View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11658_low_7 (Length: 524)

Name: NF11658_low_7
Description: NF11658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11658_low_7
NF11658_low_7
[»] chr6 (36 HSPs)
chr6 (272-433)||(12097509-12097670)
chr6 (18-131)||(12097668-12097781)
chr6 (147-266)||(6919710-6919828)
chr6 (125-270)||(9285645-9285790)
chr6 (147-270)||(776078-776201)
chr6 (147-268)||(9763050-9763171)
chr6 (147-230)||(9285685-9285768)
chr6 (432-506)||(12097409-12097483)
chr6 (147-268)||(6919746-6919866)
chr6 (193-270)||(29889432-29889509)
chr6 (193-270)||(34244978-34245055)
chr6 (194-272)||(15299510-15299587)
chr6 (194-268)||(28918165-28918239)
chr6 (147-268)||(776118-776239)
chr6 (193-266)||(9763014-9763087)
chr6 (194-272)||(13487271-13487349)
chr6 (125-192)||(1195349-1195416)
chr6 (204-270)||(8574693-8574759)
chr6 (193-270)||(1368475-1368552)
chr6 (125-193)||(8475177-8475245)
chr6 (204-268)||(8574760-8574824)
chr6 (196-255)||(15299412-15299471)
chr6 (125-161)||(6919832-6919868)
chr6 (18-96)||(11796261-11796339)
chr6 (127-162)||(33733432-33733467)
chr6 (125-162)||(28918163-28918200)
chr6 (193-241)||(34364770-34364818)
chr6 (127-162)||(13487275-13487310)
chr6 (228-271)||(33733429-33733472)
chr6 (127-162)||(34245018-34245053)
chr6 (194-248)||(15832486-15832540)
chr6 (193-230)||(1195371-1195408)
chr6 (193-246)||(6358249-6358302)
chr6 (125-162)||(8574789-8574826)
chr6 (440-504)||(7132543-7132607)
chr6 (440-504)||(7135466-7135530)
[»] chr2 (80 HSPs)
chr2 (127-268)||(14537199-14537340)
chr2 (147-268)||(784793-784914)
chr2 (129-230)||(11824718-11824819)
chr2 (174-270)||(11716406-11716502)
chr2 (147-268)||(14365700-14365820)
chr2 (129-230)||(3345765-3345867)
chr2 (147-268)||(14954266-14954388)
chr2 (147-266)||(41461517-41461636)
chr2 (147-270)||(14365738-14365860)
chr2 (147-230)||(10244215-10244298)
chr2 (125-270)||(10244175-10244320)
chr2 (123-264)||(11684603-11684735)
chr2 (193-274)||(27033484-27033565)
chr2 (193-270)||(41461599-41461676)
chr2 (147-271)||(784831-784955)
chr2 (174-230)||(11684655-11684711)
chr2 (147-226)||(27033528-27033607)
chr2 (193-268)||(10480119-10480194)
chr2 (193-268)||(17180297-17180372)
chr2 (193-270)||(1583807-1583884)
chr2 (193-266)||(11532251-11532324)
chr2 (193-266)||(11793897-11793970)
chr2 (133-230)||(11824704-11824801)
chr2 (127-230)||(3345783-3345887)
chr2 (193-268)||(769036-769111)
chr2 (193-268)||(33189255-33189330)
chr2 (127-193)||(8736430-8736496)
chr2 (194-268)||(11141305-11141379)
chr2 (193-270)||(13017777-13017854)
chr2 (193-270)||(35047677-35047754)
chr2 (193-270)||(45094469-45094546)
chr2 (193-268)||(3092282-3092357)
chr2 (129-192)||(11607241-11607304)
chr2 (147-230)||(14537237-14537320)
chr2 (183-266)||(44256181-44256263)
chr2 (194-260)||(30698289-30698355)
chr2 (127-196)||(21504468-21504537)
chr2 (198-270)||(8735842-8735914)
chr2 (121-193)||(20935719-20935790)
chr2 (193-265)||(28740599-28740671)
chr2 (123-162)||(769032-769071)
chr2 (123-162)||(11141301-11141340)
chr2 (129-192)||(11595339-11595402)
chr2 (193-268)||(39630225-39630299)
chr2 (125-162)||(10480117-10480154)
chr2 (211-260)||(11716501-11716550)
chr2 (121-162)||(17180291-17180332)
chr2 (125-166)||(19231301-19231342)
chr2 (125-162)||(33189295-33189332)
chr2 (124-193)||(44205647-44205716)
chr2 (194-242)||(7167666-7167714)
chr2 (126-162)||(14537198-14537234)
chr2 (193-241)||(32839646-32839694)
chr2 (125-193)||(41585679-41585747)
chr2 (127-162)||(1583847-1583882)
chr2 (193-268)||(17905654-17905729)
chr2 (193-272)||(40026060-40026139)
chr2 (127-162)||(41461639-41461674)
chr2 (194-268)||(7228011-7228085)
chr2 (193-231)||(11607258-11607296)
chr2 (193-231)||(14954351-14954389)
chr2 (121-162)||(7228050-7228091)
chr2 (193-230)||(8736439-8736476)
chr2 (125-162)||(11684597-11684634)
chr2 (233-268)||(11684696-11684731)
chr2 (127-158)||(35047721-35047752)
chr2 (147-193)||(11532242-11532288)
chr2 (193-231)||(11595356-11595394)
chr2 (127-193)||(32840181-32840247)
chr2 (147-193)||(45094460-45094506)
chr2 (194-263)||(740709-740778)
chr2 (233-270)||(2924776-2924813)
chr2 (125-162)||(3092280-3092317)
chr2 (147-184)||(11716446-11716483)
chr2 (129-162)||(11793897-11793930)
chr2 (233-270)||(14537305-14537342)
chr2 (193-230)||(20935744-20935781)
chr2 (147-196)||(40026102-40026151)
chr2 (194-242)||(11532169-11532217)
chr2 (194-230)||(32840191-32840227)
[»] chr1 (88 HSPs)
chr1 (131-268)||(23536067-23536204)
chr1 (147-270)||(15034697-15034820)
chr1 (147-268)||(4038075-4038196)
chr1 (124-266)||(40264045-40264187)
chr1 (127-267)||(32572940-32573080)
chr1 (121-268)||(27935498-27935644)
chr1 (147-264)||(27804269-27804386)
chr1 (147-268)||(15034659-15034780)
chr1 (127-226)||(17502222-17502321)
chr1 (147-266)||(34756465-34756584)
chr1 (147-266)||(50005117-50005236)
chr1 (127-245)||(37214842-37214959)
chr1 (173-270)||(30190200-30190297)
chr1 (125-270)||(45565392-45565537)
chr1 (125-204)||(15245458-15245537)
chr1 (147-230)||(45565432-45565515)
chr1 (127-230)||(5474437-5474545)
chr1 (147-263)||(28745835-28745950)
chr1 (147-270)||(4038113-4038236)
chr1 (147-270)||(34756425-34756548)
chr1 (147-266)||(38277453-38277571)
chr1 (125-238)||(5474415-5474528)
chr1 (193-268)||(26501077-26501152)
chr1 (125-230)||(17502196-17502301)
chr1 (193-270)||(24273218-24273295)
chr1 (193-271)||(47165210-47165288)
chr1 (151-268)||(27804307-27804424)
chr1 (125-226)||(34007382-34007478)
chr1 (193-272)||(6470684-6470763)
chr1 (127-226)||(34007358-34007452)
chr1 (194-268)||(38277415-38277489)
chr1 (193-270)||(44410309-44410386)
chr1 (196-268)||(32287934-32288006)
chr1 (125-193)||(50471766-50471834)
chr1 (193-268)||(8224768-8224843)
chr1 (147-268)||(44410349-44410470)
chr1 (147-268)||(50005079-50005200)
chr1 (147-230)||(23536105-23536188)
chr1 (194-268)||(43622977-43623051)
chr1 (193-259)||(44570687-44570753)
chr1 (180-226)||(47074177-47074223)
chr1 (127-193)||(48953587-48953652)
chr1 (193-266)||(28632584-28632656)
chr1 (127-192)||(32128048-32128113)
chr1 (125-193)||(41823149-41823217)
chr1 (123-162)||(23536063-23536102)
chr1 (151-266)||(28745799-28745913)
chr1 (193-268)||(29446750-29446824)
chr1 (193-268)||(49659217-49659291)
chr1 (193-230)||(32572960-32572997)
chr1 (193-274)||(34003371-34003452)
chr1 (182-270)||(25889156-25889243)
chr1 (193-265)||(37036947-37037019)
chr1 (125-193)||(37447348-37447416)
chr1 (193-249)||(37448399-37448455)
chr1 (129-193)||(41822532-41822596)
chr1 (193-265)||(51847855-51847926)
chr1 (127-162)||(15034783-15034818)
chr1 (127-162)||(24273258-24273293)
chr1 (127-162)||(30190260-30190295)
chr1 (147-230)||(40264068-40264151)
chr1 (119-157)||(31166302-31166340)
chr1 (195-269)||(32647300-32647374)
chr1 (147-193)||(47165201-47165247)
chr1 (125-162)||(8224766-8224803)
chr1 (193-230)||(15245480-15245517)
chr1 (125-162)||(26501117-26501154)
chr1 (125-162)||(43623016-43623053)
chr1 (132-193)||(44571225-44571285)
chr1 (193-249)||(946932-946988)
chr1 (193-249)||(37447900-37447956)
chr1 (203-270)||(946374-946440)
chr1 (193-268)||(31166310-31166385)
chr1 (193-256)||(31195468-31195531)
chr1 (233-276)||(32128040-32128083)
chr1 (193-268)||(39887127-39887202)
chr1 (129-184)||(47074156-47074210)
chr1 (147-188)||(29446788-29446828)
chr1 (193-230)||(32128068-32128105)
chr1 (233-270)||(32572938-32572975)
chr1 (193-230)||(37214903-37214939)
chr1 (233-270)||(37214924-37214961)
chr1 (233-266)||(41822563-41822596)
chr1 (193-230)||(44571239-44571276)
chr1 (193-241)||(15467961-15468009)
chr1 (126-162)||(32287971-32288007)
chr1 (213-269)||(32652205-32652261)
chr1 (133-193)||(52135614-52135674)
[»] chr3 (89 HSPs)
chr3 (147-268)||(44692860-44692981)
chr3 (131-268)||(27251916-27252053)
chr3 (127-270)||(46429414-46429557)
chr3 (147-268)||(9129382-9129503)
chr3 (147-268)||(9137489-9137610)
chr3 (125-270)||(28092212-28092357)
chr3 (121-230)||(332012-332122)
chr3 (147-268)||(5415783-5415904)
chr3 (125-230)||(25655335-25655440)
chr3 (147-231)||(44436296-44436380)
chr3 (147-270)||(31070444-31070567)
chr3 (157-274)||(46672770-46672881)
chr3 (171-270)||(39110392-39110491)
chr3 (147-270)||(44692820-44692943)
chr3 (151-270)||(47284268-47284387)
chr3 (127-268)||(44436258-44436404)
chr3 (125-266)||(39215855-39215995)
chr3 (147-268)||(5415821-5415942)
chr3 (147-268)||(9129344-9129465)
chr3 (147-268)||(9137451-9137572)
chr3 (127-230)||(25655315-25655418)
chr3 (193-268)||(49457343-49457418)
chr3 (147-249)||(31070425-31070527)
chr3 (193-270)||(36397986-36398063)
chr3 (193-270)||(48947603-48947680)
chr3 (194-270)||(47767430-47767506)
chr3 (193-264)||(21307529-21307600)
chr3 (193-268)||(34088571-34088646)
chr3 (127-230)||(331993-332096)
chr3 (194-270)||(37054392-37054468)
chr3 (194-270)||(53470427-53470503)
chr3 (193-260)||(19475824-19475891)
chr3 (194-268)||(42005951-42006025)
chr3 (124-193)||(2104749-2104818)
chr3 (194-279)||(31189395-31189480)
chr3 (193-272)||(37321546-37321625)
chr3 (193-268)||(53129840-53129915)
chr3 (123-193)||(9007443-9007513)
chr3 (123-173)||(27485468-27485518)
chr3 (147-220)||(46672770-46672837)
chr3 (147-189)||(49457381-49457423)
chr3 (123-196)||(38506861-38506934)
chr3 (193-249)||(30766572-30766628)
chr3 (125-193)||(54761552-54761620)
chr3 (193-268)||(671616-671691)
chr3 (193-268)||(7302346-7302421)
chr3 (147-230)||(27251932-27252015)
chr3 (122-165)||(37321619-37321662)
chr3 (151-266)||(42130694-42130809)
chr3 (148-230)||(28092253-28092335)
chr3 (204-262)||(44288467-44288525)
chr3 (205-270)||(30767102-30767167)
chr3 (125-162)||(42005990-42006027)
chr3 (125-162)||(44436256-44436293)
chr3 (127-196)||(47284188-47284257)
chr3 (125-162)||(49457341-49457378)
chr3 (127-162)||(36398026-36398061)
chr3 (127-162)||(46672840-46672875)
chr3 (127-162)||(47767432-47767467)
chr3 (124-162)||(9129468-9129506)
chr3 (124-162)||(9137575-9137613)
chr3 (214-264)||(35279920-35279970)
chr3 (125-162)||(27252018-27252055)
chr3 (125-162)||(35279939-35279976)
chr3 (193-230)||(46429434-46429471)
chr3 (193-249)||(7976567-7976623)
chr3 (212-268)||(46001364-46001420)
chr3 (199-271)||(46635854-46635926)
chr3 (233-269)||(47714286-47714322)
chr3 (193-265)||(52527039-52527111)
chr3 (233-268)||(332081-332116)
chr3 (127-162)||(37054394-37054429)
chr3 (233-268)||(54761583-54761618)
chr3 (123-166)||(55460354-55460397)
chr3 (124-162)||(7302343-7302381)
chr3 (147-193)||(13176550-13176596)
chr3 (147-193)||(21307520-21307566)
chr3 (200-230)||(27485492-27485522)
chr3 (160-206)||(40929658-40929704)
chr3 (125-162)||(671656-671693)
chr3 (125-162)||(34088569-34088606)
chr3 (147-184)||(37321588-37321625)
chr3 (193-230)||(38506873-38506910)
chr3 (193-238)||(42130776-42130821)
chr3 (233-270)||(46429412-46429449)
chr3 (193-226)||(47284268-47284301)
chr3 (125-162)||(53129880-53129917)
chr3 (224-272)||(2732635-2732683)
chr3 (194-242)||(19475923-19475971)
[»] chr5 (106 HSPs)
chr5 (147-270)||(15373958-15374081)
chr5 (147-270)||(9764376-9764499)
chr5 (147-270)||(20523131-20523254)
chr5 (151-271)||(2316420-2316540)
chr5 (151-268)||(32390014-32390131)
chr5 (147-268)||(40809341-40809462)
chr5 (147-268)||(15373998-15374119)
chr5 (147-268)||(23092000-23092121)
chr5 (147-270)||(32470920-32471041)
chr5 (173-264)||(16515009-16515099)
chr5 (129-268)||(40643838-40643976)
chr5 (127-268)||(34982216-34982348)
chr5 (147-230)||(40643856-40643938)
chr5 (147-268)||(9764338-9764459)
chr5 (154-267)||(20523178-20523291)
chr5 (193-274)||(26281264-26281345)
chr5 (129-266)||(28828369-28828504)
chr5 (195-266)||(2721557-2721628)
chr5 (147-266)||(32389974-32390093)
chr5 (147-268)||(2316378-2316500)
chr5 (190-268)||(15804322-15804400)
chr5 (193-271)||(22766949-22767027)
chr5 (193-279)||(37722889-37722975)
chr5 (147-268)||(32470882-32471003)
chr5 (194-266)||(19533903-19533975)
chr5 (125-193)||(22305110-22305178)
chr5 (193-267)||(3563278-3563352)
chr5 (162-268)||(6634015-6634120)
chr5 (124-196)||(15270837-15270909)
chr5 (194-270)||(22303866-22303942)
chr5 (193-268)||(16515102-16515177)
chr5 (193-268)||(25935285-25935360)
chr5 (193-268)||(40090409-40090484)
chr5 (125-183)||(2550326-2550384)
chr5 (127-193)||(33146191-33146257)
chr5 (193-268)||(927302-927377)
chr5 (147-270)||(40809379-40809502)
chr5 (193-268)||(41762210-41762285)
chr5 (194-266)||(37145497-37145569)
chr5 (193-264)||(9894317-9894388)
chr5 (147-270)||(23091961-23092083)
chr5 (193-268)||(32250093-32250167)
chr5 (147-197)||(3563315-3563365)
chr5 (193-267)||(33245367-33245441)
chr5 (135-196)||(17542344-17542405)
chr5 (193-266)||(20320643-20320716)
chr5 (213-266)||(28828369-28828422)
chr5 (194-266)||(14834826-14834898)
chr5 (124-192)||(28489478-28489546)
chr5 (129-193)||(28490013-28490076)
chr5 (194-270)||(35379342-35379417)
chr5 (127-166)||(33146061-33146100)
chr5 (147-193)||(22766990-22767036)
chr5 (194-271)||(11601037-11601113)
chr5 (128-193)||(12064454-12064519)
chr5 (125-162)||(15374084-15374121)
chr5 (193-230)||(22305132-22305169)
chr5 (125-162)||(25935325-25935362)
chr5 (125-162)||(40643941-40643978)
chr5 (125-162)||(41762250-41762287)
chr5 (194-230)||(2550348-2550384)
chr5 (214-266)||(15804399-15804451)
chr5 (148-230)||(34982254-34982328)
chr5 (127-162)||(15804322-15804357)
chr5 (127-166)||(22302539-22302578)
chr5 (127-162)||(22303905-22303940)
chr5 (127-162)||(22766952-22766987)
chr5 (147-186)||(26281262-26281301)
chr5 (125-162)||(927300-927337)
chr5 (129-162)||(2721595-2721628)
chr5 (223-268)||(5658776-5658821)
chr5 (193-270)||(6634098-6634175)
chr5 (193-230)||(15270849-15270886)
chr5 (193-230)||(17542356-17542393)
chr5 (193-230)||(33146211-33146248)
chr5 (125-162)||(34982214-34982251)
chr5 (233-270)||(34982313-34982350)
chr5 (125-158)||(40090453-40090486)
chr5 (213-249)||(13243478-13243514)
chr5 (193-229)||(28490031-28490067)
chr5 (131-162)||(9894357-9894388)
chr5 (193-268)||(10314649-10314724)
chr5 (233-268)||(15270871-15270906)
chr5 (125-156)||(23092092-23092123)
chr5 (127-162)||(26281304-26281339)
chr5 (127-162)||(37722929-37722964)
chr5 (128-162)||(3563278-3563312)
chr5 (128-162)||(33245407-33245441)
chr5 (127-193)||(34105089-34105155)
chr5 (193-267)||(37090282-37090356)
chr5 (124-162)||(37145536-37145574)
chr5 (194-236)||(37241598-37241640)
chr5 (147-193)||(37722880-37722926)
chr5 (116-162)||(40809330-40809376)
chr5 (125-162)||(5658774-5658811)
chr5 (129-162)||(15804418-15804451)
chr5 (129-162)||(19533942-19533975)
chr5 (128-157)||(20523262-20523291)
chr5 (233-270)||(33146059-33146096)
chr5 (233-270)||(33146189-33146226)
chr5 (238-271)||(34105086-34105119)
chr5 (194-230)||(12064464-12064500)
chr5 (219-271)||(13243514-13243566)
chr5 (193-229)||(17492643-17492679)
chr5 (153-193)||(31367932-31367972)
chr5 (125-161)||(32250134-32250169)
[»] chr7 (87 HSPs)
chr7 (127-268)||(40853987-40854129)
chr7 (147-273)||(29065857-29065983)
chr7 (147-268)||(40110775-40110897)
chr7 (147-268)||(2057395-2057516)
chr7 (128-268)||(44915195-44915340)
chr7 (147-268)||(49052786-49052906)
chr7 (147-270)||(5644715-5644838)
chr7 (147-270)||(34388303-34388426)
chr7 (147-271)||(43955555-43955676)
chr7 (147-268)||(29065819-29065940)
chr7 (147-268)||(43955517-43955635)
chr7 (147-268)||(40110737-40110859)
chr7 (193-268)||(5644677-5644752)
chr7 (125-266)||(46069402-46069545)
chr7 (147-268)||(21635885-21636006)
chr7 (123-206)||(31913232-31913315)
chr7 (195-270)||(6498751-6498826)
chr7 (193-270)||(26162121-26162198)
chr7 (147-270)||(2057433-2057556)
chr7 (193-268)||(31632722-31632797)
chr7 (147-270)||(46481984-46482106)
chr7 (193-271)||(23548595-23548673)
chr7 (193-270)||(28539152-28539229)
chr7 (199-270)||(34398938-34399010)
chr7 (196-267)||(9784918-9784989)
chr7 (193-268)||(35776939-35777014)
chr7 (128-193)||(30587878-30587943)
chr7 (193-269)||(18789230-18789306)
chr7 (193-268)||(39342626-39342701)
chr7 (193-271)||(35455801-35455879)
chr7 (193-270)||(23455231-23455308)
chr7 (125-193)||(30080776-30080844)
chr7 (193-268)||(14603246-14603321)
chr7 (147-238)||(44915233-44915324)
chr7 (194-268)||(25189211-25189285)
chr7 (194-268)||(30524255-30524329)
chr7 (127-193)||(32650591-32650657)
chr7 (147-237)||(49052823-49052913)
chr7 (193-262)||(21635969-21636038)
chr7 (151-268)||(34388265-34388382)
chr7 (193-238)||(46069421-46069466)
chr7 (193-273)||(29639199-29639279)
chr7 (122-162)||(39342666-39342706)
chr7 (127-193)||(13814969-13815035)
chr7 (196-242)||(43791116-43791162)
chr7 (125-162)||(14603286-14603323)
chr7 (127-192)||(19865530-19865595)
chr7 (125-162)||(31632720-31632757)
chr7 (129-193)||(14790134-14790197)
chr7 (127-162)||(26162161-26162196)
chr7 (127-162)||(28539192-28539227)
chr7 (127-162)||(34398973-34399008)
chr7 (127-162)||(35455804-35455839)
chr7 (194-248)||(22391572-22391626)
chr7 (194-264)||(30629061-30629131)
chr7 (193-266)||(3905643-3905716)
chr7 (125-162)||(35776979-35777016)
chr7 (125-193)||(40495248-40495314)
chr7 (193-230)||(40854007-40854044)
chr7 (129-162)||(43955638-43955671)
chr7 (194-230)||(14790151-14790187)
chr7 (194-230)||(32650611-32650647)
chr7 (127-162)||(6498789-6498824)
chr7 (115-162)||(23455271-23455318)
chr7 (127-162)||(23548635-23548670)
chr7 (123-158)||(25189254-25189289)
chr7 (221-268)||(29195709-29195756)
chr7 (131-162)||(30629061-30629092)
chr7 (127-158)||(31913309-31913340)
chr7 (129-193)||(36328771-36328837)
chr7 (191-230)||(45984378-45984417)
chr7 (191-230)||(45988738-45988777)
chr7 (128-162)||(9784955-9784989)
chr7 (147-193)||(18789221-18789267)
chr7 (124-162)||(29639239-29639277)
chr7 (193-230)||(13814978-13815015)
chr7 (147-196)||(31632760-31632809)
chr7 (237-274)||(31913309-31913346)
chr7 (233-270)||(32650589-32650626)
chr7 (233-270)||(40853985-40854022)
chr7 (125-162)||(40854094-40854131)
chr7 (128-193)||(45984359-45984424)
chr7 (128-193)||(45988719-45988784)
chr7 (193-241)||(18789544-18789592)
chr7 (194-230)||(19865539-19865575)
chr7 (194-242)||(31632828-31632876)
chr7 (127-163)||(40667359-40667395)
[»] chr4 (94 HSPs)
chr4 (147-270)||(857277-857400)
chr4 (147-270)||(28845909-28846032)
chr4 (129-270)||(11040966-11041105)
chr4 (151-268)||(41498532-41498649)
chr4 (127-266)||(26250911-26251050)
chr4 (147-268)||(7352850-7352971)
chr4 (125-270)||(14982278-14982422)
chr4 (170-271)||(49111373-49111474)
chr4 (147-244)||(1107076-1107173)
chr4 (147-268)||(15660183-15660304)
chr4 (147-266)||(10127976-10128095)
chr4 (193-270)||(36455905-36455982)
chr4 (147-263)||(28845876-28845992)
chr4 (194-271)||(55266860-55266937)
chr4 (128-267)||(4441338-4441468)
chr4 (147-226)||(14982318-14982396)
chr4 (151-266)||(42844585-42844700)
chr4 (147-268)||(36455945-36456085)
chr4 (127-212)||(12914054-12914139)
chr4 (193-270)||(15660267-15660344)
chr4 (194-271)||(31473846-31473923)
chr4 (147-271)||(1107090-1107214)
chr4 (147-266)||(7352814-7352933)
chr4 (194-268)||(1112605-1112679)
chr4 (194-260)||(1539649-1539715)
chr4 (185-270)||(467879-467962)
chr4 (193-266)||(4896716-4896789)
chr4 (193-270)||(10128058-10128135)
chr4 (194-265)||(10633035-10633106)
chr4 (147-241)||(857266-857360)
chr4 (440-505)||(566622-566687)
chr4 (193-270)||(2125855-2125932)
chr4 (177-230)||(4441396-4441449)
chr4 (129-193)||(42775625-42775689)
chr4 (199-270)||(11348327-11348398)
chr4 (193-268)||(42844543-42844618)
chr4 (193-270)||(1112706-1112783)
chr4 (196-273)||(16516166-16516243)
chr4 (193-270)||(35470120-35470197)
chr4 (200-270)||(4896646-4896716)
chr4 (127-193)||(53760779-53760845)
chr4 (219-268)||(31742874-31742923)
chr4 (193-272)||(41498485-41498565)
chr4 (147-230)||(26250947-26251030)
chr4 (194-268)||(42776637-42776711)
chr4 (197-270)||(5715742-5715815)
chr4 (123-192)||(21012566-21012635)
chr4 (126-266)||(31742778-31742924)
chr4 (127-209)||(36455907-36456007)
chr4 (193-241)||(29091164-29091212)
chr4 (147-230)||(11041005-11041088)
chr4 (127-162)||(31473849-31473884)
chr4 (127-162)||(49111436-49111471)
chr4 (122-193)||(56339146-56339217)
chr4 (135-193)||(17727091-17727149)
chr4 (180-222)||(32724961-32725003)
chr4 (131-193)||(40338241-40338303)
chr4 (180-226)||(46724195-46724241)
chr4 (125-158)||(1112603-1112636)
chr4 (129-162)||(7352814-7352847)
chr4 (125-162)||(7352936-7352973)
chr4 (121-162)||(31947584-31947625)
chr4 (125-162)||(36456050-36456087)
chr4 (221-266)||(42542979-42543024)
chr4 (193-230)||(42775643-42775680)
chr4 (129-166)||(46243111-46243148)
chr4 (129-166)||(52295061-52295098)
chr4 (130-162)||(10633035-10633067)
chr4 (193-268)||(41139475-41139548)
chr4 (127-163)||(47108318-47108354)
chr4 (151-191)||(55266852-55266892)
chr4 (127-162)||(857363-857398)
chr4 (127-162)||(2125857-2125892)
chr4 (193-268)||(10354342-10354417)
chr4 (127-162)||(15660307-15660342)
chr4 (127-162)||(16516171-16516206)
chr4 (233-268)||(21012596-21012631)
chr4 (233-272)||(26251015-26251054)
chr4 (127-193)||(26534506-26534577)
chr4 (123-162)||(41498614-41498653)
chr4 (193-248)||(46242542-46242597)
chr4 (128-162)||(4441338-4441372)
chr4 (147-193)||(29091175-29091221)
chr4 (127-193)||(40548207-40548273)
chr4 (147-193)||(41139511-41139557)
chr4 (124-166)||(54566187-54566229)
chr4 (147-184)||(4896716-4896753)
chr4 (193-238)||(26534523-26534568)
chr4 (129-162)||(42542991-42543024)
chr4 (129-166)||(46724226-46724263)
chr4 (194-230)||(17727103-17727139)
chr4 (151-187)||(36456007-36456043)
chr4 (194-230)||(40338251-40338287)
chr4 (194-230)||(56339171-56339207)
[»] chr8 (91 HSPs)
chr8 (147-268)||(17110869-17110990)
chr8 (127-264)||(30435250-30435385)
chr8 (127-268)||(42711304-42711439)
chr8 (147-274)||(13404821-13404948)
chr8 (147-270)||(17110907-17111030)
chr8 (122-226)||(42739944-42740048)
chr8 (147-266)||(3853654-3853773)
chr8 (147-266)||(3858112-3858231)
chr8 (125-270)||(14799977-14800121)
chr8 (195-268)||(40046804-40046877)
chr8 (193-272)||(44889350-44889429)
chr8 (125-230)||(38573433-38573543)
chr8 (193-270)||(3853614-3853691)
chr8 (193-270)||(3858072-3858149)
chr8 (203-271)||(33902664-33902732)
chr8 (147-268)||(33902705-33902825)
chr8 (147-230)||(14799999-14800081)
chr8 (194-270)||(28324671-28324747)
chr8 (193-268)||(23011734-23011809)
chr8 (193-268)||(33377305-33377380)
chr8 (127-193)||(34008799-34008865)
chr8 (194-268)||(36103101-36103175)
chr8 (194-271)||(515541-515618)
chr8 (193-266)||(4156251-4156324)
chr8 (193-270)||(24044958-24045035)
chr8 (193-270)||(29257359-29257436)
chr8 (125-193)||(30444932-30445000)
chr8 (193-265)||(35979012-35979084)
chr8 (147-206)||(4156229-4156288)
chr8 (194-249)||(13404912-13404967)
chr8 (127-193)||(29611388-29611454)
chr8 (193-271)||(44346686-44346764)
chr8 (193-266)||(29482815-29482888)
chr8 (123-183)||(7202861-7202921)
chr8 (194-249)||(8049273-8049328)
chr8 (130-193)||(26520438-26520501)
chr8 (188-271)||(37268086-37268169)
chr8 (131-230)||(42739969-42740068)
chr8 (194-268)||(14239-14312)
chr8 (204-262)||(8689138-8689196)
chr8 (194-268)||(33986004-33986078)
chr8 (127-175)||(7202921-7202969)
chr8 (193-271)||(9982634-9982711)
chr8 (191-249)||(40046872-40046930)
chr8 (211-268)||(14991692-14991749)
chr8 (191-236)||(32626023-32626068)
chr8 (125-162)||(33377345-33377382)
chr8 (133-238)||(38573420-38573524)
chr8 (121-162)||(42711404-42711445)
chr8 (194-230)||(7202885-7202921)
chr8 (208-268)||(31807409-31807468)
chr8 (193-268)||(1088285-1088360)
chr8 (127-162)||(3853616-3853651)
chr8 (127-162)||(3858074-3858109)
chr8 (233-268)||(7202865-7202900)
chr8 (126-193)||(8469514-8469581)
chr8 (193-268)||(11744727-11744802)
chr8 (123-158)||(14991688-14991723)
chr8 (127-162)||(29257399-29257434)
chr8 (124-162)||(27322697-27322735)
chr8 (233-270)||(7202934-7202971)
chr8 (193-230)||(26520447-26520484)
chr8 (223-268)||(27322687-27322732)
chr8 (193-230)||(30444941-30444978)
chr8 (147-184)||(32626029-32626066)
chr8 (193-230)||(34008819-34008856)
chr8 (125-162)||(36103099-36103136)
chr8 (129-161)||(29482856-29482888)
chr8 (194-230)||(29611408-29611444)
chr8 (122-165)||(8409944-8409987)
chr8 (147-194)||(11744717-11744764)
chr8 (127-162)||(24044960-24044995)
chr8 (127-162)||(28324710-28324745)
chr8 (233-268)||(30444963-30444998)
chr8 (233-268)||(42739949-42739984)
chr8 (131-162)||(44346726-44346757)
chr8 (127-162)||(44889354-44889389)
chr8 (233-271)||(8409947-8409985)
chr8 (193-231)||(13144620-13144658)
chr8 (127-161)||(14800085-14800119)
chr8 (124-166)||(36625251-36625293)
chr8 (121-162)||(515580-515621)
chr8 (121-162)||(4156291-4156332)
chr8 (125-162)||(23011732-23011769)
chr8 (233-270)||(29611386-29611423)
chr8 (125-162)||(32626082-32626119)
chr8 (233-270)||(34008797-34008834)
chr8 (128-157)||(34388527-34388556)
chr8 (125-162)||(40046802-40046839)
chr8 (220-268)||(32626069-32626117)
chr8 (130-162)||(35979052-35979084)
[»] scaffold1562 (3 HSPs)
scaffold1562 (147-266)||(443-562)
scaffold1562 (147-268)||(405-526)
scaffold1562 (129-162)||(529-562)
[»] scaffold1158 (3 HSPs)
scaffold1158 (147-266)||(2031-2150)
scaffold1158 (147-268)||(2067-2188)
scaffold1158 (129-162)||(2031-2064)
[»] scaffold0044 (2 HSPs)
scaffold0044 (147-238)||(56304-56395)
scaffold0044 (124-264)||(56284-56429)
[»] scaffold0009 (5 HSPs)
scaffold0009 (193-271)||(41994-42072)
scaffold0009 (211-268)||(42080-42137)
scaffold0009 (124-162)||(42102-42140)
scaffold0009 (147-188)||(42035-42076)
scaffold0009 (122-162)||(41992-42032)
[»] scaffold0048 (3 HSPs)
scaffold0048 (193-266)||(82945-83018)
scaffold0048 (147-191)||(82981-83025)
scaffold0048 (129-162)||(82945-82978)
[»] scaffold0169 (2 HSPs)
scaffold0169 (193-268)||(4075-4150)
scaffold0169 (147-193)||(4113-4159)
[»] scaffold0027 (1 HSPs)
scaffold0027 (193-267)||(10887-10961)
[»] scaffold0240 (3 HSPs)
scaffold0240 (127-206)||(17561-17640)
scaffold0240 (233-270)||(17605-17642)
scaffold0240 (198-230)||(17588-17620)
[»] scaffold0301 (2 HSPs)
scaffold0301 (193-266)||(7153-7226)
scaffold0301 (129-162)||(7153-7186)
[»] scaffold0400 (2 HSPs)
scaffold0400 (193-267)||(4496-4570)
scaffold0400 (128-162)||(4536-4570)
[»] scaffold0365 (2 HSPs)
scaffold0365 (193-267)||(5140-5214)
scaffold0365 (128-162)||(5180-5214)
[»] scaffold0039 (2 HSPs)
scaffold0039 (127-193)||(109049-109115)
scaffold0039 (233-271)||(109046-109084)
[»] scaffold0318 (1 HSPs)
scaffold0318 (193-270)||(2865-2941)
[»] scaffold0129 (2 HSPs)
scaffold0129 (193-266)||(19200-19272)
scaffold0129 (194-266)||(19784-19855)
[»] scaffold0065 (1 HSPs)
scaffold0065 (124-193)||(9575-9645)
[»] scaffold0002 (1 HSPs)
scaffold0002 (147-193)||(130392-130438)


Alignment Details
Target: chr6 (Bit Score: 146; Significance: 1e-76; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 272 - 433
Target Start/End: Complemental strand, 12097670 - 12097509
Alignment:
Q  272 agtctaaagattctccaccgttgcctttccaatacaaaacatatcatcaacctttaatatgtttcacataataggatatgagagtgtatattttaaggag 371  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12097670 agtctaaagattctccaccgttgcctttccaatacaaaacatagcatcaacctttaatatgtttcacataataggataggagagtgtatattttaaggag 12097571  T
Q  372 tataatgtaatttaaacatctccgaatgagagtgtaatttactcaaattcatcatcagcgac 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  12097570 tataatgtaatttaaacatctccgaatgagagtgtaatttactcaaactcatcatctgcgac 12097509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 12097781 - 12097668
Alignment:
Q  18 atatgcatgttttctagactctaagcatctcttctatcctcgttactattctacactaaagtgttcaattgtcttatatcatattttgaaacgtctcaac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12097781 atatgcatgttttctagactctaagcatctcttctatcctcgttactattctacactaaagtgttcaattgtcttatatcatatttcgaaacgtctcaac 12097682  T
Q  118 aacaccttaagagt 131  Q
    |||||||| |||||    
T  12097681 aacaccttcagagt 12097668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 6919828 - 6919710
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  6919828 aatgttttgagggaattcaacca-tttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaacca 6919730  T
Q  247 ttcatccatccaaacacact 266  Q
    ||| ||||||||||||||||    
T  6919729 ttcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 9285790 - 9285645
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||| || ||||||| |    | ||||||| ||||||||||||||||||||||||    
T  9285790 taagagtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaa 9285691  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||    
T  9285690 aacattacattccctcaaaacattcccccatccaaacacactctaa 9285645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 776201 - 776078
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||| | || |||||||||||||| ||||||||||||| ||||||||||||||    
T  776201 aatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacattacattccctcaaaaca 776102  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||  |||||| |||||||||||||    
T  776101 tttctccatctaaacacactctaa 776078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 9763050 - 9763171
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| | || ||||||||||||||||||||| ||| |||||||| |    
T  9763050 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattacattacctcaaaata 9763149  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||| ||||||||||||||||||    
T  9763150 ttcctccatccaaacacactct 9763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 9285685 - 9285768
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9285685 aatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 12097483 - 12097409
Alignment:
Q  432 acttgactttgaattctctctctttagtctccaaacagtttctcttcatcacagaccgtcttcgattttcactta 506  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12097483 acttgactttgaattctctctctttagtctccaaacaatttctcttcatcagagaccgtcttcgattttcactta 12097409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 6919746 - 6919866
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | |||||||||| ||| | ||||||||||||||||||||||  |||||||||||||    
T  6919746 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaaca 6919844  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  6919845 ttcccccatccaaacacactct 6919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 29889432 - 29889509
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaa 29889509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 34244978 - 34245055
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34244978 gaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaa 34245055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 15299510 - 15299587
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||| |||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattc-cccatccaaacacattctaaaa 15299587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 28918239 - 28918165
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  28918239 aattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 776118 - 776239
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||| |||||||| |||||||| | ||||| |    | |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  776118 aatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaaca 776217  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||   | |||||||||||||||    
T  776218 ttttcctatccaaacacactct 776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 9763087 - 9763014
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   || ||||||||||||    
T  9763087 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 13487349 - 13487271
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||||||||||| ||||||||||||| |||| || |||||||||||||||||  ||||| |||||||||||||||    
T  13487349 aattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactctaaaa 13487271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 1195349 - 1195416
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||| |||||||    
T  1195349 taagagtgtgtttggatgggggaatgttttgagggatttcaaatactttgaggtgaattccattgttt 1195416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 8574759 - 8574693
Alignment:
Q  204 aaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||||||||||||| |||| |||||||||||   |||||||||||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaa 8574693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 1368552 - 1368475
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||  | ||||||||||| |||| |||| |||| |||||||||||| ||||||||||||||||||||    
T  1368552 gaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactctaa 1368475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 8475177 - 8475245
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||  ||||||||| ||||||||    
T  8475177 taagagtgtgtttggatggggaaatgttttgagggaattcaaatacttttgggtgaattccattgtttg 8475245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 8574760 - 8574824
Alignment:
Q  204 aaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||||||||||||||| |||| |||||||||||   |||||||||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 15299471 - 15299412
Alignment:
Q  196 ttcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccat 255  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 6919868 - 6919832
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaa 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  6919868 taagagtgtgtttggatgggggaatgttttgagggaa 6919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 11796339 - 11796261
Alignment:
Q  18 atatgcatgttttctagactct-aagcatctcttctatcctcgttactattctacactaaagtgttcaattgtcttatat 96  Q
    |||||||||||  ||||||||| ||||||||||||| |||| |||||||||||||  ||||||| ||||||||| |||||    
T  11796339 atatgcatgttc-ctagactcttaagcatctcttctctccttgttactattctactataaagtgctcaattgtcgtatat 11796261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 33733432 - 33733467
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaat 33733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 28918163 - 28918200
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28918163 taagagtgtgtttggatggaggaatgttttgagggaat 28918200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 34364818 - 34364770
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    ||||||||||||||||| || |||||||||| ||||||| |||||||||    
T  34364818 gaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 13487275 - 13487310
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaat 13487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 33733472 - 33733429
Alignment:
Q  228 attagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||| |||||||||||||||||  ||||||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactctaaa 33733429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 34245053 - 34245018
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaat 34245018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 15832540 - 15832486
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacatt 248  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||||| || |||||||    
T  15832540 aattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacatt 15832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 1195408 - 1195371
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  1195408 gaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6358249 - 6358302
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||| ||||||| || ||||| |||||||||||| ||| ||||||||||    
T  6358249 gaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaaca 6358302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 8574826 - 8574789
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  8574826 taagagtgtgtttggatggggaaatgttttgagtgaat 8574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 7132607 - 7132543
Alignment:
Q  440 ttgaattctctctctttagtctccaaacagtttctcttcatcacagaccgtcttcgattttcact 504  Q
    ||||||||||| ||||| ||||||||| |||| |||| |||||  ||||||| |||||| |||||    
T  7132607 ttgaattctctttcttttgtctccaaagagttcctctccatcatcgaccgtcgtcgattctcact 7132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 7135530 - 7135466
Alignment:
Q  440 ttgaattctctctctttagtctccaaacagtttctcttcatcacagaccgtcttcgattttcact 504  Q
    ||||||||||| ||||| ||||||||| |||| |||| |||||  ||||||| |||||| |||||    
T  7135530 ttgaattctctttcttttgtctccaaagagttcctctccatcatcgaccgtcgtcgattctcact 7135466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 14537340 - 14537199
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14537340 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaa 14537241  T
Q  227 cattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| |||||||||||||||||  |||||||||||||||||    
T  14537240 cattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 784914 - 784793
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||    
T  784914 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaaca 784815  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||  ||||||||||||||||||    
T  784814 tttttccatccaaacacactct 784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 11824819 - 11824718
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaaca 228  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcatctcaaagtagttgaattccctcaaaaca 11824720  T
Q  229 tt 230  Q
    ||    
T  11824719 tt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 11716502 - 11716406
Alignment:
Q  174 aaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11716502 aaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactctaa 11716406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 14365820 - 14365700
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgttt-gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14365820 aatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaac 14365723  T
Q  246 attcatccatccaaacacactct 268  Q
    ||||  |||||||||||||||||    
T  14365722 attcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 3345765 - 3345867
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagta-gttgaattccctcaaaac 227  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3345765 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtaaattctattgtttgaattcacctcaaagtacgttgaattccctcaaaac 3345864  T
Q  228 att 230  Q
    |||    
T  3345865 att 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 14954388 - 14954266
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattg-tttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| || | ||||||||||||||| || |||| |||| |||| ||||||||    
T  14954388 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaac 14954289  T
Q  246 attcatccatccaaacacactct 268  Q
    |||| || |||||||||||||||    
T  14954288 attcctctatccaaacacactct 14954266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 41461636 - 41461517
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||| || || |||||||||||||||||| ||| |||||||| |    
T  41461636 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaata 41461537  T
Q  247 ttcatccatccaaacacact 266  Q
    ||   |||||||||||||||    
T  41461536 tttccccatccaaacacact 41461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 14365738 - 14365860
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgttt-gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||||||||||||| ||||| |||||||||| |     | |||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  14365738 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaac 14365835  T
Q  246 attcatccatccaaacacactctaa 270  Q
    |||| ||||||||||||||||||||    
T  14365836 attcctccatccaaacacactctaa 14365860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 10244215 - 10244298
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  10244215 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtagttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 10244320 - 10244175
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||| |||| ||||||||||||||| |||||||||||| ||||| |||||| ||| |    |  |||||||||  ||||||||||||||||||||    
T  10244320 taagagtgtatttgaatgggggaatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 10244221  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||  |||||||| || ||||  |||||||||||||||||||    
T  10244220 aacattactttccctcagaatattctcccatccaaacacactctaa 10244175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 11684735 - 11684603
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctc 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |    | |||||||||         ||||||||||||    
T  11684735 cttaagagtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc---------ttgaattccctc 11684645  T
Q  223 aaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  11684644 aaaacattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 27033565 - 27033484
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaagt 274  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||| |||||    
T  27033565 gaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactcttaaagt 27033484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 41461599 - 41461676
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  41461599 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 41461676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 784831 - 784955
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||| ||| ||||| || ||||||| |    | |||||||||| |||||||||||||||||||||||||||| ||||| |||||| |    
T  784831 aatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaata 784930  T
Q  247 ttcatccatccaaacacactctaaa 271  Q
    |||  ||||||||||||||||||||    
T  784931 ttcccccatccaaacacactctaaa 784955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 11684655 - 11684711
Alignment:
Q  174 aaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11684655 aaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 27033528 - 27033607
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  | ||||||||||||||||    
T  27033528 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 10480194 - 10480119
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||  |||||||||||||||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 17180372 - 17180297
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||    
T  17180372 gaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 1583807 - 1583884
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 1583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 11532251 - 11532324
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||  |||||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 11793970 - 11793897
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||  |||||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 11824704 - 11824801
Alignment:
Q  133 tgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || ||||||| |    |  ||||||||| |||||||||||||||||||||||||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 3345887 - 3345783
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaac-cactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaa 225  Q
    |||| |||||||||||||| |||||||||||||||||||||  ||||| |||||||||| |    | ||||| |||| ||||||||||||||||||||||    
T  3345887 agagcgtgtttggatggggaaatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaa 3345788  T
Q  226 acatt 230  Q
    |||||    
T  3345787 acatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 769111 - 769036
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 33189255 - 33189330
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 8736496 - 8736430
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  8736496 agagtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 8736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 11141379 - 11141305
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  11141379 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 13017854 - 13017777
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||    ||||||||||||||||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactctaa 13017777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 35047677 - 35047754
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| ||||||||||| |||||| || ||| |||||||||||||  |||||||||||||||||||    
T  35047677 gaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactctaa 35047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 45094469 - 45094546
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||| | ||||||||| |||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||    
T  45094469 gaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactctaa 45094546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 3092357 - 3092282
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| ||| ||||||| ||||||| |||||||||| || ||||||||||||||||| |||||||||| |||||||    
T  3092357 gaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactct 3092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 11607241 - 11607304
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| |||||||||| |||||||    
T  11607241 agtgtgtttggatggggtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 14537237 - 14537320
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||| |||||||| ||||| |||||||||| |    | |||||||||| |||||||||||||||||||||||||||    
T  14537237 aatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 44256181 - 44256263
Alignment:
Q  183 tctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||| ||| |||| ||| ||||  |||||||||||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 30698355 - 30698289
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaa 260  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||  |||||||||    
T  30698355 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 21504468 - 21504537
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    ||||||||||||||| ||||||||||||||||||||||||  | ||| || ||||||| |||||||||||    
T  21504468 agagtgtgtttggatcggggaatgttttgagggaattcaaatattttgagatgaattccattgtttgaat 21504537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 8735914 - 8735842
Alignment:
Q  198 cacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||||||||    |||||||||||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactctaa 8735842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 20935719 - 20935790
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  20935719 acctttagagtgtgtttggatgggg-aatgttttgagggaattcaaatactttgatgtgaattccattgtttg 20935790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 28740671 - 28740599
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||   |||| |||||||||    
T  28740671 gaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 769032 - 769071
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  769032 cttaagagtgtgtttggatgggggaatgttttgagggaat 769071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 11141301 - 11141340
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11141301 cttaagagtgtgtttggatgggggaatgttttgagggaat 11141340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 11595339 - 11595402
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    ||||||||||||||||| ||||||||||||||||||||  | ||| |||||||||| |||||||    
T  11595339 agtgtgtttggatggggtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 39630299 - 39630225
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||| ||||||| || |||||||||||||||||| || ||||||||||||||||  ||||| ||||||||||||    
T  39630299 gaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactct 39630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 10480117 - 10480154
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10480117 taagagtgtgtttggatgggggaatgttttgagggaat 10480154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  211 ttgaattccctcaaaacattagattccctcaaaacattcatccatccaaa 260  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 17180291 - 17180332
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  17180291 accttaagagtgtgtttggatgagggaatgttttgagggaat 17180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 19231342 - 19231301
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  19231342 taagattgtgtttggatgggggaatgttttgagggaattcaa 19231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 33189332 - 33189295
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33189332 taagagtgtgtttggatgggggaatgttttgagggaat 33189295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 44205716 - 44205647
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  ||||| | || ||||||||| ||||    
T  44205716 ttaaaagtgtgtttggatggggaaatgttttgagggaattcaaatacttttatgtaaattctattatttg 44205647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 7167666 - 7167714
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaa 242  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  7167666 aattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 14537198 - 14537234
Alignment:
Q  126 aagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaat 14537234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 41585747 - 41585679
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||| | ||||||||||||||||||||  ||||| | ||||| | |||||||||    
T  41585747 taagagtgtgtttggatggtgaaatgttttgagggaattcaaatactttgaagtgaaatttattgtttg 41585679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 1583882 - 1583847
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaat 1583847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 17905729 - 17905654
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||| || ||||||||| | ||||||||| |||| ||||||||||||   ||||| ||||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 40026139 - 40026060
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    ||||||||||||||||| || |||| ||||||||||||| ||| |||||||| ||||  |||| |||||| | |||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaacatattctaaaa 40026060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 41461674 - 41461639
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaat 41461639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 7228011 - 7228085
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||| ||||||| ||| || |||||| ||||||||||| |||| |||||||||||   |||||||||||||||||    
T  7228011 aatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactct 7228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 11607296 - 11607258
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatta 231  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  11607296 gaattcacctcaaagtatttgaattccctcaaaacatta 11607258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 14954351 - 14954389
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatta 231  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  14954351 gaattcaccttaaagtagttgaattccctcaaaacatta 14954389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 7228091 - 7228050
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7228091 accttaagagtgtgtttggatggggaaatgttttgagagaat 7228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 8736439 - 8736476
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8736439 gaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 11684597 - 11684634
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11684597 taagaatgtgtttggatgggggaatgttttgagggaat 11684634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 11684696 - 11684731
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11684696 attccctcaaaacattcctccatccaaacacactct 11684731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 158
Target Start/End: Complemental strand, 35047752 - 35047721
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagg 158  Q
    ||||||||||||||||||||||||||||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgagg 35047721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 11532288 - 11532242
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  11532288 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 11532242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 11595394 - 11595356
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatta 231  Q
    |||||||||||||| || |||||||||||||||||||||    
T  11595394 gaattcacctcaaaatatttgaattccctcaaaacatta 11595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 32840247 - 32840181
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||| |||||||||| || ||||||||||||||||| ||  ||||| |||||||||  ||||||||    
T  32840247 agagtatgtttggatgaggaaatgttttgagggaatttaaatactttgaggtgaatttcattgtttg 32840181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 45094506 - 45094460
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||| ||| ||||||| |||||||| ||||||||    
T  45094506 aatgttttgagggaatttaactactttaaagtgaattccattgtttg 45094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 740778 - 740709
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacac 263  Q
    |||||||||||||  |  ||||||| | |||||||||| |||  ||||||||||| ||||||||||||||    
T  740778 aattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatttatccatccaaacac 740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 2924813 - 2924776
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| || |||||||||||||||||    
T  2924813 attccctcaaaacattcttctatccaaacacactctaa 2924776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 3092280 - 3092317
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  3092280 taagagtgtatttggatggaggaatgttttgagggaat 3092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 11716446 - 11716483
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattc 184  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  11716446 aatgttttgagggaattcaactactttgaggtgaattc 11716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 11793897 - 11793930
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaat 11793930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 14537305 - 14537342
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  14537305 attccctcaaaacattcccccatccaaacacactctaa 14537342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 20935781 - 20935744
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  20935781 gaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 40026102 - 40026151
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||||||||||| |||| ||  ||||| ||||||||||||||||||||||    
T  40026102 aatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaat 40026151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 11532169 - 11532217
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaa 242  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 32840191 - 32840227
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| || |||||||||||||||||    
T  32840191 aattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 6e-60; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 23536204 - 23536067
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23536204 tgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 23536105  T
Q  231 agattccctcaaaacattcatccatccaaacacactct 268  Q
    | |||||||||||||||||  |||||||||||||||||    
T  23536104 acattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 15034697 - 15034820
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15034697 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 15034796  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  15034797 ttcccccatccaaacacactctaa 15034820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 4038196 - 4038075
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4038196 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 4038097  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  ||| |||||||||||||    
T  4038096 ttcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 40264045 - 40264187
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctca 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||| || |||||||||||||    
T  40264045 ttaagagtgtgtttggataggggaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctca 40264144  T
Q  224 aaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||| ||| |||||||| ||||  |||||||||||||||    
T  40264145 aaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 32572940 - 32573080
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  | ||||||||||||||||    
T  32572940 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaa 32573039  T
Q  227 cattagattccctcaaaacattcatccatccaaacacactc 267  Q
    ||||| ||| |||||||| ||||  |||||||| |||||||    
T  32573040 cattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 121 - 268
Target Start/End: Original strand, 27935498 - 27935644
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccc 220  Q
    ||||| ||||||||||||||||||  |||||||||||  |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||    
T  27935498 acctttagagtgtgtttggatggga-aatgttttgagaaaattcaactactttcaggtgaattctattgtttgaattcaactcaaagtagttgaatttcc 27935596  T
Q  221 tcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||| |||||||||||| |||  ||||||||||||||||||    
T  27935597 tcaaaacattacattccctcaaaatatttctccatccaaacacactct 27935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 27804386 - 27804269
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  27804386 aatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaaca 27804287  T
Q  247 ttcatccatccaaacaca 264  Q
    |||  |||||||||||||    
T  27804286 ttcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 15034780 - 15034659
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  15034780 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 15034681  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||| ||||||||||||||||||    
T  15034680 ttcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 17502321 - 17502222
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  17502321 agagtgtgttttgattggggaatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 34756465 - 34756584
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |    
T  34756465 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaata 34756564  T
Q  247 ttcatccatccaaacacact 266  Q
    ||   |||||||||||||||    
T  34756565 tttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 50005117 - 50005236
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||| |||||||||  |||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |    
T  50005117 aatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 50005216  T
Q  247 ttcatccatccaaacacact 266  Q
    ||| ||||||||||||||||    
T  50005217 ttcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 37214959 - 37214842
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||| || |||||||| |||||||    
T  37214959 agagtgtgtttggatgggagaatgttttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaa 37214861  T
Q  227 cattagattccctcaaaac 245  Q
    ||||| ||| |||||||||    
T  37214860 cattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 30190200 - 30190297
Alignment:
Q  173 taaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  30190200 taaggggaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 30190297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 45565537 - 45565392
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||  |    | |||||||||| ||| |||||||||||||||||    
T  45565537 taagagtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaa 45565438  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| |||| ||||||||||||  |||||||||||||| ||||    
T  45565437 aacattacattctctcaaaacattcccccatccaaacacaccctaa 45565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 15245458 - 15245537
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15245458 taagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactca 15245537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 45565432 - 45565515
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45565432 aatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 5474545 - 5474437
Alignment:
Q  127 agagtgtgtttggatgggggaatgt-----tttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccct 221  Q
    ||||||||||||||| |||||||||     |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  5474545 agagtgtgtttggataggggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacttcaaagtaattaaattccct 5474446  T
Q  222 caaaacatt 230  Q
    |||||||||    
T  5474445 caaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 28745835 - 28745950
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| |    
T  28745835 aatggtttgagggaattcaatta-tttaaggtgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaata 28745933  T
Q  247 ttcatccatccaaacac 263  Q
    |||   |||||||||||    
T  28745934 ttctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 4038113 - 4038236
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||| ||| |    | |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |    
T  4038113 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaata 4038212  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  4038213 ttcccccatccaaacacactctaa 4038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 34756548 - 34756425
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34756548 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 34756449  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||| ||||||    
T  34756448 ttcccccatccaaacactctctaa 34756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 38277453 - 38277571
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| ||||| ||||||||| |||||||| ||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |    
T  38277453 aatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 38277552  T
Q  247 ttcatccatccaaacacact 266  Q
    |||  |||||||||||||||    
T  38277553 ttc-cccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 5474415 - 5474528
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||| | |||||||| |    | |||||||||| |||||||||||||||||||||    
T  5474415 taagagtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaa 5474514  T
Q  225 aacattagattccc 238  Q
    ||||||| ||||||    
T  5474515 aacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 26501077 - 26501152
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 17502196 - 17502301
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||| |||||||||| | |  | ||||||| || |||||||||||||||||||||    
T  17502196 taagagtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaa 17502295  T
Q  225 aacatt 230  Q
    ||||||    
T  17502296 aacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 24273218 - 24273295
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 24273295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 47165210 - 47165288
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactctaaa 47165288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 27804307 - 27804424
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    ||||||||||||||||| | ||| |||||||||| |    | ||||||| || |||||||||||||||| || |||||||| ||| |||||||||||||     
T  27804307 ttttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcc 27804406  T
Q  251 tccatccaaacacactct 268  Q
    ||||||||||||||||||    
T  27804407 tccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 34007478 - 34007382
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||| || ||||||| |     |||||||| ||||||||||||||||||||||||    
T  34007478 taagagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattcaa-----tgaattcaactcaaagtagttgaattccctcaa 34007384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 6470684 - 6470763
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||| |||||||||| | ||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  6470684 gaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactctaaaa 6470763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 34007358 - 34007452
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||||      ||||||||| ||||||||||||||||||||||||||    
T  34007358 agagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc-----attgaattcaactcaaagtagttgaattccctcaaaa 34007452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 38277489 - 38277415
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||   ||||||||||||||||    
T  38277489 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 44410386 - 44410309
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||  ||||||||| |||||||||    
T  44410386 gaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactctaa 44410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 32287934 - 32288006
Alignment:
Q  196 ttcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 50471766 - 50471834
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||| |||||||||    
T  50471766 taagagtgtgtttggatgggggaaagttttgagggaattcaaatactttcaggtgaattttattgtttg 50471834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 8224843 - 8224768
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| |||||||| || |||||||||||||||||| |||||||||||||||||   ||||||||||||||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 8224768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 44410349 - 44410470
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||| || ||||||||| | ||| |||||||||||||||| ||||| |||   ||| || ||||||||||||||||| ||| ||| |||||||| |    
T  44410349 aatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccactcaaaaataattgaattccctcaaaactttacattacctcaaaata 44410448  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  | |||||||||||||||    
T  44410449 ttccccaatccaaacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 50005200 - 50005079
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||| |||||||||| |||||||||||| |||| ||||||| |    
T  50005200 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 50005101  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||   ||||||||||||||||    
T  50005100 ttccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 23536105 - 23536188
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| ||||| |||||||||| |    |  ||||||||| |||||||||||||||||||||||||||    
T  23536105 aatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 43622977 - 43623051
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||| || ||||  |||||||||||| ||||| |||||||||||  |||||||||||||||||    
T  43622977 aattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactct 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 44570753 - 44570687
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaa 259  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||  ||||||||    
T  44570753 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 47074223 - 47074177
Alignment:
Q  180 aattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  47074223 aattctattgtttgaattcacctcaaagtagttgaattccttcaaaa 47074177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 48953587 - 48953652
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||||||||||||||| |||||||||  | ||| |||||||||||||||||||    
T  48953587 agagtgtgtttggatgggggaatgttttgaaggaattcaaata-tttgaggtgaattctattgtttg 48953652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 28632584 - 28632656
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||   ||||||||||||||    
T  28632584 gaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 32128048 - 32128113
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||||  ||||||||| |||||||    
T  32128048 agagtgtgtttagatgggggaatgttttgagggaattcaaatactttgtggtgaattccattgttt 32128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 41823217 - 41823149
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||||||||||||||||| |||||||||  || || || ||||||| ||||||||    
T  41823217 taagagtgtgtttggatgggggaatgttttgaaggaattcaaataccttgagatgaattccattgtttg 41823149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 23536063 - 23536102
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23536063 cttaagagtgtgtttggatgggggaatgttttgagggaat 23536102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 28745913 - 28745799
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    ||||||||||||||||| | ||| |||||||||| |    | |||||||||| ||| || ||||||||||||||| ||||| |||||||||||| ||||     
T  28745913 ttttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattcc 28745815  T
Q  251 tccatccaaacacact 266  Q
     ||||||||| |||||    
T  28745814 cccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 29446824 - 29446750
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||  || | ||||||||||||    
T  29446824 gaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactct 29446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 49659291 - 49659217
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| || |||||||||  ||||||| |||||||||| ||||||  |||||||||||||||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattc-cccatccaaacacactct 49659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 32572997 - 32572960
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32572997 gaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 34003452 - 34003371
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaagt 274  Q
    ||||||||||||||||| |||||| ||||||||| |||| ||| | | |||| |||||  |||||||||||||| |||||||    
T  34003452 gaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacactataaaagt 34003371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 25889243 - 25889156
Alignment:
Q  182 ttctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||| ||||||||| || ||||||||| ||||||||||| ||| |||||||| ||||   ||||| || |||||||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactctaa 25889156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 37036947 - 37037019
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    ||||| || ||||| || ||||||||||||||||||||| |||| ||||||||||||   |||||||||||||    
T  37036947 gaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 37447416 - 37447348
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||| |||||||||| ||||||||||||||| ||||||||  ||||| | |||||||| ||||||||    
T  37447416 taagagcgtgtttggataggggaatgttttgagagaattcaaatactttgatgtgaattccattgtttg 37447348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 37448399 - 37448455
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    |||||||| |||||||| || |||||||||||||||||| |||| ||||||||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattc 37448455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 41822596 - 41822532
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||   |||||||||||||||||||||  |||||||| ||||||| ||||||||    
T  41822596 agtgtgtttggatgaatgaatgttttgagggaattcaaatactttaagatgaattccattgtttg 41822532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 51847926 - 51847855
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    |||||||||| |||||| ||||||| | | ||||||||| ||| ||||||||||||| |||||||||||||||    
T  51847926 gaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 15034818 - 15034783
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaat 15034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 24273293 - 24273258
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaat 24273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 30190295 - 30190260
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaat 30190260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 40264151 - 40264068
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||  | ||| ||||| |||| |    | ||||||| ||||||||||||||||||||||||||||||    
T  40264151 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 31166302 - 31166340
Alignment:
Q  119 acaccttaagagtgtgtttggatgggggaatgttttgag 157  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31166302 acaccttaagagtgtgtttggatgagggaatgttttgag 31166340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 32647374 - 32647300
Alignment:
Q  195 attcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactcta 269  Q
    ||||||| ||||||| ||||||| |||||||||| || ||| | ||||||||||| ||| |||||| ||||||||    
T  32647374 attcaccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcctccgtccaaatacactcta 32647300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 47165247 - 47165201
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||||    
T  47165247 aatgttttgagggaattcaaatactttaaggtgaattccattgtttg 47165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 8224766 - 8224803
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8224766 taagagtgtgtttggatgagggaatgttttgagggaat 8224803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 15245517 - 15245480
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15245517 gaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 26501154 - 26501117
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaat 26501117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 43623053 - 43623016
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||||||| |||||    
T  43623053 taagagtgtgtttggatgggggaatgttttgatggaat 43623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 44571225 - 44571285
Alignment:
Q  132 gtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||| ||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  44571225 gtgtttggatgggg-aatgttttgagggaattcaaatactttgaagtgaattccattgtttg 44571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 946988 - 946932
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    |||||||||||| |||| ||||||| |||||||| | || |||||||||||||||||    
T  946988 gaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattc 946932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 37447900 - 37447956
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||| ||| ||||    
T  37447900 gaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattc 37447956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 946440 - 946374
Alignment:
Q  203 caaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| || ||||||||||||||| || ||||||||||| ||||  | ||||||||||||||||||    
T  946440 caaagtatttaaattccctcaaaacaatacattccctcaaagcatttct-catccaaacacactctaa 946374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 31166385 - 31166310
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| |||||| || ||| ||||| ||||||||||| |||  ||||||||||||   ||||||||||||||||    
T  31166385 gaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 31195531 - 31195468
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatc 256  Q
    |||||||||||||| || || |||| ||||| ||||||| |||||||||||| |||| ||||||    
T  31195531 gaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcctccatc 31195468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 32128083 - 32128040
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaaaagtct 276  Q
    |||||||||||||||||  ||||| |||||||||||||||||||    
T  32128083 attccctcaaaacattcccccatctaaacacactctaaaagtct 32128040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 39887202 - 39887127
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| |||||||| ||||||| | ||||||||| | ||||||| |||||||||   |||| |||||||||||    
T  39887202 gaattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacacactct 39887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 47074156 - 47074210
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattc 184  Q
    ||||||||||||| ||||||| |||||| |||||||||| ||||| ||||||||||    
T  47074156 agtgtgtttggat-ggggaatattttgaaggaattcaactactttgaggtgaattc 47074210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 29446788 - 29446828
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctatt 188  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  29446788 aatgttttgagggaattcaacta-tttaaggtgaattctatt 29446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 32128105 - 32128068
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  32128105 gaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 32572975 - 32572938
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaa 32572938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 37214903 - 37214939
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37214903 gaattcacctcaa-gtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 37214924 - 37214961
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  37214924 attccctcaaaacattctcccatccaaacacactctaa 37214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 41822563 - 41822596
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||||| ||||||||||||||    
T  41822563 attccctcaaaacattcattcatccaaacacact 41822596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 44571276 - 44571239
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  44571276 gaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 15467961 - 15468009
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||    
T  15467961 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 32288007 - 32287971
Alignment:
Q  126 aagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||| |||| |||||||||||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaat 32287971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 32652261 - 32652205
Alignment:
Q  213 gaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactcta 269  Q
    ||||| |||||||||| || ||| ||||||||||||  |||||||||| ||||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaatacactcta 32652205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 52135674 - 52135614
Alignment:
Q  133 tgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||| | ||||||||||||||||||||  | ||| |||| |||| |||||||||    
T  52135674 tgtttggatggagaaatgttttgagggaattcaaatatttttaggtaaattttattgtttg 52135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 44692860 - 44692981
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44692860 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 44692959  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||| ||||||||||||||||||    
T  44692960 ttcctccatccaaacacactct 44692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 27251916 - 27252053
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27251916 tgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 27252015  T
Q  231 agattccctcaaaacattcatccatccaaacacactct 268  Q
    | ||||||||||||||| |  |||||||||||||||||    
T  27252016 acattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 46429414 - 46429557
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||    
T  46429414 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaa 46429513  T
Q  227 cattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| ||| |||||||| ||||   ||||||||||||||||||    
T  46429514 cattacattacctcaaaatattccctcatccaaacacactctaa 46429557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 9129382 - 9129503
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9129382 aatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9129481  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||   ||||||||||||||||    
T  9129482 ttccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 9137489 - 9137610
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9137489 aatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9137588  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||   ||||||||||||||||    
T  9137589 ttccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 28092357 - 28092212
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    |||||||||||||  ||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28092357 taagagtgtgtttaaatgggggaatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaa 28092258  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| | ||| |||||||||||||  ||||||||||| |||||||    
T  28092257 aacatcacatttcctcaaaacattcccccatccaaacatactctaa 28092212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 332122 - 332012
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattg-tttgaattcacctcaaagtagttgaattcc 219  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  332122 accttaagagtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattcc 332023  T
Q  220 ctcaaaacatt 230  Q
    |||||||||||    
T  332022 ctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 5415904 - 5415783
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||||||||||| |    
T  5415904 aatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagtagttgaattccctcaaaacattacattccctcaaaata 5415805  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  | |||||||||||||||    
T  5415804 ttcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 25655440 - 25655335
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  25655440 taagagtgtgtttggatggggaaatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaa 25655341  T
Q  225 aacatt 230  Q
    ||||||    
T  25655340 aacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 44436296 - 44436380
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatta 231  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44436296 aatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatta 44436380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 31070444 - 31070567
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |    
T  31070444 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 31070543  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  | || |||||| |||||||    
T  31070544 ttctccaattcaaacatactctaa 31070567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 46672770 - 46672881
Alignment:
Q  157 gggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatc 256  Q
    ||||||||||| ||||| |||||||||| |      ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||    
T  46672770 gggaattcaactactttgaggtgaattcaa------gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatc 46672863  T
Q  257 caaacacactctaaaagt 274  Q
    ||||||||||||||||||    
T  46672864 caaacacactctaaaagt 46672881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 39110491 - 39110392
Alignment:
Q  171 tttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| |||||||||||  | ||||||||||||||||||    
T  39110491 tttaatgtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactctaa 39110392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 44692943 - 44692820
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | |||||||||| ||||| ||||||||||||||||||||||  |||||||||||||    
T  44692943 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaaca 44692844  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  44692843 ttcccccatccaaacacactctaa 44692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 151 - 270
Target Start/End: Original strand, 47284268 - 47284387
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||  |||||||| || ||||||||||||||||||||| ||| |||||||| ||||     
T  47284268 ttttgagggaattcagctactttgaggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattct 47284367  T
Q  251 tccatccaaacacactctaa 270  Q
      ||||||||||||||||||    
T  47284368 ctcatccaaacacactctaa 47284387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 44436404 - 44436258
Alignment:
Q  127 agagtgtgtttggatgggggaatgt-----tttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccct 221  Q
    ||||||||||||||||||| |||||     |||||||||||||||| ||||| |||||||||| |    | |||||||||| ||| |||||||||| |||    
T  44436404 agagtgtgtttggatggggaaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcct 44436305  T
Q  222 caaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||    
T  44436304 caaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 39215855 - 39215995
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||| ||| |||| |||||||||||  ||||| ||||||||| |||||||||||| ||||||||| || |||||||  |||||    
T  39215855 taagagtgtgtttggatgggg-aatatttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaa 39215953  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||| ||| |||||||| ||||   ||||||||||||||    
T  39215954 aacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 5415821 - 5415942
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| |||||||||||| | | |    | |||||||||| |||||||||||||||| |||||||||||  ||||||||||| |    
T  5415821 aatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaata 5415920  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  5415921 ttcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 9129465 - 9129344
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | ||||||| || |||||||||||||||| ||||||||||| |||||||||||| |    
T  9129465 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaata 9129366  T
Q  247 ttcatccatccaaacacactct 268  Q
     ||  |||||||||||||||||    
T  9129365 gtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 9137572 - 9137451
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | ||||||| || |||||||||||||||| ||||||||||| |||||||||||| |    
T  9137572 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaata 9137473  T
Q  247 ttcatccatccaaacacactct 268  Q
     ||  |||||||||||||||||    
T  9137472 gtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 25655315 - 25655418
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||| | |  | ||||||| || |||||||||||||||| ||||||    
T  25655315 agagtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaa 25655414  T
Q  227 catt 230  Q
    ||||    
T  25655415 catt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 49457418 - 49457343
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  49457418 gaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 31070527 - 31070425
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31070527 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 31070428  T
Q  247 ttc 249  Q
    |||    
T  31070427 ttc 31070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 36397986 - 36398063
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 36398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 48947680 - 48947603
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  48947680 gaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactctaa 48947603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 47767506 - 47767430
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  47767506 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 47767430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 21307529 - 21307600
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||  |||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 34088646 - 34088571
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 331993 - 332096
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattc-tattgtttgaattcacctcaaagtagttgaattccctcaaa 225  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||  |    | |||||||||| ||||||||||||||||||||||    
T  331993 agagtgtgtttggatggag-aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaa 332091  T
Q  226 acatt 230  Q
    |||||    
T  332092 acatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 37054468 - 37054392
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||||||    
T  37054468 aattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactctaa 37054392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 53470427 - 53470503
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    ||||||||||||||||||    
T  53470427 aattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactctaa 53470503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 19475891 - 19475824
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaa 260  Q
    ||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||| ||||||||||    
T  19475891 gaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 42005951 - 42006025
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||| ||| || |||||| ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  42005951 aattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 42006025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 2104749 - 2104818
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||| ||||||||||| ||||||||||||  ||||| | |||||||||||||||||    
T  2104749 ttaagagtgtgtttggataggggaatgtttcgagggaattcaaatactttgatgtgaattctattgtttg 2104818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 31189395 - 31189480
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaagtctaaa 279  Q
    |||| ||||||||||| |||||||| |||||||||||| ||| |||||||||||||   ||| ||||||||||||||||| |||||    
T  31189395 aatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactctaaaagactaaa 31189480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 37321625 - 37321546
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||||| |||||||||||||| |||||||||||||  || |||||||| ||||  ||||||||| |||||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactctaaaa 37321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 53129840 - 53129915
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| ||||||||||| ||||||||| |||||||| ||||||||   ||||||||||||||||    
T  53129840 gaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 9007513 - 9007443
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  ||||| |||||||||  ||||||||    
T  9007513 cttaagagtgtgtttggatgggggaatgttttgaacgaattcaaatacttttaggtgaatttcattgtttg 9007443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 27485468 - 27485518
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccacttt 173  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  27485468 cttaaaagtgtgtttggatgggggaatgttttgagggaattcaactacttt 27485518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 46672837 - 46672770
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccc 220  Q
    ||||||||||||||||||||| ||||| ||||||||||      ||||||||||||||||||||||||||||||    
T  46672837 aatgttttgagggaattcaactactttgaggtgaattc------ttgaattcacctcaaagtagttgaattccc 46672770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 49457381 - 49457423
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49457381 aatgttttgagggaattcaaccactttaaggtgaattctattg 49457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 38506934 - 38506861
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||| |||||||||||||| | ||||||||||||||||||||||  | ||| |||||||||| |||||||||||    
T  38506934 cttatgagtgtgtttggatagaggaatgttttgagggaattcaaataatttgaggtgaattccattgtttgaat 38506861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 30766628 - 30766572
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||    
T  30766628 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattc 30766572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 54761620 - 54761552
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||| | || ||||| ||||||||    
T  54761620 taagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgatgtaaattccattgtttg 54761552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 671616 - 671691
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| |||||||  ||||||||||||||||| || |||||||||||||||||  | ||||||| |||||||    
T  671616 gaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactct 671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 7302421 - 7302346
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||| |||  |||||||| ||||||||||| |||| ||||||||||||   ||||||||||||||||    
T  7302421 gaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 27252015 - 27251932
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | ||||||| || |||||||||||||||||| ||||||||    
T  27252015 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 37321662 - 37321619
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaattca 165  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  37321662 ccttaagagtgtgtttggattggggaatgttttgagggaattca 37321619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 42130809 - 42130694
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    |||| |||||||||||  ||||| |||||||||||| | ||||||| ||| | ||  || ||||||||||||||||||||| ||  |||||||| ||||     
T  42130809 tttttagggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctcaaaatattcc 42130710  T
Q  251 tccatccaaacacact 266  Q
     ||| |||||||||||    
T  42130709 cccacccaaacacact 42130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 28092253 - 28092335
Alignment:
Q  148 atgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||  ||||| |||||||||| |    | ||||||||||||||  ||||||||||||||||||||||    
T  28092253 atgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  204 aaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaaca 262  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||| ||||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 30767167 - 30767102
Alignment:
Q  205 aagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||   ||||||||| |||||||||    
T  30767167 aagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaatacactctaa 30767102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 42006027 - 42005990
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42006027 taagagtgtgtttggatgggggaatgttttgagggaat 42005990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 44436256 - 44436293
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44436256 taagagtgtgtttggatgggggaatgttttgagggaat 44436293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 47284257 - 47284188
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||||||||||||||| |||||| ||||||||||||||||  ||||| |  ||||||| |||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagggaattcaaatactttgatatgaattccattgtttgaat 47284188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 49457341 - 49457378
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49457341 taagagtgtgtttggatgggggaatgttttgagggaat 49457378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 36398061 - 36398026
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaat 36398026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 46672875 - 46672840
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaat 46672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 47767432 - 47767467
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaat 47767467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 9129506 - 9129468
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9129506 ttaagagtgtgtttggatgagggaatgttttgagggaat 9129468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 9137613 - 9137575
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9137613 ttaagagtgtgtttggatgagggaatgttttgagggaat 9137575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  214 aattccctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 27252055 - 27252018
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27252055 taagagtgtgtttggatggggggatgttttgagggaat 27252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 35279976 - 35279939
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  35279976 taagaatgtgtttggatgggggaatgttttgagggaat 35279939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 46429471 - 46429434
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||| |||||||||||||||||||||||||||    
T  46429471 gaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 7976623 - 7976567
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    ||||||||||||| ||| || |||||| ||||||||||| ||||| |||||||||||    
T  7976623 gaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattc 7976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 46001420 - 46001364
Alignment:
Q  212 tgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||| |||||||| ||| |||||||| ||||  |||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 46635926 - 46635854
Alignment:
Q  199 acctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||| |||||| ||||||| ||||||||||||| |||  |||||||||||    |||||||||||||||||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactctaaa 46635854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 47714322 - 47714286
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactcta 269  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47714322 attccctcaaaacattcatccatccaagcacactcta 47714286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 52527111 - 52527039
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    ||||| ||||||||||| |||||||||  || ||||||| || || |||||||||||  ||||||||||||||    
T  52527111 gaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 332081 - 332116
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  332081 attccctcaaaacattcttccatccaaacacactct 332116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 37054394 - 37054429
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||| |||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaat 37054429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 54761583 - 54761618
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  54761583 attccctcaaaacattcctccatccaaacacactct 54761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 55460354 - 55460397
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    
T  55460354 cttaagagcgtgtttggatgtaggaatgttttgagggaattcaa 55460397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 7302343 - 7302381
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  7302343 ttaagagtgtgtttggatgagggaatgttttgagagaat 7302381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 13176596 - 13176550
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||||||    
T  13176596 aatgttttgagggaattcaaagacttttaggtggattctattgtttg 13176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 21307566 - 21307520
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  21307566 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 21307520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 27485522 - 27485492
Alignment:
Q  200 cctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||||||||||||||    
T  27485522 cctcaaagtagttgaattccctcaaaacatt 27485492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 40929658 - 40929704
Alignment:
Q  160 aattcaaccactttaaggtgaattctattgtttgaattcacctcaaa 206  Q
    |||||||| | |||||  |||||||||||||||||||||||||||||    
T  40929658 aattcaactattttaatatgaattctattgtttgaattcacctcaaa 40929704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 671693 - 671656
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  671693 taagagtgtttttggataggggaatgttttgagggaat 671656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 34088569 - 34088606
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  34088569 taagagtgtgtttggatggagaaatgttttgagggaat 34088606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 37321588 - 37321625
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattc 184  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  37321588 aatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 38506873 - 38506910
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||| || ||||||||||||||||||||    
T  38506873 gaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 42130776 - 42130821
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccc 238  Q
    ||||||||||||||||| ||||||||||| |||| |||| ||||||    
T  42130776 gaattcacctcaaagtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 46429449 - 46429412
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  46429449 attccctcaaaacattcccccatccaaacacactctaa 46429412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 47284301 - 47284268
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaa 226  Q
    |||||||||||||||||| |||||||||||||||    
T  47284301 gaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 53129917 - 53129880
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  53129917 taagagtgtgtttggatgagggaatgtttcgagggaat 53129880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 2732683 - 2732635
Alignment:
Q  224 aaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||| ||| ||||||||||||   |||||||||||||||||||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacactctaaaa 2732635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 19475971 - 19475923
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaa 242  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 106)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 15374081 - 15373958
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  15374081 aatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaa 15373982  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||| ||||||||||||||||||||    
T  15373981 ttcttccatccaaacacactctaa 15373958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 9764376 - 9764499
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  9764376 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcgaaaca 9764475  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  9764476 ttcccccatccaaacacactctaa 9764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 20523254 - 20523131
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  20523254 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaaca 20523155  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  20523154 ttctcccatccaaacacactctaa 20523131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 2316420 - 2316540
Alignment:
Q  151 ttttgagggaattcaaccactttaa-ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||     
T  2316420 ttttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt- 2316518  T
Q  250 atccatccaaacacactctaaa 271  Q
     |||||||||||||||||||||    
T  2316519 ttccatccaaacacactctaaa 2316540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 32390014 - 32390131
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||     
T  32390014 ttttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattct 32390113  T
Q  251 tccatccaaacacactct 268  Q
       |||||||||||||||    
T  32390114 ctaatccaaacacactct 32390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 40809462 - 40809341
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  40809462 aatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaaca 40809363  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||   |||||||||||||||||    
T  40809362 tttccccatccaaacacactct 40809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 15373998 - 15374119
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |    | |||||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  15373998 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaaca 15374097  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  15374098 ttcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 23092000 - 23092121
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| |||||||| ||||||||||| | |||||||| || |||||||||||| ||||||||||||||| ||||  ||||||||    
T  23092000 aatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaaca 23092099  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  23092100 ttcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 32470920 - 32471041
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |      
T  32470920 aatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaagatt 32471019  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    | ||  ||||||||||||||||||    
T  32471020 tcca--catccaaacacactctaa 32471041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 16515099 - 16515009
Alignment:
Q  173 taaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  16515099 taaggtgaattctattgttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattc-tccatccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 268
Target Start/End: Original strand, 40643838 - 40643976
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaaca 228  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| || | ||||| |    | |||||||||| ||| |||||||||||||||||||||    
T  40643838 agtgtgtttggatggagaaatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaaca 40643936  T
Q  229 ttagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||| |||||||||||||||||  |||||||||||||||||    
T  40643937 ttacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 34982348 - 34982216
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |        |||||||| ||||| |||||||||||||||||    
T  34982348 agagtgtgtttggatggaggaatgttttgagggaattcaaccactttaaggtgaa-tcaa-------gattcaccttaaagtggttgaattccctcaaaa 34982257  T
Q  227 cattagattccctcaaaacattcatccatccaaacacactct 268  Q
    || || |||||||||||||||||  | |||||||||||||||    
T  34982256 ca-tacattccctcaaaacattcccctatccaaacacactct 34982216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 40643938 - 40643856
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  40643938 aatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaaagtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 9764459 - 9764338
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||| ||| |    | |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |    
T  9764459 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaata 9764360  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  9764359 ttcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 20523178 - 20523291
Alignment:
Q  154 tgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatcc 253  Q
    |||||||||||||| ||||| |||||||||| |    | |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||  ||    
T  20523178 tgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattccccc 20523277  T
Q  254 atccaaacacactc 267  Q
    ||||||||||||||    
T  20523278 atccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 26281264 - 26281345
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaagt 274  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactctaaaagt 26281345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 28828369 - 28828504
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaaca 228  Q
    ||||||||||||||||||||||||||||||||||  ||    ||| ||| |||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgt-tttgagg-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaaca 28828466  T
Q  229 ttagattccctcaaaacattcatccatccaaacacact 266  Q
    ||| ||| |||||||| |||   |||||||||||||||    
T  28828467 ttacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 2721557 - 2721628
Alignment:
Q  195 attcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 32390093 - 32389974
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||| | |  | |||||||||| | ||||||||||||||||||||| |||| ||||| ||||||||    
T  32390093 aatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaaca 32389994  T
Q  247 ttcatccatccaaacacact 266  Q
    |||   ||||||||||||||    
T  32389993 ttccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 2316500 - 2316378
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctc-aaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||| ||||||||| ||||| |||||||||| |    | ||||||||||  ||||||||||||||||||||||| |||| |||||||||||||    
T  2316500 aatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaac 2316401  T
Q  246 attcatccatccaaacacactct 268  Q
    ||||  |||||||||||||||||    
T  2316400 attcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 15804400 - 15804322
Alignment:
Q  190 tttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 22767027 - 22766949
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactctaaa 22766949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 37722889 - 37722975
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaagtctaaa 279  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||  |||||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaagggtctaaa 37722975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 32471003 - 32470882
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||| | |  | ||||| |||| ||| |||||||||||| ||||||||||| ||||||||||||||    
T  32471003 aatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaaca 32470904  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||  |||||||||| |||||||    
T  32470903 tttctccatccaaatacactct 32470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 19533903 - 19533975
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  19533903 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 22305110 - 22305178
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  22305110 taagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattccattgtttg 22305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 3563352 - 3563278
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 6634120 - 6634015
Alignment:
Q  162 ttcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaac 261  Q
    |||||| ||||| |||||||||||||||||||||||||| || || || ||||||||||||||||||||| ||| |||||||| || |  ||||||||||    
T  6634120 ttcaactactttgaggtgaattctattgtttgaattcac-tcgaaataattgaattccctcaaaacattacattacctcaaaatatccccccatccaaac 6634022  T
Q  262 acactct 268  Q
    |||||||    
T  6634021 acactct 6634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 15270909 - 15270837
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||| |||||||||||    
T  15270909 ttaagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 15270837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 22303866 - 22303942
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  22303866 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 22303942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 16515102 - 16515177
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||   ||||||||||||||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactct 16515177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 25935285 - 25935360
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 40090409 - 40090484
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||  |||||||||||||||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 2550326 - 2550384
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaatt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  2550326 taagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 33146191 - 33146257
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  33146191 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 33146257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 927377 - 927302
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 40809379 - 40809502
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||| |    |  ||||||||| ||||||| ||||||| |||||||||||| |||| |||||||||    
T  40809379 aatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaaca 40809478  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||   ||||| |||||||||||||    
T  40809479 tttccccatctaaacacactctaa 40809502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 41762210 - 41762285
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 37145497 - 37145569
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||  |||||||||| ||||    
T  37145497 aattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 9894317 - 9894388
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||||||||||||||| |||||||||||   ||||||| |||||||||||||||||  |||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 23092083 - 23091961
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||||| |||||| ||||| || |||||||      | ||||||| || |||||||||||||||| ||||||||||| |||||||||||| |    
T  23092083 aatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaata 23091984  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  ||||| |||||||||||||    
T  23091983 ttc-cccatcaaaacacactctaa 23091961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 32250093 - 32250167
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| ||||| ||| |||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||    
T  32250093 gaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattc-cccatccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 3563315 - 3563365
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaatt 197  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  3563315 aatgttttgagggaattcaactactttaaggtgaattctattgcttgaatt 3563365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 33245367 - 33245441
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    ||||||| || ||||||||||||||  |||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  33245367 gaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 17542405 - 17542344
Alignment:
Q  135 tttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||||||||| |||||||||||||||||||||  ||||| |||||||||| |||||||||||    
T  17542405 tttggatgggagaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 17542344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 20320643 - 20320716
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||  ||||||| ||||||||||| |||| |||| ||||| ||||||||||||| ||||||||||||||    
T  20320643 gaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacacact 20320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  213 gaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 14834898 - 14834826
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||| ||||||||  |||| ||||||||||    
T  14834898 aattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 28489478 - 28489546
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||  ||||| |||||||||| |||||||    
T  28489478 ttaagattgtgtttggatgggggaatattttgagagaattcaaatactttgaggtgaattccattgttt 28489546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 28490013 - 28490076
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||| ||||||||    
T  28490013 agtgtgtttggatggggga-tgttttgagggaattcaaatactttgaggtgaattccattgtttg 28490076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 35379417 - 35379342
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| |||||| | ||||||||||||||||||||| |||  ||||||||||||  |||||||||||||||||||    
T  35379417 aattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattc-cccatccaaacacactctaa 35379342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 33146061 - 33146100
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33146061 agagtgtgtttggatgggggaatgttttgagggaattcaa 33146100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 22766990 - 22767036
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  22766990 aatgttttgagggaattcaaatactttaaggtgaattctattgtttg 22767036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 11601113 - 11601037
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||||||| || ||||||||| ||||||||||| ||| ||| |||| |||||| ||| |||||||||||||||    
T  11601113 aattcacctcaaattatttgaattccttcaaaacattatattaccttaaaatattcat-cattcaaacacactctaaa 11601037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 12064519 - 12064454
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||| ||||||||||||||||||||||||| ||  ||||| |||||||||  ||||||||    
T  12064519 gagtgtgttttgatgggggaatgttttgagggaatttaaatactttgaggtgaatttcattgtttg 12064454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 15374121 - 15374084
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaat 15374084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 22305169 - 22305132
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22305169 gaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 25935362 - 25935325
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25935362 taagagtgtgtttggatgggggaatgttttgagggaat 25935325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 40643978 - 40643941
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40643978 taagagtgtgtttggatgggggaatgttttgagggaat 40643941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 41762287 - 41762250
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41762287 taagagtgtgtttggatgggggaatgttttgagggaat 41762250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  214 aattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 34982254 - 34982328
Alignment:
Q  148 atgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||||||||||||||||   | |||     |||||||| ||||| |||||||||||||||||||||    
T  34982254 atgttttgagggaattcaaccactttaaggtgaa---tcttg-----attcaccttaaagtggttgaattccctcaaaacatt 34982328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 15804322 - 15804357
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaat 15804357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 22302539 - 22302578
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22302539 agagtgtgtttggatggggtaatgttttgagggaattcaa 22302578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 22303940 - 22303905
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaat 22303905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 22766952 - 22766987
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaat 22766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 26281301 - 26281262
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattcta 186  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  26281301 aatgttttgagggaattcaactactttaaggtgaattcta 26281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 927300 - 927337
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  927300 taagagtgtgtttggatggggaaatgttttgagggaat 927337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 2721628 - 2721595
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaat 2721595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 5658821 - 5658776
Alignment:
Q  223 aaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactct 5658776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 6634098 - 6634175
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||||||||| ||| | |||| |||| |||||||| |||  |||  |||||||||||||| ||||    
T  6634098 gaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacaccctaa 6634175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 15270849 - 15270886
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  15270849 gaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 17542356 - 17542393
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17542356 gaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 33146248 - 33146211
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33146248 gaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 34982214 - 34982251
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34982214 taagagtgtgtttggataggggaatgttttgagggaat 34982251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 34982313 - 34982350
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactctaa 34982350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 40090486 - 40090453
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagg 158  Q
    ||||||||||||||||||||||||||||||||||    
T  40090486 taagagtgtgtttggatgggggaatgttttgagg 40090453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 13243514 - 13243478
Alignment:
Q  213 gaattccctcaaaacattagattccctcaaaacattc 249  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattc 13243478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 28490067 - 28490031
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacat 229  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28490067 gaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 162
Target Start/End: Complemental strand, 9894388 - 9894357
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaat 9894357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 10314724 - 10314649
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| ||||| || ||||||||||| |||| |||| ||| | ||||||||||  |||||||||||| |||||    
T  10314724 gaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactct 10314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 15270871 - 15270906
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15270871 attccctcaaaacattcctccatccaaacacactct 15270906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 156
Target Start/End: Complemental strand, 23092123 - 23092092
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttga 156  Q
    ||||||||||||||||||||||||||||||||    
T  23092123 taagagtgtgtttggatgggggaatgttttga 23092092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 26281339 - 26281304
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||| |||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaat 26281304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 37722964 - 37722929
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaat 37722929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 3563278 - 3563312
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaat 3563312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 33245441 - 33245407
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||| |||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaat 33245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 34105089 - 34105155
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||| |||||||||||||  |||||||  ||||| || ||||||  ||||||||    
T  34105089 agagtgtgtttggatggaggaatgttttgagaaaattcaaatactttgagatgaatttcattgtttg 34105155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 37090356 - 37090282
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    |||||||| | ||| || ||||||| |||||||||||   ||| ||||||||||||| || ||||||||||||||    
T  37090356 gaattcacataaaaatatttgaatttcctcaaaacatcgcattacctcaaaacattcttctatccaaacacactc 37090282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 37145574 - 37145536
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  37145574 ttaaaagtgggtttggatgggggaatgttttgagggaat 37145536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattc 236  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 37722926 - 37722880
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  37722926 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 37722880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 40809330 - 40809376
Alignment:
Q  116 acaacaccttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||    
T  40809330 acaactccctaagagtgtgtttggatggggaaatgttttgagagaat 40809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 5658774 - 5658811
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  5658774 taagagtgtgtttggatggagaaatgttttgagggaat 5658811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 15804451 - 15804418
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaat 15804418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 19533975 - 19533942
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||| ||||||||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaat 19533942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 20523291 - 20523262
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgag 157  Q
    ||||||||||||||||||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgag 20523262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 33146096 - 33146059
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  33146096 attccctcaaaacattcccccatccaaacacactctaa 33146059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 33146226 - 33146189
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  33146226 attccctcaaaacattcccccatccaaacacactctaa 33146189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 34105119 - 34105086
Alignment:
Q  238 ctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||||| |||||||||||||||||||||    
T  34105119 ctcaaaacattcctccatccaaacacactctaaa 34105086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 12064464 - 12064500
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| || |||||||||||||||||    
T  12064464 aattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 13243514 - 13243566
Alignment:
Q  219 cctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||||||| ||| |||||||| ||||  ||||||||||||||| ||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacactataaa 13243566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 17492643 - 17492679
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacat 229  Q
    |||||||||||||| || |||||||||||||||||||    
T  17492643 gaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 31367932 - 31367972
Alignment:
Q  153 ttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||| |||||| || ||||||||||||||||    
T  31367932 ttgagggaattcaaacactttgagatgaattctattgtttg 31367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 32250169 - 32250134
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaa 161  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32250169 taagagtgtgtttggat-ggggaatgttttgagggaa 32250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 127 - 268
Target Start/End: Original strand, 40853987 - 40854129
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaatt-ccctcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  40853987 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaa 40854086  T
Q  226 acattagattccctcaaaacattcatccatccaaacacactct 268  Q
    | |||| ||||||||| ||||||   |||||||||||||||||    
T  40854087 atattacattccctcagaacatttccccatccaaacacactct 40854129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 29065857 - 29065983
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||| ||| ||||||    
T  29065857 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaaca 29065956  T
Q  247 ttcatccatccaaacacactctaaaag 273  Q
    ||| |||||||||||||||||||||||    
T  29065957 ttcctccatccaaacacactctaaaag 29065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 40110775 - 40110897
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgttt-gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  40110775 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaac 40110874  T
Q  246 attcatccatccaaacacactct 268  Q
    |||   |||||||||||||||||    
T  40110875 atttccccatccaaacacactct 40110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 2057516 - 2057395
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  2057516 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaaca 2057417  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  2057416 ttcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 128 - 268
Target Start/End: Complemental strand, 44915340 - 44915195
Alignment:
Q  128 gagtgtgtttggatggggg-----aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctc 222  Q
    ||||||||| |||||||||     ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44915340 gagtgtgttaggatgggggaatttaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttc 44915241  T
Q  223 aaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||  ||||||||||| ||||   ||||||||||||||||    
T  44915240 aaaacattacgttccctcaaaaaattctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 49052906 - 49052786
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||    
T  49052906 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaaca 49052808  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||    ||||||||||||||||    
T  49052807 ttttctcatccaaacacactct 49052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 5644715 - 5644838
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| || ||||||||||||||||||||| ||| |||||||||     
T  5644715 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaacattacattacctcaaaacg 5644814  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  5644815 ttcccccatccaaacacactctaa 5644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 34388303 - 34388426
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||| |||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  34388303 aatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagtagttgaattccctcaaaatattacattccctcaaaaca 34388402  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||   ||| ||||||||||||||    
T  34388403 ttccatcattcaaacacactctaa 34388426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 43955555 - 43955676
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| |||||||| |||||||||||    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  43955555 aatgttttgagggaattcaactactttaagatgaattctatta---gaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 43955651  T
Q  247 ttcatccatccaaacacactctaaa 271  Q
    |||  ||||||||||||||| ||||    
T  43955652 ttcccccatccaaacacactataaa 43955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 29065940 - 29065819
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29065940 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 29065841  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||||||||||||||||||||||    
T  29065840 ttcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 43955635 - 43955517
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||| |||||| |    ||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  43955635 aatgttttgagggaattcaactactttaaggtgcattctaata---gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaaca 43955539  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  43955538 ttcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 40110859 - 40110737
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgttt-gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaac 245  Q
    ||||||||||||||||||||| ||||| |||||||||| |     | |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  40110859 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaac 40110760  T
Q  246 attcatccatccaaacacactct 268  Q
    ||||  |||||||||||||||||    
T  40110759 attcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 5644752 - 5644677
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  5644752 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 5644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 46069402 - 46069545
Alignment:
Q  125 taagagtgtgtttggatgggggaatg-----ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattcc 219  Q
    ||||||||||||||||||||||||||     ||||||||||||||||| ||||| |||||||||||||||||||||| || |||||| || |||||||||    
T  46069402 taagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattcc 46069501  T
Q  220 ctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||  ||||||| ||| |||| ||| ||||  |||||||||||||||    
T  46069502 ctc--aacattacattacctc-aaatattcccccatccaaacacact 46069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 21636006 - 21635885
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||| ||| ||||| || ||||||||||||||||||| ||||||||| || |||||| |||||||||||||| ||| |||||||| |    
T  21636006 aatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaata 21635907  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||| ||||||||    
T  21635906 ttctcccatccaagcacactct 21635885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 31913232 - 31913315
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtg-aattctattgtttgaattcacctcaaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||    
T  31913232 cttaagagtgtgtttggatgggggaatgttttgagggaattcaacta-tttaaggtgaaattctattgtttgaatttacctcaaa 31913315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 6498751 - 6498826
Alignment:
Q  195 attcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  6498751 attcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaa 6498826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 26162121 - 26162198
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 26162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 2057433 - 2057556
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||| ||| |    |  |||||||||  |||||||||||||||||||||||||||  ||||||||||| |    
T  2057433 aatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaata 2057532  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    |||  |||||||||||||||||||    
T  2057533 ttcccccatccaaacacactctaa 2057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 31632797 - 31632722
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 46481984 - 46482106
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||| |||| ||| | || ||| |||||||||||||||||||||| |||||| ||||||||||  |||||||||||| ||||| |||| |||    
T  46481984 aatgttttgaggaaatttaactatttgaagatgaattctattgtttgaattcaactcaaa-tagttgaattttctcaaaacattacattccttcaacaca 46482082  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||  ||||| ||||||||||||||    
T  46482083 tttctccattcaaacacactctaa 46482106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 23548595 - 23548673
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||| ||||||| ||||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  23548595 gaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactctaaa 23548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 28539152 - 28539229
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 28539229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 34398938 - 34399010
Alignment:
Q  199 acctcaaagtagttgaattc-cctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 34399010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 9784918 - 9784989
Alignment:
Q  196 ttcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    |||||| ||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  9784918 ttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 35776939 - 35777014
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactct 35777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 30587943 - 30587878
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  30587943 gagtgtgtttggatgggggaatgttttgagggaattcaaatactttaatgtgaattccattgtttg 30587878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 18789230 - 18789306
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactcta 269  Q
    |||||||||| |||||| ||||||||||||| ||||||| |||| ||||||| |||| |||||||||||||||||||    
T  18789230 gaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactcta 18789306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 39342626 - 39342701
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 35455879 - 35455801
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||| ||| ||||||| ||||||||||| |||||| || |||||||||||||||||  ||||||||||||||||||||    
T  35455879 gaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaaa 35455801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 23455231 - 23455308
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||   |||||||||||| |||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacacattctaa 23455308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 30080844 - 30080776
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||||||||||||||||||||| |||| ||  ||||| |||||||||| ||||||||    
T  30080844 taagagtgtgtttggatgggggaatgttttgaggaaatttaaatactttcaggtgaattccattgtttg 30080776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 14603246 - 14603321
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| ||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||    
T  14603246 gaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 14603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 44915233 - 44915324
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccc 238  Q
    |||||||||| |||||||||| ||||| |||||||||| |    | |||||||||| | |||||||||||||||||||||||||| ||||||    
T  44915233 aatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 25189211 - 25189285
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| |||||||| ||||||||||||||||||||  ||| |||||||||||||   ||||||||||||||||    
T  25189211 aattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 30524329 - 30524255
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||| | ||||||| ||||||||||||||||||||| ||||| ||||||||||  |||||||| |||||||||    
T  30524329 aattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactct 30524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 32650591 - 32650657
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||| ||||| ||||||||||||||||||||||  ||||| ||||||||| |||||||||    
T  32650591 agagtgtgtttcgatggaggaatgttttgagggaattcaaatactttgaggtgaattttattgtttg 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 49052823 - 49052913
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattcc 237  Q
    ||||||||||| ||||||||| ||||| || ||||||| |    | |||||||||| |||||||||||||||||||||||||||| |||||    
T  49052823 aatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 49052913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 21635969 - 21636038
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaaca 262  Q
    ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||||   |||||||||||    
T  21635969 gaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 34388382 - 34388265
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    ||||||||||||||||| ||||| |||||| ||| |    | |||||||||| ||||||||||||||| |||| |||||||  || |||||||| |||      
T  34388382 ttttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttc 34388283  T
Q  251 tccatccaaacacactct 268  Q
     |||||||||||||||||    
T  34388282 cccatccaaacacactct 34388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 46069466 - 46069421
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccc 238  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  46069466 gaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 29639199 - 29639279
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaag 273  Q
    |||||||||||||| || ||||||| ||||| ||||||| ||||||| |||||||||  ||||||| ||||||||| ||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactcttaaag 29639279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 39342706 - 39342666
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39342706 ccttaagagtgtgtttggatgggggaatgttttgagggaat 39342666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 13815035 - 13814969
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||| | |||||||| ||| ||||    
T  13815035 agagtgtgtttggataggggaatgttttgagggaattcaaatactttgatgtgaattccattatttg 13814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 43791162 - 43791116
Alignment:
Q  196 ttcacctcaaagtagttgaattccctcaaaacattagattccctcaa 242  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  43791162 ttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 14603323 - 14603286
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14603323 taagagtgtgtttggatgggggaatgttttgagggaat 14603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 19865595 - 19865530
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    |||||||||||||||| ||||||||||||||| |||||||  ||||| |||||||||  |||||||    
T  19865595 agagtgtgtttggatgagggaatgttttgaggaaattcaaatactttgaggtgaatttcattgttt 19865530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 31632720 - 31632757
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31632720 taagagtgtgtttggatgggggaatgttttgagggaat 31632757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 14790134 - 14790197
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||| |||| ||||    
T  14790134 agtgtgtttggatgggg-aatgttttgagggaattcaaatactttgaggtgaattttattatttg 14790197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 26162196 - 26162161
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaat 26162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 28539227 - 28539192
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaat 28539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 34399008 - 34398973
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaat 34398973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 35455804 - 35455839
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaat 35455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 22391572 - 22391626
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacatt 248  Q
    ||||||||||||| || || ||||| |||||||||||| ||||||||||||||||    
T  22391572 aattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacatt 22391626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 30629131 - 30629061
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    |||||||| ||||||| || ||||| || |||||| || |||||||||||||||||  |||||||||||||    
T  30629131 aattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 3905643 - 3905716
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||| ||||||||| | |||||||||  || |||||||||||||  | ||||||| |||||    
T  3905643 gaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacattcgactatccaaagacact 3905716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 35777016 - 35776979
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35777016 taagagtgtgtttggatgagggaatgttttgagggaat 35776979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 40495248 - 40495314
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||| ||||  | ||||||||||||  ||||| | |||||||||||||||||    
T  40495248 taagagtgtgtttggatggggaaatg--tcgagggaattcaaatactttgatgtgaattctattgtttg 40495314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 40854044 - 40854007
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40854044 gaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 43955671 - 43955638
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaat 43955638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 14790187 - 14790151
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14790187 aattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 32650647 - 32650611
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32650647 aattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 6498824 - 6498789
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaat 6498789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 23455318 - 23455271
Alignment:
Q  115 aacaacaccttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  23455318 aacaacacccttagaatgtgtttggatgagggaatgttttgagggaat 23455271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 23548670 - 23548635
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaat 23548635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 25189289 - 25189254
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagg 158  Q
    |||||||||||||||||||| |||||||||||||||    
T  25189289 cttaagagtgtgtttggatgtgggaatgttttgagg 25189254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 29195756 - 29195709
Alignment:
Q  221 tcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||| ||| |||||||| |||| ||||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 30629061 - 30629092
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaat 30629092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 158
Target Start/End: Complemental strand, 31913340 - 31913309
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagg 158  Q
    ||||||||||||||||||||||||||||||||    
T  31913340 agagtgtgtttggatgggggaatgttttgagg 31913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 36328837 - 36328771
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactt--taaggtgaattctattgtttg 193  Q
    ||||||||||||||||| ||||||||||| ||||||||  ||||   ||||||||||||||| ||||    
T  36328837 agtgtgtttggatggggtaatgttttgagagaattcaaatacttaaaaaggtgaattctattatttg 36328771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 45984417 - 45984378
Alignment:
Q  191 ttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  45984417 ttgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 45988777 - 45988738
Alignment:
Q  191 ttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  45988777 ttgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 9784989 - 9784955
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| ||||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaat 9784955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 18789267 - 18789221
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||| |||||||||||||  |||||||||||||||| ||||||||    
T  18789267 aatgttatgagggaattcaaatactttaaggtgaattccattgtttg 18789221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 29639277 - 29639239
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  29639277 ttaagagtgtgtatggatgggggaatgttttcagggaat 29639239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 13814978 - 13815015
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  13814978 gaattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 31632760 - 31632809
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaat 196  Q
    |||||| |||||||||||||  ||||| |||||||||| |||||||||||    
T  31632760 aatgttatgagggaattcaaatactttgaggtgaattccattgtttgaat 31632809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 31913309 - 31913346
Alignment:
Q  237 cctcaaaacattcatccatccaaacacactctaaaagt 274  Q
    |||||||||||||  |||||||||||||||||||||||    
T  31913309 cctcaaaacattcccccatccaaacacactctaaaagt 31913346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 32650626 - 32650589
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  32650626 attccctcaaaacattcctccatcgaaacacactctaa 32650589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 40854022 - 40853985
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  40854022 attccctcaaaacattcccccatccaaacacactctaa 40853985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 40854131 - 40854094
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  40854131 taagagtgtgtttggatggggaaatgttctgagggaat 40854094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 45984359 - 45984424
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||    |||||||| |||||||||||  ||||| |||||||||| ||||||||    
T  45984359 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45984424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 45988719 - 45988784
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||    |||||||| |||||||||||  ||||| |||||||||| ||||||||    
T  45988719 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45988784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 18789592 - 18789544
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||| ||||    
T  18789592 gaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 19865539 - 19865575
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  19865539 aattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 31632876 - 31632828
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaa 242  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 40667359 - 40667395
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaatt 163  Q
    ||||||||||||||||||  |||||||||||||||||    
T  40667359 agagtgtgtttggatgggaaaatgttttgagggaatt 40667395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 857277 - 857400
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  857277 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 857376  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||   |||||||||||||||||||    
T  857377 tttccccatccaaacacactctaa 857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 28845909 - 28846032
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  28845909 aatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaaca 28846008  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||   |||||||||||||||||||    
T  28846009 tttccccatccaaacacactctaa 28846032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 129 - 270
Target Start/End: Complemental strand, 11041105 - 11040966
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaaca 228  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11041105 agtgtgtttggttgggg-aatgttttgagggaattcaactactttatggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaaca 11041007  T
Q  229 ttagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||| |||||||||||| ||||  |||||||||||||||||||    
T  11041006 ttacattccctcaaaatattc-cccatccaaacacactctaa 11040966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 41498532 - 41498649
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||| |||||||||||| ||||     
T  41498532 ttttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcc 41498631  T
Q  251 tccatccaaacacactct 268  Q
    ||||||||||||||||||    
T  41498632 tccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 26251050 - 26250911
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| || ||||||| ||||||||    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaa 26250951  T
Q  227 cattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||| ||| |||||||| ||||   ||||||||||||||    
T  26250950 cattacattacctcaaaatattccctcatccaaacacact 26250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 7352850 - 7352971
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  7352850 aatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaaca 7352949  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||   |||||||||||||||||    
T  7352950 tttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 14982422 - 14982278
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |   |   ||||||||| ||||||||| |||||||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattcaaaaataa-aattcaccttaaagtagttaaattccctcaa 14982324  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14982323 aacattacattccctcaaaacattcctccatccaaacacactctaa 14982278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 49111373 - 49111474
Alignment:
Q  170 ctttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactcta 269  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  49111373 ctttaaggggaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcta 49111472  T
Q  270 aa 271  Q
    ||    
T  49111473 aa 49111474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 1107173 - 1107076
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaa 244  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||    
T  1107173 aatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaa 1107076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 15660304 - 15660183
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| || |||||| || ||||||||||||||||||||| ||| |||||||| |    
T  15660304 aatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaataattgaattccctcaaaacattacattacctcaaaata 15660205  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  | |||||||||||||||    
T  15660204 ttcccctatccaaacacactct 15660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 10128095 - 10127976
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||| || ||||||||| ||||||||||| ||| | |||||| |    
T  10128095 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaata 10127996  T
Q  247 ttcatccatccaaacacact 266  Q
    |||  |||||||||||||||    
T  10127995 ttcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 36455982 - 36455905
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36455982 gaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactctaa 36455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 28845992 - 28845876
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||| |    | |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  28845992 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaaca 28845893  T
Q  247 ttcatccatccaaacac 263  Q
    ||| |||||||||||||    
T  28845892 ttcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 55266860 - 55266937
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  55266860 aattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactctaaa 55266937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 4441468 - 4441338
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaac 227  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| |    | ||||||||         ||||||||||||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac---------gttgaattccctcaaaac 4441378  T
Q  228 attagattccctcaaaacattcatccatccaaacacactc 267  Q
    |||| |||||||||||||||||  ||||||||||||||||    
T  4441377 attacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 14982318 - 14982396
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14982318 aatgttttgagggaatttaactactttaaggtgaattttatt-tttgaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 42844585 - 42844700
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattca 250  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||| ||| ||||| || |||| |||||||||||||||| ||| |||||||| |||      
T  42844585 ttttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttc 42844684  T
Q  251 tccatccaaacacact 266  Q
     |||||||||||||||    
T  42844685 cccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 36455945 - 36456085
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaag-------------------tagttgaattccctcaaaac 227  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||                   |||||||||| ||||||||     
T  36455945 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtatagaattcaccttaaagtagttgaatttcctcaaaat 36456044  T
Q  228 attagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  36456045 attacattccctcaaaacattcctccatccaaacacactct 36456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 12914139 - 12914054
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagtt 212  Q
    |||||||||||||||| |  ||||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||    
T  12914139 agagtgtgtttggatgagaaaatgttttgagggaattcaactattttaagatgaattttattgtttgaattcacctcaaagtagtt 12914054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 15660267 - 15660344
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||    
T  15660267 gaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctaa 15660344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 31473923 - 31473846
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||    
T  31473923 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaaa 31473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 1107090 - 1107214
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||| |||||||||| ||||| || ||||||| |    | |||||||||| | |||||||||||||||||||||||||| |||||||||||| |    
T  1107090 aatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaata 1107189  T
Q  247 ttcatccatccaaacacactctaaa 271  Q
    |||  ||||||||| ||||||||||    
T  1107190 ttcccccatccaaatacactctaaa 1107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 7352933 - 7352814
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |  ||||||| |    | |||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||    
T  7352933 aatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaaca 7352834  T
Q  247 ttcatccatccaaacacact 266  Q
    |||  |||||||||||||||    
T  7352833 ttcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 1112679 - 1112605
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||  |||||||||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 1539715 - 1539649
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaa 260  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1539715 aattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 467879 - 467962
Alignment:
Q  185 tattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  467879 tattgtttgaattcacttcaaagtggttgaatt-cctcaaaacattacattccatcaaaacattc-tccatccaaacacactctaa 467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 4896716 - 4896789
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||   |||||||||||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 4896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 10128058 - 10128135
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||||    
T  10128058 gaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactctaa 10128135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 10633106 - 10633035
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  10633106 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 857360 - 857266
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    ||||||||||||||||||||| ||||| || ||||||| |    | |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  857360 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 566687 - 566622
Alignment:
Q  440 ttgaattctctctctttagtctccaaacagtttctcttcatcacagaccgtcttcgattttcactt 505  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  566687 ttgaattctctctccttagtctccaaacagtttctctccatcaccgacagtcttcgattttcactt 566622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 2125932 - 2125855
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||  |||||||||||||||||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactctaa 2125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 4441396 - 4441449
Alignment:
Q  177 gtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4441396 gtgaattctattgtttgaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 42775625 - 42775689
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 42775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 11348327 - 11348398
Alignment:
Q  199 acctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||  ||||||||| |||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactctaa 11348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 42844618 - 42844543
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||  ||||| | |||||||||    
T  42844618 gaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactct 42844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 1112706 - 1112783
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||||||||||||||| |||||||| |||  |||||||||| |  ||||||||||| |||||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactctaa 1112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 16516243 - 16516166
Alignment:
Q  196 ttcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaag 273  Q
    ||||| |||||||| || |||||| ||||||||||| ||||| |||||||||||  ||||||||||||||||||||||    
T  16516243 ttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactctaaaag 16516166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 35470197 - 35470120
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||   ||||| |||||||||||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactctaa 35470120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 4896716 - 4896646
Alignment:
Q  200 cctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||| || ||||||||||||||||||||| ||| |||||||| ||||  |||||||||||||||||||    
T  4896716 cctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaa 4896646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 53760845 - 53760779
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||| | |||||||||||||||||    
T  53760845 agagtgtgtttgaatgggggaatgttttgagggaattcaaatattttgatgtgaattctattgtttg 53760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 31742874 - 31742923
Alignment:
Q  219 cctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 41498565 - 41498485
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaa-cattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||||| ||||| ||||||||||||||||| |||||  ||| ||||||||| ||  |||||||||||||||||||||    
T  41498565 gaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactctaaaa 41498485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 26250947 - 26251030
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||| |||||||  | ||| ||||| |||| | |  | ||||||||||||||||||||||||||||||||||||||    
T  26250947 aatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 42776711 - 42776637
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| |||||| |||||||  |||||||||||| ||  ||| ||||||||| ||||||||||||||||||    
T  42776711 aattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactct 42776637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 5715815 - 5715742
Alignment:
Q  197 tcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||| |||||||| ||||||| ||||||||||||| |||  ||||||||||||   ||||||||||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaa 5715742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 21012635 - 21012566
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgttt 192  Q
    |||||||||||||||||||||  |||||||||||||||||| ||  | ||| |||||||||| |||||||    
T  21012635 cttaagagtgtgtttggatggacgaatgttttgagggaatttaaatattttgaggtgaattccattgttt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 266
Target Start/End: Complemental strand, 31742924 - 31742778
Alignment:
Q  126 aagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattc-------acctcaaagtagttgaattc 218  Q
    |||||||||||||||||| ||||||||||||||||||  ||    ||| |||| |||| ||||||||||| |        |||||||| || ||||||||    
T  31742924 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgt-tttgaggtaaattttattgtttgaaatattacattacctcaaaataattgaattc 31742826  T
Q  219 cctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||||| | | ||| |||| |||| ||||||||||||||||    
T  31742825 cctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 36455907 - 36456007
Alignment:
Q  127 agagtgtgtttggatggggg------------------aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagt 208  Q
    ||||||||||||||||||||                  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagt 36456006  T
Q  209 a 209  Q
    |    
T  36456007 a 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctca 241  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 11041005 - 11041088
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||| ||||||||| ||||| |||||||| | |    | |||||||||  |||||||||||||||||||||||||||    
T  11041005 aatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 31473849 - 31473884
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaat 31473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 49111471 - 49111436
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaat 49111436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 56339146 - 56339217
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||  ||||| | |||||||  ||||||||    
T  56339146 cctttagagtgtgtttggatgatggaatgttttgagggaattcaaatactttgatgtgaatttcattgtttg 56339217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 17727091 - 17727149
Alignment:
Q  135 tttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||||||||  ||||||||    
T  17727091 tttggatgggggaatgttttgtgggaattcaaatactttgaggtgaatttcattgtttg 17727149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 32725003 - 32724961
Alignment:
Q  180 aattctattgtttgaattcacctcaaagtagttgaattccctc 222  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  32725003 aattctattgtttgaactcacctcaaagtaattgaattccctc 32724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 40338303 - 40338241
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||| ||||||||||||| |||||||||  ||||| |||||||||  ||||||||    
T  40338303 tgtgtttggatgagggaatgttttgatggaattcaaatactttgaggtgaatttcattgtttg 40338241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  180 aattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 1112603 - 1112636
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagg 158  Q
    ||||||||||||||||||||||||||||||||||    
T  1112603 taagagtgtgtttggatgggggaatgttttgagg 1112636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 7352814 - 7352847
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaat 7352847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 7352973 - 7352936
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  7352973 taagagtgtgtttggatggggaaatgttttgagggaat 7352936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 31947584 - 31947625
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31947584 accttaagagtatgtttggatgggagaatgttttgagggaat 31947625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 36456087 - 36456050
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36456087 taagagtgtgtttggatggaggaatgttttgagggaat 36456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  221 tcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 42775680 - 42775643
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  42775680 gaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 46243148 - 46243111
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaattcaa 46243111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 52295098 - 52295061
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  52295098 agtgtgtttggatgggggaatgtttcgagggaattcaa 52295061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 10633035 - 10633067
Alignment:
Q  130 gtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaat 10633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 41139548 - 41139475
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| |||||| ||||||| ||||||||||||| ||| ||||||| | | |  |||||||||||||||||    
T  41139548 gaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaagcttcc--ccatccaaacacactct 41139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 47108318 - 47108354
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaatt 163  Q
    |||||||||||||||| ||||||||||||||||||||    
T  47108318 agagtgtgtttggatgagggaatgttttgagggaatt 47108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 55266892 - 55266852
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctattgtt 191  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  55266892 ttttgagggaattcaactactttaaggtgaattttattgtt 55266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 857398 - 857363
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| ||||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaat 857363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 2125857 - 2125892
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||| ||||||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaat 2125892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 10354417 - 10354342
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||| || || || ||||  |||||||||||| ||| |||||||||||||||  ||| |||||||||||    
T  10354417 gaattcacctccaaatatttcaattttctcaaaacattacattacctcaaaacattcatttatctaaacacactct 10354342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 15660342 - 15660307
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| |||||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaat 15660307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 16516171 - 16516206
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||||||||||||| |||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaat 16516206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 21012596 - 21012631
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21012596 attccctcaaaacattcgtccatccaaacacactct 21012631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 26251015 - 26251054
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  26251015 attccctcaaaacattcccccatccaaacacactctaaaa 26251054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 26534506 - 26534577
Alignment:
Q  127 agagtgtgtttggatgggggaatg-----ttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||  |||||   |||||||||||||||||    
T  26534506 agagtgtgtttggatgggggaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttg 26534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 41498653 - 41498614
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  41498653 cttaagagtgtgtttggatggaggaatattttgagggaat 41498614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 46242542 - 46242597
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacatt 248  Q
    ||||||||||||||||| ||  ||||| ||||||||||| ||| ||||||||||||    
T  46242542 gaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaacatt 46242597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 4441338 - 4441372
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| ||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaat 4441372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 29091175 - 29091221
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| | |||||||||||||||||    
T  29091175 aatgttttgagggaattcaaatactttgatgtgaattctattgtttg 29091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 40548273 - 40548207
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||||| |  |||||||||||| |||||||  |||||  ||||||||| ||||||||    
T  40548273 agagtgtgtttggatgagaaaatgttttgaggaaattcaaatactttggggtgaattccattgtttg 40548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 41139511 - 41139557
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||| |||||||  ||||| |||||||||||||||||||    
T  41139511 aatgttttgaggaaattcaaatacttttaggtgaattctattgtttg 41139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 54566187 - 54566229
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  54566187 ttaagagtgtgtttggatgaaagaatgttttgagggaattcaa 54566229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 4896753 - 4896716
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattc 184  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  4896753 aatgttttgagggaattcaactactttgaggtgaattc 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 26534568 - 26534523
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccc 238  Q
    ||||||||  ||||||| ||||||||||||||||||||| ||||||    
T  26534568 gaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 42543024 - 42542991
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||| ||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaat 42542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 46724263 - 46724226
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  46724263 agtgtgtttggatggggaaatattttgagggaattcaa 46724226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 17727139 - 17727103
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| |||||||||| |||||||||    
T  17727139 aattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 36456043 - 36456007
Alignment:
Q  151 ttttgagggaattcaaccactttaaggtgaattctat 187  Q
    |||||||| |||||||| |||||||||||||||||||    
T  36456043 ttttgaggaaattcaactactttaaggtgaattctat 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 40338251 - 40338287
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  40338251 aattcacctcaaagtatttgaattccatcaaaacatt 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 56339207 - 56339171
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  56339207 aattcacatcaaagtatttgaattccctcaaaacatt 56339171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 5e-48; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 17110990 - 17110869
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  17110990 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 17110891  T
Q  247 ttcatccatccaaacacactct 268  Q
    ||   |||||||||||||||||    
T  17110890 tttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 127 - 264
Target Start/End: Complemental strand, 30435385 - 30435250
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||| |||||| |||||| ||||| ||||||||| |||    
T  30435385 agagtgtgtttggatggggaaatgttttgagggaattcaacta-tttaaggtaaattctattgtttaaattcaactcaaa-tagttaaattccctccaaa 30435288  T
Q  227 cattagattccctcaaaacattcatccatccaaacaca 264  Q
    ||||| ||||||||||||||||  ||||||||||||||    
T  30435287 cattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 268
Target Start/End: Original strand, 42711304 - 42711439
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 226  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||| || ||||| ||      |||||||| ||||||||||||||||||||||||||    
T  42711304 agagtgtgtttggatggggaaatgttttgaggaaattcaactactttgagttgaatact------tgaattcaactcaaagtagttgaattccctcaaaa 42711397  T
Q  227 cattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| |||||||||||||||||  | |||||||||||||||    
T  42711398 cattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 274
Target Start/End: Complemental strand, 13404948 - 13404821
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || |||||| |||||||||||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |    
T  13404948 aatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 13404849  T
Q  247 ttcatccatccaaacacactctaaaagt 274  Q
    ||   ||||||||||||||| |||||||    
T  13404848 tttccccatccaaacacactataaaagt 13404821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 17110907 - 17111030
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| || ||||||| |    | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  17110907 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 17111006  T
Q  247 ttcatccatccaaacacactctaa 270  Q
    ||  ||||||||||||||||||||    
T  17111007 tttctccatccaaacacactctaa 17111030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 42739944 - 42740048
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccct 221  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||| ||||||| |||| ||||||||| || |||||||||||    
T  42739944 ccttaagagtgtgtttggatggaggaatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataattgaattccct 42740043  T
Q  222 caaaa 226  Q
    |||||    
T  42740044 caaaa 42740048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 3853654 - 3853773
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||||||| |||||||| ||| |||||||| |    
T  3853654 aatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaata 3853753  T
Q  247 ttcatccatccaaacacact 266  Q
    ||   |||||||||||||||    
T  3853754 tttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 3858112 - 3858231
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||||||| |||||||| ||| |||||||| |    
T  3858112 aatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaata 3858211  T
Q  247 ttcatccatccaaacacact 266  Q
    ||   |||||||||||||||    
T  3858212 tttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 14799977 - 14800121
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaa 224  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||| ||| |    |  |||||||||  ||||||||||||||||||||    
T  14799977 taagagtgtgtttggatgggggaatgttttgagggaattaaacta-tttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 14800075  T
Q  225 aacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||  ||||||||||| ||||  |||||||||||||||||||    
T  14800076 aacattactttccctcaaaatattcccccatccaaacacactctaa 14800121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 40046877 - 40046804
Alignment:
Q  195 attcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 40046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 44889429 - 44889350
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaaa 272  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactctaaaa 44889350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 38573543 - 38573433
Alignment:
Q  125 taagagtgtgtttggatgggggaatgt-----tttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattcc 219  Q
    |||||||||||||||||||||||||||     ||||||| |||||||| ||||| || |||||||||||||||||||||| || |||||||||||||| |    
T  38573543 taagagtgtgtttggatgggggaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtttgaattcaactaaaagtagttgaatttc 38573444  T
Q  220 ctcaaaacatt 230  Q
    |||||||||||    
T  38573443 ctcaaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 3853691 - 3853614
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  3853691 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 3853614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 3858149 - 3858072
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  3858149 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 3858072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 33902732 - 33902664
Alignment:
Q  203 caaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  33902732 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaaa 33902664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 33902705 - 33902825
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattg-tttgaattcacctcaaagtag-ttgaattccctcaaaacattagattccctcaaaa 244  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  | |||||||| |||    
T  33902705 aatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaa 33902801  T
Q  245 cattcatccatccaaacacactct 268  Q
    |||||  |||||| ||||||||||    
T  33902802 cattcccccatcccaacacactct 33902825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 14800081 - 14799999
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||    
T  14800081 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaa-tagtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 28324671 - 28324747
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||| ||||| ||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28324671 aattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactctaa 28324747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 23011809 - 23011734
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||  || ||||||||||||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 33377305 - 33377380
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||  |||||||||||||||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 34008799 - 34008865
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  34008799 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 34008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 36103175 - 36103101
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| |||||||| ||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  36103175 aattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 515541 - 515618
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||| |||||||| ||||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  515541 aattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactctaaa 515618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 4156251 - 4156324
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||    
T  4156251 gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 24045035 - 24044958
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||   ||||||||||||||||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactctaa 24044958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 29257359 - 29257436
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||||||||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 29257436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 30445000 - 30444932
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  30445000 taagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 30444932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 35979012 - 35979084
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacac 265  Q
    ||||||||||||||||| ||||||||||||  || |||| ||||||||||||||||| |||||||||||||||    
T  35979012 gaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 4156288 - 4156229
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaa 206  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  4156288 aatgttttgagggaattcaactactttaagatgaattctattgtttgaattcaactcaaa 4156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 13404912 - 13404967
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattc 13404967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 29611388 - 29611454
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||  ||||||||    
T  29611388 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 29611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 44346686 - 44346764
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||| ||||||| ||||||||||| |||||| || |||||||||||||||||  ||||||||||||| ||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacattctaaa 44346764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 29482815 - 29482888
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||| ||||||| |||||||||||||||||| ||  ||||||||||||||||  |||||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 7202861 - 7202921
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaatt 183  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||    
T  7202861 cttaagagtgtgtttggatggatgaatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 8049328 - 8049273
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  8049328 aatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattc 8049273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 26520501 - 26520438
Alignment:
Q  130 gtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  26520501 gtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 26520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 37268086 - 37268169
Alignment:
Q  188 tgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||| ||||||||| || || |||||||||||||||||| ||| |||||||| ||||  | ||||||||||||||||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactctaaa 37268169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 42740068 - 42739969
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||| ||| ||||||||||||||||  | ||| ||||| ||||||    |  |||||| ||||||||||||||||||||||||||||||    
T  42740068 tgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 14312 - 14239
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||||| ||||||||  |||||||||||||||||    
T  14312 aattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattc-cccatccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  204 aaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaaca 262  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 33986078 - 33986004
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||| |||||||| |||||||||||| ||| | |||| ||||||  |||||||||||||||||    
T  33986078 aattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 7202969 - 7202921
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaa 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7202969 agagtgtgtttggatggaggaatgttttgagggaattcaactactttaa 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 9982711 - 9982634
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||||||| || || ||||| |||||||||||| ||| ||| ||||||||| ||||||||||||| |||||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacattc-tccatccaaacacgctctaaa 9982634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 40046872 - 40046930
Alignment:
Q  191 ttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattc 249  Q
    |||||| ||||||||| || ||||||||||||||||||||| ||| |||||||||||||    
T  40046872 ttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattc 40046930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 14991749 - 14991692
Alignment:
Q  211 ttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||| ||||||||||||| ||| |||||||||||||  |||||||||||||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 32626068 - 32626023
Alignment:
Q  191 ttgaattcacctcaaagtagttgaattccctcaaaacattagattc 236  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  32626068 ttgaattcaccttaaagtagttgaattccctcaaaacattatattc 32626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 33377382 - 33377345
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33377382 taagagtgtgtttggatgggggaatgttttgagggaat 33377345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 38573420 - 38573524
Alignment:
Q  133 tgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattag 232  Q
    ||||||||||||  |||||||||||| |||||||| ||||| || ||||||| |    | ||||||| ||||||||||||||||| |||||||||| ||     
T  38573420 tgtttggatggga-aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactac 38573518  T
Q  233 attccc 238  Q
    ||||||    
T  38573519 attccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 42711445 - 42711404
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  42711445 accttaagagtgtgtttggattggggaatgttttgagggaat 42711404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||||||||||||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 31807468 - 31807409
Alignment:
Q  208 tagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||||||||||||||| ||| |||||||||||||   ||||||||||||||||    
T  31807468 tagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 1088285 - 1088360
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||| ||| |||| || ||||||| |||||||||| || |||| |||||||||||| |||| |||||||||||||    
T  1088285 gaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactct 1088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 3853616 - 3853651
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaat 3853651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 3858074 - 3858109
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaat 3858109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 7202900 - 7202865
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||||||||||||||||||||||    
T  7202900 attccctcaaaacattcatccatccaaacacactct 7202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 8469514 - 8469581
Alignment:
Q  126 aagagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||| | |||||||||||||||||||||||   || | |||||||||| ||||||||    
T  8469514 aagagtgtgtttggacgagggaatgttttgagggaattcaagtcctattaggtgaattccattgtttg 8469581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 11744727 - 11744802
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||| ||| |||||||||||| ||| ||||||| |||||||| ||| ||||   ||||||||||||||||    
T  11744727 gaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactct 11744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 14991688 - 14991723
Alignment:
Q  123 cttaagagtgtgtttggatgggggaatgttttgagg 158  Q
    ||||||||||||||||||||||||||||||||||||    
T  14991688 cttaagagtgtgtttggatgggggaatgttttgagg 14991723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 29257434 - 29257399
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaat 29257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 27322735 - 27322697
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  27322735 ttaagagtgtgtttggatgggagaatgttttgagggaat 27322697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 7202934 - 7202971
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  7202934 attccctcaaaacattcctccatccaaacacactctaa 7202971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 26520447 - 26520484
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26520447 gaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 27322687 - 27322732
Alignment:
Q  223 aaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 30444941 - 30444978
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  30444941 gaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 32626029 - 32626066
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattc 184  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  32626029 aatgttttgagggaattcaactactttaaggtgaattc 32626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 34008856 - 34008819
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34008856 gaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 36103099 - 36103136
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36103099 taagagtgtgtttggatggaggaatgttttgagggaat 36103136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 29482888 - 29482856
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaa 161  Q
    |||||||||||||||||||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaa 29482856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 29611444 - 29611408
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||||||||| ||||||||||||||||||||    
T  29611444 aattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 8409987 - 8409944
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaattca 165  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||    
T  8409987 cctttagagtgtgtttggatggaggaatgttttaagggaattca 8409944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 11744764 - 11744717
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttga 194  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||    
T  11744764 aatgttgtgaaggaattcaactagtttaaggtgaattctattgtttga 11744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 24044960 - 24044995
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| |||||||||||||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaat 24044995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 28324745 - 28324710
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaat 28324710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 30444963 - 30444998
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30444963 attccctcaaaacattcctccatccaaacacactct 30444998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 42739984 - 42739949
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42739984 attccctcaaaacattcctccatccaaacacactct 42739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 162
Target Start/End: Complemental strand, 44346757 - 44346726
Alignment:
Q  131 tgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaat 44346726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 44889354 - 44889389
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaat 44889389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 8409947 - 8409985
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  8409947 attcccttaaaacattcctccatccaaacacactctaaa 8409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 13144658 - 13144620
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacatta 231  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  13144658 gaattcacctcaaagtatttgaattccctcataacatta 13144620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 14800119 - 14800085
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaa 161  Q
    ||||||||||||||||||||||| |||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaa 14800085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 36625293 - 36625251
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaattcaa 166  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  36625293 ttaagagtgtgtttggatgaaggaatattttgagggaattcaa 36625251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 515621 - 515580
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||| ||||||||||||||||| |||||||||||| |||||    
T  515621 acctttagagtgtgtttggatggaggaatgttttgaaggaat 515580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 4156332 - 4156291
Alignment:
Q  121 accttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||| |||||||||||||||| |||| ||||||||||||    
T  4156332 accttaatagtgtgtttggatgggagaatattttgagggaat 4156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 23011732 - 23011769
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaat 23011769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 29611423 - 29611386
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  29611423 attccctcaaaacattcccccatccaaacacactctaa 29611386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 32626119 - 32626082
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  32626119 taagagtgtgcttggatgggggaatcttttgagggaat 32626082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 34008834 - 34008797
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  34008834 attccctcaaaacattcccccatccaaacacactctaa 34008797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 34388527 - 34388556
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgag 157  Q
    ||||||||||||||||||||||||||||||    
T  34388527 gagtgtgtttggatgggggaatgttttgag 34388556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 40046802 - 40046839
Alignment:
Q  125 taagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||||||  |||||||||||||||||    
T  40046802 taagagtgtgtttggatggatgaatgttttgagggaat 40046839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 32626069 - 32626117
Alignment:
Q  220 ctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||||||| |||||||||||| ||||  |||||||| ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactct 32626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 35979084 - 35979052
Alignment:
Q  130 gtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||| ||||||||||||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaat 35979052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 443 - 562
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  443 aatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 542  T
Q  247 ttcatccatccaaacacact 266  Q
    |||  |||||||||||||||    
T  543 ttcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 526 - 405
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||| ||| |    | |||||||||   |||||||||||||||||||||||||||  ||||||||||| |    
T  526 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaata 427  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  426 ttcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 562 - 529
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaat 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 2150 - 2031
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2150 aatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 2051  T
Q  247 ttcatccatccaaacacact 266  Q
    |||  |||||||||||||||    
T  2050 ttcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 2067 - 2188
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaaca 246  Q
    ||||||||||||||||||||| ||||| |||||| ||| |    | |||||||||   |||||||||||||||||||||||||||  ||||||||||| |    
T  2067 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaata 2166  T
Q  247 ttcatccatccaaacacactct 268  Q
    |||  |||||||||||||||||    
T  2167 ttcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 2031 - 2064
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaat 2064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 56395 - 56304
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattagattccc 238  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  56395 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 56284 - 56429
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgt-----tttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattc 218  Q
    ||||||||||||||||||||||||||||     |||||||||||||||| ||||| |||||| ||| |    | |||||||||| |||||||||||||||    
T  56284 ttaagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattc 56383  T
Q  219 cctcaaaacattagattccctcaaaacattcatccatccaaacaca 264  Q
    |||||||||||||  ||||||||||| ||||   ||||||||||||    
T  56384 cctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 2e-29; HSPs: 5)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 42072 - 41994
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactctaaa 41994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 42080 - 42137
Alignment:
Q  211 ttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    |||||||| |||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 42140 - 42102
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  42140 ttaagagtgtgtttggatgggggaacgttttgagggaat 42102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 42035 - 42076
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctatt 188  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  42035 aatgttttgagggaattcaactactttgaggtgaattctatt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 41992 - 42032
Alignment:
Q  122 ccttaagagtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  41992 cctttagagtgtgtttgaatggaggaatgttttgagggaat 42032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 83018 - 82945
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 82981 - 83025
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtt 191  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  82981 aatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 82945 - 82978
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    |||||||||||||||| |||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaat 82978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 4150 - 4075
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactct 268  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |  |||||||||||||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 4113 - 4159
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  4113 aatgttttgagggaattcaaatactttgaggtgaattctattgtttg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 10961 - 10887
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  10961 gaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 17640 - 17561
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaa 206  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||| |||||||||  | |||||||||    
T  17640 agagtgtgtttggatgggggaatgttttgagggaattcaactcctttgaggtgcattttattgtttggttccacctcaaa 17561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 17605 - 17642
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||||||  |||||||||||||||||||    
T  17605 attccctcaaaacattcccccatccaaacacactctaa 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 17588 - 17620
Alignment:
Q  198 cacctcaaagtagttgaattccctcaaaacatt 230  Q
    |||||||||| ||||||||||||||||||||||    
T  17588 cacctcaaaggagttgaattccctcaaaacatt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 7226 - 7153
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    ||||||||  ||||||| ||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||    
T  7226 gaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 7153 - 7186
Alignment:
Q  129 agtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||| ||||||||||||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaat 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 4496 - 4570
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    ||||||||| |||| || ||||||| ||||||||||||| |||||||||||||||||   |||||||||||||||    
T  4496 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 4570 - 4536
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||| |||||||||||||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaat 4536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 5140 - 5214
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactc 267  Q
    ||||||||| |||| || ||||||| ||||||||||||| |||||||||||||||||   |||||||||||||||    
T  5140 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 5214 - 5180
Alignment:
Q  128 gagtgtgtttggatgggggaatgttttgagggaat 162  Q
    ||||||||||||||| |||||||||||||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaat 5180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 109049 - 109115
Alignment:
Q  127 agagtgtgtttggatgggggaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||| | |||||||| ||||||||    
T  109049 agagtgtgtttggatgggggaatgttttgagggaatttaaatactttgatgtgaattccattgtttg 109115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 109084 - 109046
Alignment:
Q  233 attccctcaaaacattcatccatccaaacacactctaaa 271  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaaa 109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 2941 - 2865
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacactctaa 270  Q
    |||||||||||||| || ||||||||||||||||||||| |||| ||| ||||||||  ||||| |||||||||||||    
T  2941 gaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactctaa 2865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 19272 - 19200
Alignment:
Q  193 gaattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||| || ||||||||| ||||||||||| |||||||||||| | ||  |||||||||||||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 19784 - 19855
Alignment:
Q  194 aattcacctcaaagtagttgaattccctcaaaacattagattccctcaaaacattcatccatccaaacacact 266  Q
    |||||||||||||||| |||||||  || ||||||||| |||||||||||||| ||  |||||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 9645 - 9575
Alignment:
Q  124 ttaagagtgtgtttggatgggggaatg-ttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    |||||||||||||| ||||| |||||| ||||||| ||||||||  ||||| |||| ||||| ||||||||    
T  9645 ttaagagtgtgtttagatggaggaatgtttttgagagaattcaaatactttgaggtaaattccattgtttg 9575  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 130392 - 130438
Alignment:
Q  147 aatgttttgagggaattcaaccactttaaggtgaattctattgtttg 193  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||||||    
T  130392 aatgttttgagggaattcaaagacttttaggtggattctattgtttg 130438  T

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