View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11659_low_4 (Length: 457)
Name: NF11659_low_4
Description: NF11659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11659_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 104 - 440
Target Start/End: Original strand, 8358706 - 8359034
Alignment:
| Q |
104 |
tctgcttgtaatgctttgatagtagatgaataaatcaattttaggtttttgaaacatgtacaagaaaataacttgaaacaattttaggtgcagtgaatat |
203 |
Q |
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| T |
8358706 |
tctgcttgtaatgctttgatagtagatgaataaatcaattttaggtttttgaaacatgtacaagaaaataacttgaaacaattttagatgcagtgaatat |
8358805 |
T |
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| Q |
204 |
cattttcttttctattatcaccaattctatgctacatcatttgaaaattacaaaactgagaatctctttcgcaaatttatgtattccctgatcatcaatc |
303 |
Q |
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| T |
8358806 |
cattttcttttctattatcaccaattctatgctacatcatttgaaaattacaaaactgagaatctctttcgcaaatttatgtattccctgatcatcaatt |
8358905 |
T |
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| Q |
304 |
ggggtaaaatacagtgcaacttgtataaatacagtgcgaccattaaatttgattgatcggat------------agatgataccttattacaaaatttgt |
391 |
Q |
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| T |
8358906 |
ggggtaaaatac--------------------agtgcgaccattaaatttgattgatcggataggcgaaccatgagatgataccttattacaaaatttgt |
8358985 |
T |
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| Q |
392 |
cgtcttgttctatggaaatgttttcaagaagaggagcttgtacgataag |
440 |
Q |
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| T |
8358986 |
cgtcttgttctatggaaatgttttcaagaagaggagcttgtacgataag |
8359034 |
T |
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