View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11668_high_13 (Length: 588)
Name: NF11668_high_13
Description: NF11668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11668_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 522; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 18 - 574
Target Start/End: Original strand, 35480361 - 35480918
Alignment:
| Q |
18 |
agccttcgtggataaatctttcgctttatatagcaatcctcttttgacacaaagctgcaccaaaactttgacaaactcaaactaaattagattagaaatc |
117 |
Q |
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| T |
35480361 |
agccttcatggataaatctttcgctttatatagcaatcctcttttgacacaaagctgcaccaaaactttgacaaactcaaactaaattagattagaaatc |
35480460 |
T |
|
| Q |
118 |
taagctacattatagtttaaatattatgatttatttatatattaaagtttagatgagttgtaccacgagagttctttgacgtcaagaaaaatctcaaaat |
217 |
Q |
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| T |
35480461 |
taagctacattatattttagatattatgatttatttatatattaaagtttagatgagttgtagcacgagagttctttgacgtcaagaaaagtctcaaaat |
35480560 |
T |
|
| Q |
218 |
ttatata-ttattgatcaacaaaagcctcacacgatagtgagtttgaactcacatccttcttaaacatgagttgagtaaatatgaattggacaaacataa |
316 |
Q |
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| T |
35480561 |
ttatataattattgatcaacaaaagcctcacacgatagcgagtttgaactcacatccttcttaaacatgagttgattaaatatgaattggacaaacataa |
35480660 |
T |
|
| Q |
317 |
catgcgttatgacatattagcattcacagaaaattatttgcgaaatgcaattagaaatatatcatgattcttttcaacttttcttttactatgagactaa |
416 |
Q |
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| T |
35480661 |
catgcgttatgacatattagcattcacagaaaattatttgcgaaatgcaattagaaatatatcatgattcttttcaacttttcttttactatgagactaa |
35480760 |
T |
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| Q |
417 |
gttaaatctcaaacaatagtttataaatcgaattgaacaatttaattgttgaatcttgaaccacccaaggacagattcaggtggggcactcatgggtctc |
516 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35480761 |
gttaaatctcaaacaatagtttataaatcgaattgaacaatttaattgttgaatcttgaaccacccaaggacagattcaggtggggcactcatgggtctc |
35480860 |
T |
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| Q |
517 |
ccctccagctggtcgaattttctttcccgtttcttccattatgcatcttatgggttct |
574 |
Q |
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| T |
35480861 |
ccctccagctggtcgaattttctttcccgtttcttccattatgcatcttatgggttct |
35480918 |
T |
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