View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11660_high_24 (Length: 331)
Name: NF11660_high_24
Description: NF11660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11660_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 100 - 313
Target Start/End: Original strand, 426967 - 427180
Alignment:
| Q |
100 |
cgacaggcatagctcttgcacaaaatcggtaacatgnnnnnnnnacaggacccatgtaatgtgtatgtgtgtagaattagttttaacattttagatgtgt |
199 |
Q |
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| T |
426967 |
cgacaggcatagctcttgcacaaaatcggaaacatgttttttttacaggacccatgtaatatgtatgtgtgtagaattagttttaacattttagatgtgt |
427066 |
T |
|
| Q |
200 |
acaataaaaattgcttttaagtttagaatagattttaatttgaagttagaaagcgtagttttagactcgaaatattatttttacatattatcgattttct |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
427067 |
acaataaaaattgcttttaagtttagaatagattttaatttgaagttagaaagcgtagttttagactcgaaatattatttttacatattatcgattttct |
427166 |
T |
|
| Q |
300 |
tttgtgcatttggt |
313 |
Q |
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|||||||||||||| |
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| T |
427167 |
tttgtgcatttggt |
427180 |
T |
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