View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11660_high_41 (Length: 250)

Name: NF11660_high_41
Description: NF11660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11660_high_41
NF11660_high_41
[»] chr8 (51 HSPs)
chr8 (1-240)||(23874259-23874498)
chr8 (87-200)||(16852340-16852454)
chr8 (94-200)||(19703456-19703563)
chr8 (87-200)||(968362-968476)
chr8 (87-200)||(26688865-26688979)
chr8 (87-200)||(44780076-44780190)
chr8 (90-198)||(2203494-2203603)
chr8 (87-201)||(11819775-11819890)
chr8 (90-199)||(29858014-29858124)
chr8 (90-198)||(3624582-3624690)
chr8 (93-201)||(23361617-23361726)
chr8 (87-200)||(18540298-18540412)
chr8 (87-200)||(28783060-28783174)
chr8 (87-200)||(29431011-29431125)
chr8 (133-200)||(5264544-5264611)
chr8 (145-200)||(20994479-20994534)
chr8 (87-200)||(8484999-8485113)
chr8 (87-204)||(27750726-27750844)
chr8 (87-182)||(6536538-6536634)
chr8 (87-197)||(18546324-18546435)
chr8 (87-200)||(18897166-18897279)
chr8 (128-200)||(12988428-12988500)
chr8 (87-201)||(33727835-33727950)
chr8 (128-206)||(33017208-33017286)
chr8 (96-189)||(35690035-35690129)
chr8 (87-200)||(5801047-5801160)
chr8 (143-200)||(32157191-32157248)
chr8 (89-200)||(35641865-35641977)
chr8 (129-200)||(4830487-4830558)
chr8 (87-197)||(11492035-11492146)
chr8 (129-200)||(30483889-30483960)
chr8 (128-198)||(8794349-8794419)
chr8 (87-200)||(11793483-11793597)
chr8 (128-202)||(12281492-12281566)
chr8 (87-200)||(43968960-43969074)
chr8 (128-201)||(6530806-6530878)
chr8 (128-201)||(11518881-11518954)
chr8 (128-200)||(3826781-3826853)
chr8 (128-200)||(6436559-6436631)
chr8 (144-200)||(6569791-6569847)
chr8 (129-200)||(8059632-8059703)
chr8 (87-197)||(28560610-28560720)
chr8 (94-200)||(28566105-28566211)
chr8 (94-200)||(28573728-28573834)
chr8 (87-189)||(43594280-43594383)
chr8 (87-180)||(15948011-15948105)
chr8 (132-174)||(35583625-35583667)
chr8 (155-200)||(22268964-22269009)
chr8 (144-201)||(35826310-35826367)
chr8 (128-200)||(13129668-13129740)
chr8 (128-176)||(31087262-31087310)
[»] chr3 (69 HSPs)
chr3 (87-204)||(10445101-10445220)
chr3 (87-193)||(2667869-2667976)
chr3 (87-201)||(14339609-14339724)
chr3 (87-200)||(10499071-10499185)
chr3 (87-200)||(36720381-36720495)
chr3 (100-201)||(14186647-14186748)
chr3 (87-200)||(37788428-37788541)
chr3 (87-199)||(47454579-47454692)
chr3 (90-197)||(30510164-30510272)
chr3 (87-193)||(4844473-4844580)
chr3 (87-193)||(4870169-4870276)
chr3 (87-193)||(8075089-8075196)
chr3 (90-200)||(31520570-31520681)
chr3 (130-200)||(27093367-27093437)
chr3 (128-200)||(8051214-8051286)
chr3 (128-200)||(16354896-16354968)
chr3 (128-200)||(30311306-30311378)
chr3 (94-189)||(32651407-32651503)
chr3 (87-201)||(12761511-12761626)
chr3 (87-201)||(31510680-31510795)
chr3 (87-201)||(51903840-51903955)
chr3 (87-200)||(4222141-4222255)
chr3 (87-192)||(11612307-11612413)
chr3 (138-200)||(31788984-31789046)
chr3 (116-201)||(35111179-35111265)
chr3 (130-200)||(46518628-46518698)
chr3 (87-167)||(52769945-52770026)
chr3 (94-201)||(8170671-8170779)
chr3 (129-197)||(53412948-53413016)
chr3 (130-200)||(8368805-8368875)
chr3 (89-198)||(19716199-19716309)
chr3 (155-200)||(203090-203135)
chr3 (128-200)||(15048065-15048137)
chr3 (128-200)||(21960551-21960623)
chr3 (87-170)||(44743817-44743901)
chr3 (130-202)||(49494152-49494224)
chr3 (129-200)||(5499412-5499483)
chr3 (143-206)||(28928898-28928961)
chr3 (129-203)||(3054991-3055065)
chr3 (130-200)||(7975418-7975488)
chr3 (128-202)||(8796097-8796170)
chr3 (87-200)||(27923005-27923119)
chr3 (128-198)||(42799752-42799821)
chr3 (155-200)||(9832497-9832542)
chr3 (128-201)||(28703408-28703481)
chr3 (128-200)||(2597224-2597296)
chr3 (128-200)||(10828737-10828809)
chr3 (129-197)||(13808890-13808958)
chr3 (128-200)||(19154631-19154703)
chr3 (90-177)||(28531023-28531111)
chr3 (128-196)||(45308906-45308974)
chr3 (161-200)||(11092206-11092245)
chr3 (87-197)||(15034348-15034458)
chr3 (87-201)||(16991541-16991656)
chr3 (94-200)||(26871473-26871580)
chr3 (130-193)||(17554457-17554522)
chr3 (143-201)||(19341800-19341858)
chr3 (166-200)||(26988996-26989030)
chr3 (130-176)||(27259185-27259231)
chr3 (87-200)||(44745944-44746058)
chr3 (128-197)||(39253701-39253769)
chr3 (128-201)||(40063618-40063691)
chr3 (138-190)||(2709387-2709439)
chr3 (128-200)||(9557320-9557392)
chr3 (128-200)||(11642213-11642285)
chr3 (129-193)||(17554778-17554842)
chr3 (90-161)||(33861699-33861771)
chr3 (146-202)||(42430333-42430388)
chr3 (128-200)||(53956384-53956456)
[»] chr2 (54 HSPs)
chr2 (90-200)||(39714992-39715103)
chr2 (87-200)||(29503271-29503384)
chr2 (87-200)||(37480075-37480189)
chr2 (87-200)||(42327357-42327471)
chr2 (87-201)||(23052485-23052600)
chr2 (87-200)||(42602554-42602668)
chr2 (128-201)||(40416394-40416467)
chr2 (88-200)||(19244109-19244222)
chr2 (128-201)||(28846690-28846763)
chr2 (87-198)||(12086091-12086203)
chr2 (128-207)||(12994380-12994459)
chr2 (94-200)||(29197345-29197452)
chr2 (87-200)||(7798998-7799111)
chr2 (87-200)||(21195638-21195752)
chr2 (87-192)||(21213777-21213883)
chr2 (130-200)||(34041594-34041664)
chr2 (128-200)||(42922414-42922487)
chr2 (130-205)||(11062355-11062430)
chr2 (94-200)||(11251087-11251194)
chr2 (87-197)||(33962746-33962857)
chr2 (87-196)||(3001383-3001493)
chr2 (87-200)||(19016031-19016145)
chr2 (128-202)||(42860346-42860420)
chr2 (130-199)||(16918584-16918653)
chr2 (89-200)||(24144676-24144786)
chr2 (136-200)||(1729816-1729880)
chr2 (135-203)||(5147690-5147758)
chr2 (87-200)||(33569820-33569935)
chr2 (87-169)||(33582004-33582087)
chr2 (128-199)||(37755975-37756046)
chr2 (87-200)||(1435064-1435177)
chr2 (128-202)||(4438983-4439057)
chr2 (87-176)||(27244332-27244422)
chr2 (88-197)||(30359657-30359766)
chr2 (87-201)||(41908600-41908715)
chr2 (129-200)||(45672383-45672454)
chr2 (130-200)||(19322768-19322838)
chr2 (87-200)||(26482093-26482206)
chr2 (155-201)||(32106565-32106611)
chr2 (87-200)||(38854424-38854538)
chr2 (138-203)||(16381668-16381733)
chr2 (128-200)||(4060218-4060290)
chr2 (128-200)||(14500277-14500349)
chr2 (129-200)||(45672234-45672305)
chr2 (128-202)||(13803493-13803567)
chr2 (128-202)||(16525176-16525249)
chr2 (160-202)||(23922158-23922200)
chr2 (128-176)||(4262306-4262354)
chr2 (172-200)||(9318122-9318150)
chr2 (87-170)||(12517716-12517799)
chr2 (128-196)||(12801293-12801361)
chr2 (134-193)||(22999229-22999286)
chr2 (128-200)||(30808651-30808723)
chr2 (129-193)||(41202257-41202321)
[»] chr5 (42 HSPs)
chr5 (87-200)||(16773807-16773921)
chr5 (87-200)||(21589288-21589402)
chr5 (87-200)||(30109271-30109384)
chr5 (87-201)||(29075780-29075895)
chr5 (87-202)||(17028226-17028342)
chr5 (87-200)||(22020824-22020938)
chr5 (128-201)||(25627056-25627129)
chr5 (129-200)||(30883203-30883274)
chr5 (128-200)||(14285161-14285233)
chr5 (133-201)||(14495814-14495882)
chr5 (144-200)||(21549157-21549213)
chr5 (128-200)||(34984806-34984878)
chr5 (89-200)||(87388-87499)
chr5 (128-202)||(7918473-7918547)
chr5 (128-200)||(5390856-5390926)
chr5 (116-200)||(26078042-26078127)
chr5 (129-201)||(892479-892551)
chr5 (87-201)||(6844728-6844843)
chr5 (87-201)||(8278237-8278352)
chr5 (129-196)||(43241687-43241754)
chr5 (155-201)||(3252320-3252366)
chr5 (87-200)||(22737082-22737196)
chr5 (133-193)||(1410668-1410728)
chr5 (128-196)||(16436622-16436689)
chr5 (94-197)||(18437088-18437192)
chr5 (129-201)||(19043457-19043529)
chr5 (87-197)||(12877696-12877807)
chr5 (87-169)||(4793042-4793133)
chr5 (87-159)||(29173531-29173604)
chr5 (87-200)||(18169796-18169905)
chr5 (129-176)||(9842851-9842898)
chr5 (87-193)||(28285259-28285366)
chr5 (87-193)||(41730549-41730656)
chr5 (87-189)||(43442207-43442310)
chr5 (128-198)||(18596005-18596075)
chr5 (146-200)||(26598524-26598578)
chr5 (130-196)||(37148030-37148096)
chr5 (140-197)||(15641808-15641865)
chr5 (143-200)||(30735089-30735146)
chr5 (128-201)||(31669029-31669101)
chr5 (87-170)||(84854-84938)
chr5 (87-162)||(27840981-27841057)
[»] chr7 (74 HSPs)
chr7 (87-201)||(43590906-43591021)
chr7 (87-201)||(48771937-48772052)
chr7 (87-200)||(30579335-30579449)
chr7 (128-201)||(26459414-26459487)
chr7 (87-195)||(41519227-41519335)
chr7 (90-196)||(42711962-42712069)
chr7 (128-202)||(39631842-39631916)
chr7 (128-201)||(22760862-22760935)
chr7 (128-200)||(23552118-23552190)
chr7 (87-197)||(15905636-15905746)
chr7 (87-200)||(23301564-23301678)
chr7 (128-201)||(7801179-7801252)
chr7 (128-201)||(30442487-30442560)
chr7 (128-200)||(20335835-20335907)
chr7 (87-200)||(41487362-41487473)
chr7 (131-203)||(42836008-42836080)
chr7 (128-200)||(43215184-43215256)
chr7 (87-201)||(15137552-15137667)
chr7 (134-201)||(25021345-25021412)
chr7 (87-200)||(2446308-2446422)
chr7 (87-200)||(11720922-11721036)
chr7 (87-200)||(17040974-17041088)
chr7 (93-200)||(18056743-18056851)
chr7 (89-200)||(38374563-38374675)
chr7 (128-200)||(45709712-45709784)
chr7 (130-204)||(18363692-18363766)
chr7 (87-200)||(19553454-19553567)
chr7 (87-200)||(26199509-26199623)
chr7 (87-200)||(31835192-31835306)
chr7 (87-200)||(33181172-33181286)
chr7 (119-195)||(7499918-7499995)
chr7 (87-202)||(24513795-24513911)
chr7 (130-201)||(5579240-5579311)
chr7 (87-169)||(37473645-37473728)
chr7 (128-194)||(21877814-21877880)
chr7 (87-180)||(25132341-25132434)
chr7 (87-176)||(26703149-26703239)
chr7 (128-202)||(33869449-33869523)
chr7 (143-193)||(36803646-36803696)
chr7 (87-179)||(5668533-5668626)
chr7 (87-199)||(35513467-35513580)
chr7 (155-200)||(39499750-39499795)
chr7 (128-197)||(43663099-43663168)
chr7 (144-197)||(45976943-45976996)
chr7 (87-194)||(21558134-21558242)
chr7 (128-200)||(25590611-25590683)
chr7 (129-201)||(25956298-25956369)
chr7 (128-200)||(35119383-35119455)
chr7 (130-197)||(4566434-4566501)
chr7 (129-200)||(27776172-27776243)
chr7 (87-193)||(37085511-37085618)
chr7 (130-200)||(5273596-5273666)
chr7 (128-202)||(17113793-17113867)
chr7 (155-201)||(45559199-45559245)
chr7 (130-198)||(7744118-7744186)
chr7 (128-200)||(14058253-14058325)
chr7 (128-200)||(14368281-14368353)
chr7 (155-199)||(22927477-22927521)
chr7 (128-200)||(23945861-23945933)
chr7 (128-200)||(25655232-25655304)
chr7 (134-201)||(3280495-3280562)
chr7 (131-204)||(18011356-18011430)
chr7 (132-198)||(21854550-21854616)
chr7 (128-201)||(2962459-2962531)
chr7 (155-200)||(22932742-22932787)
chr7 (90-189)||(48079653-48079754)
chr7 (133-193)||(3968651-3968711)
chr7 (128-180)||(8108601-8108653)
chr7 (87-170)||(22035428-22035512)
chr7 (132-196)||(23595733-23595797)
chr7 (156-200)||(24107302-24107346)
chr7 (135-179)||(28236592-28236636)
chr7 (130-198)||(29385749-29385817)
chr7 (87-142)||(41975945-41976001)
[»] chr4 (63 HSPs)
chr4 (90-200)||(55427165-55427276)
chr4 (87-200)||(7949416-7949530)
chr4 (87-201)||(37274421-37274537)
chr4 (87-200)||(37720176-37720290)
chr4 (128-201)||(37109355-37109428)
chr4 (90-201)||(19238542-19238654)
chr4 (87-202)||(28635694-28635810)
chr4 (90-200)||(39509070-39509181)
chr4 (87-200)||(8030166-8030280)
chr4 (128-202)||(47044715-47044789)
chr4 (87-196)||(13901746-13901856)
chr4 (87-200)||(21660106-21660220)
chr4 (87-200)||(21668870-21668984)
chr4 (87-201)||(5795370-5795486)
chr4 (128-200)||(24827825-24827897)
chr4 (87-197)||(7292760-7292871)
chr4 (129-200)||(51948480-51948551)
chr4 (128-202)||(9241029-9241103)
chr4 (87-204)||(31826605-31826723)
chr4 (128-202)||(46545709-46545783)
chr4 (87-200)||(51250484-51250598)
chr4 (128-201)||(9936965-9937038)
chr4 (87-183)||(30938181-30938278)
chr4 (128-201)||(31759662-31759735)
chr4 (87-182)||(23377974-23378070)
chr4 (128-200)||(2622399-2622475)
chr4 (87-201)||(46295096-46295211)
chr4 (90-183)||(13015444-13015538)
chr4 (126-200)||(17618281-17618355)
chr4 (87-180)||(51954134-51954228)
chr4 (133-202)||(1730498-1730567)
chr4 (129-182)||(16581711-16581764)
chr4 (155-200)||(27965541-27965586)
chr4 (87-201)||(37443701-37443813)
chr4 (128-185)||(38869783-38869840)
chr4 (128-193)||(49576898-49576963)
chr4 (93-200)||(4185093-4185201)
chr4 (90-201)||(19229173-19229284)
chr4 (128-200)||(19680792-19680864)
chr4 (87-198)||(40283948-40284060)
chr4 (129-200)||(4483306-4483377)
chr4 (87-201)||(13496240-13496355)
chr4 (87-200)||(29195095-29195208)
chr4 (87-180)||(49262646-49262740)
chr4 (128-200)||(2185036-2185109)
chr4 (128-197)||(41346967-41347036)
chr4 (92-196)||(43623411-43623516)
chr4 (90-201)||(8325344-8325456)
chr4 (128-200)||(12798684-12798756)
chr4 (94-145)||(22096577-22096629)
chr4 (165-201)||(45060977-45061013)
chr4 (87-142)||(47386753-47386809)
chr4 (90-200)||(21344817-21344927)
chr4 (87-201)||(40285622-40285737)
chr4 (87-197)||(41683752-41683863)
chr4 (130-200)||(4249177-4249247)
chr4 (155-201)||(15180740-15180786)
chr4 (87-196)||(37980110-37980219)
chr4 (87-155)||(9693460-9693529)
chr4 (120-200)||(56409951-56410031)
chr4 (128-188)||(7539602-7539662)
chr4 (128-180)||(11592157-11592209)
chr4 (87-202)||(26605674-26605790)
[»] scaffold0258 (1 HSPs)
scaffold0258 (87-200)||(15285-15399)
[»] chr1 (70 HSPs)
chr1 (87-199)||(44126396-44126509)
chr1 (87-201)||(52116743-52116858)
chr1 (87-201)||(50901580-50901695)
chr1 (87-200)||(6122794-6122908)
chr1 (129-202)||(9165200-9165273)
chr1 (87-201)||(17745219-17745333)
chr1 (87-204)||(10526819-10526937)
chr1 (87-200)||(21547442-21547556)
chr1 (87-200)||(25494031-25494145)
chr1 (87-200)||(31794226-31794340)
chr1 (128-200)||(36371470-36371542)
chr1 (129-200)||(40257399-40257470)
chr1 (90-200)||(51814494-51814605)
chr1 (87-200)||(25297772-25297886)
chr1 (128-198)||(33700777-33700847)
chr1 (120-200)||(16169973-16170054)
chr1 (128-200)||(4566548-4566620)
chr1 (87-204)||(1094521-1094639)
chr1 (87-200)||(6650595-6650709)
chr1 (87-176)||(12587294-12587383)
chr1 (87-196)||(24047064-24047174)
chr1 (87-180)||(36124853-36124947)
chr1 (128-197)||(15786324-15786393)
chr1 (128-200)||(8177186-8177258)
chr1 (128-200)||(8904414-8904486)
chr1 (128-200)||(19528331-19528403)
chr1 (87-196)||(29817679-29817789)
chr1 (128-201)||(1690081-1690154)
chr1 (89-200)||(952511-952623)
chr1 (128-200)||(2799862-2799934)
chr1 (87-202)||(7743287-7743403)
chr1 (128-200)||(12259260-12259332)
chr1 (90-197)||(24730387-24730495)
chr1 (87-149)||(3799957-3800020)
chr1 (87-201)||(16893393-16893508)
chr1 (87-193)||(17410238-17410345)
chr1 (155-202)||(38978973-38979020)
chr1 (133-200)||(41508831-41508898)
chr1 (87-201)||(44961764-44961879)
chr1 (87-200)||(2219972-2220086)
chr1 (128-206)||(9117113-9117191)
chr1 (87-204)||(14787298-14787416)
chr1 (87-179)||(27476733-27476826)
chr1 (128-201)||(51703778-51703851)
chr1 (128-189)||(52336778-52336839)
chr1 (128-196)||(1247117-1247185)
chr1 (129-201)||(15581147-15581218)
chr1 (136-199)||(18459243-18459307)
chr1 (129-201)||(30689011-30689083)
chr1 (128-180)||(31383802-31383854)
chr1 (90-201)||(45266833-45266945)
chr1 (87-181)||(7219880-7219975)
chr1 (87-197)||(9964441-9964552)
chr1 (129-200)||(11687629-11687700)
chr1 (87-193)||(42983336-42983443)
chr1 (91-196)||(4824975-4825080)
chr1 (128-200)||(21694446-21694515)
chr1 (136-206)||(26232398-26232468)
chr1 (130-200)||(37046985-37047054)
chr1 (163-201)||(42787207-42787245)
chr1 (134-200)||(45235389-45235455)
chr1 (116-200)||(11063556-11063641)
chr1 (134-179)||(12370185-12370229)
chr1 (87-179)||(27223092-27223185)
chr1 (132-193)||(35699959-35700020)
chr1 (87-195)||(36428717-36428826)
chr1 (155-200)||(39012291-39012336)
chr1 (87-167)||(39966126-39966207)
chr1 (93-180)||(52029904-52029993)
chr1 (128-176)||(3265948-3265996)
[»] chr6 (37 HSPs)
chr6 (87-200)||(12234469-12234583)
chr6 (87-200)||(21418470-21418584)
chr6 (87-200)||(33549104-33549218)
chr6 (87-200)||(12188265-12188379)
chr6 (87-200)||(24641152-24641266)
chr6 (87-194)||(34444809-34444917)
chr6 (87-201)||(3715451-3715566)
chr6 (87-180)||(6385882-6385976)
chr6 (130-200)||(31622997-31623067)
chr6 (90-176)||(3172733-3172820)
chr6 (87-200)||(14557962-14558075)
chr6 (87-184)||(20213057-20213155)
chr6 (87-184)||(22107080-22107178)
chr6 (87-199)||(6758384-6758497)
chr6 (128-201)||(30127399-30127472)
chr6 (128-196)||(10338178-10338246)
chr6 (87-201)||(1056647-1056762)
chr6 (128-201)||(11423565-11423638)
chr6 (128-200)||(13330087-13330159)
chr6 (87-201)||(12633008-12633123)
chr6 (134-196)||(6776617-6776679)
chr6 (87-148)||(18263892-18263954)
chr6 (128-198)||(32613144-32613214)
chr6 (136-193)||(24507548-24507605)
chr6 (133-200)||(3779339-3779406)
chr6 (130-201)||(13661520-13661590)
chr6 (128-171)||(23910115-23910158)
chr6 (161-200)||(28028530-28028569)
chr6 (87-180)||(346551-346644)
chr6 (128-202)||(13227162-13227236)
chr6 (87-200)||(14199909-14200023)
chr6 (87-200)||(23241987-23242100)
chr6 (155-200)||(22702-22747)
chr6 (140-201)||(9433606-9433667)
chr6 (130-203)||(14278117-14278189)
chr6 (129-201)||(21943433-21943504)
chr6 (168-200)||(34877117-34877149)
[»] scaffold0118 (1 HSPs)
scaffold0118 (87-201)||(41595-41710)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-197)||(94976-95044)
[»] scaffold0122 (1 HSPs)
scaffold0122 (87-193)||(6884-6988)
[»] scaffold0299 (1 HSPs)
scaffold0299 (128-194)||(11534-11600)
[»] scaffold0180 (1 HSPs)
scaffold0180 (128-189)||(19966-20027)
[»] scaffold0211 (1 HSPs)
scaffold0211 (128-200)||(24053-24125)
[»] scaffold0070 (1 HSPs)
scaffold0070 (128-200)||(42524-42596)
[»] scaffold0032 (1 HSPs)
scaffold0032 (87-200)||(112282-112396)
[»] scaffold1367 (1 HSPs)
scaffold1367 (90-194)||(805-910)
[»] scaffold0236 (1 HSPs)
scaffold0236 (128-195)||(24844-24911)
[»] scaffold0009 (1 HSPs)
scaffold0009 (87-201)||(19809-19924)
[»] scaffold0172 (1 HSPs)
scaffold0172 (87-200)||(15739-15853)
[»] scaffold0337 (1 HSPs)
scaffold0337 (136-193)||(1760-1817)
[»] scaffold0065 (1 HSPs)
scaffold0065 (136-193)||(12196-12253)
[»] scaffold0194 (1 HSPs)
scaffold0194 (128-196)||(13050-13118)
[»] scaffold0056 (1 HSPs)
scaffold0056 (155-201)||(61679-61725)
[»] scaffold0291 (1 HSPs)
scaffold0291 (128-200)||(2474-2546)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 23874259 - 23874498
Alignment:
Q  1 tatagtatattactatatcatcagttaggtgttaatgatatgttatgtaataaaaaagaatttatgcaaaaatgnnnnnnnnnnnnaagaagctaaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||            |||||| |||||||    
T  23874259 tatagtatattactatatcatcagttaggtgttaatgatatgttatataataaaaaagaatttatgcaaaaatgttttttttttttaagaagttaaatta 23874358  T
Q  101 gcccacctaaattatcactagggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  23874359 gcccacctaaattgtcactaggaagaacgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T
Q  201 atttatgcaaaaatgttgtataattatgataatacctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23874459 atttatgcaaaaatgttgtataattatgataatacctttg 23874498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 16852454 - 16852340
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| |||||||||||||||  ||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  16852454 aagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggc 16852355  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  16852354 caacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 19703456 - 19703563
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    ||||||||||||||| ||||  |||||||||||| |||||||||||||| ||||||| ||| |||| ||||||||||| |||||||||||||||||||||    
T  19703456 taaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaaccca 19703555  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  19703556 agtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||   | ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  186 caacccaagtgggtt 200  Q
    |||| ||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 26688979 - 26688865
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||  ||||||| ||||| ||||||||||||| ||||||| ||| ||||| |||||||||| ||| ||||| ||||    
T  26688979 aagaagctaaactagcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggc 26688880  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  26688879 caacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 44780076 - 44780190
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| | |||||||||||| ||||||| ||| ||||||| |||||||| |||| |||||||||    
T  44780076 aagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggc 44780175  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  44780176 caacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 2203603 - 2203494
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||| |||||  |||  |||||||  || |||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||    
T  2203603 aagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 2203504  T
Q  189 cccaagtggg 198  Q
    ||||||||||    
T  2203503 cccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 11819890 - 11819775
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| |||||||||||||| ||||||| ||| ||||||| |||||||| | |||||||||||     
T  11819890 aagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 11819791  T
Q  186 caacccaagtgggtta 201  Q
    |||||||| |||||||    
T  11819790 caacccaaatgggtta 11819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 29858014 - 29858124
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||||||||||  |||   || ||| |||||||||||||||||||||| ||| |||||| ||||||||| ||||||||| |||||||    
T  29858014 aagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaa 29858113  T
Q  189 cccaagtgggt 199  Q
     ||||||||||    
T  29858114 tccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 3624690 - 3624582
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||||||||||  | |  | ||||| |||||||||||||| || |||| ||| |||||||||||||||| |||||||||||||||||    
T  3624690 aagctaaattagcccacctaaattgacccg-gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaa 3624592  T
Q  189 cccaagtggg 198  Q
    ||||||||||    
T  3624591 cccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 23361617 - 23361726
Alignment:
Q  93 ctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccc 191  Q
    |||||||||||||||||||||  ||| || |||||  ||||||||||||| ||||||| ||| |||||||  ||||||||||||||||| ||| ||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccc 23361716  T
Q  192 aagtgggtta 201  Q
    ||||||||||    
T  23361717 aagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 18540412 - 18540298
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||| |  |||||  ||| || ||||| |||||||||||||| ||||||  | | |||||||||||||||| ||||||||||||||    
T  18540412 aagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggc 18540313  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  18540312 caacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 28783174 - 28783060
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||   |||||| ||||| |||||||| ||||||| ||| ||||||||||| |||| ||||||||| | ||    
T  28783174 aagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagc 28783075  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  28783074 caacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 29431125 - 29431011
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  |||||| ||| |  ||||| |||||||||| |||| |||||| ||| ||||||| |||||||| ||||||| | ||||    
T  29431125 aagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggc 29431026  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  29431025 caacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 5264611 - 5264544
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||||| ||| | |||||||| ||||| |||||||||||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  145 ggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 8485113 - 8484999
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  |||  | ||||| ||||  ||||||||| | |||| ||| |||| |||||||||||  |||||||| ||||    
T  8485113 aagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggc 8485014  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  8485013 caacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 27750844 - 27750726
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| ||| | |||||  |||||| | ||| |||||||||||||| ||||||| ||| ||||||| |||||||| | ||||||| |||     
T  27750844 aagaagctaaattagtccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgaggg 27750745  T
Q  186 caacccaagtgggttattt 204  Q
    |||||||| ||||||||||    
T  27750744 caacccaaatgggttattt 27750726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 6536634 - 6536538
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccacta 182  Q
    |||||||||||||| ||||||||||||  ||| || |||||  ||||||||||||| ||||||| ||| ||||| |||||||||| |||||||||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 18546324 - 18546435
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| | ||||||||||  | |  | ||||| |||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||| |    
T  18546324 aagaagctaaattatctcacctaaattgacgccggtgagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagac 18546423  T
Q  186 caacccaagtgg 197  Q
    ||||| ||||||    
T  18546424 caacctaagtgg 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 18897279 - 18897166
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||| | ||||||||||||  ||| ||| |||| ||||| |||||||| ||||||| ||| ||||  |||||||||  ||| ||||||||||    
T  18897279 aagaagctaaat-atcccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggc 18897181  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  18897180 caacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 12988500 - 12988428
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| |||| ||||||| ||| ||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  12988500 cgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 33727835 - 33727950
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||| | |||||  |||||| | ||| |||||||||||||| ||||||| ||| ||| ||| ||| |||  | |||||||||||     
T  33727835 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactaggg 33727934  T
Q  186 caacccaagtgggtta 201  Q
    |||||||| |||||||    
T  33727935 caacccaaatgggtta 33727950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 33017286 - 33017208
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatttat 206  Q
    |||||||||||||| ||||||| ||| ||| |||||| ||||| |||||  || |||||||||||||||||||| ||||    
T  33017286 cgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgggttacttat 33017208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 35690035 - 35690129
Alignment:
Q  96 aattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaac 189  Q
    |||||||| || ||||||  ||| || ||||| |||||||||||||| ||||||| ||| || ||||| ||||||| ||||||||||||||||||    
T  35690035 aattagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 5801160 - 5801047
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcc 186  Q
    ||||| |||||||||||||||||||||| | |  | |||| ||||| |||||| |||||  || ||| ||||| || |||||||  |||||||| ||| |    
T  5801160 aagaaactaaattagcccacctaaattaacccaggagagatcgaacttgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtc 5801061  T
Q  187 aacccaagtgggtt 200  Q
    ||||||||||||||    
T  5801060 aacccaagtgggtt 5801047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 32157248 - 32157191
Alignment:
Q  143 gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||||||||| ||||||    
T  32157248 gaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 35641865 - 35641977
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcca 187  Q
    ||||||||||||||||| |||||||    || | ||||| |||||||||||| ||||||||| ||| |||||||  || |||| | ||||||| || |||    
T  35641865 gaagctaaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagacca 35641964  T
Q  188 acccaagtgggtt 200  Q
    |||||||||||||    
T  35641965 acccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 4830558 - 4830487
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||  || |||| ||| ||||||   |||||||| |||||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 11492035 - 11492146
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||||   ||||| ||||||| |||||||||| ||| ||| |||||||| || |||| |||||||   | ||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgc 11492134  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  11492135 caacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 30483889 - 30483960
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||   ||||||| ||| |||||||  ||||||| |||||||||| ||||||||||||||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 8794349 - 8794419
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||||||||  ||||||| ||| ||| |||||| ||||| ||||||||||| ||||| |||||||||    
T  8794349 cgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 11793483 - 11793597
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||  |||  || |||| | ||||| |||||| ||||||| ||| ||||| ||||||||||  || ||||| || |    
T  11793483 aagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagac 11793582  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  11793583 caacccaagtgggtt 11793597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 12281566 - 12281492
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||  |||||| | ||||||||    
T  12281566 cgaatctgagacctcgaggaggggcacactctcaggtcccaagccaataccacaagaacaaccctaatgggttat 12281492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 43968960 - 43969074
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||| |||||||||||| ||| || || || |||| ||||||||||  ||||| ||| ||||| | | |||||| ||||||||  | ||    
T  43968960 aagaagataaattagtccacctaaattaacaccagagataatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgc 43969059  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  43969060 caacccaagtgggtt 43969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 6530878 - 6530806
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||| | ||| ||| ||| ||||| |||||||||| ||| ||||| ||||||||||||||||||||    
T  6530878 cgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtta 6530806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 11518881 - 11518954
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||| |||||| ||||||| | | ||||||| || ||||| | |||||||||||| |||||||||||||||    
T  11518881 cgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgggtta 11518954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 3826781 - 3826853
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||| |||| ||||| ||| |||| ||  |  |||| |||||||||||||||||||||||||||||    
T  3826781 cgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtt 3826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 6436559 - 6436631
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||| | ||||| ||| ||||| | |||||||| ||||||||| ||| |||||||||||||||    
T  6436559 cgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  144 aggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||| |||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 8059703 - 8059632
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||| |||||||  || |||| ||  | ||||||||||||||  |||||||||||||||||||    
T  8059703 gaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 28560720 - 28560610
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||| ||||||||||||| |||||| ||||| ||||| |||| ||| ||  ||| ||| ||||  |||||||||  ||||||||||||      
T  28560720 aagaaactaaattaacccacctaaattagcactagagagaatcgaacatgag-ccttgaaaaggagcacactctaaggtcccaaaccaataccactagtt 28560622  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  28560621 caacccaagtgg 28560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 28566211 - 28566105
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    ||||||| ||||||||||||| ||| |  ||||| ||||| |||| ||| ||| ||| ||| ||||  |||||||||  ||||||||||||| |||||||    
T  28566211 taaattaacccacctaaattagcaccaaagagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaaccca 28566113  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  28566112 agtgggtt 28566105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 28573834 - 28573728
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    ||||||| ||||||||||||| ||| |  ||||| ||||| |||| ||| ||| ||| ||| ||||  |||||||||  ||||||||||||| |||||||    
T  28573834 taaattaacccacctaaattagcaccaaagagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaaccca 28573736  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  28573735 agtgggtt 28573728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 43594280 - 43594383
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| ||||||||||||| | |||||  |||||| ||||| |||||||||||||| |||||||  || | ||| || ||| ||| ||||| ||||||||    
T  43594280 aagaaactaaattagcccatccaaattgacactagagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaatatcactaggc 43594379  T
Q  186 caac 189  Q
    ||||    
T  43594380 caac 43594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 15948011 - 15948105
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    |||||| ||||||||||||| |||| |  |||| | ||||| |||||||  ||| ||||||||| ||| ||||||| |||||||| |||||||||    
T  15948011 aagaaggtaaattagcccacttaaaatgacactggagagaatcgaacctatgacatcgaggaggagcatactcccaagtcccaagccaataccac 15948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 35583667 - 35583625
Alignment:
Q  132 cctgagacctcgaggaggcgcagactcccaggtcccaagtcaa 174  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  35583667 cctgagacctcgaggaggagcaaactcccaagtcccaagtcaa 35583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 22268964 - 22269009
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||    
T  22268964 actccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 22269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 35826367 - 35826310
Alignment:
Q  144 aggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||| ||| |||| |||||| |||| || ||||||||||||||||||| |||||||    
T  35826367 aggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtta 35826310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 13129740 - 13129668
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| |||| ||||||| ||  ||||||| |||||||  |||| ||||| ||| ||||||||||||||    
T  13129740 cgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaacccaagtgggtt 13129668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 31087262 - 31087310
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||||||||||| | | |||||||| ||||||| |||||    
T  31087262 cgaacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 10445101 - 10445220
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaa-taccactagg 184  Q
    ||||||||||||||||||||  |||||| ||| || ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||| | ||||||||    
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactagg 10445200  T
Q  185 ccaacccaagtgggttattt 204  Q
    ||||||||||||||||||||    
T  10445201 ccaacccaagtgggttattt 10445220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 2667976 - 2667869
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| |||||||||||||||  |||||| || || |||||||||||||||||||| | ||| |||||||| ||||||| ||||||||| ||||    
T  2667976 aagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggc 2667877  T
Q  186 caacccaa 193  Q
    ||||||||    
T  2667876 caacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 14339724 - 14339609
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||| ||||  |||||||||||| |||||||||||| | ||||||| ||| |||||||  ||||||| ||||||||| ||||    
T  14339724 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggc 14339625  T
Q  186 caacccaagtgggtta 201  Q
    ||| |||| |||||||    
T  14339624 caatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 10499071 - 10499185
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||   | ||||| ||||||||||||||| |||| | |||||||||||| ||||||| ||||||||| ||||    
T  10499071 aagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggc 10499170  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  10499171 caacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 36720495 - 36720381
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||  ||||||||||||||  |||||| ||||| ||||||||| |||||||||||| ||| |||||||  ||||||| ||||||||| || |    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  36720395 caacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 14186748 - 14186647
Alignment:
Q  100 agcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    ||||||||||||||  |||  | ||||| |||||||||||||| ||||||| ||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  199 tta 201  Q
    |||    
T  14186649 tta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 37788428 - 37788541
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| |||  | |||||  |||||| ||||| |||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||| |||    
T  37788428 aagaagctaaattaacccctc-aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggc 37788526  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  37788527 caacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 47454579 - 47454692
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| || ||||||||||||  || | ||||||| |||||||||||||||||||||| ||| ||||| || || |||| ||||||||||||      
T  47454579 aagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaa 47454678  T
Q  186 caacccaagtgggt 199  Q
    ||||||||||||||    
T  47454679 caacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 30510164 - 30510272
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||| || |||  |||||| ||||| |||||||||||||||||| ||| ||| ||||| |||||||||| || |||||| ||| |||    
T  30510164 aagctaaattagcccacttagattgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaa 30510263  T
Q  189 cccaagtgg 197  Q
    |||||||||    
T  30510264 cccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 4844473 - 4844580
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  |||||  |||  | ||||| ||| |||||||||||||||||| ||| |||||||| ||||||||||||||||| || |    
T  4844473 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagac 4844572  T
Q  186 caacccaa 193  Q
    ||||||||    
T  4844573 caacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 4870169 - 4870276
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  |||||  |||  | ||||| ||| |||||||||||||||||| ||| |||||||| ||||||||||||||||| || |    
T  4870169 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagac 4870268  T
Q  186 caacccaa 193  Q
    ||||||||    
T  4870269 caacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 8075089 - 8075196
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| ||||||||| |||| ||||||| ||| ||||||| |||||||| | |||||||||||     
T  8075089 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 8075188  T
Q  186 caacccaa 193  Q
    ||||||||    
T  8075189 caacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 31520570 - 31520681
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||  |||||  |||| | ||||| | ||||| |||||||||||||| ||| |||||||| ||||||| |||| |||| |||||||    
T  31520570 aagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaa 31520669  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  31520670 cccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 27093367 - 27093437
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| ||||||| ||| ||||||| || ||||| |||||||||||||||||||||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 8051286 - 8051214
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||||||||  ||| ||| |||||||||||| ||||||||| |||||||||||||||||||    
T  8051286 cgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 16354896 - 16354968
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||  ||||||| ||| |||| ||||| ||||| |||||||||||||||||||||||||||||    
T  16354896 cgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 30311378 - 30311306
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||| | ||||||||||||||||||| |||||||    
T  30311378 cgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 32651407 - 32651503
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaac 189  Q
    |||| ||||||| |||||||  |||||| ||||| |||| |||||| || ||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  32651407 taaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 12761626 - 12761511
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||| |||||||||||||||  |||  |||| || ||||||||||| ||| ||||||  || |||||||||||||||||||||||||| || |    
T  12761626 aagaagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagac 12761527  T
Q  186 caacccaagtgggtta 201  Q
    ||||||| | ||||||    
T  12761526 caacccatgcgggtta 12761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 31510680 - 31510795
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||||||||||||||||| |||  ||||||| ||||| | |||||    ||||| ||| ||||||| |||||||||||||||||| || |    
T  31510680 aagaatctaaattagcccacctaaattagcaccggggagaatcgaactttagaccgtatggaggagcatactcccaagtcccaagtcaataccaccagac 31510779  T
Q  186 caacccaagtgggtta 201  Q
    ||||| ||||||||||    
T  31510780 caacctaagtgggtta 31510795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 51903840 - 51903955
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  |||||  |||  | ||||| ||||||||||||| |||||||| ||| |||||||| ||||||| ||||||||  |||     
T  51903840 aagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggt 51903939  T
Q  186 caacccaagtgggtta 201  Q
    ||||||| ||||||||    
T  51903940 caacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 4222255 - 4222141
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||| || | ||||||||||  ||| || ||||| ||||||| |||| | ||||||| ||| |||||||| ||||||| ||||||||||| ||    
T  4222255 aagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagc 4222156  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  4222155 caacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 11612413 - 11612307
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| | |||||||||  |||  ||||| | ||||||||||||||  |||||| ||| |||||||| |||||||| |||||||| ||||    
T  11612413 aagaagctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggc 11612314  T
Q  186 caaccca 192  Q
    |||||||    
T  11612313 caaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  138 acctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| ||| |||||||| ||||||| ||||| |||||||||||||||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 35111265 - 35111179
Alignment:
Q  116 cactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||| || ||||| |||||||||||||| | ||| ||||||||||| ||| ||||| |||||||||||| ||||||||||||    
T  35111265 cactagggaaaatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtta 35111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 46518698 - 46518628
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| |||| ||||||| ||| |||||||| ||||||| ||||||||||| |||||||||||||||||    
T  46518698 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 52769945 - 52770026
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtccc 167  Q
    |||||||||||||||||||||||||||  |||||  ||||| ||||||||||||||| |||||| ||| |||||||| ||||    
T  52769945 aagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 8170779 - 8170671
Alignment:
Q  94 taaattagcccacctaaattatcactag-ggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    |||||||||||||| |||||  ||| || ||| | |||||||||||||| ||| ||| ||| ||||||| ||  |||| |||||||||||||||||||||    
T  8170779 taaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaaccca 8170680  T
Q  193 agtgggtta 201  Q
    | |||||||    
T  8170679 aatgggtta 8170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 53413016 - 53412948
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    ||||||||||||| ||||||| ||| ||||||||||  |||| |||||||||||| |||||||||||||    
T  53413016 gaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 8368805 - 8368875
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||| | ||| ||| ||||||  ||||||||||||||||||||||| ||| ||||||    
T  8368805 aacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggtt 8368875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 19716309 - 19716199
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcca 187  Q
    ||||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||| ||||||| ||| |||||  ||||||||| ||| ||||| | | ||    
T  19716309 gaagctaaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaacaccaccatgtca 19716210  T
Q  188 acccaagtggg 198  Q
    |||||| ||||    
T  19716209 acccaaatggg 19716199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 203135 - 203090
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  203135 actccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 15048065 - 15048137
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| | |||||| ||||||| | |||||| || |||||||||||||||||    
T  15048065 cgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 21960623 - 21960551
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||  |||||||| ||||||    
T  21960623 cgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 44743817 - 44743901
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaag 170  Q
    |||||||||||||| |||||| |||||  |||| | || || |||||||||||||||||||||| ||| |||||||| |||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 49494152 - 49494224
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||||||||||||||| | ||| |||||||  |  ||||||||||||||||||| |||||||||| |||||    
T  49494152 aacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagttat 49494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 5499412 - 5499483
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||||||  |||||| ||| |||| ||| || |||||||||||||| |||||||||||||||||||    
T  5499412 gaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 28928898 - 28928961
Alignment:
Q  143 gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatttat 206  Q
    ||||||| ||| |||| ||| ||||||| ||||||||||||||||| |||||||| ||||||||    
T  28928898 gaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtggattatttat 28928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 3055065 - 3054991
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatt 203  Q
    |||||||||| || ||||||  |||  |||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggttatt 3054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 7975488 - 7975418
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||| ||||||| ||| |||||||| ||||||| | ||||||||||||||||| || ||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtt 7975418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 8796097 - 8796170
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| |||||||| ||||||| ||| ||||||| | |||  | |||||||||||||||||||||||||||||||    
T  8796097 cgaacttgagaccttgaggaggagcatactcccaagcccccgg-caataccactaggccaacccaagtgggttat 8796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 27923005 - 27923119
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| ||||| |||||  |||  | | ||| ||||||||||||   ||||||| ||| ||| ||| |||||||| ||||||||| ||||    
T  27923005 aagaagctaaattagtccacccaaattgacacaggtgggaatcgaacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggc 27923104  T
Q  186 caacccaagtgggtt 200  Q
    ||||| |||||||||    
T  27923105 caacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 42799752 - 42799821
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||||||||| ||| ||| ||| ||||| |||||||||| ||| ||||| |||||||||||||||||    
T  42799752 cgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 9832542 - 9832497
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||    
T  9832542 actcccaggtcccaagccaataccaccgggccaacccaagtgggtt 9832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 28703408 - 28703481
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| || |||| ||| |||||||| |||||||  |||| |||| | |||||||||||||||||    
T  28703408 cgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtta 28703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 2597224 - 2597296
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||| |||||| ||| ||||| |  ||| ||| ||||||||| || ||||||||||||||||    
T  2597224 cgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 10828737 - 10828809
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||  || ||| ||| |||||||||||| ||| ||||| ||||||| || ||||||||||||    
T  10828737 cgaacctgagaccttaagtaggagcatactcccaggtcctaagacaatatcactaggtcagcccaagtgggtt 10828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 13808890 - 13808958
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    ||||||||||||| ||||||| ||| ||| |||| |||||||||||||  || || |||||||||||||    
T  13808890 gaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 19154703 - 19154631
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||  |||||| ||| |||| |||| | |||| |||||| ||||||||||||||| ||||||    
T  19154703 cgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggtt 19154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 28531023 - 28531111
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaatac 177  Q
    |||||||||||||||||| |||||  ||| || |||||  || ||| |||||||||||||| ||| |||||||| ||||||| ||||||    
T  28531023 aagctaaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 45308906 - 45308974
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||||||||||||| ||| |||| || |||||||  ||||||||| ||  |||||||||||    
T  45308906 cgaacctgagacctcgaggaggagcatactcacaagtcccaaaccaataccaccagaacaacccaagtg 45308974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 11092206 - 11092245
Alignment:
Q  161 aggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  11092206 aggtcccaagccaacaccactaggccaacccaagtgggtt 11092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 15034458 - 15034348
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| |||||||| |||| |||||  ||| ||||||||  ||||||||||||| ||| |||  ||  |||| |||||||||| ||| ||||| ||||    
T  15034458 aagaagcaaaattagctcaccgaaattggcaccagggagaattgaacctgagaccttgag-aggatcaccctccaaggtcccaaggcaacaccaccaggc 15034360  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  15034359 caacccaagtgg 15034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16991656 - 16991541
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||| ||||||  ||   | ||||| | || |||||||||| | || | | | |||||||| ||||||| ||||||||| ||||    
T  16991656 aagaagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggc 16991557  T
Q  186 caacccaagtgggtta 201  Q
    |||||||| |||||||    
T  16991556 caacccaaatgggtta 16991541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 26871473 - 26871580
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    |||||||||||||| |||||  || | || |||| | ||||| |||| | ||||||| | | ||||| |||||||||| ||| ||||| |||||||||||    
T  26871473 taaattagcccacccaaattggcattgggtagaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaaccca 26871572  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  26871573 agtgggtt 26871580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 17554522 - 17554457
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactccca--ggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||||||||| || |||| |||||||| ||  ||||||||||||||| ||| ||||||||||||    
T  17554522 aacctgagaccttgaagaggagcagactctcacaggtcccaagtcaatatcaccaggccaacccaa 17554457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 19341858 - 19341800
Alignment:
Q  143 gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||| ||| ||||||| ||| |||||| ||||||||||| |||||||| |||||||    
T  19341858 gaggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtta 19341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 26989030 - 26988996
Alignment:
Q  166 ccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||||||||||||||||||||||    
T  26989030 ccaagccaataccactaggccaacccaagtgggtt 26988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 27259231 - 27259185
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    ||||||| |||||||||||| ||| |||||||||||||||| |||||    
T  27259231 aacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 44745944 - 44746058
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||| ||||| ||| |||||  |||| ||||||| ||||||||||| |   | |||| ||| | ||| ||||||||||| |||||||| ||||    
T  44745944 aagaagccaaactagcctaccaaaattggcactggggagaatcgaacctgagaaccataagaggagcataatccaaggtcccaagtgaataccacaaggc 44746043  T
Q  186 caacccaagtgggtt 200  Q
    ||||| |||||||||    
T  44746044 caaccaaagtgggtt 44746058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 39253769 - 39253701
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||||||||||| || |||| ||| |||||||| ||||||||| | ||||||||| ||||| ||||||    
T  39253769 cgaacctgagaccttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtgg 39253701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 40063691 - 40063618
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||| ||||||||  |||||| ||| |||| ||| ||||||| |||||| |||| | ||||||||||||||||    
T  40063691 cgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtta 40063618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 2709439 - 2709387
Alignment:
Q  138 acctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacc 190  Q
    |||||||||||| ||| ||| |||| ||||||  |||||||||||||||||||    
T  2709439 acctcgaggaggagcatacttccagatcccaacacaataccactaggccaacc 2709387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 9557392 - 9557320
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||| |||||||||| ||| |||| ||| ||||||| |||||| |  |||||| | ||||||||||    
T  9557392 cgaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggtt 9557320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 11642213 - 11642285
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| |||||||  || | || ||| ||||||||  |||||| |||||||| |||||||||||    
T  11642213 cgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 17554842 - 17554778
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    ||||||||| ||| ||||| | ||| |||||||||||||||| ||||||||| |  |||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 33861699 - 33861771
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactccca 161  Q
    ||||||||||||||||||||||||   | | ||||||| ||||| | |||||||||||||| ||| |||||||    
T  33861699 aagctaaattagcccacctaaattgatattggggagaatcgaacattagacctcgaggaggagcacactccca 33861771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 42430388 - 42430333
Alignment:
Q  146 gaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||| ||| ||||| || ||||||||||||||||| || ||||||||||||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccaccag-ccaacccaagtgggttat 42430333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 53956456 - 53956384
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| ||||||||| || ||| ||| |||||| ||||||||| |||| |||  ||| |||||||||||||||    
T  53956456 cgaacatgagacctcaagaaggggcacactcccgggtcccaagccaatgccatcaggacaacccaagtgggtt 53956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 39715103 - 39714992
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||||||||||    || ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||    
T  39715103 aagctaaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaa 39715004  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  39715003 cccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 29503384 - 29503271
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||| |||||| ||||||  |||  ||||||| |||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||||||    
T  29503384 aagaagctaaatttgcccacttaaattgacacc-gggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggc 29503286  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  29503285 caacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 37480189 - 37480075
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||   ||  ||||||| |||||||||||||| ||||||| ||| |||| ||||||||||| ||||||||| ||||    
T  37480189 aagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggc 37480090  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  37480089 caacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 42327357 - 42327471
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||| |||||||||||||||| |||||  |||    ||||| |||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 42327456  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  42327457 caacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 23052485 - 23052600
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| ||||||||||||||| ||| |  |||||||||||| |||||||||||||| ||||||  ||| ||||||| |||||||| ||||||||| ||||    
T  23052485 aagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggc 23052584  T
Q  186 caacccaagtgggtta 201  Q
    ||||| ||||||||||    
T  23052585 caacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 42602668 - 42602554
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||  | ||||| | ||||| |||||| ||| ||| ||| |||||||||||||||| ||||||||||||||    
T  42602668 aagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggc 42602569  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  42602568 caacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 40416394 - 40416467
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40416394 cgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 19244222 - 19244109
Alignment:
Q  88 agaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcc 186  Q
    |||| ||||||||||||||  |||||  ||| || ||||| |||||||||||||| | ||||| ||| |||| |||||||||||||||||||| ||| ||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagacc 19244123  T
Q  187 aacccaagtgggtt 200  Q
    ||||||||||||||    
T  19244122 aacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 28846763 - 28846690
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||| ||||||||||    
T  28846763 cgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 12086091 - 12086203
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||| |||  | | ||| |||||| ||||||| ||||||| ||| ||| |||||||||||| ||||||||| ||||    
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggc 12086190  T
Q  186 caacccaagtggg 198  Q
    ||||  |||||||    
T  12086191 caacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 12994380 - 12994459
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatttatg 207  Q
    ||||| ||||||||  |||||| ||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  12994380 cgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggttatttatg 12994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 29197345 - 29197452
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    ||||||||||||||||||||  |||  || |||| ||||| |||||| || |||||| ||| ||||||| |||||||||||||||||| | |||||||||    
T  29197345 taaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaaccca 29197444  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  29197445 agtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 7798998 - 7799111
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||| || ||||||  |||| | ||||| |||| |||||| |||||||||| ||| ||||||| |||||||| ||||||||| |||     
T  7798998 aagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccagga 7799096  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  7799097 caacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 21195638 - 21195752
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||| | |||||  |||||| | ||| |||||||||||||| ||||||| ||| ||||||| || ||||| | |||||||||||     
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactaggg 21195737  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  21195738 caacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 21213883 - 21213777
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||| |||||||||||||||  |||  ||||||| ||||||||||||||| ||||||  || |||||||||||||||| ||||||||| || |    
T  21213883 aagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagac 21213784  T
Q  186 caaccca 192  Q
    |||||||    
T  21213783 caaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 34041594 - 34041664
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| ||||||| ||| |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 42922487 - 42922414
Alignment:
Q  128 cgaacctgagacctc-gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||  ||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  42922487 cgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 11062430 - 11062355
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttattta 205  Q
    |||||||||||| ||||||  ||| ||||||| || ||||| ||||| ||||||||||||||||||||||||||||    
T  11062430 aacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttattta 11062355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 11251194 - 11251087
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    ||||||||| ||||||||||  ||| || ||||| | |||||||||||| ||||||| ||| ||| ||| |||||||| ||||||||||| ||||||| |    
T  11251194 taaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaaccta 11251095  T
Q  193 agtgggtt 200  Q
    ||||||||    
T  11251094 agtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 33962746 - 33962857
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||| |||||||||||  ||||| |||||| |||| | |||| |||||||||| ||| |||||||| ||||||  ||||| || |||||    
T  33962746 aagaagataaattagtccacctaaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggc 33962845  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  33962846 caacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 3001493 - 3001383
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||||||||| |||| |  ||| || || || ||||||||||| ||| |||||| ||| ||||| || || |||||||||||||||||||    
T  3001493 aagaacctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggc 3001394  T
Q  186 caacccaagtg 196  Q
    |||||||||||    
T  3001393 caacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 19016145 - 19016031
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||| || ||||||  |||  ||||||| | ||| |||||||||||||||| ||| ||||||| ||| |||| ||||||||  || |    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagac 19016046  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  19016045 caacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 42860420 - 42860346
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||||||| ||| |||||||| ||||| ||||||    
T  42860420 cgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggttat 42860346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 16918584 - 16918653
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggt 199  Q
    ||||| |||||| ||||||| ||| |||||||| ||||||  ||||||||||||||||||||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 24144786 - 24144676
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcca 187  Q
    |||||||||||||||||||||||||  | ||||| | || ||||||||||| ||||| |||| | | ||||  |||||||||||||||||||  ||||||    
T  24144786 gaagctaaattagcccacctaaattggcgctaggaaaaatcgaacctgagatctcgaagaggagtacactc--aggtcccaagtcaataccatcaggcca 24144689  T
Q  188 acccaagtgggtt 200  Q
    | |||||||||||    
T  24144688 atccaagtgggtt 24144676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 1729880 - 1729816
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||||||| ||| ||||||| |||||||| |||||||||||| ||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 5147690 - 5147758
Alignment:
Q  135 gagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatt 203  Q
    ||||||| ||| ||| ||| |||||||| || ||||||||||||||||| |||||||||||||||||||    
T  5147690 gagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttatt 5147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 33569820 - 33569935
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaa-taccactagg 184  Q
    ||||||| ||||||| |||| ||||||| ||| || ||||| |||||||||||||||||||| | ||| ||| ||| |||| ||| ||| |||||||| |    
T  33569820 aagaagcaaaattagtccacttaaattagcaccagagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaag 33569919  T
Q  185 ccaacccaagtgggtt 200  Q
    |||||||| |||||||    
T  33569920 ccaacccatgtgggtt 33569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 33582087 - 33582004
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaa 169  Q
    ||||||||||||||| |||||||||||  || ||| ||||| ||||||||||||||| |||||| ||| |||| ||||||||||    
T  33582087 aagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 37755975 - 37756046
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggt 199  Q
    ||||| |||||||||||| ||| ||| | |||||||||||||| ||||||||| | ||||||||||||||||    
T  37755975 cgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 1435177 - 1435064
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||| || ||||| ||||| |||||||| ||||||  ||| ||||| |  ||||||| || |||||||| ||    
T  1435177 aagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgc 1435079  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  1435078 caacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 4438983 - 4439057
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| || ||||| ||||||| ||| |||| ||| |||||||| ||||||| ||||||||||||||||||||||    
T  4438983 cgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 27244422 - 27244332
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||||| ||| ||||||| ||||   ||||| ||||||| | |||||||||||| ||| ||||||||||||||| ||||||    
T  27244422 aagaagctaaattagctcacttaaattaacactgaagagaatcgaaccttaaacctcgaggaggagcatactcccaggtcccaaatcaata 27244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 30359766 - 30359657
Alignment:
Q  88 agaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcc 186  Q
    |||||||||| ||||||||| |||||  |||| ||||||| ||||  |||||||| ||||||| ||| ||||| |||||||||| ||| ||||| | |||    
T  30359766 agaagctaaactagcccacccaaattggcactggggagaatcgaaa-tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagcc 30359668  T
Q  187 aacccaagtgg 197  Q
    |||||||||||    
T  30359667 aacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 41908600 - 41908715
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||  |||  |||| || ||||| |||||||| ||||||| ||| ||||| ||||| |||  | | ||||| ||||    
T  41908600 aagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggc 41908699  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  41908700 caacccaagtgggtta 41908715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 45672383 - 45672454
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||| |||||||  || ||||| ||||| |||| ||| ||||| |||||||||||||||||||    
T  45672383 gaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaacccaagtgggtt 45672454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 19322838 - 19322768
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||| || |||| ||| |||||||||||||||  ||||||||||||  |||||||||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 26482206 - 26482093
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||||||||||||  |||||  ||||  |||||| |||||||||||||| || |||| ||| ||||| |||||||||| ||| ||||  ||||    
T  26482206 aagaagccaaattagcccactgaaattggcactgaggagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcaggc 26482108  T
Q  186 caacccaagtgggtt 200  Q
    ||||| |||||||||    
T  26482107 caacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 32106611 - 32106565
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  32106611 actccaaggtcccaagtcaacaccaccaggccaacccaagtgggtta 32106565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 38854424 - 38854538
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  | |  | || || |||||||||||||| ||||||  | | |||| |||||| |||||||| ||||||| ||    
T  38854424 aagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgagaccttgaggagaggtacactctcaggtctcaagtcaaaaccactaagc 38854523  T
Q  186 caacccaagtgggtt 200  Q
    |||| ||| ||||||    
T  38854524 caacacaaatgggtt 38854538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 16381668 - 16381733
Alignment:
Q  138 acctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatt 203  Q
    |||| ||||||| | | |||| ||| ||||||| | ||||||||||||||||||||||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggttatt 16381733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 4060218 - 4060290
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||| || ||||||  ||| |||| |||||  |||  |||||||||||||||||||||||||||||    
T  4060218 cgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggtt 4060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14500349 - 14500277
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||| ||||||| ||| |||||||| || ||||   ||||||||||||||| |||||||||||    
T  14500349 cgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 45672234 - 45672305
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||| |||||||  || ||||| ||||| |||| ||| ||||| ||||||| |||||||||||    
T  45672234 gaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaatccaagtgggtt 45672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 13803567 - 13803493
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||||||||||| ||||||| ||| ||||| | ||| |||| ||||| ||||||  |||||||| ||||||||    
T  13803567 cgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttat 13803493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 16525249 - 16525176
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||||||||||| ||| || |||| ||||| | |||||||| ||| ||||  |||||||||||||||||||||    
T  16525249 cgaacctgagaccttgag-agtcgcacactccaacgtcccaagccaacaccatcaggccaacccaagtgggttat 16525176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 23922158 - 23922200
Alignment:
Q  160 caggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||    
T  23922158 caggtcccaagtcaataccactaggtcaatccaaatgggttat 23922200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 4262306 - 4262354
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||| ||||||| ||| ||| |||||||||||| |||||    
T  4262306 cgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 9318122 - 9318150
Alignment:
Q  172 caataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||||||||||    
T  9318122 caataccactaggccaacccaagtgggtt 9318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 12517716 - 12517799
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaag 170  Q
    |||||||||||||||||||||  ||||  ||| |||||||| | ||| |||||||| ||||||| ||| ||||| ||||||||||    
T  12517716 aagaagctaaattagcccacc-caattggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaag 12517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 12801361 - 12801293
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||| | ||||||| ||| || ||||| ||||||   ||||||||||||||||| ||||||    
T  12801361 cgaacctgagactttgaggaggagcatacccccagatcccaaactaataccactaggccaactcaagtg 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 22999286 - 22999229
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||||| ||||||| |||  ||||||||||| ||||||||||||| | ||||||||||    
T  22999286 tgagaccttgaggaggagca--ctcccaggtccaaagtcaataccacaatgccaacccaa 22999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 30808651 - 30808723
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||| ||||||| ||| | || |||||| |||| ||||| ||| || ||||||||||||||||    
T  30808651 cgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgggtt 30808723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 41202321 - 41202257
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||| |||| ||||||||| ||| |||||||| || || ||||||||||| || |||||||||    
T  41202321 gaacctaagacttcgaggaggagcatactcccagatctcaggtcaataccaccagaccaacccaa 41202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 16773921 - 16773807
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||  || ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |    
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagac 16773822  T
Q  186 caacccaagtgggtt 200  Q
    |||| ||||||||||    
T  16773821 caactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 21589402 - 21589288
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| |||||||||||||||  ||| || | ||| |||||||||||| ||||||||  |||||||||||||||||||| ||||||||| ||||    
T  21589402 aagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggc 21589303  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  21589302 caacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 30109271 - 30109384
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcc 186  Q
    |||||||||||||||||||||||||||| |||  |||  | ||||||||||||||| |||||| ||| ||||||||||| |||| ||||||||| | |||    
T  30109271 aagaagctaaattagcccacctaaattagcaccgggggaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagcc 30109370  T
Q  187 aacccaagtgggtt 200  Q
    ||||||||||||||    
T  30109371 aacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 29075895 - 29075780
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||| |||||||  ||| || ||||| ||||| ||||| |||||||||| ||| |||||||| ||||||| ||||||||||||||    
T  29075895 aagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggc 29075796  T
Q  186 caacccaagtgggtta 201  Q
     |||||||||||||||    
T  29075795 aaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 17028226 - 17028342
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  |||||| | ||| | |||||||||||| ||||||| ||| ||||||| |||||||  |||||| ||||||     
T  17028226 aagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggt 17028325  T
Q  186 caacccaagtgggttat 202  Q
    |||||||||||||||||    
T  17028326 caacccaagtgggttat 17028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 22020824 - 22020938
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||||||||||||||||| |||| | ||||| |||| ||||||| || |||||| ||| |||||||| |||||||  |||||||||| ||    
T  22020824 aagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgc 22020923  T
Q  186 caacccaagtgggtt 200  Q
    ||||||||| |||||    
T  22020924 caacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 25627129 - 25627056
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| ||||||| ||| ||||||| || ||||| ||||||||||||||||||||||||||||||    
T  25627129 cgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 30883203 - 30883274
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| |||||||| ||||||| ||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14285233 - 14285161
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| |||||||||| ||||| |||| ||||| ||||||||||||||||||    
T  14285233 cgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 14495814 - 14495882
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||| || ||||||||| |||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  144 aggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 34984878 - 34984806
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| |||||| ||||||| ||| |||||||||| ||||| |||||||||||| ||||||||||||||||    
T  34984878 cgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 87388 - 87499
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||||  |||||  |||| | |  | | |||||||||||| ||||||| ||| |||||||| | ||||| |||||||||||||||||    
T  87388 gaagctaaattagcccactcaaattgacactggaggaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaa 87487  T
Q  189 cccaagtgggtt 200  Q
    || |||||||||    
T  87488 ccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 7918473 - 7918547
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||||| |||||| ||||||| |   |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  7918473 cgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 5390856 - 5390926
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||| |||  |||||| | |||||| |||||||||||||||||||||| ||||||    
T  5390856 cgaacctgagacctcgaggaggagca--ctcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 26078042 - 26078127
Alignment:
Q  116 cactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||||| |||||||||||||| || |||  ||| ||||||| |||||||  |||||||||||||||||||||||||||||    
T  26078042 cactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 892479 - 892551
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||||| ||||||| | | ||||  |||||||||| |||||||||||||||||||||| |||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtta 892551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 6844843 - 6844728
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||  |||||||||||  ||| || || || ||||||| ||||||||||||||  || |||||||  | |||||||||||||||  |||    
T  6844843 aagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggc 6844744  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  6844743 caacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 8278237 - 8278352
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||||||||   |||  | || || | ||| ||||| |||||||||| ||| ||||||| |||||||| ||||||||  || |    
T  8278237 aagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagac 8278336  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  8278337 caacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 43241687 - 43241754
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||||| |||| | ||| ||||| || |||||||||||||||||||| ||||||||||||    
T  43241687 gaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 3252320 - 3252366
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  3252320 actcccaagtctcaagtcaataccactaggccaacccaagtgggtta 3252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 22737196 - 22737082
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||||||||   |  || | ||| |||||||||||| | | ||||| ||| ||| ||| |||||||| |||||||||||| |    
T  22737196 aagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagac 22737097  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  22737096 caacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 1410668 - 1410728
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    ||||||||||||||||| ||| |||||||  ||||||||||||||||| || |||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 16436689 - 16436622
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    ||||| |||||||| ||||||| ||| ||||| || ||||||| |||||||||||||||||||||||||    
T  16436689 cgaacatgagaccttgaggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 18437192 - 18437088
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccca 192  Q
    |||||||| ||| |||||||  |||||| ||||| |||||| || || | ||||||| ||| |||| || ||||||||| |||||||||||||||||| |    
T  18437192 taaattagtccatctaaattggcactagagagaatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaaccta 18437093  T
Q  193 agtgg 197  Q
    |||||    
T  18437092 agtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 19043529 - 19043457
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||| | ||| |||  || ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  19043529 gaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtta 19043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 12877807 - 12877696
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||||||||||  || || ||||| |||||||||||| | ||||||   || |||||||  ||||||  |||| ||||||| |    
T  12877807 aagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactagac 12877708  T
Q  186 caacccaagtgg 197  Q
    |||| |||||||    
T  12877707 caactcaagtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 4793042 - 4793133
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacc--------tgagacctcgaggaggcgcagactcccaggtcccaa 169  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||||||        |||||||||||||||| ||| |||||||||||||||    
T  4793042 aagaagctaaattagcccacctaaattggcactggggagaatcgaacctgtcaacctgagacctcgaggaggagcacactcccaggtcccaa 4793133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcc 159  Q
    |||||||||||||||||||||||||||  ||| || || || ||||||||| |||||||||||| ||| |||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 18169796 - 18169905
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||| ||  |||| | ||||| ||||||| ||||| ||| ||||  || |||||||| |||||||||||||||   ||||    
T  18169796 aagaagctaaattagcccacctaatttggcact-gagagaatcgaacct-agaccacgaagaggaccacactcccagatcccaagtcaatacc---aggc 18169890  T
Q  186 caacccaagtgggtt 200  Q
    |||| ||||||||||    
T  18169891 caactcaagtgggtt 18169905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 9842851 - 9842898
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    ||||| ||||||||||||||| ||| ||||||| ||||||||||||||    
T  9842851 gaacccgagacctcgaggaggagcacactcccaagtcccaagtcaata 9842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 28285366 - 28285259
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||| || |||| ||||||| ||| ||||   ||||||| | ||||| |||| |||    
T  28285366 aagaagctaaattagcccacccaaattgacactagaaagaatcgaacccgataccttgaggaggagcaaactcttcggtcccatgccaatatcactgggc 28285267  T
Q  186 caacccaa 193  Q
    ||||||||    
T  28285266 caacccaa 28285259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 41730656 - 41730549
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||| |||||| |||  |||||| ||| || ||||| ||||| ||| |||| |||| || ||| ||||| | || |||| |||||||||||||||    
T  41730656 aagaagctatattagctcactcaaattaacacgagagagaatcgaacatgataccttgaggtggagcacactccaatgttccaactcaataccactaggc 41730557  T
Q  186 caacccaa 193  Q
    ||||||||    
T  41730556 caacccaa 41730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 43442310 - 43442207
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| ||||||||||||| | |||||  ||  || ||||| |||||||||||||| ||||||| ||| |||||||| || |||  ||||||||||| ||    
T  43442310 aagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgc 43442211  T
Q  186 caac 189  Q
    ||||    
T  43442210 caac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 18596005 - 18596075
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    ||||||| |||||| ||||||| ||| | ||||||||| |||| ||||||||||||  ||| |||||||||    
T  18596005 cgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 26598578 - 26598524
Alignment:
Q  146 gaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||| |||| ||| ||||||| ||||||||||||||||| |||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggtt 26598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 37148096 - 37148030
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||| ||||||| ||| |||| |||||| || ||||||||||||| | ||| |||||||    
T  37148096 aacctgagaccttgaggaggagcacactcacaggtctcaggtcaataccactaagtcaatccaagtg 37148030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 15641808 - 15641865
Alignment:
Q  140 ctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||||| | ||| |||||||||||||||||||||||||   |||||||| ||||||    
T  15641808 ctcgaggacgagcacactcccaggtcccaagtcaataccatcgggccaaccaaagtgg 15641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 30735089 - 30735146
Alignment:
Q  143 gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| ||| |||| |||||  ||||||||||| |||||| |||||||||||||||    
T  30735089 gaggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggtt 30735146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 31669029 - 31669101
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||| |||||| ||| ||| ||||||||| |||||||||| ||| ||||  || |||||||||||||||||    
T  31669029 cgaacctaagaccttgag-aggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgggtta 31669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 84938 - 84854
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaag 170  Q
    ||||||||||||||||||||| | | |  |||  ||||||| ||||| |||||||| ||||||| ||| |||||||| |||||||    
T  84938 aagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaag 84854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 27840981 - 27841057
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccag 162  Q
    ||||||||||||||||||| | |||||| ||| || ||||| |||||| |||| |||||||||| ||| ||| ||||    
T  27840981 aagaagctaaattagcccatccaaattaacaccagagagaatcgaaccggagatctcgaggaggagcacacttccag 27841057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 43591021 - 43590906
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||| ||||  |||||||||||| |||||||||||| | ||||||| ||| ||||||| |||||||| ||||||||| ||||    
T  43591021 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 43590922  T
Q  186 caacccaagtgggtta 201  Q
    |||||||| |||||||    
T  43590921 caacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 48772052 - 48771937
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||   ||| |||| || ||||||||||||||| |||||| ||| |||||||| ||||||| ||||||||| | ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  48771952 caacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 30579449 - 30579335
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||| || || || |||||||||||||| ||||||| | | ||||||||||| |||| ||||||||| ||||    
T  30579449 aagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggc 30579350  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  30579349 caacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 26459414 - 26459487
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26459414 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 41519227 - 41519335
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||| || ||||| |||||||||||||| ||||||| ||| ||||| |  ||||||||||||||||||||||    
T  41519227 aagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggc 41519325  T
Q  186 caacccaagt 195  Q
    ||||||||||    
T  41519326 caacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 42712069 - 42711962
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||||||||||||||||  |||||||||||| ||||| |||||||| ||||||| ||| ||||||| || |||||  |||||||||| |||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaa 42711970  T
Q  189 cccaagtg 196  Q
    ||||||||    
T  42711969 cccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 39631916 - 39631842
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||||||||||| ||||||| ||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  39631916 cgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 22760935 - 22760862
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  22760935 cgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 23552190 - 23552118
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  23552190 cgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 15905636 - 15905746
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| |||||| |||||  || ||||||||| ||||||||||||||  |||||| ||| |||||||||||||||| ||||||| | ||||    
T  15905636 aagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccaggc 15905734  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  15905735 caacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 23301564 - 23301678
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||| ||||  |||||| |||||  ||||| | ||| ||||||||| |||||| ||| ||||||| |||||||||||||||||| ||||    
T  23301564 aagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggc 23301663  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  23301664 caacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 7801252 - 7801179
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| || |||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7801252 cgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 30442560 - 30442487
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  30442560 cgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 20335835 - 20335907
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||| ||| ||||||| |||||||| ||||||| |||| ||||||||||||||||    
T  20335835 cgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 41487473 - 41487362
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  |||  || |||| |||||||||||||| ||||||    | ||||||| |||||||| ||||||||| ||||    
T  41487473 aagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggaga---acactcccaagtcccaagccaataccaccaggc 41487377  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  41487376 caacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 42836008 - 42836080
Alignment:
Q  131 acctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatt 203  Q
    ||||||| ||| ||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatt 42836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 43215256 - 43215184
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| ||||| |||||||||| |||||||||||| ||||||||||||||||    
T  43215256 cgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 15137667 - 15137552
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| ||||||||||||||| |||||  ||| || ||||| | |||||||||||| ||||||| ||| ||||| |  |||||||||| |||||| ||||    
T  15137667 aagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggc 15137568  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  15137567 caacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||| | ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 2446422 - 2446308
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||||||||   |||  | ||||| ||||| ||||| |||||||||| ||| ||||||| |||||||| ||||||||  || |    
T  2446422 aagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagac 2446323  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  2446322 caacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 11720922 - 11721036
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||| ||||||| |||| |||| ||||  |||||| ||| | |||||||||||||| ||||||||| ||||    
T  11720922 aagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccaggc 11721021  T
Q  186 caacccaagtgggtt 200  Q
    ||||| |||| ||||    
T  11721022 caaccgaagttggtt 11721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 17040974 - 17041088
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||  |||||| |||||  |||| | ||||| |||||||||||||| ||||||| ||| ||| |||| ||||||| |||| ||||||| |    
T  17040974 aagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagac 17041073  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  17041074 caacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 18056743 - 18056851
Alignment:
Q  93 ctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccc 191  Q
    ||||||||||||||| |||||| |||  ||||||| ||||||||||||||  |||||| ||| ||||| | | |||||||||||||||| || | |||||    
T  18056743 ctaaattagcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaaccc 18056842  T
Q  192 aagtgggtt 200  Q
    |||||||||    
T  18056843 aagtgggtt 18056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 38374563 - 38374675
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcca 187  Q
    ||||||||| |||||||||||||||  |||  ||||||| ||||||| |||||| ||||||| ||| ||||  |||||||||| ||| ||||| | ||||    
T  38374563 gaagctaaactagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgcca 38374662  T
Q  188 acccaagtgggtt 200  Q
    |||||||||||||    
T  38374663 acccaagtgggtt 38374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 45709712 - 45709784
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||| ||| |||| ||| |||||||  ||||||||||||||||||||| ||||||    
T  45709712 cgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 18363766 - 18363692
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttattt 204  Q
    |||||||||||| ||||||| ||| |||||||  || |||| | |||||||||||||||||||||||||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttattt 18363692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 19553567 - 19553454
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| |||||||||||||||   ||  |||||||  |||||| |||||| ||||||| ||| |||||||||||| ||| ||||||||| ||||    
T  19553567 aagaagctaaagtagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggtcc-aagccaataccaccaggc 19553469  T
Q  186 caacccaagtgggtt 200  Q
    ||||||||| |||||    
T  19553468 caacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 26199623 - 26199509
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| | ||||||||||  |  ||||||||| ||||||||||| ||| | |||| | | | || ||||||||||| ||||||||||||||    
T  26199623 aagaagctaaattaactcacctaaattggctgtagggagaatcgaacctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggc 26199524  T
Q  186 caacccaagtgggtt 200  Q
    |||| ||||||||||    
T  26199523 caactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 31835306 - 31835192
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| |||||| || |||||  ||| ||||| || |||||||||||||| ||||||| ||| ||||| ||  |||||| ||| ||||| ||||    
T  31835306 aagaagctaaactagcccgccaaaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggc 31835207  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  31835206 caacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 33181172 - 33181286
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| ||||||||||| || |||  || ||| ||||||| |||||||| | |||||||||||     
T  33181172 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagatcttgagttggagcacactcccaagtcccaagcctataccactaggg 33181271  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  33181272 caacccaaatgggtt 33181286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 7499918 - 7499995
Alignment:
Q  119 tagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagt 195  Q
    ||||||||| ||||||||||||||||| |||| ||| |||| ||||||||||| ||||| |||||||| |||||||||    
T  7499918 tagggagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcactaggctaacccaagt 7499995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 24513911 - 24513795
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||||||||| |||||  ||  || || || ||||||||||||||| |||||  | | |||||||  || |||| ||||||||||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  186 caacccaagtgggttat 202  Q
    |||||||||||||||||    
T  24513811 caacccaagtgggttat 24513795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 5579240 - 5579311
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||| ||||||| ||| ||||| |||||||||| ||| ||||| ||| ||||||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtta 5579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 37473728 - 37473645
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaa 169  Q
    |||||||||||||| ||||||||||||  || ||||||||| ||||||||||||||| |||||| ||| ||||| || ||||||    
T  37473728 aagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcctagatcccaa 37473645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 21877880 - 21877814
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaag 194  Q
    ||||| ||||||||  |||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  21877880 cgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 25132341 - 25132434
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||||||||||| |||||| || | ||||||| ||||||||||||||  || ||| ||| ||||| |||||| |||||||||||||    
T  25132341 aagaagctaaattagcccacccaaattagcatt-gggagaatcgaacctgagaccttaagaaggagcacactcctaggtcctaagtcaataccac 25132434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 26703239 - 26703149
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    ||||| |||||||||||||||||||||  || |||||| ||  ||||||||||||||||| ||| ||| |||||||| ||||||| |||||    
T  26703239 aagaatctaaattagcccacctaaattggcattagggataaatgaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 33869449 - 33869523
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||| ||||||| ||| ||| ||| ||| ||||||| |||| |||||| ||||||||||||||||||||||||    
T  33869449 cgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttat 33869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 36803646 - 36803696
Alignment:
Q  143 gaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  36803646 gaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaa 36803696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 5668533 - 5668626
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaatacca 179  Q
    |||||||||||||||||||| ||||||| | |  | ||||| ||| |||||||||||||||||| ||| ||| ||| |||||||| ||||||||    
T  5668533 aagaagctaaattagcccacataaattaactccggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 35513580 - 35513467
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| |||||||||||| ||   | || || ||||| |||||  ||||||||| ||| |||| || ||||||||  |||||||||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggc 35513481  T
Q  186 caacccaagtgggt 199  Q
    |||||||| |||||    
T  35513480 caacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 39499750 - 39499795
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  39499750 actcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 43663099 - 43663168
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    ||||||||||| ||||||||||  ||  |||| |||||||||||||||||||  ||||||||||||||||    
T  43663099 cgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 45976943 - 45976996
Alignment:
Q  144 aggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  45976943 aggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 21558242 - 21558134
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||||||||  ||| || ||||| |||||||||||||| ||||||| ||| | ||  |||| |||||||||||| || | ||    
T  21558242 aagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatactaccaagc 21558143  T
Q  186 caacccaag 194  Q
    |||| ||||    
T  21558142 caacacaag 21558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 25590683 - 25590611
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||||||||||||||| ||| |||||||| || |||| ||||||||  ||| |||||||||||||||    
T  25590683 cgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 25956298 - 25956369
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||| |||||| ||| ||| ||| ||||| |||||||||| |||||||||||||||||||||| |||||||    
T  25956298 gaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtta 25956369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 35119455 - 35119383
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| | || ||||| | ||| || ||||| |||||||||||||||||||||||||||||| ||||||    
T  35119455 cgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 4566434 - 4566501
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||||||||| ||| |||   | ||||| |||||| ||||||||||||||||||||||||||||||    
T  4566434 aacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 27776243 - 27776172
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||| ||||||||| ||| |||| || ||||||||   ||||||| |||||||||||||||||||    
T  27776243 gaacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 37085511 - 37085618
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| ||||||||||||| ||||||   | | ||||||| ||||||||| |||||||||| | ||| |||||||  ||||||| ||||||||| | ||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgc 37085610  T
Q  186 caacccaa 193  Q
    ||||||||    
T  37085611 caacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 5273596 - 5273666
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||| ||||||| ||| ||||  |||||||||| ||| ||||| |||||||||||||||||||    
T  5273596 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 17113867 - 17113793
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| |||||||| ||||||  ||| |||||||||| | ||| |||||| ||||||||| ||||||||||||||    
T  17113867 cgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggttat 17113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 45559245 - 45559199
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  45559245 actccaaggttccaagccaataccactaggccaacccaagtgggtta 45559199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 7744118 - 7744186
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||||||| ||||||| ||| | |||||| ||| ||| | ||||||||||||||||| |||||||    
T  7744118 aacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14058325 - 14058253
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||| | ||| |||| ||||| ||||| ||||||||| |||||||| |||| |||||    
T  14058325 cgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14058253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14368353 - 14368281
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||| | ||| |||| ||||| ||||| ||||||||| |||||||| |||| |||||    
T  14368353 cgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14368281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 22927521 - 22927477
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggt 199  Q
    ||||| || |||||||| |||||||||||||||||||||||||||    
T  22927521 actcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 23945933 - 23945861
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||| | |||| ||| | || ||||| | |||||||||||| |||| |||||||||||||||    
T  23945933 cgaacctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggtt 23945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 25655232 - 25655304
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| |||| |||||||  || |||| ||| |||||||||||||||||||  |||||||| |||||||    
T  25655232 cgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 3280495 - 3280562
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||| ||||||| ||| |||| | ||||||||| ||||||||| | | ||||||||||||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtta 3280562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 18011356 - 18011430
Alignment:
Q  131 acctgagacctcgaggaggcgcagactcccaggtcccaagtcaat-accactaggccaacccaagtgggttattt 204  Q
    ||||||||||||  ||||| ||| |||| |||||| |||| |||| |||| ||||||||||||| ||||||||||    
T  18011356 acctgagacctcatggaggagcacactctcaggtctcaagccaattaccattaggccaacccaactgggttattt 18011430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  132 cctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||| | ||||||| ||| |||||||| |||| || ||||||||  |||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 2962531 - 2962459
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||| || ||||||| ||| |||| ||||| ||||  |||||||||||| |||| ||||||||||||    
T  2962531 cgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactagaccaa-ccaagtgggtta 2962459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 22932742 - 22932787
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||    
T  22932742 actcccaggtcccaagccaataccaccataccaacccaagtgggtt 22932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 48079754 - 48079653
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaa-taccactaggcca 187  Q
    |||||||||||||||||  |||||| |||  | ||||| | |||||||||||||||| |||  || || ||||||||||||| ||| ||||| |||||||    
T  48079754 aagctaaattagcccactcaaattagcaccggagagaatcaaacctgagacctcgagcaggaccacacacccaggtcccaagccaattaccagtaggcca 48079655  T
Q  188 ac 189  Q
    ||    
T  48079654 ac 48079653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 3968651 - 3968711
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    ||||||||| ||||||| ||| ||||  |||||||||||||| ||||| | ||||||||||    
T  3968651 ctgagaccttgaggaggagcacactcgaaggtcccaagtcaacaccaccatgccaacccaa 3968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 8108653 - 8108601
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||||| |||||| ||  |||||||  |||||||||||||||||    
T  8108653 cgaacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccac 8108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 22035512 - 22035428
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaag 170  Q
    ||||||||||||||| |||| ||||||  |||  | ||||| |||||||| | ||||||||||| ||| |||| |||||||||||    
T  22035512 aagaagctaaattagtccacttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaag 22035428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 23595797 - 23595733
Alignment:
Q  132 cctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    ||||| |||| ||||||| ||| ||||| || || |||||||||||||| || ||||||||||||    
T  23595797 cctgataccttgaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtg 23595733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 24107346 - 24107302
Alignment:
Q  156 ctcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| || |||||||||| ||||| |||||||||||||||||    
T  24107346 ctcccagatctcaagtcaatatcactatgccaacccaagtgggtt 24107302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 28236592 - 28236636
Alignment:
Q  135 gagacctcgaggaggcgcagactcccaggtcccaagtcaatacca 179  Q
    ||||||||||||||| ||  |||||||||||||||| ||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 29385749 - 29385817
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||||||| ||||||| ||| ||||| | |||||||| ||| ||||   ||||||||||||||||    
T  29385749 aacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 41976001 - 41975945
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctc 142  Q
    |||||||||||||||||||| ||||||  |||||| ||||| ||||| |||||||||    
T  41976001 aagaagctaaattagcccacttaaattgacactagagagaatcgaacttgagacctc 41975945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||| |||||  |||   |||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 7949416 - 7949530
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||| || ||||| |||||||||||||| ||||||| ||| ||||| |||||||||| ||||||| ||||||    
T  7949416 aagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggc 7949515  T
Q  186 caacccaagtgggtt 200  Q
    || ||||||||||||    
T  7949516 cagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 37274421 - 37274537
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaa-taccactagg 184  Q
    |||||||||||||||||||| ||||||| ||| || ||||| ||||||| |||||| ||||||| ||| |||||||||||||||| ||| ||| ||||||    
T  37274421 aagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactagg 37274520  T
Q  185 ccaacccaagtgggtta 201  Q
    |||||||||||||||||    
T  37274521 ccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 37720176 - 37720290
Alignment:
Q  87 aagaagctaaattagcccacctaaatt-atcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactagg 184  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||| ||||| ||||||| ||| |||||||||||||||| ||||| ||| |||    
T  37720176 aagaagctaaattagcccacctaaattgatccct-gggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccagg 37720274  T
Q  185 ccaacccaagtgggtt 200  Q
    ||||||||||||||||    
T  37720275 ccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 37109355 - 37109428
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37109355 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 19238542 - 19238654
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||| |||||   ||  ||||||| |||||| ||||||||||||||| ||| ||||||| |||||||| ||||||||| |||||||    
T  19238542 aagctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 19238641  T
Q  189 cccaagtgggtta 201  Q
    |||||||||||||    
T  19238642 cccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 28635810 - 28635694
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||| || ||||| ||||||| ||||||| |||||| ||| |||||||| |||||||||| |||||| |||     
T  28635810 aagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccagga 28635711  T
Q  186 caacccaagtgggttat 202  Q
    |||||||||||||||||    
T  28635710 caacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 39509181 - 39509070
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||| ||| |||||||| ||||||| || |||||  || ||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaa 39509082  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  39509081 cccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 8030166 - 8030280
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| ||||| |||||||| ||||||| ||| ||||||| |||||||| | |||||||||||     
T  8030166 aagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 8030265  T
Q  186 caacccaagtgggtt 200  Q
    ||| |||||||||||    
T  8030266 caatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 47044789 - 47044715
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  47044789 cgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 13901856 - 13901746
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||||||||| || |||  ||||  |||| ||||||||| ||||||  || ||||||||||| |||| |||||||||||| |    
T  13901856 aagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagac 13901757  T
Q  186 caacccaagtg 196  Q
    |||||||||||    
T  13901756 caacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 21660106 - 21660220
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| | |||||||||  |||||| || || ||||| |||||||||||||| | ||| |||||||| || |||||||||||||| || |    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||| ||||    
T  21660206 caacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 21668870 - 21668984
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| | |||||||||  |||||| || || ||||| |||||||||||||| | ||| |||||||| || |||||||||||||| || |    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||| ||||    
T  21668970 caacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 5795370 - 5795486
Alignment:
Q  87 aagaagctaaattagccc-acctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactagg 184  Q
    ||||||||||| |||||| ||| |||||  |||| ||||||| | |||||||||||| ||||||| ||| ||||| |||| ||||||||| ||||| ||     
T  5795370 aagaagctaaactagccccacccaaattggcactggggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccaga 5795469  T
Q  185 ccaacccaagtgggtta 201  Q
    |||||||||||||||||    
T  5795470 ccaacccaagtgggtta 5795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 24827897 - 24827825
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||||  | |||||| |||||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggtt 24827825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 7292760 - 7292871
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| || ||| |  |||||  |||||| ||||| |||||||||||| | ||||||| ||| |||||||||| ||||| |||||||||||| |    
T  7292760 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagac 7292859  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  7292860 caacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 51948551 - 51948480
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||||||||||| ||| ||||| || |||||||||||||| || ||| |||||||||||||||    
T  51948551 gaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 9241029 - 9241103
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||||| |||||||||| ||| ||| ||| |||| ||||||| ||||||||| |||||||||||||||||||||    
T  9241029 cgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 31826723 - 31826605
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||||||||| |||||  |||||  | ||| ||||| |||||||| ||||||| ||| |||| ||  ||||||| | |||||||||||     
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactaggg 31826624  T
Q  186 caacccaagtgggttattt 204  Q
    |||||||||||||||||||    
T  31826623 caacccaagtgggttattt 31826605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 46545783 - 46545709
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    |||| |||||| || ||||||| ||| |||| |||||| |||| |||||||||||||||||||||||||||||||    
T  46545783 cgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||  | | ||| ||||| ||||| || |||| || ||| |||||||| ||||||| ||||||||| ||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 9936965 - 9937038
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||| || ||||||||| ||| ||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  9936965 cgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtta 9937038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 30938181 - 30938278
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactag 183  Q
    ||||||||||| || ||||||||||||  || | ||||||| |||||||||||||||||||||| ||| ||||| || ||||||  ||||||||||||    
T  30938181 aagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 31759662 - 31759735
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||| ||||||||| ||||||| ||| ||||||| |||||||| ||||||||||||  ||||||||||||||||    
T  31759662 cgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 23378070 - 23377974
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccacta 182  Q
    ||||||||||| |||||| |  |||||  |||||| ||||| |||||||||||||| ||||||| ||| |||||||||||||||| ||||| |||||    
T  23378070 aagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 2622399 - 2622475
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaag----tcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| | ||||||| ||| ||||||||||||||||    | ||||||||||||||||||||||||||||    
T  2622399 cgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 46295211 - 46295096
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||  |||  ||||||| |||||||||||||| ||||||| ||| ||||| | |||||||| ||| || || || |    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagac 46295112  T
Q  186 caacccaagtgggtta 201  Q
    ||||| ||||||||||    
T  46295111 caacctaagtgggtta 46295096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 13015538 - 13015444
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactag 183  Q
    ||||||||||| ||||||||||||  |||  | ||||| ||||| |||||| ||||||||| ||| ||||||| |||||||| ||||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 17618355 - 17618281
Alignment:
Q  126 aacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| |||||||||||||||| ||| ||||||||||| |||| ||||||||| | |||  ||||||||||||    
T  17618355 aacgaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 51954228 - 51954134
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||||||||||| |||||  |||  | || || | |||||||||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  51954228 aagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccac 51954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 1730498 - 1730567
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||||| | || |||| ||| |||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  1730498 ctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggttat 1730567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 16581764 - 16581711
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccacta 182  Q
    ||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  16581764 gaacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 27965541 - 27965586
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  27965541 actcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 37443813 - 37443701
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||||||||| ||||||  ||| || || || ||||| ||| |||||||||||    | |||||||| ||||||| |||||||||||||     
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagt---acactcccagatcccaagccaataccactaggt 37443717  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  37443716 caacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 38869840 - 38869783
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||| ||||||||||||||    
T  38869840 cgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 49576898 - 49576963
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||| ||||||||| ||||||||||||    
T  49576898 cgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 4185201 - 4185093
Alignment:
Q  93 ctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccc 191  Q
    |||||||||||||||||||||  |||||||||||| ||| | ||||||||||||||||  || ||||  | |||||||  ||||||||| ||  |||||     
T  4185201 ctaaattagcccacctaaattgacactagggagaatcgatcttgagacctcgaggaggatcacactcttaagtcccaaaccaataccaccagatcaacca 4185102  T
Q  192 aagtgggtt 200  Q
    |||||||||    
T  4185101 aagtgggtt 4185093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 19229173 - 19229284
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||| |||||||| |||||   || |||||||| |||||||||||||||||||||| ||| | ||  || ||||| | ||||||||| |||||||    
T  19229173 aagctaaataagcccacccaaattggtaccagggagaatcgaacctgagacctcgaggaggagcacattctaag-tcccaggccaataccaccaggccaa 19229271  T
Q  189 cccaagtgggtta 201  Q
    ||||| |||||||    
T  19229272 cccaaatgggtta 19229284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 19680792 - 19680864
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| |||||| ||||| | ||| ||||||| ||||||||  |||||||||||||||| |||||||||||    
T  19680792 cgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 40283948 - 40284060
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| ||||||||||||||||||||  ||| | | |||| | ||||| |||||| ||||||  ||| ||||||| |||||||| ||||||||  | ||    
T  40283948 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgc 40284047  T
Q  186 caacccaagtggg 198  Q
    |||||||||||||    
T  40284048 caacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 4483306 - 4483377
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||| |||||||  ||||||| |||||||||||||||||     |||||||||||||||||||    
T  4483306 gaacctgagaccttgaggaggatcagactctcaggtcccaagtcaatattgacaggccaacccaagtgggtt 4483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 13496355 - 13496240
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||| || | ||||| | || ||  |||| |||||  |||||||||| ||||  || |||| || |||||||||||||||||| | ||    
T  13496355 aagaagctaaattagctcatccaaattgttaccagaaagaatcgaacacgagacctcgaagaggaacacactcacatgtcccaagtcaataccaccatgc 13496256  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  13496255 caacccaagtgggtta 13496240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 29195208 - 29195095
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||| ||| |||||  || ||| ||||| ||||| || ||||| ||| ||| ||| ||||| |||||||||| ||| ||||| ||||    
T  29195208 aagaagctaaactagccaaccaaaattggcattagagagaatcgaacttgcgaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggc 29195110  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  29195109 caacccaagtgggtt 29195095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 49262646 - 49262740
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||| |||||||||||||||||||||  |||| ||||||| ||||||||||||||| |  ||| ||| |||| || ||||||||  ||||||||    
T  49262646 aagaaactaaattagcccacctaaattggcactggggagaatcgaacctgagacctcaacaaggagcacactctcaagtcccaagcgaataccac 49262740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 2185036 - 2185109
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaaccc-aagtgggtt 200  Q
    |||||||||||| | ||| ||| ||| |||||||||| ||||| || ||||||||||||||||| |||||||||    
T  2185036 cgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggccaacccgaagtgggtt 2185109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 41346967 - 41347036
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||||||||| ||||||||| ||| |||||||| || |||  ||||||||  ||||||||||||||||    
T  41346967 cgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 43623411 - 43623516
Alignment:
Q  92 gctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacc 190  Q
    |||||| |||||||||||||||   ||||  ||||| |||||||||||| || |||||| ||| |||||| | || |||||||||| |||||| | ||||    
T  43623411 gctaaactagcccacctaaattgctactatagagaatcgaacctgagacttcaaggaggagcacactccctgatctcaagtcaatatcactagactaacc 43623510  T
Q  191 caagtg 196  Q
    ||||||    
T  43623511 caagtg 43623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 8325344 - 8325456
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||| ||||||||| |||||  |||  ||||||| ||||||| |||||| ||||| | ||| ||||| ||||| |||| ||| |||||  | ||||    
T  8325344 aagctaaactagcccacccaaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaa 8325443  T
Q  189 cccaagtgggtta 201  Q
    |||||||||||||    
T  8325444 cccaagtgggtta 8325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 12798756 - 12798684
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| |||||||||||  ||| |||||||| || |||  |||||||||| || |||||||||||||||    
T  12798756 cgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtt 12798684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 22096577 - 22096629
Alignment:
Q  94 taaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgag 145  Q
    ||||||||||||| ||||||  |||||||||||| ||||||||||||||||||    
T  22096577 taaattagcccacttaaattggcactagggagaatcgaacctgagacctcgag 22096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 45061013 - 45060977
Alignment:
Q  165 cccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||||||| ||||||||||||||||    
T  45061013 cccaagtcaataccactaggtcaacccaagtgggtta 45060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 47386753 - 47386809
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctc 142  Q
    |||||||||||||||||||||||||||  |||||| |||||  ||||||||||||||    
T  47386753 aagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctc 47386809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 21344927 - 21344817
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||| ||| |||||||||||||||  |||| |||||||  |||| |||||||| ||| ||| ||| ||||| |||||||||| ||| | ||  |||||||    
T  21344927 aagccaaactagcccacctaaattgacactggggagaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaa 21344829  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  21344828 cccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 40285737 - 40285622
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||| || ||||||||||||| || |||  |||| ||||| | ||||||| | |||| ||| |||||||| | |||| |||||||||| | ||    
T  40285737 aagaagttaaactaacccacctaaattaacattagaaagaatcgaactttagacctcaaagaggagcacactcccagattccaaatcaataccaccatgc 40285638  T
Q  186 caacccaagtgggtta 201  Q
    |||| |||||||||||    
T  40285637 caactcaagtgggtta 40285622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 41683863 - 41683752
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||| ||||||||||||  ||||||  ||||  |||| ||| || | ||| ||| ||| |||| ||||| ||||| |||||||||||||     
T  41683863 aagaaactaaattaacccacctaaattggcactagaaagaattgaacgtgaaactttgagaaggagcacactctcaggttccaagccaataccactaggt 41683764  T
Q  186 caacccaagtgg 197  Q
    ||||||||||||    
T  41683763 caacccaagtgg 41683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 4249247 - 4249177
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| ||||||| ||| ||||| |  ||||||| | ||||||||||||||| | |||||||||    
T  4249247 aacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 15180786 - 15180740
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||| |||||||||||| |||| | ||||||||||    
T  15180786 actcccaggtcccaagccaataccactagaccaatctaagtgggtta 15180740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 37980110 - 37980219
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||| |||||| |  |||||  |||| ||||||| |||||||||||||| ||| ||| ||| ||||| |||||||||| ||| | ||| ||||    
T  37980110 aagaagccaaactagcccgctgaaattgacactggggagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggc 37980208  T
Q  186 caacccaagtg 196  Q
    |||||||||||    
T  37980209 caacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 9693460 - 9693529
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcaga 155  Q
    |||||| |||||||||||||| |||||  |||||| | ||| |||||||||||||| ||||||| |||||    
T  9693460 aagaaggtaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcaga 9693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 56410031 - 56409951
Alignment:
Q  120 agggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||| |||||||||||||| ||| ||| ||| ||||| |||||||||| ||| | ||| |||||| ||||||||||||    
T  56410031 agggagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgggtt 56409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 7539662 - 7539602
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||| ||| ||| ||| |||||||| ||| || ||||||||||||| ||||    
T  7539662 cgaacctgagaccttgagaaggagcatactcccagatccaaaatcaataccactagaccaa 7539602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 11592157 - 11592209
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||| |||||| ||||||| ||| |||| ||||||||||| |||||||||    
T  11592157 cgaacctaagacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 26605674 - 26605790
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||| |||  ||| || |||||||||||| ||||| ||| | || ||| ||| ||| ||||| | | ||||| |||||||||| ||||    
T  26605674 aagaagctaaattagcacacacaaactaacactagggagaatcgaacttgaaaacttgagaaggagcacactcctaagacccaactcaataccaccaggc 26605773  T
Q  186 caacccaagtgggttat 202  Q
     ||| ||| ||||||||    
T  26605774 taactcaaatgggttat 26605790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 15285 - 15399
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||||||||  ||   | ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||| || |    
T  15285 aagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 15384  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  15385 caacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 44126509 - 44126396
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||| |||||||||  |||||| ||||| | || ||||||||||| ||||| ||| |||||||||||||| ||||||||||| ||||    
T  44126509 aagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggc 44126410  T
Q  186 caacccaagtgggt 199  Q
    ||||||||||||||    
T  44126409 caacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 52116743 - 52116858
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||| ||||  ||||||||||||  ||||||||||| | ||||||| ||| ||||||| |||||||| ||||||||| ||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  186 caacccaagtgggtta 201  Q
    |||||||| |||||||    
T  52116843 caacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 50901695 - 50901580
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaat-accactagg 184  Q
    |||||||||||||||||||||||||||  |||| | ||||| ||||  |||||||||||||||| ||| ||| |||||||||||| |||| |||||||||    
T  50901695 aagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactagg 50901597  T
Q  185 ccaacccaagtgggtta 201  Q
    |||||||||||||||||    
T  50901596 ccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 6122908 - 6122794
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| | ||| |||||||||||||| ||||||| ||| ||||||| |||||||| | |||||||||||     
T  6122908 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 6122809  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  6122808 caacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 9165200 - 9165273
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||||||||| | ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 17745219 - 17745333
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| || |||||||||  ||| || ||||| ||||| |||||||||||||||| ||| || | ||||||||||| ||||||||||||||    
T  17745219 aagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggc 17745317  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||| ||||    
T  17745318 caacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 10526937 - 10526819
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| |||||| |||||  | | || ||||| |||| ||||||||| ||||||| ||| |||||||||||||||| |||||||||| | |    
T  10526937 aagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggac 10526838  T
Q  186 caacccaagtgggttattt 204  Q
    |||||||| ||||||||||    
T  10526837 caacccaaatgggttattt 10526819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 21547442 - 21547556
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||| |||||||||||||||  ||  || ||||| ||||||||| |||||||||||| |||  |||||| |||||||| ||||||||||||||    
T  21547442 aagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggc 21547541  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||| ||||    
T  21547542 caacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 25494031 - 25494145
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||||||  ||| ||||| || ||||||| |||||||||||||     
T  25494031 aagaagttaaattagcccatctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaataccactaggt 25494130  T
Q  186 caacccaagtgggtt 200  Q
    |||  ||||||||||    
T  25494131 caattcaagtgggtt 25494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 31794226 - 31794340
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  ||| || | ||| |||||   |||||| ||||||| ||| ||||||| |||||||| ||||||||||||||    
T  31794226 aagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactaggc 31794325  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  31794326 caacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 36371542 - 36371470
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||| |||||| ||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  36371542 cgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 40257470 - 40257399
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| |||||||||||||||| ||| ||||||||||| |||| ||||||||| |||||||||||||||||||    
T  40257470 gaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 51814605 - 51814494
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||| |||||  |||  | ||||| |||||||||||||| ||||||| ||| |||| ||| || |||||||||||||  |||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  189 cccaagtgggtt 200  Q
    ||||||||||||    
T  51814505 cccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 25297886 - 25297772
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||||||||  | |  | ||||| | ||||| |||||||||||||| ||| |||| ||| ||| |||||||||||||||| |    
T  25297886 aagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagac 25297787  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  25297786 caacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 33700777 - 33700847
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    |||||||||||||| ||||||| ||| |||||||| | ||||| |||||||||||||||||||||||||||    
T  33700777 cgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 16169973 - 16170054
Alignment:
Q  120 agggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||| ||||||||| |||| |||||||  || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  16169973 agggagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 4566620 - 4566548
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||  ||||||| ||| |||||||||| ||||| ||||| |||||||||||||||||||||||    
T  4566620 cgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 1094639 - 1094521
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| ||||||||||||||||||||  |||  | ||||| ||||  |||||||||| ||||| ||| |||| ||||| ||||||||||||||  |  |    
T  1094639 aagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaacaaac 1094540  T
Q  186 caacccaagtgggttattt 204  Q
    |||||||||||||||||||    
T  1094539 caacccaagtgggttattt 1094521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 6650709 - 6650595
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||  |||||||||||  ||| || ||||| |||||||||||| | ||||||| ||| |||||| | ||||||| ||||||||||||||    
T  6650709 aagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggc 6650610  T
Q  186 caacccaagtgggtt 200  Q
    ||||| || ||||||    
T  6650609 caacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 12587383 - 12587294
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||||||||||||||||  |||  | ||||| |||||||||||||||||||||| ||| |||| ||| |||||||||||||    
T  12587383 aagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 24047064 - 24047174
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||||| |||||||||  |||| ||||||| ||||| ||| |||||||||||| ||| ||||||| ||| |||| ||||||||  || |    
T  24047064 aagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgagac 24047163  T
Q  186 caacccaagtg 196  Q
    |||||||||||    
T  24047164 caacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 36124947 - 36124853
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    |||||||||||||||||||||||||||  | ||||| || | | ||| ||||||||| |||||| ||| |||| |||||||||||||||||||||    
T  36124947 aagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 15786324 - 15786393
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||| |||||| ||||| |||||||||||||    
T  15786324 cgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 8177186 - 8177258
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| |||| ||||||| ||| |||||||| ||||||| |||||||||||||||||| ||| ||||||    
T  8177186 cgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 8904486 - 8904414
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||| ||||||| ||| |||| ||  |||||||||||||| ||||||||||||||||||||||    
T  8904486 cgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 19528331 - 19528403
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| ||||  || ||||||| ||||||||| |||||||||||||||||||    
T  19528331 cgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 29817789 - 29817679
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| |||||||||||  | ||| |||||   |||||||||| || || |||| ||| |||| |||||| |||||||||| ||| ||||    
T  29817789 aagaagctaaattagtccacctaaattggccctatggagattagaacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggc 29817690  T
Q  186 caacccaagtg 196  Q
    |||||||||||    
T  29817689 caacccaagtg 29817679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 1690081 - 1690154
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||| ||||||||| ||||||  ||||||||||||||||||| ||||||||| || ||||  |||||||||||    
T  1690081 cgaacttgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaattcaagtgggtta 1690154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 952623 - 952511
Alignment:
Q  89 gaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcca 187  Q
    |||||||||||| ||||||||||||  ||   ||||||| | |||||||||| | ||||| | ||| |||||||||||||||| ||| ||||| || |||    
T  952623 gaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagacca 952524  T
Q  188 acccaagtgggtt 200  Q
    || ||||||||||    
T  952523 actcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 2799934 - 2799862
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| |||||||| || |||| | ||||||||||||||| | |||||||||    
T  2799934 cgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 7743287 - 7743403
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||| ||||||||||||||||  || |   || || ||||| |||||||| |||||||  || |||||||  | || ||| |||||||||||||    
T  7743287 aagaagctaagttagcccacctaaattgacattttagataatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggc 7743386  T
Q  186 caacccaagtgggttat 202  Q
    |||||||||||||||||    
T  7743387 caacccaagtgggttat 7743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 12259332 - 12259260
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||| ||||||||| ||| |||||||  |||||||| |||| ||||| |||||||||||||||||    
T  12259332 cgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 24730495 - 24730387
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||||||||||||| |||||  |||   |||| | | |||||| ||||| || |||| ||| |||||||| || |||| |||||||||||||||||    
T  24730495 aagctaaattagcccacccaaattggcaccgaggaggatcaaacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaa 24730396  T
Q  189 cccaagtgg 197  Q
    |||||||||    
T  24730395 cccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 3800020 - 3799957
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggagg 149  Q
    |||||||||||||||||||||||||||  |||||| ||||| ||||||||| || |||||||||    
T  3800020 aagaagctaaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgaggagg 3799957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16893508 - 16893393
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  |||||  |||  | || || |||||||||||||||||||||| | | |||||||  || |||| ||||||||  |||     
T  16893508 aagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggt 16893409  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  16893408 caacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 17410345 - 17410238
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| |||||||||| | |||||||  ||  | |||||| ||||| ||||| ||||||||||  || |||||||| ||||||  ||||||||||||||    
T  17410345 aagaagttaaattagcctatctaaattggcataaaggagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggc 17410246  T
Q  186 caacccaa 193  Q
    ||||||||    
T  17410245 caacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 38978973 - 38979020
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  38978973 actcctaggtctcaagtcaataccactaggccaacccaaatgggttat 38979020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 41508898 - 41508831
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| ||||||| ||| |||||||| ||||||  || |||||| |||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 44961879 - 44961764
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||||| ||||| |||||||||||||  ||||||| ||| ||||  |  || ||||  ||||||||  | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  44961779 caacccaagtgggtta 44961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 2220086 - 2219972
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| |||||||||||||  ||||||  || | | ||||| |||||||||||||||||||||  ||| |||  ||||| ||||| ||||||||| ||      
T  2220086 aagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaa 2219987  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  2219986 caacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 9117191 - 9117113
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatttat 206  Q
    ||||||||||||||| |||||| ||| ||| |||| ||||||| | ||||||   ||||||||||| ||||||||||||    
T  9117191 cgaacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggttatttat 9117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 14787298 - 14787416
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| || ||||| ||||||   | ||| ||||| ||||||||| |||| ||||||   || |||| |||||| ||||||||||||||||||     
T  14787298 aagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccactaggt 14787397  T
Q  186 caacccaagtgggttattt 204  Q
    |||| |||||| |||||||    
T  14787398 caactcaagtgagttattt 14787416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 27476733 - 27476826
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaatacca 179  Q
    ||||||||||||||||||||||||||   ||| || ||||| | ||| ||||| |||||||||| ||| ||||| | |||||||| ||||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatacca 27476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 51703851 - 51703778
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||| || | ||||||| ||| |||||||| | ||||| |||||||||||| ||||||||| |||||||    
T  51703851 cgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 52336778 - 52336839
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaac 189  Q
    ||||||||||| ||  |||||| ||| |||||||| ||||||| ||||||||||||||||||    
T  52336778 cgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 1247185 - 1247117
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||||| ||||||| | | ||||||||||  ||| ||| |||||||| |||||||||||||    
T  1247185 cgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaacccaagtg 1247117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 15581147 - 15581218
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||  || ||| ||| ||||| |||||||||| ||| ||||| ||||||||||||||||||||    
T  15581147 gaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtta 15581218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 18459243 - 18459307
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaat-accactaggccaacccaagtgggt 199  Q
    ||||||| |||||| ||| ||||||| |||||||| |||| |||||||| |||||||||||||||    
T  18459243 agacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 30689083 - 30689011
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||| ||||||||| |||||| ||| |||||||||||| ||| ||||||||  ||| ||||| ||||||||||    
T  30689083 gaacatgagacctcaaggaggagcaaactcccaggtcctaagccaataccatcagggcaacctaagtgggtta 30689011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 31383802 - 31383854
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||| | |||||| ||| |||||||||||||||| |||||||||    
T  31383802 cgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 45266945 - 45266833
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    |||||||| ||||||| | |||||  |||  ||||||| |||||||||||||| ||||||| ||| ||||| | | |||||||||| |||   |||||||    
T  45266945 aagctaaactagcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaagtcaacaccgacaggccaa 45266846  T
Q  189 cccaagtgggtta 201  Q
    | |||||||||||    
T  45266845 ctcaagtgggtta 45266833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 7219880 - 7219975
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccact 181  Q
    ||||||||||||||| |||||||||||   |  |  ||||| |||||||||||| ||||||||| ||| |||| || |||||| ||||||||||||    
T  7219880 aagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactctcatgtcccaggtcaataccact 7219975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 9964552 - 9964441
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||| ||||||||||||| | |||||| |||| | || || | |||||||||| | ||||| | ||| |||||||| ||||||||||||| ||  ||||    
T  9964552 aagaaactaaattagcccatcaaaattagcactggagataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggc 9964453  T
Q  186 caacccaagtgg 197  Q
     |||||||||||    
T  9964452 taacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 11687629 - 11687700
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| |||||||||||  ||| ||| ||| |||| |||||||||||| ||||| | ||||||||||||||||    
T  11687629 gaacatgagacctcgaaaaggagcacacttccagatcccaagtcaatgccactggaccaacccaagtgggtt 11687700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 42983336 - 42983443
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| |||| ||||||  |||  | ||||| |||||||  |||||| ||||||  || |||||||| || |||||||||||||| | ||    
T  42983336 aagaagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgc 42983435  T
Q  186 caacccaa 193  Q
    ||||||||    
T  42983436 caacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 4825080 - 4824975
Alignment:
Q  91 agctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaac 189  Q
    ||||||||||||| ||| |||||| ||| | |||||| | |||||||||||| || |||| ||| ||||| |||||||||| ||| ||||  || |||||    
T  4825080 agctaaattagcc-acccaaattagcaccacggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaac 4824982  T
Q  190 ccaagtg 196  Q
    |||||||    
T  4824981 ccaagtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 21694515 - 21694446
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||   || ||||||| ||| |||| ||||||||| ||| |||||||||||||||    
T  21694515 cgaacctgagaccttgaggag---cacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 26232398 - 26232468
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatttat 206  Q
    ||||||| || ||| ||| |||||||| || |||| |||||||||||| ||||||||||||| || |||||    
T  26232398 agacctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtggattttttat 26232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 37047054 - 37046985
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||| ||| ||| ||| ||||| |||||||||| ||| ||||| || ||||||||||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 37046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 42787245 - 42787207
Alignment:
Q  163 gtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||||||||||||||| || |||||||    
T  42787245 gtcccaagtcaataccactaggccaacctaactgggtta 42787207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 45235389 - 45235455
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||| ||| ||||||| |||||||  ||||||||  || ||||||||||||||||    
T  45235389 tgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtt 45235455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 11063641 - 11063556
Alignment:
Q  116 cactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||| ||||| ||||||| |||||| |||||||  || |||  ||||||||||| ||||||||||||  |||||||| ||||||    
T  11063641 cactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgggtt 11063556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12370229 - 12370185
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaatacca 179  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||    
T  12370229 tgagacctcgaggaggagcacactcccaggtcccaag-caatacca 12370185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 27223092 - 27223185
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaatacca 179  Q
    ||||| |||||||| ||||| |||||||  | | ||||||| |||||||||||||| || || | ||| |||||||| ||| ||||||||||||    
T  27223092 aagaaactaaattaacccacttaaattagtattggggagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 35700020 - 35699959
Alignment:
Q  132 cctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||||||| ||| ||  ||| ||| |||| | ||||||||||||||||||||||||||||    
T  35700020 cctgagaccttgagcagaagcacacttccagtttccaagtcaataccactaggccaacccaa 35699959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 36428826 - 36428717
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||| ||| ||||||||| |||||  |||  ||||||| | ||| |||||||| ||||||| ||| ||||| |||| ||||| ||| |||||  |||    
T  36428826 aagaagcaaaactagcccacccaaattggcaccggggagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaacaccacccggc 36428727  T
Q  186 caacccaagt 195  Q
    ||||||||||    
T  36428726 caacccaagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 39012336 - 39012291
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||| ||| ||||||||||||||| |||||||||    
T  39012336 actccaaggtcccaagccaacaccactaggccaaccaaagtgggtt 39012291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 39966207 - 39966126
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtccc 167  Q
    ||||||||||| |||| |||| |||||| |||  ||||||| |||||||||||||| ||||||| | | ||||| |||||||    
T  39966207 aagaagctaaactagcacacccaaattagcaccggggagaaacgaacctgagaccttgaggaggagtacactccaaggtccc 39966126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 52029904 - 52029993
Alignment:
Q  93 ctaaattagcccacctaaattatca-ctagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||||| |||||  || |  ||||||| |||||||||||||| ||| ||| ||| ||||| ||||| ||||||||||||||    
T  52029904 ctaaattagcccacccaaattggcatcgggggagaatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaataccac 52029993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 3265996 - 3265948
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||| ||||||| ||| ||||||| || |||||||||||    
T  3265996 cgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 12234469 - 12234583
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| |||| |||||||  |||| | ||||| ||||||||||||||||||  || ||| |||||||||||||||||||||||||| ||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  186 caacccaagtgggtt 200  Q
    ||||| |||||||||    
T  12234569 caacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 21418584 - 21418470
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||| | ||||||| ||| ||||||| |||||||| ||||||||| ||||    
T  21418584 aagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggc 21418485  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  21418484 caacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 33549218 - 33549104
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||||| ||||||||||  ||   | ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||| || |    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  33549118 caacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 12188265 - 12188379
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| || ||| |  |||||  |||||| ||||| ||||| ||| |||| ||||||| ||| |||||||||||||||| ||||||||||||||    
T  12188265 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 12188364  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  12188365 caacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 24641152 - 24641266
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||| ||||||||||||||||||||  || |  |||||| ||||||| | |||||||||||| ||| |||||||| ||||||||||||||||| | ||    
T  24641152 aagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagc 24641251  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  24641252 caacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 34444917 - 34444809
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||  ||| || | | |||||||| |||||||||||||| | ||||| ||| ||||  |||||||||||||||||||| ||||    
T  34444917 aagaagctaaattagcccactcaaactagctccagggagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggc 34444818  T
Q  186 caacccaag 194  Q
    |||||||||    
T  34444817 caacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 3715566 - 3715451
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||| ||||||||||||||  |||| | ||||| ||||| ||||||||||| |||  ||| |||||||| || ||||||||||||||||| |    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcc 3715467  T
Q  186 caacccaagtgggtta 201  Q
    ||||| || |||||||    
T  3715466 caaccaaaatgggtta 3715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 6385976 - 6385882
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    ||||||||||||||||||||| |||||| |||  | ||||| ||||||||||||||  |||||| ||| | ||||||||||||||||||||||||    
T  6385976 aagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 31622997 - 31623067
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 3172733 - 3172820
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaata 176  Q
    |||||||||||||||||| |||||| |||||  || || |||| |||||||||||| |||| ||| ||||||||||||||||||||||    
T  3172733 aagctaaattagcccacccaaattaacactaaagaaaatcgaatctgagacctcgatgaggagcatactcccaggtcccaagtcaata 3172820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 14558075 - 14557962
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| ||||| |||||  |||  ||||||| |||||||||||||  ||||||| ||| ||| |||||||||||| ||| ||||| || |    
T  14558075 aagaagctaaattagaccacccaaattgacacc-gggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagac 14557977  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  14557976 caacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 20213155 - 20213057
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactagg 184  Q
    ||||||||||||||||||||| |||||  |||||| | ||| |||||||||||| | ||||||| ||| ||||||||||||||||   |||||||||||    
T  20213155 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 22107178 - 22107080
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactagg 184  Q
    ||||||||||||||||||||| |||||  |||||| | ||| |||||||||||| | ||||||| ||| ||||||||||||||||   |||||||||||    
T  22107178 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 6758384 - 6758497
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||| |||||||||||||  ||| || ||||| ||| | ||||||||||||| || ||| |||||||  ||| ||| ||||||||| ||||    
T  6758384 aagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggc 6758483  T
Q  186 caacccaagtgggt 199  Q
    |||| |||||||||    
T  6758484 caacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 30127472 - 30127399
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    ||||||||||||||||| |||| ||| ||||||||  |||||| ||||||||| || |||||||||||||||||    
T  30127472 cgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 10338178 - 10338246
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||||| ||||||| ||| ||||| |||||||||| ||||||||| | |||||||||||||    
T  10338178 cgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 1056647 - 1056762
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||||||||||||| ||||||||| ||  ||| || ||||| ||||| | | |||| ||||| | ||| ||||||| |||||| | |||||||||||||     
T  1056647 aagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccactaggt 1056746  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  1056747 caacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 11423638 - 11423565
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||||||||  ||| |||||||  ||||||||||||||||| || ||| |||||| ||||||    
T  11423638 cgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 13330159 - 13330087
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||| ||||||||| ||||||| ||  ||||||| || | ||||||||||||||||| |||||||||||||||    
T  13330159 cgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggtcaacccaagtgggtt 13330087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 12633123 - 12633008
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| |||| ||||||  || | | ||||| ||||| ||||| ||||| |||| ||| |||||||  ||||||||||||| |||  ||     
T  12633123 aagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccggga 12633024  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  12633023 caacccaagtgggtta 12633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 6776617 - 6776679
Alignment:
Q  134 tgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||| ||||||||| ||| || ||||| ||||||| ||||||||| |||||||||||||||    
T  6776617 tgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 18263954 - 18263892
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggag 148  Q
    |||||||||||||||||||||||||||  |||| ||||||| |||||||| |||||| |||||    
T  18263954 aagaagctaaattagcccacctaaattggcactggggagaatcgaacctgggacctcaaggag 18263892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 32613144 - 32613214
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtggg 198  Q
    ||||| ||||| || ||| ||| ||| ||||||||  |||||||||||||||| |||||||||||||||||    
T  32613144 cgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 24507548 - 24507605
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||| ||||||| ||| ||||| |||||||||| ||| ||||||||||||||||||    
T  24507548 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 24507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 3779406 - 3779339
Alignment:
Q  133 ctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| ||| ||| ||| ||||||| ||| |||| ||||||||||||| ||||| |||||||||    
T  3779406 ctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 13661590 - 13661520
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||||||| ||| ||||||| ||  |||| ||||| |||||| |||||||| ||||||||    
T  13661590 aacctgagacctcgaggaggagcacactcccaagtgtcaagccaata-cactagaccaacccatgtgggtta 13661520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 23910115 - 23910158
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagt 171  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||    
T  23910115 cgaacctgagaccttgaggaggagcacactcccaggtcccaagt 23910158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 28028569 - 28028530
Alignment:
Q  161 aggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  28028569 aggtcccaagtcaacaccaccaggccaacccaagtgggtt 28028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 346644 - 346551
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccac 180  Q
    |||||| |||||||||| || ||||||  |||  | ||||| ||||| |||||||||||||||  ||| ||||| ||||||||||||||||||||    
T  346644 aagaagataaattagcctacttaaattgacacgggtgagaatcgaacatgagacctcgaggagaagcacactcc-aggtcccaagtcaataccac 346551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 13227162 - 13227236
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttat 202  Q
    ||||| |||||| ||||||||| ||| |||||||| || ||   |||||||||  ||||||||||||||||||||    
T  13227162 cgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggttat 13227236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 14199909 - 14200023
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| ||||| |||||  ||||||   ||| |||| ||||||||| ||||||| ||| ||||||| ||| |||| | ||||| ||||      
T  14199909 aagaagctaaattagtccacccaaattgacactagaaggaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagag 14200008  T
Q  186 caacccaagtgggtt 200  Q
    |||||||| ||||||    
T  14200009 caacccaaatgggtt 14200023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 23242100 - 23241987
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||  |||  ||||||| || ||||| ||||| ||||||| | | ||||| |||||||||| ||| | ||| | ||    
T  23242100 aagaagctaaactagcccacccaaattggcaccggggagaaccggacctgtgaccttgaggaggagtacactccgaggtcccaaggcaacatcacca-gc 23242002  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  23242001 caacccaagtgggtt 23241987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 22702 - 22747
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||| ||| |||||||| ||||||||||||||||    
T  22702 actccaaggtcccaagccaaaaccactagcccaacccaagtgggtt 22747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 9433606 - 9433667
Alignment:
Q  140 ctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||| | ||| |||||||| |||||||||||||||||  || ||| ||||||||||||    
T  9433606 ctcgaggaagagcacactcccagatcccaagtcaataccacagggtcaatccaagtgggtta 9433667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 14278117 - 14278189
Alignment:
Q  130 aacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggttatt 203  Q
    ||||||||||||  |||||| ||  |||||||||||| ||| ||||| ||| ||||||||||| ||||||||||    
T  14278117 aacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaacccatgtgggttatt 14278189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 21943433 - 21943504
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||| |||||||||||| |  || |||| ||||||||||||||||| ||| | ||||| ||||||||||||    
T  21943433 gaaccttagacctcgaggaagaacacactctcaggtcccaagtcaatatcacgaagccaa-ccaagtgggtta 21943504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 34877117 - 34877149
Alignment:
Q  168 aagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||| |||||||||||||||||||||||||||    
T  34877117 aagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 41595 - 41710
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaac-gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    |||| |||||||||||||||| |||||  ||  || |||||  ||||||||||||||||||||| ||| |||| ||| || |||| ||||||||||||||    
T  41595 aagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggc 41694  T
Q  186 caacccaagtgggtta 201  Q
    ||||||||||||||||    
T  41695 caacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 94976 - 95044
Alignment:
Q  129 gaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgg 197  Q
    ||||||||||||| ||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 6884 - 6988
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaacgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggcc 186  Q
    ||||||||||||||||||||  |||||  ||| ||  ||| |||||||||||| | ||||||| ||| ||||||  |||||||| |||||||||||||||    
T  6884 aagaagctaaattagcccactcaaattgacaccag--agatcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggcc 6981  T
Q  187 aacccaa 193  Q
    |||||||    
T  6982 aacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 11600 - 11534
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaag 194  Q
    |||||||||||||||||||||| ||| |||||||| ||||||| ||||||||| |||||| ||||||    
T  11600 cgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 19966 - 20027
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaac 189  Q
    |||||||||||||| ||||||| ||| |||||||||| ||||| ||||||||||||||||||    
T  19966 cgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 24125 - 24053
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||| || |||| |||| ||| ||||| | ||||||||||||||||| ||||||||||||||||||||    
T  24125 cgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattaggccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 42524 - 42596
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    ||||||||||||   ||||||| ||| |||||||| | |||||||||||||||||||||||||||| ||||||    
T  42524 cgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 112396 - 112282
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||| |||||||||||  |||  | ||||| ||||||| ||||||| | ||||  || |||||||| | ||||| |||||| || ||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggc 112297  T
Q  186 caacccaagtgggtt 200  Q
    |||||||||||||||    
T  112296 caacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 805 - 910
Alignment:
Q  90 aagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaa 188  Q
    ||||||||||   ||||| ||||||  ||||| ||||| |||||||||||| ||||||||| ||| | |||||| ||||||| ||||||||| ||||||     
T  805 aagctaaatttatccacccaaattaatactagagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccac 904  T
Q  189 cccaag 194  Q
    ||||||    
T  905 cccaag 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 24844 - 24911
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagt 195  Q
    |||| ||||||||| ||||||| ||| ||||| ||| |||||||||| ||||| ||||||||||||||    
T  24844 cgaatctgagaccttgaggaggagcaaactccaaggccccaagtcaacaccaccaggccaacccaagt 24911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 19809 - 19924
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||| ||||||||| |||||| ||   |  |||| ||||| ||||||||| |||||| |||||||||||| ||||||| ||||||||  | ||    
T  19809 aagaagctaaactagcccacccaaattaacatcggaaagaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgc 19908  T
Q  186 caacccaagtgggtta 201  Q
    |||  |||||||||||    
T  19909 caattcaagtgggtta 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 15739 - 15853
Alignment:
Q  87 aagaagctaaattagcccacctaaattatcactagggagaa-cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggc 185  Q
    ||||||||||||||||||||| |||||  |||   |||||| | ||| |||||||| ||||||| ||| ||||| |  ||||||| ||||||||| ||||    
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggc 15838  T
Q  186 caacccaagtgggtt 200  Q
    ||||  |||||||||    
T  15839 caacttaagtgggtt 15853  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 1817 - 1760
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||| ||||||| ||| ||||| |||||||||| ||| ||||||||||||||||||    
T  1817 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 1760  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 12253 - 12196
Alignment:
Q  136 agacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaa 193  Q
    |||||| ||||||| ||| ||||| |||||||||| ||| ||||||||||||||||||    
T  12253 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 12196  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 13050 - 13118
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtg 196  Q
    |||||||||||||| ||||||| ||| |||||||| || |||| ||||||||| | ||||||| |||||    
T  13050 cgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 61679 - 61725
Alignment:
Q  155 actcccaggtcccaagtcaataccactaggccaacccaagtgggtta 201  Q
    |||||||||||||||| ||||||||||||  ||||||| ||||||||    
T  61679 actcccaggtcccaagccaataccactagatcaacccatgtgggtta 61725  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 2474 - 2546
Alignment:
Q  128 cgaacctgagacctcgaggaggcgcagactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 200  Q
    |||||||||||||| ||||||| ||| |||||||| ||| ||  |||||||||  | ||||||||| ||||||    
T  2474 cgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

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