View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11660_high_37 (Length: 291)
Name: NF11660_high_37
Description: NF11660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11660_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 30514843 - 30514580
Alignment:
| Q |
7 |
tctatgagctcgaaaacctagtcaatgtagaatactttttggtaaggttcagtattgtgaatttgttgatcatctttcatcaggttgaatcaaataattt |
106 |
Q |
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| T |
30514843 |
tctatgagctcgaaaacctagtcaatgtagaatactttttggtaaggtttagtattgtgaatttgttgatcatctttcatcaagttgaatcaaataattt |
30514744 |
T |
|
| Q |
107 |
gaaccagaccaagtcaaaccaaactctctttcattaattttattcatttaactcatatagctgtcaaattattgaggctgagaaatcaaagttcatccag |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30514743 |
gaaccagaccaagtcaaaccaaactctctttcattaattttattcatttaactcatatagctgtcaaattattgaggctgagaaatcaaagttcatccag |
30514644 |
T |
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| Q |
207 |
acatataactcccgtgtaatacatgttatacttaaagtggttaacgacatgcctcgtgcaaaag |
270 |
Q |
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||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
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| T |
30514643 |
acatataactcccgtgtaatacatgctatgcttaaagtggttaacgacatgcctcgtgcaaaag |
30514580 |
T |
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