View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1165_low_16 (Length: 265)

Name: NF1165_low_16
Description: NF1165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1165_low_16
NF1165_low_16
[»] chr6 (14 HSPs)
chr6 (113-246)||(11976367-11976497)
chr6 (21-93)||(10568474-10568546)
chr6 (21-90)||(7049835-7049904)
chr6 (24-93)||(32516952-32517021)
chr6 (21-93)||(7372935-7373007)
chr6 (21-93)||(13613559-13613631)
chr6 (21-93)||(20523441-20523513)
chr6 (21-93)||(9398735-9398807)
chr6 (24-93)||(32439071-32439140)
chr6 (21-93)||(6899560-6899632)
chr6 (24-85)||(11355305-11355366)
chr6 (21-85)||(14338452-14338516)
chr6 (23-93)||(3456823-3456893)
chr6 (28-93)||(11163875-11163940)
[»] chr3 (28 HSPs)
chr3 (21-93)||(51684685-51684757)
chr3 (21-93)||(23293167-23293239)
chr3 (24-93)||(53190759-53190828)
chr3 (21-93)||(44276193-44276265)
chr3 (24-93)||(27899081-27899150)
chr3 (21-93)||(21348798-21348870)
chr3 (21-93)||(42279582-42279654)
chr3 (21-85)||(43765220-43765284)
chr3 (21-93)||(48830803-48830875)
chr3 (24-90)||(7884873-7884939)
chr3 (24-93)||(35905712-35905781)
chr3 (21-93)||(30599915-30599987)
chr3 (24-85)||(2377112-2377173)
chr3 (24-93)||(41977825-41977894)
chr3 (24-93)||(46112562-46112631)
chr3 (21-93)||(17515385-17515457)
chr3 (31-90)||(5133074-5133133)
chr3 (31-93)||(54898512-54898574)
chr3 (24-93)||(2226152-2226221)
chr3 (21-93)||(3152215-3152287)
chr3 (21-93)||(44794282-44794354)
chr3 (21-85)||(46197803-46197867)
chr3 (24-71)||(600806-600853)
chr3 (42-93)||(2660287-2660338)
chr3 (31-89)||(5125880-5125938)
chr3 (21-93)||(19987591-19987663)
chr3 (31-86)||(41623734-41623789)
chr3 (33-90)||(54092764-54092821)
[»] chr1 (17 HSPs)
chr1 (21-93)||(51896129-51896201)
chr1 (24-93)||(34778118-34778187)
chr1 (24-93)||(6818658-6818727)
chr1 (24-93)||(25278348-25278417)
chr1 (24-93)||(31238475-31238544)
chr1 (21-93)||(15104516-15104588)
chr1 (21-93)||(27087358-27087430)
chr1 (24-93)||(4855946-4856015)
chr1 (24-93)||(37344417-37344486)
chr1 (21-83)||(2869664-2869726)
chr1 (21-93)||(46583533-46583605)
chr1 (25-93)||(50556078-50556146)
chr1 (21-68)||(3013447-3013494)
chr1 (21-93)||(33602621-33602693)
chr1 (31-89)||(43868693-43868751)
chr1 (21-93)||(9121645-9121717)
chr1 (21-53)||(52643597-52643629)
[»] chr5 (12 HSPs)
chr5 (24-93)||(30468260-30468329)
chr5 (24-93)||(17574393-17574462)
chr5 (24-93)||(7267918-7267987)
chr5 (21-93)||(34327710-34327782)
chr5 (21-85)||(36057590-36057654)
chr5 (21-93)||(18624985-18625057)
chr5 (24-85)||(2179870-2179931)
chr5 (25-93)||(8539750-8539818)
chr5 (21-93)||(2854304-2854376)
chr5 (21-93)||(29621758-29621830)
chr5 (21-64)||(28819391-28819434)
chr5 (21-92)||(42473584-42473655)
[»] chr8 (18 HSPs)
chr8 (21-93)||(42941849-42941921)
chr8 (24-93)||(8609787-8609856)
chr8 (21-93)||(13282553-13282625)
chr8 (21-93)||(22272411-22272483)
chr8 (21-93)||(41042581-41042653)
chr8 (24-93)||(13108336-13108405)
chr8 (24-93)||(38547303-38547372)
chr8 (21-85)||(26242311-26242375)
chr8 (21-93)||(40339677-40339749)
chr8 (21-93)||(7745109-7745181)
chr8 (21-85)||(9673162-9673226)
chr8 (21-93)||(13486096-13486168)
chr8 (21-93)||(41825641-41825713)
chr8 (21-93)||(15305872-15305944)
chr8 (21-93)||(15486241-15486313)
chr8 (21-93)||(27691229-27691301)
chr8 (21-93)||(33708801-33708873)
chr8 (21-93)||(5036520-5036596)
[»] chr7 (22 HSPs)
chr7 (21-85)||(37115503-37115567)
chr7 (21-93)||(38474120-38474192)
chr7 (24-93)||(6602410-6602479)
chr7 (24-85)||(13168206-13168267)
chr7 (24-93)||(39859209-39859278)
chr7 (24-93)||(45359411-45359480)
chr7 (21-83)||(47386186-47386248)
chr7 (24-93)||(34776895-34776964)
chr7 (21-85)||(24228386-24228450)
chr7 (21-93)||(30940402-30940474)
chr7 (21-93)||(35693347-35693419)
chr7 (21-89)||(48852324-48852392)
chr7 (33-93)||(37796170-37796230)
chr7 (31-90)||(6056844-6056903)
chr7 (24-83)||(23906241-23906300)
chr7 (21-93)||(20478117-20478189)
chr7 (21-60)||(46439507-46439546)
chr7 (24-85)||(29996494-29996555)
chr7 (21-93)||(56405-56477)
chr7 (31-71)||(1546384-1546424)
chr7 (21-93)||(27666042-27666114)
chr7 (31-71)||(31913566-31913606)
[»] chr2 (22 HSPs)
chr2 (21-93)||(39664745-39664817)
chr2 (24-93)||(16377197-16377266)
chr2 (24-93)||(19908246-19908315)
chr2 (21-93)||(40560298-40560370)
chr2 (21-93)||(42519202-42519274)
chr2 (23-93)||(44709744-44709814)
chr2 (21-93)||(2767009-2767081)
chr2 (21-93)||(17696281-17696353)
chr2 (21-93)||(39455244-39455316)
chr2 (24-93)||(16763151-16763220)
chr2 (21-93)||(14389081-14389153)
chr2 (21-93)||(37645562-37645634)
chr2 (21-93)||(6797582-6797654)
chr2 (21-93)||(37020583-37020655)
chr2 (31-90)||(62807-62866)
chr2 (31-86)||(13999889-13999944)
chr2 (43-93)||(6786000-6786050)
chr2 (31-73)||(17946189-17946231)
chr2 (43-93)||(24208061-24208111)
chr2 (28-93)||(15807903-15807968)
chr2 (28-93)||(32608051-32608116)
chr2 (31-67)||(862299-862335)
[»] scaffold1454 (1 HSPs)
scaffold1454 (24-93)||(1338-1407)
[»] chr4 (12 HSPs)
chr4 (21-93)||(41761723-41761795)
chr4 (24-85)||(35404425-35404486)
chr4 (21-93)||(41781614-41781686)
chr4 (21-93)||(42980710-42980782)
chr4 (21-93)||(48646724-48646796)
chr4 (21-93)||(49523199-49523271)
chr4 (24-85)||(51012009-51012070)
chr4 (21-93)||(11601745-11601817)
chr4 (21-93)||(2693230-2693301)
chr4 (21-85)||(48813870-48813934)
chr4 (31-71)||(44972508-44972548)
chr4 (21-93)||(43519499-43519571)
[»] scaffold0058 (2 HSPs)
scaffold0058 (21-93)||(3369-3441)
scaffold0058 (21-93)||(4541-4613)
[»] scaffold0564 (1 HSPs)
scaffold0564 (24-71)||(8357-8404)
[»] scaffold0092 (1 HSPs)
scaffold0092 (28-93)||(36834-36899)


Alignment Details
Target: chr6 (Bit Score: 92; Significance: 9e-45; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 11976497 - 11976367
Alignment:
Q  113 aagagcgatgctagcatcagtcgctgaaacactcgccttcaaccactcgctcaaatatgatgccatgtcactatattcactaaaccagataactggcaac 212  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||  ||| |||||||    
T  11976497 aagagcaatgctagcatcagtcgctgaaacactcgccttcaatcactcactcaaatatg---ccatgtcactatattcactaaaccatgtaattggcaac 11976401  T
Q  213 cggtacaactggttttaaaattctaacacccaca 246  Q
    ||||||||||||||||||||||| ||||||||||    
T  11976400 cggtacaactggttttaaaattccaacacccaca 11976367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 10568546 - 10568474
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaa 10568474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 7049904 - 7049835
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||| ||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7049835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 32517021 - 32516952
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||| ||||    
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaa 32516952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 7372935 - 7373007
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||||  |||||||||||| |||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaa 7373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 13613559 - 13613631
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||||||||| |||||||    
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaa 13613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 20523513 - 20523441
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| || |||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 20523441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 9398807 - 9398735
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||| || ||| ||||||||| |||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaa 9398735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 32439071 - 32439140
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||| |||||| || |||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 32439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 6899632 - 6899560
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| ||||||||||||||||||||| | |||| |||||||||||  ||||||||||| | |||||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaa 6899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 11355366 - 11355305
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    |||||||||||| ||||||||||||||||| |||| |||||| ||| | |||||||||||||    
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattca 11355305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 14338452 - 14338516
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||| || |||||||||||||| ||||| |||| |||||||||||| ||||| |||||||    
T  14338452 acatcatcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattca 14338516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 3456893 - 3456823
Alignment:
Q  23 atcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||| | |||||||  ||||||||||| |||||  |||||||||| |||| |||||||| |||||||    
T  3456893 atcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaa 3456823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 11163940 - 11163875
Alignment:
Q  28 caccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| || |||||||||| |||||| |||||| ||| | ||| ||||||| |||||||    
T  11163940 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 11163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 51684757 - 51684685
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaa 51684685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 23293167 - 23293239
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||    
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaa 23293239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 53190759 - 53190828
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 53190828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 44276193 - 44276265
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaa 44276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 27899081 - 27899150
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||| |||||||    
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaa 27899150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 21348870 - 21348798
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||| |||||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 21348798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 42279654 - 42279582
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||||||||| |||||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaa 42279582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 43765284 - 43765220
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattca 43765220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 48830803 - 48830875
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||| || ||||||||||| ||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaa 48830875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 7884873 - 7884939
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||| ||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 35905712 - 35905781
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||| || ||||||||||||| |||||||    
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaa 35905781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 30599915 - 30599987
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||| ||| ||| ||||||||| |||||||    
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaa 30599987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 2377173 - 2377112
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||||||||||||| |||||| | || |||||||||||| |||||||||||||    
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattca 2377112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 41977894 - 41977825
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| ||||| |||||||||||||| |||| ||||||| |||| ||||||||||||| |||||||    
T  41977894 tcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaa 41977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 46112631 - 46112562
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||  |||||||| ||||| |||| |||||||||||| ||||||||||||| |||||||    
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaa 46112562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 17515457 - 17515385
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||| | |||||||| || |||| |||||||||||| | ||||||||||| |||||||    
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaa 17515385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 5133133 - 5133074
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    |||||||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||    
T  5133133 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggac 5133074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 54898574 - 54898512
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||  ||| ||||||||| || ||||||||||||| |||||||    
T  54898574 cactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaa 54898512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 2226152 - 2226221
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||| ||| ||||||||||| |||  ||||||||| || ||||||||||||| |||||||    
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaa 2226221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 3152215 - 3152287
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||| |||||||||||| ||||   |||||||||| ||||||||||||| |||||||    
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaa 3152287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 44794354 - 44794282
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||| |||||||||||| |||| | |||||||||| |||| |||||||| |||||||    
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaa 44794282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 46197867 - 46197803
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||| |||||||||| |||||||||| | |||| ||||| |||||| |||||||||||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattca 46197803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 600853 - 600806
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggac 71  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  600853 tcatcaccactaacggagcttttagacggagggaccattttgatggac 600806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 2660338 - 2660287
Alignment:
Q  42 cttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| |||| | |||||||||| |||||||||||||||||||||    
T  2660338 cttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaa 2660287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 5125938 - 5125880
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaagga 89  Q
    |||||||||||| ||||||| || ||||||||||||||||| | ||| |||||||||||    
T  5125938 cactaacggagcatttggaccgaaggactattttgatggacgtttgttaaattcaagga 5125880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 19987591 - 19987663
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| |||||| || |||||||||||| |||||  |||||||||| | ||||||||| | |||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaa 19987663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 41623789 - 41623734
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaa 86  Q
    |||||||||||| |||| ||||| ||||||||||||||||| | ||| ||||||||    
T  41623789 cactaacggagcatttgaacggaaggactattttgatggacgtttgttaaattcaa 41623734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 54092821 - 54092764
Alignment:
Q  33 ctaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    ||||| |||| |||||||||| ||||||||||||||||| | ||| ||||||| ||||    
T  54092821 ctaacagagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 54092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 51896129 - 51896201
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaa 51896201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 34778118 - 34778187
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||    
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaa 34778187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 6818658 - 6818727
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 6818727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 25278348 - 25278417
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||    
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaa 25278417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 31238475 - 31238544
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||    
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaa 31238544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 15104588 - 15104516
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaa 15104516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 27087430 - 27087358
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||| |||||||    
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaa 27087358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 4855946 - 4856015
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 4856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 37344486 - 37344417
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||| ||||||    
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaa 37344417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 2869726 - 2869664
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaatt 83  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||    
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatt 2869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 46583533 - 46583605
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| ||||||| |||||||||||| |||| | |||||||||| ||||||||||||| |||||||    
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaa 46583605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 50556078 - 50556146
Alignment:
Q  25 catcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||| | |||||||    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaa 50556146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 3013447 - 3013494
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatg 68  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatg 3013494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 33602621 - 33602693
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||  ||||||||| |||||||||||| |||||| ||||| |||| ||||||||||||| |||||||    
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaa 33602693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 43868751 - 43868693
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaagga 89  Q
    |||||||||||| |||||||||| ||||||||||||||||  | ||| |||||||||||    
T  43868751 cactaacggagcatttggacggaaggactattttgatggatgtttgttaaattcaagga 43868693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 9121645 - 9121717
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | |||||||  ||||||||||| |||||  |||||||||| |||| |||||||| |||||||    
T  9121645 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaa 9121717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 52643597 - 52643629
Alignment:
Q  21 acatcatcaccactaacggagcttttggacgga 53  Q
    |||||||||||||||||||||||||||||||||    
T  52643597 acatcatcaccactaacggagcttttggacgga 52643629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 30468260 - 30468329
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaa 30468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 17574462 - 17574393
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 17574393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 7267987 - 7267918
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||| |||||||    
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaa 7267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 34327782 - 34327710
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| |||||||||||||||  ||| |||||||||||| ||||||||||||| |||||||    
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaa 34327710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 36057590 - 36057654
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 36057654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 18624985 - 18625057
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||   ||||||||||| |||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaa 18625057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 2179931 - 2179870
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||  |||||||||||||    
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattca 2179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 8539818 - 8539750
Alignment:
Q  25 catcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||| | ||||||||||| |||||||    
T  8539818 catcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaa 8539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 2854304 - 2854376
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||| ||| |||||||||||| |||| | |||| ||||| ||||||||||||| |||||||    
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaa 2854376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 29621758 - 29621830
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | |||||||  ||||||||||| |||||  |||||||||| |||| |||||||| |||||||    
T  29621758 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaa 29621830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 28819434 - 28819391
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactatttt 64  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  28819434 acatcatcatcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 42473584 - 42473655
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggacta 92  Q
    ||||||||||   |||||||  ||||||||||| |||||  |||||||||| ||||||||||||| ||||||    
T  42473584 acatcatcactgttaacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggacta 42473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 42941921 - 42941849
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaa 42941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 8609787 - 8609856
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 8609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 13282625 - 13282553
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||| |||||||    
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaa 13282553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 22272483 - 22272411
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||| |||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 22272411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 41042581 - 41042653
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||| |||||||    
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaa 41042653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 13108336 - 13108405
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 13108405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 38547372 - 38547303
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||| |||||||    
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaa 38547303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 26242311 - 26242375
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 26242375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 40339677 - 40339749
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| |||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaa 40339749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 7745109 - 7745181
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||  |||||||||| || |||||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaa 7745181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 9673162 - 9673226
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    |||||||||||||||||| ||||||| |||||| |||| |||||||||||| |||||||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattca 9673226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 13486096 - 13486168
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| ||||| ||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaa 13486168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 41825641 - 41825713
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| |||||| |||||||||||||||  ||| |||||||||||| ||||||||||||| |||||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaa 41825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 15305944 - 15305872
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||   |||||||  ||||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  15305944 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaa 15305872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 15486313 - 15486241
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||   |||||||  ||||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  15486313 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaa 15486241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 27691301 - 27691229
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | | ||||| |||||||||||| ||||   |||||||||| ||||||||||||| |||||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaa 27691229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 33708801 - 33708873
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||| |||||||||||| ||||   |||||||||| | ||||||||||| |||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaa 33708873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 5036596 - 5036520
Alignment:
Q  21 acatcatcaccactaacggagcttt----tggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| ||||||| |||||||    ||||||||  ||| |||||||| ||| |||||||||||||||||||||    
T  5036596 acatcatcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaattcaaggactaa 5036520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 37115503 - 37115567
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattca 37115567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 38474120 - 38474192
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||    
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaa 38474192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 6602479 - 6602410
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 6602410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 13168267 - 13168206
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattca 13168206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 39859209 - 39859278
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||    
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaa 39859278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 45359480 - 45359411
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||||    
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaa 45359411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 47386186 - 47386248
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaatt 83  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||    
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatt 47386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 34776895 - 34776964
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||| ||||||||||| ||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  34776895 tcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 34776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 24228386 - 24228450
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    |||||||||||||||| |||||||||||||| | |||| |||||||||||| |||||||||||||    
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattca 24228450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 30940402 - 30940474
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||| || | ||||||||||| |||||||    
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaa 30940474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 35693347 - 35693419
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| || |||||||| ||| |||| |||||||||||| ||||||||||||| |||||||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaa 35693419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 48852324 - 48852392
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaagga 89  Q
    ||||||||||||||||| |||||||||||| ||  ||| |||||||||||| |||||||||||||||||    
T  48852324 acatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaagga 48852392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 37796170 - 37796230
Alignment:
Q  33 ctaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||||||    
T  37796170 ctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaa 37796230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 6056903 - 6056844
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    |||||||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||    
T  6056903 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggac 6056844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 23906241 - 23906300
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaatt 83  Q
    ||||| ||| |||||||||||||||||||| |||| ||||||||||||  ||||||||||    
T  23906241 tcatcgccattaacggagcttttggacggagggaccattttgatggacgactgtaaaatt 23906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 20478189 - 20478117
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | |||||||  ||||||||||| |||||  |||||||||| |||| |||||||| |||||||    
T  20478189 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaa 20478117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 46439507 - 46439546
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggacta 60  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  46439507 acatcgtcaccactaacggagcttttggacggagggacta 46439546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 29996494 - 29996555
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||| | ||||||| |||||||| ||| |||| | |||||||||| |||||||||||||    
T  29996494 tcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattca 29996555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 56477 - 56405
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| |||||| ||  ||||||||||| ||| |   ||||||||| ||||||||||||| |||||||    
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaa 56405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 1546424 - 1546384
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggac 71  Q
    |||||||||| |||||||||||| |||| ||||||||||||    
T  1546424 cactaacggaccttttggacggagggaccattttgatggac 1546384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 27666042 - 27666114
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||  |||||||||||| ||||   |||||||||| | ||||||||||| |||||||    
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaa 27666114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 31913606 - 31913566
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggac 71  Q
    |||||||||||| |||||||||| | |||||||||||||||    
T  31913606 cactaacggagcatttggacggaagaactattttgatggac 31913566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 39664745 - 39664817
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 39664817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 16377197 - 16377266
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaa 16377266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 19908246 - 19908315
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||    
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaa 19908315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 40560370 - 40560298
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaa 40560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 42519202 - 42519274
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||| |||||||    
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaa 42519274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 44709744 - 44709814
Alignment:
Q  23 atcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 44709814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 2767081 - 2767009
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| || |||| |||||||| ||| ||||||||||||| |||||||    
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaa 2767009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 17696353 - 17696281
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||| ||| | ||||||||||| |||||||    
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaa 17696281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 39455316 - 39455244
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||| |||||||||||||||||| |||||  ||| |||||||||||| ||||||||||||| |||||||    
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaa 39455244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 16763220 - 16763151
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||| |||||||| ||| ||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  16763220 tcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 16763151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 14389081 - 14389153
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| ||||||| | |||||||||||| |||| |||||||||||||| || |||||||| |||||||    
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaa 14389153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 37645634 - 37645562
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| || |||| |||||| |||||||| |||| ||||||||  ||||||| ||||||||||||||||    
T  37645634 acatcatcatcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaa 37645562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 6797654 - 6797582
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||  |||| ||||||||||||||| | || |||||||| ||| ||||||||||| | |||||||    
T  6797654 acatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaa 6797582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 37020655 - 37020583
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | |||||||  ||||||||||| |||||  |||||||||| |||| |||||||| |||||||    
T  37020655 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaa 37020583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 62807 - 62866
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggac 90  Q
    ||||| |||||| |||||||||| ||||||||||||||||| | ||| ||||||| ||||    
T  62807 cactagcggagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 62866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 13999944 - 13999889
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaa 86  Q
    |||||| ||||| |||||||||| ||||||||||||||||| | ||| ||||||||    
T  13999944 cactaatggagcatttggacggaaggactattttgatggacgtttgttaaattcaa 13999889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 6786000 - 6786050
Alignment:
Q  43 ttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaa 6786050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 17946231 - 17946189
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggacat 73  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  17946231 cactaacggaccttttggacggagggaccattttgatggacat 17946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 24208061 - 24208111
Alignment:
Q  43 ttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaa 24208111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 15807903 - 15807968
Alignment:
Q  28 caccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| || |||||||||| |||||| |||||| ||| | ||| ||||||| |||||||    
T  15807903 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 15807968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 32608051 - 32608116
Alignment:
Q  28 caccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| || |||||||||| |||||| |||||| ||| | ||| ||||||| |||||||    
T  32608051 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 32608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 862299 - 862335
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgat 67  Q
    |||||||||||| |||||||||| |||||||||||||    
T  862299 cactaacggagcatttggacggaaggactattttgat 862335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 1407 - 1338
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 41761723 - 41761795
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 41761795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 35404425 - 35404486
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattca 35404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 41781686 - 41781614
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||  ||||||||||||| |||||||    
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaa 41781614  T

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Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 42980782 - 42980710
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| | |||||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaa 42980710  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 48646724 - 48646796
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||| |  ||||||||||||| |||||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaa 48646796  T

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Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 49523271 - 49523199
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||||||||||||||  ||||||||||| |||| ||||||||| || ||||||||||||| |||||||    
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaa 49523199  T

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Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 51012070 - 51012009
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||| |||||| ||||||||||||||| |||| |||||||||||| |||||||||||||    
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattca 51012009  T

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Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 11601817 - 11601745
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||| || |||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||    
T  11601817 acatcagcatcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggactaa 11601745  T

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Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 2693230 - 2693301
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    ||||||||| |||||| ||| ||| ||||||||||||| |||||||||||||| | |||||||||| ||||||    
T  2693230 acatcatcatcactaatggaacttatggacggatggaccattttgatggacat-tttaaaattcaaagactaa 2693301  T

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Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 48813934 - 48813870
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattca 85  Q
    ||||||||||||| ||| ||||||||||||| | |||| |||||||||||| ||| |||||||||    
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattca 48813870  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 44972548 - 44972508
Alignment:
Q  31 cactaacggagcttttggacggatggactattttgatggac 71  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggac 44972508  T

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Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 43519571 - 43519499
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||| ||| |||||||||||| ||||   |||||||||| | ||||||||||| |||||||    
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaa 43519499  T

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Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 3441 - 3369
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||| |||||||||||| |||| | |||||||||| ||||||||||||| |||||||    
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaa 3369  T

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Target: scaffold0058; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 4613 - 4541
Alignment:
Q  21 acatcatcaccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||| | ||||||| |||||||||||| |||| | |||||||||| ||||||||||||| |||||||    
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaa 4541  T

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Target: scaffold0564 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 8404 - 8357
Alignment:
Q  24 tcatcaccactaacggagcttttggacggatggactattttgatggac 71  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||    
T  8404 tcatcaccactaacgaagcttttggacggatgtaccattttgatggac 8357  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 36834 - 36899
Alignment:
Q  28 caccactaacggagcttttggacggatggactattttgatggacatctgtaaaattcaaggactaa 93  Q
    |||||||||||| || |||||||||| |||||| |||||| ||| | ||| ||||||| |||||||    
T  36834 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 36899  T

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