View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11660_low_9 (Length: 464)

Name: NF11660_low_9
Description: NF11660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11660_low_9
NF11660_low_9
[»] chr5 (19 HSPs)
chr5 (19-454)||(37405111-37405546)
chr5 (19-70)||(8287823-8287874)
chr5 (18-73)||(9368616-9368671)
chr5 (22-83)||(18333463-18333524)
chr5 (19-71)||(24528562-24528614)
chr5 (19-70)||(15480344-15480395)
chr5 (19-70)||(25258105-25258156)
chr5 (19-70)||(25321895-25321946)
chr5 (19-70)||(27133004-27133055)
chr5 (19-70)||(41666768-41666819)
chr5 (19-70)||(41667004-41667055)
chr5 (19-69)||(170563-170613)
chr5 (310-376)||(37346834-37346900)
chr5 (19-76)||(7369746-7369803)
chr5 (21-70)||(15480583-15480632)
chr5 (19-71)||(8081123-8081175)
chr5 (22-70)||(24487656-24487704)
chr5 (18-70)||(28510112-28510164)
chr5 (18-70)||(29909732-29909784)
[»] chr1 (15 HSPs)
chr1 (19-82)||(52650770-52650833)
chr1 (19-83)||(31181511-31181575)
chr1 (21-68)||(856005-856052)
chr1 (19-70)||(4113017-4113068)
chr1 (19-70)||(17452690-17452741)
chr1 (19-70)||(25137314-25137365)
chr1 (19-70)||(26865369-26865420)
chr1 (19-70)||(40079174-40079225)
chr1 (19-70)||(51589014-51589065)
chr1 (28-82)||(11234247-11234301)
chr1 (19-69)||(26176930-26176980)
chr1 (22-71)||(2859637-2859686)
chr1 (19-68)||(38733404-38733453)
chr1 (19-71)||(25145730-25145782)
chr1 (19-71)||(52961604-52961656)
[»] chr2 (11 HSPs)
chr2 (18-70)||(2029790-2029842)
chr2 (18-70)||(2030025-2030077)
chr2 (22-71)||(5509104-5509153)
chr2 (19-70)||(2324262-2324313)
chr2 (19-70)||(16419524-16419575)
chr2 (19-70)||(40379220-40379271)
chr2 (19-70)||(40379455-40379506)
chr2 (21-70)||(19191621-19191670)
chr2 (19-68)||(32884129-32884178)
chr2 (28-76)||(5450495-5450543)
chr2 (19-83)||(15124546-15124610)
[»] chr8 (17 HSPs)
chr8 (19-70)||(18939308-18939359)
chr8 (19-70)||(4828315-4828366)
chr8 (19-70)||(5590379-5590430)
chr8 (19-70)||(8929039-8929090)
chr8 (19-70)||(19256597-19256648)
chr8 (19-70)||(19256831-19256882)
chr8 (19-70)||(24075317-24075368)
chr8 (19-70)||(27204986-27205037)
chr8 (19-70)||(27205084-27205135)
chr8 (19-70)||(27205182-27205233)
chr8 (19-82)||(38475769-38475832)
chr8 (19-70)||(39960214-39960265)
chr8 (19-70)||(42846616-42846667)
chr8 (21-70)||(4828092-4828141)
chr8 (19-68)||(39052942-39052991)
chr8 (19-83)||(5931947-5932011)
chr8 (19-71)||(24532431-24532483)
[»] chr6 (15 HSPs)
chr6 (19-70)||(12329955-12330006)
chr6 (19-70)||(4868588-4868639)
chr6 (19-70)||(4868824-4868875)
chr6 (19-70)||(8026411-8026462)
chr6 (19-70)||(8026626-8026677)
chr6 (19-70)||(11721927-11721978)
chr6 (19-70)||(12330190-12330241)
chr6 (19-70)||(12330302-12330353)
chr6 (19-70)||(30256834-30256885)
chr6 (19-70)||(33494561-33494612)
chr6 (28-82)||(5648671-5648725)
chr6 (19-73)||(27772968-27773022)
chr6 (19-68)||(25065107-25065156)
chr6 (19-83)||(6065997-6066061)
chr6 (22-70)||(27656483-27656531)
[»] chr4 (12 HSPs)
chr4 (19-70)||(39902574-39902625)
chr4 (18-70)||(28073192-28073244)
chr4 (19-70)||(17111585-17111636)
chr4 (19-70)||(21498817-21498868)
chr4 (19-70)||(22231319-22231370)
chr4 (19-70)||(40717452-40717503)
chr4 (21-70)||(9685422-9685471)
chr4 (19-68)||(12005482-12005531)
chr4 (19-68)||(28245539-28245588)
chr4 (22-70)||(22845458-22845506)
chr4 (22-70)||(25052877-25052925)
chr4 (19-71)||(52559589-52559641)
[»] chr3 (17 HSPs)
chr3 (19-70)||(4155346-4155397)
chr3 (19-71)||(20327859-20327911)
chr3 (18-70)||(24866218-24866270)
chr3 (19-71)||(45828268-45828320)
chr3 (19-70)||(1723087-1723138)
chr3 (19-70)||(11589807-11589858)
chr3 (19-70)||(17638256-17638307)
chr3 (19-70)||(20327625-20327676)
chr3 (19-70)||(22729122-22729173)
chr3 (19-70)||(27670403-27670454)
chr3 (19-70)||(35038439-35038490)
chr3 (19-70)||(45828041-45828092)
chr3 (20-70)||(8018991-8019041)
chr3 (22-70)||(6487344-6487392)
chr3 (22-70)||(35038205-35038253)
chr3 (18-70)||(47702420-47702472)
chr3 (22-70)||(54567917-54567965)
[»] chr7 (13 HSPs)
chr7 (19-71)||(6634877-6634929)
chr7 (19-70)||(21054964-21055015)
chr7 (19-70)||(25620158-25620209)
chr7 (19-70)||(34027415-34027466)
chr7 (28-71)||(36993084-36993127)
chr7 (19-70)||(48243072-48243123)
chr7 (20-73)||(26028969-26029022)
chr7 (22-71)||(40746523-40746572)
chr7 (19-71)||(3038094-3038146)
chr7 (19-71)||(14540962-14541014)
chr7 (19-83)||(15317574-15317638)
chr7 (22-66)||(23839092-23839136)
chr7 (22-82)||(40991743-40991803)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-71)||(288667-288718)


Alignment Details
Target: chr5 (Bit Score: 383; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 19 - 454
Target Start/End: Original strand, 37405111 - 37405546
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaaaagagaactgctaattcttgattaaagcaaacaac 118  Q
    ||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37405111 ggcaatccccacctcaaaagccggttttgtggggttgtattagacccaaccataaattttaagaaaagagaactgctaattcttgattaaagcaaacaac 37405210  T
Q  119 cagtcacatcataagagaggaaatacctggaaaacaacgaaggttttccgggcttaatacattgttattataactataagttcatttacacacttaaaca 218  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37405211 cagtcacatcataagagaggaaatacctgaaaaacaacgaaggttttccgggcttaatacattgttattataactataagttcatttacacacttaaaca 37405310  T
Q  219 gcacgtaaataaaattatttgattaacnnnnnnntaatgaataattaatgaataaatcagtggaccaatcaatgcaaaacttgaactctcatttttggaa 318  Q
    |||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37405311 gcacgtaaataaaattatttgattaacaaaaaaataatgaataattaatgattaaatcagtggaccaatcaatgcaaaactggaactctcatttttggaa 37405410  T
Q  319 gaataatgggtaagaaacctggaggaaacattaactttaacattgatattgtcatttttggagtgagttgaaagtgaccatgtgaatatgtgatgcattg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37405411 gaataatgggtaagaaacctggaggaaacattaactttaacattgatattgtcatttttggagtgagttgaaagtgaccatgtgaatatgtgatgcattg 37405510  T
Q  419 aacatataaacttacaatataaatcctaacattctt 454  Q
    |||||||||| |||||||||||||||||||||||||    
T  37405511 aacatataaatttacaatataaatcctaacattctt 37405546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 8287823 - 8287874
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||||||||||| |||| ||||||||| |||||| |||||||||||||    
T  8287823 ggcaatccccacctcacaagccggttttgtggggttgtgttaggcccaacca 8287874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9368616 - 9368671
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataa 73  Q
    ||||||||| ||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  9368616 aggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataa 9368671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18333524 - 18333463
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    ||||| ||||||| |||| ||||||||| |||||| ||||||||||||| ||||| ||||||    
T  18333524 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaagaa 18333463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24528562 - 24528614
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||||||| |||| ||||||||| |||||| ||||||||||||||    
T  24528562 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccat 24528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 15480344 - 15480395
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||||||||||||| |||| | |||||||||||||    
T  15480344 ggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaacca 15480395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 25258156 - 25258105
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  25258156 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 25258105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 25321946 - 25321895
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  25321946 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 25321895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 27133055 - 27133004
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  27133055 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 27133004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 41666819 - 41666768
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  41666819 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 41666768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 41667055 - 41667004
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  41667055 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 41667004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 170613 - 170563
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacc 69  Q
    |||| ||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  170613 ggcagtcctcacctcacaagccggttttgtgaggttgtgttaggcccaacc 170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 37346834 - 37346900
Alignment:
Q  310 tttttggaagaataatgggtaagaaacctggaggaaacattaactttaacattgatattgtcatttt 376  Q
    |||||||||||||  |||||| ||||| | ||||||||||||| |||||||| |||| || ||||||    
T  37346834 tttttggaagaattttgggtacgaaacatagaggaaacattaaatttaacatggatactgccatttt 37346900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7369746 - 7369803
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaatt 76  Q
    |||| ||| ||||||| |||| ||||||||| |||||| ||||||||||||| |||||    
T  7369746 ggcagtcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaatt 7369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 15480583 - 15480632
Alignment:
Q  21 caatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  15480583 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 15480632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 8081175 - 8081123
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| || |||| |||| ||||||||| |||||| ||||||||||||||    
T  8081175 ggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccat 8081123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 24487704 - 24487656
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| |||||||||||||||| ||| |||||||||    
T  24487704 aatcctcacctcacaagccggttttgtgaggttgtgttaagcccaacca 24487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 28510112 - 28510164
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| || |||| |||| ||||||||| |||||| |||||||||||||    
T  28510112 aggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaacca 28510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 29909784 - 29909732
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| ||||||| |||| |||||||||  ||||| |||||||||||||    
T  29909784 aggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacca 29909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 52650833 - 52650770
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaaga 82  Q
    |||||||| ||||||| |||||||||||||| |||||| |||||||||||||||| || |||||    
T  52650833 ggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaaga 52650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 31181575 - 31181511
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    |||||||| ||||||| ||||||||||| || |||||| ||||||||||||| ||||| ||||||    
T  31181575 ggcaatcctcacctcacaagctggttttatggggttgtgttaggcccaaccacaaattctaagaa 31181511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 856005 - 856052
Alignment:
Q  21 caatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||| ||||||| |||||||||||||||| |||| |||||||||||    
T  856005 caatcctcacctcacaagctggttttgtgagattgtgttaggcccaac 856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 4113068 - 4113017
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  4113068 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4113017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 17452741 - 17452690
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  17452741 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 17452690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 25137365 - 25137314
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  25137365 ggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 25137314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 26865420 - 26865369
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||||||||||| |||| ||||||||| |||||| |||||| ||||||    
T  26865420 ggcaatccccacctcacaagccggttttgtggggttgtattaggctcaacca 26865369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 40079174 - 40079225
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  40079174 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 40079225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 51589014 - 51589065
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  51589014 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 51589065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 11234247 - 11234301
Alignment:
Q  28 cacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaaga 82  Q
    ||||||| |||| ||||||||| |||||| ||||||||||||| ||||| |||||    
T  11234247 cacctcataagccggttttgtggggttgtattaggcccaaccacaaattataaga 11234301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26176930 - 26176980
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacc 69  Q
    |||||||| |||||||||| | ||||||||| |||||| ||||||||||||    
T  26176930 ggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaacc 26176980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 2859686 - 2859637
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||| ||||||| |||| |||||||||||||||| |||| |||||||||    
T  2859686 aatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccat 2859637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 38733404 - 38733453
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| | || |||||||||||||||| |||||||||||    
T  38733404 ggcaatcctcacctcataggccggttttgtgaggttgtgttaggcccaac 38733453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25145782 - 25145730
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||||||| |||| || |||||| |||||| ||||||||||||||    
T  25145782 ggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaaccat 25145730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 52961604 - 52961656
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| |||||||||||| |||||| || |||||| ||||| ||||||||    
T  52961604 ggcaatcctcacctcaaaagccggttttatggggttgtgttaggtccaaccat 52961656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 2029790 - 2029842
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||    
T  2029790 aggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaacca 2029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 2030025 - 2030077
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||    
T  2030025 aggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaacca 2030077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5509104 - 5509153
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  5509104 aatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccat 5509153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 2324262 - 2324313
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  2324262 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 2324313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 16419524 - 16419575
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  16419524 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 16419575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 40379271 - 40379220
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  40379271 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 40379220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 40379506 - 40379455
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  40379506 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 40379455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 19191670 - 19191621
Alignment:
Q  21 caatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  19191670 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 19191621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 32884129 - 32884178
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||    
T  32884129 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 32884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 5450543 - 5450495
Alignment:
Q  28 cacctcaaaagctggttttgtgaggttgttttaggcccaaccataaatt 76  Q
    ||||||| |||| ||||||||| |||||| ||||||||||||| |||||    
T  5450543 cacctcacaagccggttttgtggggttgtcttaggcccaaccacaaatt 5450495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 15124610 - 15124546
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    |||||||||||||||| |||| | ||||||| |||||| |||| ||||||||  | |||||||||    
T  15124610 ggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaagaa 15124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 18939359 - 18939308
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||||| |||||||||||||| |||||||||||||    
T  18939359 ggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaacca 18939308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 4828315 - 4828366
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  4828315 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4828366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 5590430 - 5590379
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||| ||| |||| |||||||||||||||| |||||||||||||    
T  5590430 ggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaacca 5590379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 8929039 - 8929090
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  8929039 ggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaacca 8929090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 19256648 - 19256597
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  19256648 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 19256597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 19256882 - 19256831
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  19256882 ggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaacca 19256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 24075368 - 24075317
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  24075368 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 24075317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 27204986 - 27205037
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  27204986 ggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 27205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 27205084 - 27205135
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  27205084 ggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 27205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 27205182 - 27205233
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  27205182 ggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 27205233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 38475769 - 38475832
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaaga 82  Q
    |||||||| ||||||| |||| ||||||||  |||||| ||||||||||||| ||||| |||||    
T  38475769 ggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaaga 38475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 39960214 - 39960265
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  39960214 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 39960265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 42846667 - 42846616
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  42846667 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 42846616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 4828092 - 4828141
Alignment:
Q  21 caatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  4828092 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4828141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39052991 - 39052942
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||    
T  39052991 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 39052942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 5932011 - 5931947
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    |||||||| ||||||| |||| ||||||||| |||| | |||||||||||||  | |||||||||    
T  5932011 ggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaagaa 5931947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24532483 - 24532431
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||  ||||||| |||| ||||||||| |||||| ||||||||||||||    
T  24532483 ggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccat 24532431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 12330006 - 12329955
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||||| |||||||||||||| |||||||||||||    
T  12330006 ggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaacca 12329955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 4868639 - 4868588
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  4868639 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 4868875 - 4868824
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  4868875 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4868824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 8026411 - 8026462
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  8026411 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 8026462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 8026626 - 8026677
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  8026626 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 8026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 11721927 - 11721978
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  11721927 ggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 11721978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 12330241 - 12330190
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| || ||||||| |||| |||||||||||||||| |||||||||||||    
T  12330241 ggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaacca 12330190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 12330353 - 12330302
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| || |||| |||| |||||||||||||||| |||||||||||||    
T  12330353 ggcaatcctcatctcacaagccggttttgtgaggttgtgttaggcccaacca 12330302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 30256834 - 30256885
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  30256834 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 30256885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 33494561 - 33494612
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  33494561 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 33494612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 5648725 - 5648671
Alignment:
Q  28 cacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaaga 82  Q
    ||||||| |||| |||||||||||||||| ||||| |||||||||| || |||||    
T  5648725 cacctcacaagccggttttgtgaggttgtgttaggtccaaccataatttctaaga 5648671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 27772968 - 27773022
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataa 73  Q
    |||||||| ||||||| |||||||||||||| | |||| ||| ||||||||||||    
T  27772968 ggcaatcctcacctcacaagctggttttgtgggattgtgttaagcccaaccataa 27773022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 25065156 - 25065107
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||    
T  25065156 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 25065107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6065997 - 6066061
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    |||||||| ||||| | ||| |||||||||| |||||| ||||||||||||| || | |||||||    
T  6065997 ggcaatcctcacctgacaagttggttttgtggggttgtgttaggcccaaccacaattcttaagaa 6066061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 27656483 - 27656531
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  27656483 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 27656531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 39902625 - 39902574
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||||||||||||| |||||| |||||||||||||    
T  39902625 ggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaacca 39902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 28073244 - 28073192
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||| || ||||||| |||||||||||||| |||||| |||||||||||||    
T  28073244 aggcaaccctcacctcacaagctggttttgtggggttgtgttaggcccaacca 28073192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 17111585 - 17111636
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||| |||| ||||||||||| |||||| |||||||||||||    
T  17111585 ggcaatcctcaccttaaaaactggttttgtggggttgtgttaggcccaacca 17111636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 21498817 - 21498868
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  21498817 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 21498868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 22231370 - 22231319
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  22231370 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 22231319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 40717503 - 40717452
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| |||||||||||  ||||||||| |||||| |||||||||||||    
T  40717503 ggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaacca 40717452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 9685422 - 9685471
Alignment:
Q  21 caatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||| ||||||| |||  |||||||||||||||| |||||||||||||    
T  9685422 caatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaacca 9685471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 12005531 - 12005482
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| |||| |||||||||||||||| |||| ||||||    
T  12005531 ggcaatcctcacctcacaagccggttttgtgaggttgtgttagacccaac 12005482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28245588 - 28245539
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaac 68  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||    
T  28245588 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 28245539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 22845506 - 22845458
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  22845506 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 22845458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 25052877 - 25052925
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  25052877 aatccgcacctcacaagccggttttgtggggttgtgttaggcccaacca 25052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 52559589 - 52559641
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||  ||||||| |||| ||||||||| |||||| ||||||||||||||    
T  52559589 ggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccat 52559641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 4155346 - 4155397
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| |||||||||||| ||||||||| |||||| |||||||||||||    
T  4155346 ggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaacca 4155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 20327911 - 20327859
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||||||| |||| ||||||||| |||||| ||||||||||||||    
T  20327911 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccat 20327859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 24866218 - 24866270
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  24866218 aggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 24866270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45828268 - 45828320
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||||| |||||||| |||| ||||||||| |||||| ||||||||||||||    
T  45828268 ggcaatctccacctcacaagcaggttttgtggggttgtgttaggcccaaccat 45828320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 1723138 - 1723087
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  1723138 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 1723087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 11589807 - 11589858
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  11589807 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 11589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 17638256 - 17638307
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||||||||||| | |||||| |||||||||||||    
T  17638256 ggcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaacca 17638307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 20327676 - 20327625
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  20327676 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 20327625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 22729122 - 22729173
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||| ||| |||| |||||||||||||||| |||||||||||||    
T  22729122 ggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaacca 22729173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 27670454 - 27670403
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||||| || ||||||||| |||||| |||||||||||||    
T  27670454 ggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaacca 27670403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 35038490 - 35038439
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||| | |||||||||||||| |||||| |||||||||||||    
T  35038490 ggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaacca 35038439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 45828041 - 45828092
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| |||||||||||||||| |||||||| ||||    
T  45828041 ggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctacca 45828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 8018991 - 8019041
Alignment:
Q  20 gcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  8018991 gcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 8019041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 6487392 - 6487344
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| |||||| || ||||||||||||||||||||    
T  6487392 aatcctcacctcacaagccggttttatggggttgttttaggcccaacca 6487344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 35038253 - 35038205
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  35038253 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 35038205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 47702472 - 47702420
Alignment:
Q  18 aggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||||||| || || | |||||||||||||| |||||| |||||||||||||    
T  47702472 aggcaatcctcatcttacaagctggttttgtggggttgtgttaggcccaacca 47702420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 54567917 - 54567965
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    ||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  54567917 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 54567965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6634877 - 6634929
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||||||| ||||| |||||||| |||||| ||||||||||||||    
T  6634877 ggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccat 6634929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 21055015 - 21054964
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  21055015 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 21054964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 25620158 - 25620209
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  25620158 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 25620209  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 34027415 - 34027466
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  34027415 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 34027466  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 36993127 - 36993084
Alignment:
Q  28 cacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||    
T  36993127 cacctcacaagctggttttgtggggttgtgttaggcccaaccat 36993084  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 48243123 - 48243072
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaacca 70  Q
    |||||||| ||||||| |||| ||||||||| |||||| |||||||||||||    
T  48243123 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 48243072  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 26029022 - 26028969
Alignment:
Q  20 gcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataa 73  Q
    ||||||| ||||||| |||| | |||||||||||||| |||| |||||||||||    
T  26029022 gcaatcctcacctcacaagccgattttgtgaggttgtgttagacccaaccataa 26028969  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 40746523 - 40746572
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||| ||||||| ||||  ||||||||||||||| ||||||||||||||    
T  40746523 aatccacacctcacaagccagttttgtgaggttgtgttaggcccaaccat 40746572  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3038146 - 3038094
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||| ||| |||| ||||||||| |||||| ||||||||||||||    
T  3038146 ggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccat 3038094  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14541014 - 14540962
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    |||||||| ||||||| |||  ||||||||| |||||| ||||||||||||||    
T  14541014 ggcaatccacacctcataagtcggttttgtggggttgtgttaggcccaaccat 14540962  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 15317574 - 15317638
Alignment:
Q  19 ggcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaagaa 83  Q
    |||||||| ||||||| || || ||||||||  ||||| |||||||||||||||| || ||||||    
T  15317574 ggcaatcctcacctcacaaactagttttgtggtgttgtgttaggcccaaccataatttctaagaa 15317638  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23839136 - 23839092
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggccca 66  Q
    ||||| ||||||| |||| |||||||||||||||| |||||||||    
T  23839136 aatcctcacctcacaagccggttttgtgaggttgtgttaggccca 23839092  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40991803 - 40991743
Alignment:
Q  22 aatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccataaattttaaga 82  Q
    ||||| || |||| || |||||||||||||||||| |||| | |||||| |||||||||||    
T  40991803 aatcctcatctcacaatctggttttgtgaggttgtgttagactcaaccacaaattttaaga 40991743  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 288718 - 288667
Alignment:
Q  20 gcaatccccacctcaaaagctggttttgtgaggttgttttaggcccaaccat 71  Q
    ||||||| ||||||| ||||||||||||||  ||||| ||||||||||||||    
T  288718 gcaatcctcacctcacaagctggttttgtggagttgtgttaggcccaaccat 288667  T

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