View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11665_high_9 (Length: 261)
Name: NF11665_high_9
Description: NF11665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11665_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 4 - 255
Target Start/End: Complemental strand, 9242364 - 9242113
Alignment:
| Q |
4 |
aaatatactctctaaaatgagattaggtccaatttatttttccataaaatgagaataggaattttcatggttaacaaaatgcaacaaattttagctgaaa |
103 |
Q |
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| T |
9242364 |
aaatatactctctaaaatgagattagatccaatttatttttccataaaatgagaataggaattttcatggttaacaaaatgcaacaaattttagctgaaa |
9242265 |
T |
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| Q |
104 |
atgtaatgtgtaactaacaacaaatgtccttttcatgcaataaactattgattgaactatacatcatgtctagtttgaatgtgaattaaataaaaagata |
203 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9242264 |
atgtaatgtgtaactaacaacaaatgtcattttcatgcaataaactattgattgaactatacatcatgtctagtttgaatgtgaattaaataaaaagata |
9242165 |
T |
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| Q |
204 |
ggcatgtaacatgacaatattggtatatgtagtgatgttcatcaaaaattga |
255 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
9242164 |
ggcatgtaacatgacaatattggtagatgtagtgatgttcatcaaaaattga |
9242113 |
T |
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