View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11665_high_10 (Length: 257)
Name: NF11665_high_10
Description: NF11665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11665_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 812601 - 812367
Alignment:
| Q |
6 |
tgtgatgtagagttccaaactactttacattgtaattaactttaatcgataatttgagattagactgttaagattacacatcagttttagtgaagctgta |
105 |
Q |
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| T |
812601 |
tgtgatgtagagttccaaactactttacattgtaattaattttaatcgataatttgagattagactgttaagattacacatcaattttagtgaagctgta |
812502 |
T |
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| Q |
106 |
tgatctcagccgttaaaccaaatcggacagttgagagtagtaaatgtgccacacaagttaatgcaccaactccaaattcattgcggattctcttagtttg |
205 |
Q |
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| T |
812501 |
tgatctcagccgttaaaccaaatcggacagttgagagaagtaaatgtgccacacaagttaatgcaccaactccaaattcattgtggattctcttagtttg |
812402 |
T |
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| Q |
206 |
tgatataaactaatatttcatttcattttatattcat |
242 |
Q |
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||| ||||| | |||||||||||||||||||||||| |
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| T |
812401 |
tgaaataaa--actatttcatttcattttatattcat |
812367 |
T |
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