||||||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  210885 aaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 205911 - 205823
Alignment:
Q  394 cttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 205823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 204931 - 205018
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||||||||||||| || ||||||| |||||||   ||||||| ||||||| ||||| |||||||| |||||||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactat 205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 205361 - 205448
Alignment:
Q  395 ttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||||||| |||||| || ||||||| |||||||   ||||||| ||||||| |||||||||||| | |||||||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactat 205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 612 - 518
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 485  Q
    ||||||||||||||||||| |||| |||| ||||| | ||||||||| ||||| | ||||||| |||||||||||||  ||| ||||||||||||    
T  612 aggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatg 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 15644 - 15554
Alignment:
Q  392 ggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||| | ||||||| || |||| |||| || ||||||||| |||||||  |||||| |||||||||||||  |||||||||||||    
T  15644 ggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactat 15554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 15111 - 15203
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    |||||||||||| |||||||||| | |||| ||||||| ||| ||||| || | || ||||||| ||||||||||||| |  |||||||||||    
T  15111 aaggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactat 15203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 78417 - 78493
Alignment:
Q  493 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 568  Q
    |||||||||||| |||||  ||||||||||||||||||| ||| | |||||||  |||||||||| |||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 159019 - 159099
Alignment:
Q  391 aggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtc 472  Q
    |||||||||| || ||||| |||| |||| || |||| ||||||||| || |||| ||||||| ||||||||||||| ||||    
T  159019 aggcttaattgca-ttttgatcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtc 159099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 159429 - 159337
Alignment:
Q  390 aaggcttaattacacttttggtccttgcatcttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 482  Q
    ||||||||||| ||| |||  ||||| ||| || |||  ||||||||| ||||| |  |||||| ||||||||||||||||| | ||||||||    
T  159429 aaggcttaattgcacatttaatccttccatttttaccggctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactat 159337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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