View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11668_low_16 (Length: 529)

Name: NF11668_low_16
Description: NF11668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11668_low_16
NF11668_low_16
[»] chr4 (44 HSPs)
chr4 (264-459)||(34041913-34042108)
chr4 (264-458)||(34293171-34293365)
chr4 (311-461)||(7017029-7017178)
chr4 (99-228)||(34293398-34293526)
chr4 (99-228)||(7017248-7017376)
chr4 (343-461)||(8434489-8434611)
chr4 (267-354)||(24830987-24831074)
chr4 (264-341)||(1688057-1688134)
chr4 (119-228)||(34041771-34041878)
chr4 (99-232)||(53732285-53732417)
chr4 (99-170)||(8434408-8434479)
chr4 (273-338)||(15478122-15478186)
chr4 (112-173)||(23777410-23777471)
chr4 (155-232)||(23996260-23996336)
chr4 (99-148)||(34293122-34293171)
chr4 (99-148)||(36225490-36225539)
chr4 (111-228)||(46798844-46798960)
chr4 (101-145)||(34042071-34042115)
chr4 (385-448)||(51573389-51573452)
chr4 (170-232)||(1687964-1688026)
chr4 (99-145)||(7017022-7017068)
chr4 (300-459)||(13385711-13385867)
chr4 (99-148)||(17482272-17482321)
chr4 (99-144)||(36224028-36224073)
chr4 (99-151)||(23776730-23776782)
chr4 (101-144)||(8434573-8434616)
chr4 (103-170)||(9477525-9477592)
chr4 (99-146)||(15477512-15477559)
chr4 (99-146)||(51964945-51964992)
chr4 (99-145)||(51574038-51574084)
chr4 (99-165)||(52307847-52307913)
chr4 (99-148)||(4894671-4894720)
chr4 (99-148)||(7834663-7834712)
chr4 (308-356)||(42885030-42885078)
chr4 (408-459)||(9477536-9477587)
chr4 (103-146)||(15478305-15478348)
chr4 (408-459)||(23630795-23630846)
chr4 (299-350)||(41131589-41131640)
chr4 (99-145)||(23630786-23630832)
chr4 (302-356)||(47786308-47786362)
chr4 (103-148)||(15450598-15450643)
chr4 (99-148)||(24021535-24021583)
chr4 (408-461)||(36225479-36225532)
chr4 (106-134)||(34041373-34041401)
[»] scaffold1532 (3 HSPs)
scaffold1532 (264-461)||(1461-1658)
scaffold1532 (108-228)||(1306-1425)
scaffold1532 (99-145)||(1619-1665)
[»] chr3 (58 HSPs)
chr3 (264-428)||(6515268-6515432)
chr3 (264-461)||(44682161-44682358)
chr3 (264-458)||(45713753-45713947)
chr3 (264-452)||(8814361-8814549)
chr3 (264-458)||(42370888-42371082)
chr3 (292-428)||(39499472-39499608)
chr3 (99-228)||(6475342-6475470)
chr3 (99-228)||(6746470-6746598)
chr3 (264-402)||(27077989-27078127)
chr3 (264-402)||(27083786-27083924)
chr3 (271-382)||(6746608-6746719)
chr3 (99-228)||(6515468-6515596)
chr3 (99-228)||(44682394-44682521)
chr3 (102-228)||(45713983-45714108)
chr3 (271-382)||(6475220-6475332)
chr3 (99-228)||(8814585-8814712)
chr3 (101-228)||(27077827-27077953)
chr3 (101-228)||(27083624-27083750)
chr3 (294-428)||(34948201-34948335)
chr3 (99-232)||(27065472-27065599)
chr3 (120-228)||(22896691-22896798)
chr3 (265-458)||(93372-93568)
chr3 (265-459)||(30991609-30991806)
chr3 (385-459)||(27065251-27065325)
chr3 (280-356)||(49080774-49080849)
chr3 (343-428)||(18195562-18195646)
chr3 (300-356)||(27731504-27731560)
chr3 (99-146)||(14986055-14986102)
chr3 (99-173)||(31152893-31152967)
chr3 (99-148)||(45713704-45713753)
chr3 (99-172)||(48117019-48117092)
chr3 (302-382)||(30860397-30860477)
chr3 (101-225)||(31153660-31153783)
chr3 (188-228)||(42370823-42370863)
chr3 (105-149)||(48120236-48120280)
chr3 (155-232)||(30991837-30991913)
chr3 (273-356)||(25891383-25891463)
chr3 (108-228)||(25891574-25891693)
chr3 (100-148)||(27731009-27731057)
chr3 (101-140)||(33580196-33580235)
chr3 (99-145)||(30991600-30991646)
chr3 (385-458)||(25147640-25147713)
chr3 (99-148)||(42371082-42371130)
chr3 (321-356)||(9012107-9012142)
chr3 (127-225)||(46970664-46970759)
chr3 (115-145)||(8814361-8814391)
chr3 (411-461)||(14986045-14986095)
chr3 (114-160)||(22895012-22895058)
chr3 (264-356)||(27065352-27065441)
chr3 (411-461)||(45713711-45713761)
chr3 (99-148)||(25147591-25147640)
chr3 (408-461)||(31153725-31153778)
chr3 (99-148)||(33580761-33580810)
chr3 (101-142)||(38467867-38467908)
chr3 (108-141)||(44682163-44682196)
chr3 (109-145)||(93372-93408)
chr3 (409-461)||(6746477-6746529)
chr3 (168-208)||(39905355-39905395)
[»] chr8 (54 HSPs)
chr8 (264-458)||(8624895-8625089)
chr8 (264-428)||(13474797-13474961)
chr8 (283-430)||(4203126-4203273)
chr8 (264-458)||(9479003-9479197)
chr8 (267-412)||(42443333-42443477)
chr8 (273-428)||(14124344-14124499)
chr8 (264-382)||(1565858-1565976)
chr8 (99-228)||(1566012-1566140)
chr8 (99-228)||(13474633-13474761)
chr8 (264-383)||(44374520-44374639)
chr8 (100-228)||(38776499-38776625)
chr8 (99-221)||(19238301-19238422)
chr8 (99-221)||(19311485-19311606)
chr8 (99-228)||(4203318-4203446)
chr8 (264-376)||(38776349-38776461)
chr8 (101-228)||(9479233-9479351)
chr8 (268-458)||(42906815-42907007)
chr8 (268-458)||(3469113-3469305)
chr8 (352-420)||(25107672-25107740)
chr8 (273-354)||(34347497-34347578)
chr8 (99-148)||(9478954-9479003)
chr8 (308-456)||(30805936-30806082)
chr8 (158-228)||(44374415-44374484)
chr8 (99-148)||(1565796-1565845)
chr8 (155-232)||(3469003-3469079)
chr8 (99-148)||(40304619-40304668)
chr8 (189-228)||(8625125-8625164)
chr8 (279-333)||(15438390-15438445)
chr8 (279-333)||(15529694-15529749)
chr8 (102-145)||(25113110-25113153)
chr8 (100-141)||(961397-961438)
chr8 (379-428)||(15438185-15438234)
chr8 (379-428)||(15529489-15529538)
chr8 (300-349)||(24478304-24478353)
chr8 (155-232)||(42907041-42907117)
chr8 (99-142)||(8624846-8624889)
chr8 (101-148)||(25106946-25106993)
chr8 (410-461)||(25113098-25113149)
chr8 (101-172)||(42443019-42443089)
chr8 (135-201)||(1554281-1554346)
chr8 (301-351)||(6149095-6149145)
chr8 (99-232)||(34347608-34347738)
chr8 (330-386)||(24478203-24478258)
chr8 (176-211)||(42443286-42443321)
chr8 (411-461)||(9478961-9479011)
chr8 (108-146)||(14124532-14124570)
chr8 (103-145)||(42443526-42443568)
chr8 (108-145)||(961354-961391)
chr8 (99-148)||(3469305-3469353)
chr8 (103-148)||(4203050-4203095)
chr8 (412-461)||(25106951-25107000)
chr8 (409-461)||(1566081-1566133)
chr8 (109-145)||(3469269-3469305)
chr8 (109-145)||(42906815-42906851)
[»] chr6 (16 HSPs)
chr6 (264-458)||(18053509-18053703)
chr6 (300-445)||(6851829-6851974)
chr6 (264-352)||(13865857-13865945)
chr6 (264-356)||(33483460-33483552)
chr6 (158-228)||(18053404-18053473)
chr6 (99-166)||(18052888-18052955)
chr6 (103-148)||(18053703-18053748)
chr6 (300-356)||(31730502-31730557)
chr6 (104-173)||(20468684-20468753)
chr6 (385-458)||(31730402-31730475)
chr6 (385-459)||(20468451-20468525)
chr6 (99-133)||(33483351-33483385)
chr6 (409-461)||(18052895-18052947)
chr6 (300-356)||(20240079-20240135)
chr6 (300-356)||(22134063-22134119)
chr6 (300-356)||(22141416-22141472)
[»] chr1 (59 HSPs)
chr1 (264-459)||(37553111-37553306)
chr1 (265-458)||(508592-508778)
chr1 (23-228)||(508355-508555)
chr1 (264-461)||(13413950-13414147)
chr1 (264-459)||(49901309-49901503)
chr1 (99-228)||(37553342-37553470)
chr1 (264-402)||(30694366-30694504)
chr1 (99-225)||(49901542-49901667)
chr1 (103-228)||(13413790-13413914)
chr1 (264-358)||(36018037-36018131)
chr1 (302-424)||(34503680-34503803)
chr1 (265-458)||(35760352-35760548)
chr1 (269-349)||(3979733-3979813)
chr1 (282-356)||(46835130-46835204)
chr1 (265-458)||(27055676-27055872)
chr1 (133-228)||(30694540-30694634)
chr1 (264-459)||(32708893-32709082)
chr1 (99-152)||(14188695-14188748)
chr1 (99-148)||(32151781-32151830)
chr1 (99-232)||(36018163-36018295)
chr1 (99-148)||(52853900-52853949)
chr1 (277-340)||(10920642-10920705)
chr1 (273-352)||(24656356-24656435)
chr1 (277-354)||(29119212-29119293)
chr1 (265-354)||(46435314-46435407)
chr1 (99-173)||(24657092-24657166)
chr1 (474-515)||(508839-508880)
chr1 (155-232)||(27055909-27055985)
chr1 (155-232)||(46435206-46435282)
chr1 (99-146)||(12458529-12458576)
chr1 (302-356)||(26214006-26214060)
chr1 (155-232)||(29119092-29119168)
chr1 (179-232)||(35760267-35760320)
chr1 (108-148)||(34503837-34503877)
chr1 (422-461)||(508781-508820)
chr1 (315-350)||(27413755-27413790)
chr1 (385-459)||(12458454-12458528)
chr1 (281-358)||(24656509-24656589)
chr1 (308-350)||(26089563-26089605)
chr1 (99-145)||(29119529-29119575)
chr1 (108-145)||(37553111-37553148)
chr1 (385-428)||(24656301-24656344)
chr1 (170-229)||(52594866-52594925)
chr1 (385-459)||(3979644-3979718)
chr1 (411-461)||(32151773-32151823)
chr1 (404-458)||(46435640-46435694)
chr1 (155-232)||(46832709-46832786)
chr1 (102-148)||(46835304-46835350)
chr1 (99-145)||(52853365-52853410)
chr1 (108-145)||(508781-508818)
chr1 (385-458)||(10920548-10920621)
chr1 (375-428)||(26089631-26089684)
chr1 (99-148)||(27055628-27055676)
chr1 (104-145)||(32709045-32709086)
chr1 (99-148)||(46435694-46435742)
chr1 (411-459)||(12458519-12458567)
chr1 (109-145)||(27055676-27055712)
chr1 (109-145)||(35760512-35760548)
chr1 (109-145)||(46435658-46435694)
[»] scaffold0006 (2 HSPs)
scaffold0006 (264-461)||(280486-280683)
scaffold0006 (99-232)||(280322-280454)
[»] chr2 (41 HSPs)
chr2 (264-459)||(3670708-3670903)
chr2 (264-458)||(31659330-31659524)
chr2 (266-402)||(13829174-13829310)
chr2 (101-228)||(13829678-13829805)
chr2 (101-228)||(31659559-31659685)
chr2 (264-458)||(10862899-10863091)
chr2 (99-232)||(10862737-10862869)
chr2 (264-382)||(6831501-6831620)
chr2 (99-228)||(6831354-6831478)
chr2 (99-220)||(3670545-3670665)
chr2 (300-428)||(30712144-30712272)
chr2 (324-419)||(23386840-23386935)
chr2 (326-458)||(44021217-44021349)
chr2 (264-341)||(14798831-14798908)
chr2 (99-174)||(3677459-3677534)
chr2 (276-356)||(9792176-9792257)
chr2 (99-148)||(6831634-6831683)
chr2 (99-146)||(3670904-3670951)
chr2 (273-356)||(13293866-13293949)
chr2 (99-170)||(29404155-29404225)
chr2 (99-173)||(3678077-3678151)
chr2 (99-232)||(36911427-36911553)
chr2 (99-144)||(10863095-10863140)
chr2 (179-232)||(14798941-14798994)
chr2 (295-356)||(36911340-36911401)
chr2 (99-146)||(30712065-30712112)
chr2 (99-148)||(32275834-32275883)
chr2 (99-172)||(39443360-39443433)
chr2 (304-352)||(16242297-16242345)
chr2 (105-145)||(42182725-42182765)
chr2 (99-145)||(9792389-9792435)
chr2 (409-459)||(10862746-10862796)
chr2 (114-211)||(29513263-29513362)
chr2 (99-148)||(31659283-31659330)
chr2 (99-145)||(36469894-36469940)
chr2 (186-228)||(39443444-39443486)
chr2 (408-461)||(29404162-29404214)
chr2 (377-458)||(44021853-44021934)
chr2 (409-461)||(3678092-3678144)
chr2 (109-145)||(10863055-10863091)
chr2 (326-358)||(44021941-44021973)
[»] chr7 (37 HSPs)
chr7 (264-419)||(9963952-9964106)
chr7 (267-428)||(24790966-24791125)
chr7 (264-382)||(1507529-1507647)
chr7 (264-382)||(23102644-23102762)
chr7 (117-228)||(1507383-1507493)
chr7 (108-228)||(9963802-9963917)
chr7 (99-228)||(24790799-24790927)
chr7 (99-232)||(2658299-2658430)
chr7 (264-356)||(9158701-9158793)
chr7 (264-356)||(1398217-1398310)
chr7 (114-228)||(10982346-10982459)
chr7 (103-232)||(33473734-33473862)
chr7 (111-228)||(47412942-47413058)
chr7 (264-356)||(2658463-2658554)
chr7 (179-228)||(23102798-23102847)
chr7 (100-228)||(7579432-7579559)
chr7 (264-352)||(33473614-33473702)
chr7 (100-232)||(43439322-43439453)
chr7 (101-232)||(9158539-9158669)
chr7 (101-148)||(23657866-23657913)
chr7 (99-148)||(1507661-1507710)
chr7 (103-148)||(11486658-11486703)
chr7 (99-145)||(38796729-38796775)
chr7 (101-146)||(23657263-23657308)
chr7 (99-148)||(46916507-46916556)
chr7 (111-152)||(47413519-47413560)
chr7 (102-148)||(9964145-9964191)
chr7 (315-352)||(7571028-7571065)
chr7 (315-352)||(7577443-7577480)
chr7 (315-352)||(7579805-7579842)
chr7 (99-145)||(9158857-9158902)
chr7 (385-459)||(23657309-23657383)
chr7 (100-144)||(7561614-7561658)
chr7 (111-151)||(10982659-10982699)
chr7 (104-132)||(18095058-18095086)
chr7 (409-461)||(23657856-23657908)
chr7 (387-459)||(33473424-33473496)
[»] chr5 (32 HSPs)
chr5 (301-461)||(15145402-15145562)
chr5 (264-388)||(28867874-28867996)
chr5 (120-226)||(28867731-28867836)
chr5 (99-226)||(36896849-36896973)
chr5 (264-356)||(36896719-36896811)
chr5 (155-228)||(9514599-9514671)
chr5 (264-337)||(9514707-9514780)
chr5 (276-352)||(18933446-18933522)
chr5 (277-459)||(26637527-26637707)
chr5 (101-228)||(32715459-32715584)
chr5 (385-458)||(14148903-14148976)
chr5 (155-232)||(14149128-14149204)
chr5 (273-338)||(39057981-39058046)
chr5 (265-458)||(18014332-18014528)
chr5 (101-232)||(39057812-39057934)
chr5 (155-232)||(18014224-18014300)
chr5 (99-152)||(32716103-32716156)
chr5 (103-148)||(33106042-33106087)
chr5 (385-453)||(39058094-39058162)
chr5 (315-350)||(4927553-4927588)
chr5 (170-224)||(26637440-26637494)
chr5 (99-148)||(10142155-10142204)
chr5 (268-325)||(14149038-14149094)
chr5 (99-131)||(9737880-9737912)
chr5 (99-151)||(39058164-39058215)
chr5 (101-152)||(5999252-5999303)
chr5 (389-455)||(9738160-9738226)
chr5 (380-458)||(12383537-12383615)
chr5 (302-354)||(6114631-6114683)
chr5 (378-458)||(10142204-10142284)
chr5 (109-145)||(14148903-14148939)
chr5 (109-145)||(18014492-18014528)
[»] scaffold0002 (2 HSPs)
scaffold0002 (265-356)||(452814-452905)
scaffold0002 (99-232)||(452649-452781)
[»] scaffold0538 (3 HSPs)
scaffold0538 (300-356)||(3981-4036)
scaffold0538 (300-428)||(8446-8571)
scaffold0538 (101-146)||(3610-3655)
[»] scaffold0778 (4 HSPs)
scaffold0778 (103-208)||(3562-3666)
scaffold0778 (108-148)||(3197-3237)
scaffold0778 (385-428)||(3267-3310)
scaffold0778 (273-356)||(3337-3420)
[»] scaffold0096 (3 HSPs)
scaffold0096 (101-152)||(41615-41666)
scaffold0096 (99-153)||(40722-40776)
scaffold0096 (405-461)||(41605-41661)
[»] scaffold0193 (1 HSPs)
scaffold0193 (170-232)||(23067-23129)
[»] scaffold0041 (1 HSPs)
scaffold0041 (99-172)||(7301-7374)


Alignment Details
Target: chr4 (Bit Score: 144; Significance: 2e-75; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 264 - 459
Target Start/End: Original strand, 34041913 - 34042108
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||     
T  34041913 gacaatgacatgcttaaggtacgaaacatgtaataaagacaaacttttaaggaaacaatatttagaatgatgaaaatgagtgtaaattagtgaaggttgt 34042012  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| || |||||||||||||||||||||||    
T  34042013 taacttgcaccttaataatacttataaaaatgagtgtaaataatcaagtggatgtaggttgctaacttgcaccttagtgtttttaggtgggtgtaa 34042108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 264 - 458
Target Start/End: Complemental strand, 34293365 - 34293171
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||| |||||||||||| ||||    
T  34293365 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaagaaaacaatattttgaatgatgaaagtgggtgaaaattagtgaaggttgc 34293266  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||  |||||| |||||||| ||| || ||| |  ||||| |||||||||    
T  34293265 taacatgcaccttaataatacttataaaaatgagtgtaaataatcaagcaggtgtaggttgctaacttgcaccttaataattttacgtgggtgta 34293171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 311 - 461
Target Start/End: Complemental strand, 7017178 - 7017029
Alignment:
Q  311 taaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaa 410  Q
    ||||||||||||||||| ||| ||||||||| |||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  7017178 taaggaaacaatatttggaatcatgaaagtgggtgtaaat-agtgaaggttgttaacttgcaccataataatacttataaaaatgagtgtaaataatcaa 7017080  T
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||| ||||| |||||||| ||| || |||||||||||||||||||||||||    
T  7017079 gtgagtgtaggttgctaacttgcaccttagtgtttttaggtgggtgtaagt 7017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 34293526 - 34293398
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||| ||| |||||||||| ||||| |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||| ||||||    
T  34293526 gctgctaacttacactcacttaaaaacactgaggtgtaagttagcaagctgcacccacttataatttactaaaa-cacccttttgtttatattataatta 34293428  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||| |||||||||||||    
T  34293427 attttaaatagaagggtaattttgtaacta 34293398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 7017376 - 7017248
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||||||| |||||||||||||||||||||| |  |||| | ||  |||||||||| ||||||| ||| |||||||||||||||||||||    
T  7017376 gctgctaacttacacccaactaaaaacactaaggtgcaagtaattaagccgaacctacttataattgactaaaa-cacccttttgtttatattctaatta 7017278  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||| ||||||||||||||||||||||    
T  7017277 attttaagtagaagggcaattttgtaacta 7017248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 8434489 - 8434611
Alignment:
Q  343 gtgtaaattagtgaagattgctaactt----gcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtacttt 438  Q
    |||||||||||||||| ||||||||||     |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| ||| || ||    
T  8434489 gtgtaaattagtgaaggttgctaacttacacccaccttaataatacttataaaaatgagtgtaaataatcaagtgggtgtaggatgctaacttgcacctt 8434588  T
Q  439 agtgtttttaggtgggtgtaagt 461  Q
    |||||||||||||| ||||||||    
T  8434589 agtgtttttaggtgagtgtaagt 8434611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 24830987 - 24831074
Alignment:
Q  267 aatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagt 354  Q
    ||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  24830987 aatgacatgcttaagatacaagacatgtaatagagacaaacttttaaggaaacaatatttggaacgatgaaagtgtgtgtaaattagt 24831074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 1688057 - 1688134
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtg 341  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  1688057 gacaatgacatgcttaatgtacaaaacatgtaataaagacaaatttttaaagaaacaatatttggaatgatgaaagtg 1688134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 34041771 - 34041878
Alignment:
Q  119 taaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaat 218  Q
    |||||||| |||||||||||||||||||||||||  || | ||||||||| |||||||| |||||||||||||||||| ||||||||||  |||| ||||    
T  34041771 taaaaacattaaggtgcaagttagcaagctgcacccacgtgtaatttact-aaaacact-ttttgtttatattctaatcaattttaaatgaaaggacaat 34041868  T
Q  219 tttgtaacta 228  Q
    ||||||||||    
T  34041869 tttgtaacta 34041878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 53732417 - 53732285
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||| ||||||||| ||| |||||||||| |||||| || |||| |||||  ||  ||||||| |||||||||| ||  ||||||||| |||||||||||    
T  53732417 gctgttaatttacatccatctaaaaacacgaaggtgtaaattagaaagctatacccacttatattttactaaaa-catccttttgtttctattctaatta 53732319  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | |||||||||||||| | |||||||||||||||    
T  53732318 aatttaaatagaagggtagttttgtaactatctt 53732285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 8434408 - 8434479
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaa 170  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  8434408 gctgctaacttacacccacctgaaaacactaaggtgcaagttagcaaactgcacccacttataatttactaa 8434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 15478122 - 15478186
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaa 338  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||    
T  15478122 atgcttaaggtacaaaacatgtaacagagacaaacttttaaggaaataatatttg-aatgatgaaa 15478186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 23777471 - 23777410
Alignment:
Q  112 acccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |  |||||||||||    
T  23777471 acccacctaaaaacactaaggtgcaagttagcaagctgcacccacttgtcttttactaaaaa 23777410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 23996260 - 23996336
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  23996260 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 23996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 34293122 - 34293171
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  34293122 gctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagct 34293171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 36225539 - 36225490
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  36225539 gctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagct 36225490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 46798960 - 46798844
Alignment:
Q  111 cacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaataga 210  Q
    |||||| | ||||||| ||| |||||||||| ||||| ||||  |||  |  |||||||||| |||||||||| ||||||| |||||||| |||||||||    
T  46798960 cacccatccaaaaacaataaagtgcaagttaacaagcggcacatactagttctttactaaaa-cactcttttgattatattttaattaatattaaataga 46798862  T
Q  211 agggcaattttgtaacta 228  Q
    | |||| |||||||||||    
T  46798861 atggcacttttgtaacta 46798844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 34042115 - 34042071
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  34042115 tgctaaattacacccacctaaaaacactaaggtgcaagttagcaa 34042071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 448
Target Start/End: Complemental strand, 51573452 - 51573389
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgttttta 448  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||| || ||||| ||||||    
T  51573452 ttataaaaatgagtgtaaataatcaagtgggtgtaggttgctaacttgcaccttagtattttta 51573389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 1687964 - 1688026
Alignment:
Q  170 aaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| ||||||||| |||||||||||| ||||||||||| | || |||||||||||||||    
T  1687964 aaaacacccttttgtttctattctaattaaatttaaatagaatgacatttttgtaactatctt 1688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 7017022 - 7017068
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  7017022 gctgttaacttacacccacctaaaaacactaaggtgcaagttagcaa 7017068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 459
Target Start/End: Complemental strand, 13385867 - 13385711
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga--agattgctaacttgcaccttaataatacttataaaaatgag 397  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||   || ||  ||    ||  || |||| ||||||||| |||||    
T  13385867 agacacacttttaaggagacaatatttgaaatgat-aaagtgaatgtaaattagtgaggtgagtgtaaa----caatttgataaaacttataaacatgag 13385773  T
Q  398 tgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||| |||||||||||||| | ||||| || ||| || ||||| ||||  |||||||||||    
T  13385772 tgtaaataatcaagtgggtgcaagttgcaaacttgcacattagtattttggggtgggtgtaa 13385711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 17482321 - 17482272
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  17482321 gctgctaacttacacctacctaaaaacactaaggtgcacgttagcaagct 17482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 36224028 - 36224073
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagca 144  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  36224028 gctgctaacttacacctacctaaaaacactaaggtgcaagttagca 36224073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 23776730 - 23776782
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgca 151  Q
    |||| ||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  23776730 gctgttaacttacacccacctaaaaacactaaggtacaagttggcaagctgca 23776782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 8434616 - 8434573
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagca 144  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  8434616 tgctaacttacactcacctaaaaacactaaggtgcaagttagca 8434573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 9477592 - 9477525
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaa 170  Q
    |||||||||||||||||||||||||||||||  || |||||||||| |||  |||| || ||||||||    
T  9477592 ctaatttacacccacctaaaaacactaaggtttaaattagcaagctacacccacttgtattttactaa 9477525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 15477512 - 15477559
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||    
T  15477512 gctgctaatttacatccacctaaaaacactaaggtgtaaattagcaag 15477559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 51964992 - 51964945
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  51964992 gctgctaacttacacccatctaaaaacactaagatgcaagttagcaag 51964945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 51574084 - 51574038
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  51574084 gctgctaacttacaaccacctaaaaacattaaggtgcaagttagcaa 51574038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 52307913 - 52307847
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataattt 165  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||| ||||| |||  |||||||||||    
T  52307913 gctgttaacttacacccacctaaaaacattaaggtgcaggttagtaagctacacccacttataattt 52307847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 4894671 - 4894720
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  4894671 gctgctattttacatccacctaaaaacactaaggtgtaaggtagcaagct 4894720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 7834712 - 7834663
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||||||||||||||| |||||| |  ||||||||||    
T  7834712 gctgctaatttacacccacctaaaaacacgaaggtgtacattagcaagct 7834663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 42885078 - 42885030
Alignment:
Q  308 ttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||||| |||| ||| ||||||||| ||||||||||||||    
T  42885078 ttttaaggaaacaatttttggaataatgaaagtgggtgtaaattagtga 42885030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Original strand, 9477536 - 9477587
Alignment:
Q  408 caagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||  ||||||||||  || |||||||||||||||||||||||    
T  9477536 caagtgggtgtagcttgctaatttaaaccttagtgtttttaggtgggtgtaa 9477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 15478348 - 15478305
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||||||||||||||||||||||||| | || ||||||||    
T  15478348 ctaatttacacccacctaaaaacactaaggagtaaattagcaag 15478305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Complemental strand, 23630846 - 23630795
Alignment:
Q  408 caagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||||||||||||||   | ||| |||||||||||||||||||    
T  23630846 caagtgggtgtatgttgctaatttactccttaatgtttttaggtgggtgtaa 23630795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 41131589 - 41131640
Alignment:
Q  299 aagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaat 350  Q
    ||||||| |||||||| ||||||||||||||||||| ||||| | |||||||    
T  41131589 aagacaagcttttaagaaaacaatatttgaaatgattaaagtaaatgtaaat 41131640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 23630786 - 23630832
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||||||||||||||| ||||| | || |||||||    
T  23630786 gctgctaatttacacccacctaaaaacattaaggagtaaattagcaa 23630832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 356
Target Start/End: Original strand, 47786308 - 47786362
Alignment:
Q  302 acaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||||||| |||||||||||||||||||| ||  ||  |||||||||||||    
T  47786308 acaaacttttaaagaaacaatatttgaaatgataaagatggatgtaaattagtga 47786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 15450643 - 15450598
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||||||| ||||||||| ||||||||| || ||||||||||    
T  15450643 ctaatttacaccaacctaaaaatactaaggtgtaaattagcaagct 15450598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 24021535 - 24021583
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||    
T  24021535 gctgctaatttacacccacct-aaatcactaaggtgtaaattagcaagct 24021583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 36225479 - 36225532
Alignment:
Q  408 caagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||||||  ||||||| ||| || |||||||||||| ||||||||||||    
T  36225479 caagtgggtgtagcttgctaacttgcaccttagtgtttttaagtgggtgtaagt 36225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 34041373 - 34041401
Alignment:
Q  106 atttacacccacctaaaaacactaaggtg 134  Q
    |||||||||||||||||||||||||||||    
T  34041373 atttacacccacctaaaaacactaaggtg 34041401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532 (Bit Score: 142; Significance: 3e-74; HSPs: 3)
Name: scaffold1532
Description:

Target: scaffold1532; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 264 - 461
Target Start/End: Original strand, 1461 - 1658
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| | |||    
T  1461 gacaatgacattcttaaggtacaaaacatataataaagacaaactcttaaggaaacaatatttggaatgatgaaagtgagtataaattagtgaaaactgc 1560  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||||    
T  1561 taacttgcaccttaataatagttataaaaatgagtgtaaataatcaagtgggtgtatgttgctaacttgcaccttagtgtttttaggtaggtgtaagt 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 1306 - 1425
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaat 207  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  1306 ttacatccacctaaaaacactaaggtgcaggttagcaagctgcacctacttataatttact-aaaacactcttttatttatattctaattaattttaaat 1404  T
Q  208 agaagggcaattttgtaacta 228  Q
    | |||||||||||| ||||||    
T  1405 aaaagggcaattttataacta 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 1665 - 1619
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1665 gctgctaacttacacctacctaaaaacactaaggtgcaagttagcaa 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 1e-73; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 264 - 428
Target Start/End: Complemental strand, 6515432 - 6515268
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  6515432 gacaatgacatgcttaagatacaaaacatgtaataaagacaaacttttaaggaaataatatttgaaatgatgaaagtgagtgtaaattagtgaaggttgc 6515333  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  6515332 taacttgcaccttaataatacttataaaaatgagtgtaaataatcaagtgggtgtaggttgctaa 6515268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 264 - 461
Target Start/End: Complemental strand, 44682358 - 44682161
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||    
T  44682358 gacaatgacatgattaaggtactaaacatgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaaatgggtgtaaattagtgaaggttgc 44682259  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| ||| ||| || |||||||| ||||||||||||||||    
T  44682258 taacttgcaccttaataatacttgtaaaaatgagtgtaaataatcaagtgggtgtaggttgttaacttgcaccttagtgttcttaggtgggtgtaagt 44682161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 264 - 458
Target Start/End: Complemental strand, 45713947 - 45713753
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  45713947 gacaatgacatgtttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaagtgaatgtaaattagtgaagattgc 45713848  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||| ||| || ||| |  |||||||||||||||    
T  45713847 taacttacaccttaataatacttataaaaataagtgtaaataatcaagtgagtgtaggttgctaacttgcaccttaataattttaggtgggtgta 45713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 264 - 452
Target Start/End: Complemental strand, 8814549 - 8814361
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||    
T  8814549 gacaatgacatacttaaagtacaaaacatgtaataaagataaacttttaaggaagcaatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 8814450  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtg 452  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||| ||| || ||||||||||||||||    
T  8814449 taacttgcaccttaataatacttataaaaatgagtgtaaataatctagtggatgtaggttgctaacttgcaccttagtgtttttaggtg 8814361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 264 - 458
Target Start/End: Original strand, 42370888 - 42371082
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  42370888 gacaataacatgcttaatgtacaaaacatgtaataaagacaaacttttaacgaaataatatttggaatgatgaaagtgagtgtaaattagtgaaggttgc 42370987  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| || ||| |  || ||||||||||||    
T  42370988 taacttgcatcttaataatacttataaaaatgagtgtaaataatcaagtggatgtaggttgctaacttgcaccttaatagttataggtgggtgta 42371082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 292 - 428
Target Start/End: Complemental strand, 39499608 - 39499472
Alignment:
Q  292 tgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaa 391  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39499608 tgtaataaagacaaacttttaagaaaacaatatttgaaatgatgaaagtgggtgtaaattagtgaaggttgctaacttgcaccttaataatacttataaa 39499509  T
Q  392 aatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  39499508 aatgagtgtaaataatcaagtgggtgtaggttgctaa 39499472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 6475470 - 6475342
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  6475470 gctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataatttactaaaa-cactcttttgtttatattctaatta 6475372  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||    
T  6475371 attttaaatagaagggcaattttgtaacta 6475342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 6746470 - 6746598
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||    
T  6746470 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccacttataatttact-aaaacactcttttgtttatattctagtta 6746568  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||    
T  6746569 attttaaatagaagggcaattttgtaacta 6746598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 264 - 402
Target Start/End: Original strand, 27077989 - 27078127
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |   ||||||||||||||  ||||    
T  27077989 gacaatgacatgcttaaggtacaaaacatataataaagacaaacttttaatgaaacaatatttggaatgatgaaaattgatgtaaattagtgaatgttgc 27078088  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaa 402  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27078089 taacttgcaccttaataatacttataaaaatgagtgtaa 27078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 264 - 402
Target Start/End: Original strand, 27083786 - 27083924
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |   ||||||||||||||  ||||    
T  27083786 gacaatgacatgcttaaggtacaaaacatataataaagacaaacttttaatgaaacaatatttggaatgatgaaaattgatgtaaattagtgaatgttgc 27083885  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaa 402  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27083886 taacttgcaccttaataatacttataaaaatgagtgtaa 27083924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 6746608 - 6746719
Alignment:
Q  271 atatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttg 370  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  6746608 atatgcgtaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttaaaatgatgaaagtgggtgtaaattagtgaagattgttaacttg 6746707  T
Q  371 caccttaataat 382  Q
    ||||||||||||    
T  6746708 caccttaataat 6746719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 6515596 - 6515468
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||||| |||||||||||    
T  6515596 gctgttaacttacacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataatttact-aaaacacccttttgtttgtattctaatta 6515498  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||||||||||| |||||    
T  6515497 attttaaatagaagggcaattttgcaacta 6515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 44682521 - 44682394
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||    
T  44682521 gctgctaacttacacccacctaaaaacacta-ggtgcaagttagcaagctgcacccacttataatttactaaaa-cacacttttgtttatattctaatta 44682424  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||  ||||||||||||||    
T  44682423 attttaaatagaagaacaattttgtaacta 44682394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 45714108 - 45713983
Alignment:
Q  102 gctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaatt 201  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  45714108 gctaacttatacccacctaaaaacactaaggtgcaagttagcaagctgcattcacttataatttact-aaaacacccttttgtttatattctaattaatt 45714010  T
Q  202 ttaaatagaagggcaattttgtaacta 228  Q
    || ||||||||| ||||||||||||||    
T  45714009 tttaatagaaggacaattttgtaacta 45713983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 271 - 382
Target Start/End: Complemental strand, 6475332 - 6475220
Alignment:
Q  271 atatgcttaaggtacaaaa-catgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaactt 369  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||||    
T  6475332 atatgcttaaggtacaaaaacatgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaactgggtgtaaattagtgaaggttgttaactt 6475233  T
Q  370 gcaccttaataat 382  Q
    |||||||||||||    
T  6475232 gcaccttaataat 6475220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 8814712 - 8814585
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||| |||| |||  ||||||||||||||||||||    
T  8814712 gctgctaacttacacccacctaaaa-cactaaggtgtaagttagcaagctgcacccacttataatttaccaaaa-caccattttgtttatattctaatta 8814615  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||| | ||||||||||||||    
T  8814614 attttaaatagaatgacaattttgtaacta 8814585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 27077827 - 27077953
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| ||||||||||| |||||||||||  | ||||||| ||||||||||  ||||||  ||||||| || ||| |||||||||||||||||||||||    
T  27077827 tgctaacttacacccaccaaaaaacactaaaatacaagttatcaagctgcacctacttattgtttactacaa-cacccttttgtttatattctaattaat 27077925  T
Q  201 tttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||| ||||||||||||||||    
T  27077926 tttaaatagaaaggcaattttgtaacta 27077953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 27083624 - 27083750
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| ||||||||||| |||||||||||  | ||||||| ||||||||||  ||||||  ||||||| || ||| |||||||||||||||||||||||    
T  27083624 tgctaacttacacccaccaaaaaacactaaaatacaagttatcaagctgcacctacttattgtttactacaa-cacccttttgtttatattctaattaat 27083722  T
Q  201 tttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||| ||||||||||||||||    
T  27083723 tttaaatagaaaggcaattttgtaacta 27083750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 428
Target Start/End: Complemental strand, 34948335 - 34948201
Alignment:
Q  294 taataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaa 393  Q
    ||||| ||||||||||||||||||| |||||||  ||||||| ||||| |||||||||| ||||  ||||||||||   |||||||||||||||||||||    
T  34948335 taatagagacaaacttttaaggaaataatatttagaatgatggaagtgggtgtaaattaatgaatgttgctaacttttcccttaataatacttataaaaa 34948236  T
Q  394 tgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
     || ||||| ||||||||||| ||||  |||||||    
T  34948235 agaatgtaaataatcaagtggatgtagattgctaa 34948201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 27065599 - 27065472
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||||||| ||||||||||||||| ||||||| || |||||||||| |||  ||||||| ||||||||       ||||||||| |||||||||||    
T  27065599 gctgctaatttatacccacctaaaaacagtaaggtgtaaattagcaagctacacccacttatattttactaa------ccttttgtttctattctaatta 27065506  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | |||||||| |||| ||||||||||||||||||    
T  27065505 aatttaaataaaaggacaattttgtaactatctt 27065472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 22896798 - 22896691
Alignment:
Q  120 aaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaatt 219  Q
    ||||||||||||||||||||||||||| | ||   ||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||||| | ||    
T  22896798 aaaaacactaaggtgcaagttagcaagttacatccacttatattttattaaaat-acccttttgtttatattctaattaattttaaatagaagggtagtt 22896700  T
Q  220 ttgtaacta 228  Q
    |||||||||    
T  22896699 ttgtaacta 22896691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 458
Target Start/End: Complemental strand, 93568 - 93372
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg---agtgtaaattagtgaaga 359  Q
    ||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||   ||||||||||||| ||||    
T  93568 acaatgacatacttaaggtataaaacatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatcagtgtaaattagt-aaga 93470  T
Q  360 t--tgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgt 457  Q
    |  |  ||| |   |  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| |||||||||||||||    
T  93469 tggttgtaaat---aatttgataaaatttataaaaatgagtgtagataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgt 93373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 265 - 459
Target Start/End: Complemental strand, 30991806 - 30991609
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg---agtgtaaattagt--gaa 357  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||  |||  ||||||||||   |||||||||||||  ||     
T  30991806 acaatgacatgcttaaggtataaaacatgtaatagagacaaacttttaaggaaataatatttagaatgggatgaaagtgatcagtgtaaattagtaagat 30991707  T
Q  358 gattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgt 457  Q
    | |||  ||    ||  || |||| | |||||||||||||||||  ||||||||||| ||||||||||||| ||  || ||||| ||||||||||| |||    
T  30991706 ggttgtaaa----caatttgataaaatttataaaaatgagtgtatataatcaagtggatgtatgttgctaacttacaccttagtatttttaggtggatgt 30991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 27065325 - 27065251
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||||||||||  |||||||||||||||||||||| || || ||| |||||||||||||||||||||||    
T  27065325 ttataaaaatgagtgtatataatcaagtgggtgtatgttgcaaacttatacattagtgtttttaggtgggtgtaa 27065251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 49080774 - 49080849
Alignment:
Q  280 aggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||| |||||  |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  49080774 aggtacaaaacatataatatggacaaatttttaaagaaacaatatttgaaatgatgaaagtga-tgtaaattagtga 49080849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 18195646 - 18195562
Alignment:
Q  343 gtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    |||||||||||| ||| ||||||||||||||||||  |||| || ||||||||||||||| |||| ||||||||||| ||||||||    
T  18195646 gtgtaaattagttaagtttgctaacttgcaccttataaatattt-taaaaatgagtgtaaataattaagtgggtgtaggttgctaa 18195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 27731504 - 27731560
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27731504 agacacacttttaagaaaacaatatttgaaatgatgaaagtgtgtgtaaattagtga 27731560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 14986102 - 14986055
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  14986102 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaag 14986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 31152893 - 31152967
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaa 173  Q
    |||||||| || || ||||||||||||||||||||||||||||||||| |||||  |||| || |||||||||||    
T  31152893 gctgctaacttgcatccacctaaaaacactaaggtgcaagttagcaagttgcacccacttgtattttactaaaaa 31152967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 45713704 - 45713753
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  45713704 gctgctgacttacacccacctaaaaacactaaggtgcaagttagcaagct 45713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 48117019 - 48117092
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaa 172  Q
    |||| ||| ||||||||||||||||| | ||||||| ||||||||||| |||||  ||||||||||||||||||    
T  48117019 gctgataacttacacccacctaaaaatattaaggtgtaagttagcaagttgcacccacttataatttactaaaa 48117092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 30860477 - 30860397
Alignment:
Q  302 acaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataat 382  Q
    |||||||||||| ||||||||||||  |||||||||| ||  | ||||||||||||| ||| ||||||||| |||||||||    
T  30860477 acaaacttttaatgaaacaatatttagaatgatgaaaatggatataaattagtgaaggttgttaacttgcatcttaataat 30860397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 31153783 - 31153660
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||  |||| || ||||||  |||||| |||| || | ||||   ||| ||    
T  31153783 tgctaacttgcacccacctaaaaacactaaggtgcaagttagcaagctacacccacttgtattttact-gaaacaccctttagtctctattaatatttat 31153685  T
Q  201 tttaaatagaagggcaattttgtaa 225  Q
    ||||||| |||||  ||||||||||    
T  31153684 tttaaatggaaggataattttgtaa 31153660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 42370823 - 42370863
Alignment:
Q  188 tattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42370823 tattctaattaattttaaatagaagggcaattttgtaacta 42370863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 48120280 - 48120236
Alignment:
Q  105 aatttacacccacctaaaaacactaaggtgcaagttagcaagctg 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  48120280 aatttacacccacctaaaaacactaaggtgcatgttagcaagctg 48120236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 30991913 - 30991837
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| |||||||| |||||||||||  ||||||||||    
T  30991913 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatataagggcaatttcttaactatctt 30991837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 25891463 - 25891383
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||||||| |||||||  ||||| |||||||||||||| ||| ||| |||| || |||||||||| ||||||||||||||    
T  25891463 atgcttaaggta-aaaacat--aataaggacaaacttttaagaaaaaaatctttggaaggatgaaagtgggtgtaaattagtga 25891383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 25891693 - 25891574
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaat 207  Q
    |||||||||||||||| || |||||||||||||| ||| || |||  | ||||| || ||||||| | |  |||| ||||||||||||||||||||||||    
T  25891693 ttacacccacctaaaatcattaaggtgcaagttaacaatctacacccatttatatttgactaaaa-ctccattttatttatattctaattaattttaaat 25891595  T
Q  208 agaagggcaattttgtaacta 228  Q
     ||| | || |||||| ||||    
T  25891594 tgaatgacacttttgttacta 25891574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 27731009 - 27731057
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||    
T  27731009 ctgcaaatttacacccacctaaaaaaattaaggtgcaagttagcaagct 27731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 33580196 - 33580235
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagtt 140  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  33580196 tgctaacttacacccacctaaaaacactaaggtgcaagtt 33580235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 30991600 - 30991646
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  30991600 gctgctaatttacatccacctaaaaatactaaggtgtaagttagcaa 30991646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 25147713 - 25147640
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||| ||||||||| | |||| |||||||| ||| || ||| |  |||||||||||||||    
T  25147713 ttataaaaatgagtgtaaataatcaagtagatgtaggttgctaacttgcaccttaataattttaggtgggtgta 25147640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 42371130 - 42371082
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  42371130 gctgctaacttacacc-acctaaaaatactaaggtgcaagttagcaagct 42371082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 356
Target Start/End: Original strand, 9012107 - 9012142
Alignment:
Q  321 atatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||| ||||||||||||||||||||||||||||    
T  9012107 atatttggaatgatgaaagtgagtgtaaattagtga 9012142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 46970664 - 46970759
Alignment:
Q  127 ctaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaa 225  Q
    |||||||||||||||||||||| |||  |||| || |||||| ||||||| ||||||  | ||||| ||||||||||||||  ||||||| ||| ||||    
T  46970664 ctaaggtgcaagttagcaagctacacccacttgtattttact-aaaacacccttttg--tctattcaaattaattttaaattaaagggcagtttagtaa 46970759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 145
Target Start/End: Original strand, 8814361 - 8814391
Alignment:
Q  115 cacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||||||||||||||||||    
T  8814361 cacctaaaaacactaaggtgcaagttagcaa 8814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 461
Target Start/End: Original strand, 14986045 - 14986095
Alignment:
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  14986045 gtgggtgtaacttgctaacttgcaccttagtgtttttaggtgggtgtaagt 14986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 22895012 - 22895058
Alignment:
Q  114 ccacctaaaaacactaaggtgcaagttagcaagctgcacggacttat 160  Q
    ||||||||||||| ||| ||||||||||||||||| ||| |||||||    
T  22895012 ccacctaaaaacattaaagtgcaagttagcaagctacaccgacttat 22895058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 27065441 - 27065352
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatattt-gaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||| ||||||||||  |||||||||||||||| || ||| ||| |||||||||||||||| |||||||||  |||| ||||||| ||||||    
T  27065441 gacaataatatgcttaaa-tacaaaacatgtaatagaggcaa-cttctaaggaaacaatatttggaaatgatg--agtgtgtgtaaaatagtga 27065352  T

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Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 461
Target Start/End: Complemental strand, 45713761 - 45713711
Alignment:
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  45713761 gtgggtgtagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 45713711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 25147591 - 25147640
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||| ||||||||||| || | |||| |||||||||||||||||||||||    
T  25147591 gctgttaatttacaccaacatgaaaatactaaggtgcaagttagcaagct 25147640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 31153725 - 31153778
Alignment:
Q  408 caagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||||||  ||||||| ||| || |||||||||||||||||||| ||||    
T  31153725 caagtgggtgtagcttgctaacttgcaccttagtgtttttaggtgggtgcaagt 31153778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 33580810 - 33580761
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||| |||||||| || |||||| ||||||||||||||    
T  33580810 gctgctaacttacacctacctaaaatcattaaggtacaagttagcaagct 33580761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 38467908 - 38467867
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttag 142  Q
    ||||||||||||||||||  ||||||||||||| ||||||||    
T  38467908 tgctaatttacacccaccccaaaacactaaggtacaagttag 38467867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 44682163 - 44682196
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagtta 141  Q
    |||||||||||||| |||||||||||||||||||    
T  44682163 ttacacccacctaagaacactaaggtgcaagtta 44682196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 93372 - 93408
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  93372 tacacccacctaaaaatactaaggtgtaagttagcaa 93408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 6746529 - 6746477
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||| |  ||||||| ||| || |||||||||||||||||||||||||    
T  6746529 aagtgggtgcagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 6746477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 39905395 - 39905355
Alignment:
Q  168 taaaaacactcttttgtttatattctaattaattttaaata 208  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  39905395 taaaaacacccttttgtttctattcaaattaattttaaata 39905355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 2e-72; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 264 - 458
Target Start/End: Complemental strand, 8625089 - 8624895
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |    
T  8625089 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttggaataatgaaagtgagtgtaaattagtgaaggtttc 8624990  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| || ||| |  ||||| |||||||||    
T  8624989 taacttgcaccttaataatacttataaaaatgagtgtaaataatcaagtgggtgtaggatgctaatttgcaccttaataattttatgtgggtgta 8624895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 264 - 428
Target Start/End: Original strand, 13474797 - 13474961
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  13474797 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttatggaaacaatatttgaaatgataaaagtgggtgtaaattattgaaggttgc 13474896  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||| | |||||||||||||    
T  13474897 taacttgcaccttaagaacacttataaaaatgagtgtaaataatcaagtagatgtatgttgctaa 13474961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 4203273 - 4203126
Alignment:
Q  283 tacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataat 382  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  4203273 tacaatacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgggtgtaaattagtgaaagttgttaacttgcaccttaataat 4203174  T
Q  383 acttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatt 430  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  4203173 acttataaaaatgagtgtaaataatcaagtgggtgtaggttgctaatt 4203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 264 - 458
Target Start/End: Complemental strand, 9479197 - 9479003
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||    
T  9479197 gacaatgacatgcttaaggtataaaacatatgataaagacagacttttaaggaaacaatatttggaatgatgaaagtgggtgttaattagtgaaggttgc 9479098  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||| || |||||| | |||||||| ||| || ||| |  |||||||||||||||    
T  9479097 taacttgcacctttataatacttataaaaataagtgtaaataataaaatgggtgaaggttgctaacttgcaccttaataattttaggtgggtgta 9479003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 42443333 - 42443477
Alignment:
Q  267 aatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaa 366  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |||||| ||||||  ||||||||||||||| |||||||    
T  42443333 aatgacatgcttaag-tacaaaacatgcaataaagacaaacttttaaggaaataatatttggaatgataaaagtggatgtaaattagtgaaggttgctaa 42443431  T
Q  367 cttgcaccttaataatacttataaaaatgagtgtaagtaatcaagt 412  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  42443432 cttgcaccttaataatacttataaaaatgagtgtaaataatcaagt 42443477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 273 - 428
Target Start/End: Original strand, 14124344 - 14124499
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgca 372  Q
    |||||||||| |||||||||||||||  || ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  14124344 atgcttaagggacaaaacatgtaatatggataaactttcaagaaaacaatatttggaatgatgaaagtgagtgtaaattagtgaagtttgctaacttgca 14124443  T
Q  373 ccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
     ||||||||||||||||||||||||||||| ||||| | | |||||| ||||||||    
T  14124444 tcttaataatacttataaaaatgagtgtaaataatcgaataggtgtaggttgctaa 14124499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 1565976 - 1565858
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || |    
T  1565976 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaagtgggtgtaaattagtgaaggttac 1565877  T
Q  364 taacttgcaccttaataat 382  Q
    |||||||||||||||||||    
T  1565876 taacttgcaccttaataat 1565858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 1566140 - 1566012
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||  ||||||||||||||||||||    
T  1566140 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccacttataatttact-aaaacaccattttgtttatattctaatta 1566042  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||| ||||||||||||||    
T  1566041 attttaaatagaaggacaattttgtaacta 1566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 13474633 - 13474761
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| || ||| |||||||||||||||||||||    
T  13474633 gctgctaacttacatccacctaaaaacactaaggtgcaagttagcaagttgcacccacttataatttactagaa-cacccttttgtttatattctaatta 13474731  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||    
T  13474732 attttaaatagaagggcaattttgtaacta 13474761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 264 - 383
Target Start/End: Original strand, 44374520 - 44374639
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| ||||    
T  44374520 gacaatgacatgtttaaggtacaaaacatgtaataaagacaaacttttaaggaaataatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 44374619  T
Q  364 taacttgcaccttaataata 383  Q
    ||| ||||||||||||||||    
T  44374620 taatttgcaccttaataata 44374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 38776625 - 38776499
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaa 199  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||||||    
T  38776625 ctgctaacttacacccacctaaaaatactaaggtgcaagttagcaagctgtacccacttataatttact-aaaacactc-tttgtttatattctaattaa 38776528  T
Q  200 ttttaaatagaagggcaattttgtaacta 228  Q
    |||||||| |||||| |||||||||||||    
T  38776527 ttttaaattgaagggtaattttgtaacta 38776499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 19238301 - 19238422
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||  ||||||||||||||||||||    
T  19238301 gctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataatttact-aaaacaccattttgtttatattctaatta 19238399  T
Q  199 attttaaatagaagggcaatttt 221  Q
    ||||| |||||||||| ||||||    
T  19238400 atttttaatagaagggtaatttt 19238422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 19311485 - 19311606
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||  ||||||||||||||||||||    
T  19311485 gctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataatttact-aaaacaccattttgtttatattctaatta 19311583  T
Q  199 attttaaatagaagggcaatttt 221  Q
    ||||| |||||||||| ||||||    
T  19311584 atttttaatagaagggtaatttt 19311606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 4203446 - 4203318
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||| |||||  | |||||||||||| |||||||  ||||||||||||| ||||||    
T  4203446 gctgctaacttacactcacctaaaaacactaaggtgcaagttagcaagttgcacccatttataatttact-aaaacacctttttgtttatattttaatta 4203348  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||| | ||||||||| ||||    
T  4203347 attttaaatagaatgacaattttgtgacta 4203318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 38776461 - 38776349
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||   ||||||| ||||||| ||||    
T  38776461 gacaatgacatgtttaaggtacaaaacatataataaagacaaacttttaaagaaacaatatttaaaatgatgaaagtagatgtaaatcagtgaaggttgc 38776362  T
Q  364 taacttgcacctt 376  Q
    |||||||||||||    
T  38776361 taacttgcacctt 38776349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 9479351 - 9479233
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| |||||||||||||||||||||||||||||||        ||||||  |||||||||||||||||| |||  ||||||||||||||||||||||    
T  9479351 tgctaacttacacccacctaaaaacactaaggtgcaag--------ctgcacccacttataatttactaaaa-caccattttgtttatattctaattaat 9479261  T
Q  201 tttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||    
T  9479260 tttaaatagaagggcaattttgtaacta 9479233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 458
Target Start/End: Complemental strand, 42907007 - 42906815
Alignment:
Q  268 atgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg--agtgtaaattagt--gaagatt 361  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||  |||||||||||||  |  | ||    
T  42907007 atgacatgcttaaggtataaaacatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatagtgtaaattagtaaggtggtt 42906908  T
Q  362 gctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    || ||    ||  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| ||||||||||||||||    
T  42906907 gcaaa----caatttgataaaatttataaaaatgagtgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgta 42906815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 458
Target Start/End: Original strand, 3469113 - 3469305
Alignment:
Q  268 atgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg--agtgtaaattagt--gaagatt 361  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||  |||||||||||||  |  | ||    
T  3469113 atgacatgcttaaggtataaaacatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatagtgtaaattagtaaggtggtt 3469212  T
Q  362 gctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |  ||    ||  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| ||||||||||||||||    
T  3469213 gtaaa----caatttgataaaatttataaaaatgagtgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgta 3469305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 25107740 - 25107672
Alignment:
Q  352 agtgaagattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtat 420  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25107740 agtgaagattgttaatttgcaccttagtaatacttataaaaatgagtgtaaataatcaagtgggtgtat 25107672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 34347578 - 34347497
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagt 354  Q
    |||||||| ||||||||||| ||||| |||||||||||||| ||||||||| ||  ||||||||||||| ||||||||||||    
T  34347578 atgcttaaagtacaaaacatataatagagacaaacttttaatgaaacaatacttagaatgatgaaagtgggtgtaaattagt 34347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 9478954 - 9479003
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9478954 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagct 9479003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 456
Target Start/End: Complemental strand, 30806082 - 30805936
Alignment:
Q  308 ttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattg--ctaacttgcaccttaataatacttataaaaatgagtgtaagta 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |   ||| |   |  || |||| | |||||||||||||||||| ||    
T  30806082 ttttaaggaaacaatatttggaatgatgaaagtgagtgtaaattagtg-agataggtgtaaat---aatttgataaaatttataaaaatgagtgtaaata 30805987  T
Q  406 atcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtg 456  Q
    ||||||||| |||| |||||||| ||  |||||| || || ||||||||||    
T  30805986 atcaagtggatgtaggttgctaacttacactttaatgattctaggtgggtg 30805936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 44374415 - 44374484
Alignment:
Q  158 tataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||||||||||   ||||||||||||||    
T  44374415 tataatttactaaaat-actcttttttttatattctaattaattttaaatagaaatacaattttgtaacta 44374484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 1565796 - 1565845
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  1565796 gctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagct 1565845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 3469003 - 3469079
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  3469003 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 3469079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 40304668 - 40304619
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  40304668 gctgctaacttgcacccacctaaaaacactaaggtgcaagttagcaagct 40304619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 8625164 - 8625125
Alignment:
Q  189 attctaattaattttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8625164 attctaattaattttaaatagaagggcaattttgtaacta 8625125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 15438445 - 15438390
Alignment:
Q  279 aaggtaca-aaacatgtaataaagacaaacttttaaggaaacaatatttgaaatga 333  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  15438445 aaggtacacaaacatgtaataaagataaacttttaaggaaacaatatttggaatga 15438390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 15529749 - 15529694
Alignment:
Q  279 aaggtaca-aaacatgtaataaagacaaacttttaaggaaacaatatttgaaatga 333  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  15529749 aaggtacacaaacatgtaataaagataaacttttaaggaaacaatatttggaatga 15529694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 25113153 - 25113110
Alignment:
Q  102 gctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  25113153 gctaacttacacccacctaaaaacactaaggtgcaagttagcaa 25113110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 961438 - 961397
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagtta 141  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  961438 ctgctaacttacacccacctaaaaacactaaggtgcaagtta 961397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 15438234 - 15438185
Alignment:
Q  379 taatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15438234 taatacttataaaaatgagtataaataatcaagtgggtgtaagttgctaa 15438185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 15529538 - 15529489
Alignment:
Q  379 taatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15529538 taatacttataaaaatgagtataaataatcaagtgggtgtaagttgctaa 15529489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 24478353 - 24478304
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaa 349  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  24478353 agacaaacttttaaggaaataatatttagaatgatgaaagtgagtgtaaa 24478304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 42907117 - 42907041
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||| ||||||||||||  ||||||||||    
T  42907117 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaattgaagggcaatttcttaactatctt 42907041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 8624846 - 8624889
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttag 142  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  8624846 gctgctaacttacactcacctaaaaacactaaggtgcaagttag 8624889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 25106946 - 25106993
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  25106946 tgctaacttacatccacctaaaaacactaaggtacaagttagcaagct 25106993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 25113098 - 25113149
Alignment:
Q  410 agtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||| |||||||| ||| || |||||||||||||||||||||||||    
T  25113098 agtgggtgtaggttgctaacttgcaccttagtgtttttaggtgggtgtaagt 25113149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 42443019 - 42443089
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaa 172  Q
    |||||| |||||||| | |||||||| ||||||||||||||||||||||||   | ||||||||||||||||    
T  42443019 tgctaacttacaccctc-taaaaacattaaggtgcaagttagcaagctgcatccatttataatttactaaaa 42443089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 1554346 - 1554281
Alignment:
Q  135 caagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaatt 201  Q
    |||||||||||| |||||  |||||||||||||| |||||||  |||| ||||||||||||||||||    
T  1554346 caagttagcaagttgcacccacttataatttact-aaaacaccattttatttatattctaattaatt 1554281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 6149145 - 6149095
Alignment:
Q  301 gacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatt 351  Q
    |||||| ||||||| |||||||||||||||||||| ||||| |||||||||    
T  6149145 gacaaatttttaagaaaacaatatttgaaatgatggaagtgggtgtaaatt 6149095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 34347738 - 34347608
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||| ||||| |||||||||||||  ||| ||  || || |||||||||| |||  ||||||| |||| ||||| |||  |||||||| |||||||||||    
T  34347738 gctgttaattcacacccacctaaa--cacgaatttgtaaattagcaagctacacccacttatattttattaaaa-caccattttgtttctattctaatta 34347642  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | ||||| ||||| | |||||||||||| |||||    
T  34347641 aatttaattagaatgacaattttgtaaccatctt 34347608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 24478203 - 24478258
Alignment:
Q  330 atgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatactt 386  Q
    |||||||||||| |||||||||||| ||| |||||||||| ||| ||||||||||||    
T  24478203 atgatgaaagtgggtgtaaattagttaaggttgctaactt-cacattaataatactt 24478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 42443286 - 42443321
Alignment:
Q  176 ctcttttgtttatattctaattaattttaaatagaa 211  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42443286 ctcttttgtttatattctaattaatttcaaatagaa 42443321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 461
Target Start/End: Complemental strand, 9479011 - 9478961
Alignment:
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  9479011 gtgggtgtagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 9478961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 14124570 - 14124532
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  14124570 ttacatccacctaaaaacactaaagtgcaagttagcaag 14124532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 42443568 - 42443526
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  42443568 ctaacttacacccacctaaaaacattaagatgcaagttagcaa 42443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 961391 - 961354
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  961391 ttacacccacctaaaattactaaggtgcaagttagcaa 961354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 3469353 - 3469305
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||    
T  3469353 gctgctaatttacacccacct-aaatcactaaggtgtaaattagcaagct 3469305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 4203050 - 4203095
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||| |||||| |||||||||| |||||||||||| ||||||||||    
T  4203050 ctaacttacactcacctaaaaatactaaggtgcaaattagcaagct 4203095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 25107000 - 25106951
Alignment:
Q  412 tgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||  ||||||| |||||| ||||||||||||||||| |||||||    
T  25107000 tgggtgtagcttgctaacttgtaccttagtgtttttaggtggatgtaagt 25106951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 1566081 - 1566133
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||| |  ||||||| ||| || |||||||||||||||||||||||||    
T  1566081 aagtgggtgcagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 1566133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 3469305 - 3469269
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  3469305 tacacccacctaaaaatactaaggtgtaagttagcaa 3469269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 42906815 - 42906851
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  42906815 tacacccacctaaaaatactaaggtgtaagttagcaa 42906851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 264 - 458
Target Start/End: Original strand, 18053509 - 18053703
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  18053509 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaagaaaacaatatttggaatgatgaaagtgagtgtaaattagtgaaggttgc 18053608  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||| ||| || ||| |  |||||||||||||||    
T  18053609 taacttgcaccttaataatatttataaaaatgagtgtaaataatcaagtggatgtaagttgctaacttgcaccttaataattttaggtgggtgta 18053703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 6851974 - 6851829
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtg 399  Q
    |||||||||||||| |||| |||||||| ||||||||||||| |||||||||||| || |||| |||||||||||||||| |||||||||||||| ||||    
T  6851974 agacaaacttttaaagaaataatatttggaatgatgaaagtgggtgtaaattagtaaatattgttaacttgcaccttaattatacttataaaaataagtg 6851875  T
Q  400 taagtaatcaagtgggtgtatgttgctaatttgtactttagtgttt 445  Q
    ||| |||||||||| ||||| |||||||| ||| || |||||||||    
T  6851874 taaataatcaagtgagtgtaggttgctaacttgcaccttagtgttt 6851829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 13865945 - 13865857
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  13865945 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaatgaaacaatatttagaatgatgaaagtgagtgtaaatta 13865857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 33483460 - 33483552
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||| | ||||||  |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  33483460 gacaatgacaggcttaatatacaaaacatgtaatagagacaaactttcaaggaaacaatatttggaatgatgaaagtgggtgtaaattagtga 33483552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 18053404 - 18053473
Alignment:
Q  158 tataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18053404 tataatttactaaaa-cactcatttgtttatattctaattaattttaaatagaagggcaattttgtaacta 18053473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 18052888 - 18052955
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataattta 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  18052888 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaaactgcacccacttataattta 18052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 18053748 - 18053703
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  18053748 ctaacttatacccacctaaaaacactaaggtgcaagttagcaagct 18053703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 31730557 - 31730502
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||    
T  31730557 agacaaacttttaag-aaacaatatgttaaatgatgaaagtgggtgtaaattagtga 31730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 20468753 - 20468684
Alignment:
Q  104 taatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaa 173  Q
    |||||||||||||||  |||||||||| |||||||||| |||| | |||| |||| || |||||||||||    
T  20468753 taatttacacccaccccaaaacactaaagtgcaagttatcaaggtacacgtacttgtattttactaaaaa 20468684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 31730475 - 31730402
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||| ||||||||||| |||| |||| ||| ||| | |||| |  |||||||||||||||    
T  31730475 ttataaaaatgagtgtaaataatcaagtggatgtaagttgataacttgcattttaataattttaggtgggtgta 31730402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 20468525 - 20468451
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||| ||||||| |||| ||||||||||||  | |||| ||| |||||| |  ||||||||||||||||    
T  20468525 ttataaaaataagtgtaaataattaagtgggtgtataattctaacttgcactttaataattttaggtgggtgtaa 20468451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 33483351 - 33483385
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggt 133  Q
    |||| ||||||||||||||||||||||||||||||    
T  33483351 gctgttaatttacacccacctaaaaacactaaggt 33483385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 18052947 - 18052895
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||| |  ||||||| ||| || |||||||||||||||||||||||||    
T  18052947 aagtgggtgcagtttgctaacttgcaccttagtgtttttaggtgggtgtaagt 18052895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 20240079 - 20240135
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||| |||||| ||| |||| ||||||||||||||| || |||||||| |||||    
T  20240079 agacaaatttttaaagaagcaatgtttgaaatgatgaaaatgggtgtaaatcagtga 20240135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 22134063 - 22134119
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||| |||||| ||| |||| ||||||||||||||| || |||||||| |||||    
T  22134063 agacaaatttttaaagaagcaatgtttgaaatgatgaaaatgggtgtaaatcagtga 22134119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 22141416 - 22141472
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||| |||||| ||| |||| ||||||||||||||| || |||||||| |||||    
T  22141416 agacaaatttttaaagaagcaatgtttgaaatgatgaaaatgggtgtaaatcagtga 22141472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 6e-66; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 264 - 459
Target Start/End: Complemental strand, 37553306 - 37553111
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||||||||||||||  || |    
T  37553306 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaaagaaacaatatttgaaacgatgaaaatgggtgtaaattagtgaatgttac 37553207  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||||||| |||||||||||||||||||| ||  |||||||||||||||| |||||||| ||| || ||||||||||||| |||||||||    
T  37553206 taacttgcaccttattaatacttataaaaatgagtatagataatcaagtgggtgtaggttgctaacttgcaccttagtgtttttagatgggtgtaa 37553111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 265 - 458
Target Start/End: Original strand, 508592 - 508778
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgct 364  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |    
T  508592 acaatgacatgcttaaggtacaaaatatgtaataaagacaaacttttaaggaaacaatatttgaaatgataaaagtgagtgtaaattagtgaaggttgtt 508691  T
Q  365 aacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    ||       ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| || |||||  |||||||||| ||||    
T  508692 aa-------cttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgtttgtaacttgcaccttagtaattttaggtggatgta 508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 508355 - 508555
Alignment:
Q  23 aactaggttggcacctatgtgaaacatcatcctttatcgagtctcataaaataagtatnnnnnnnnnnnnnnnnnngctgctaatttacacccacctaaa 122  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||                  |||| ||| |||||||||||||||    
T  508355 aactaggttggcacctatctgaaacctcatcctttgtcgagtctcataaaataagtattataatatatatat----gctgttaacttacacccacctaaa 508450  T
Q  123 aacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttg 222  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  508451 aacactaaggtgcaagttagcaagctgcaccgacttataatttact-aaaacactcttttgtttatattctaattaattttaaatagaagggcaattttg 508549  T
Q  223 taacta 228  Q
    ||||||    
T  508550 taacta 508555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 264 - 461
Target Start/End: Original strand, 13413950 - 13414147
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||    
T  13413950 gacaatgacatgtttaaagtacaaaacatataataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgggtgtaaattagtaaaatttgc 13414049  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||| || ||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||  || ||| |  ||| ||||||||||||||    
T  13414050 taatttacaccttaataatacttataaaaacgaatgtaaataataaagtgggtgtatgttgctaatttacaccttaataatttaaggtgggtgtaagt 13414147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 264 - 459
Target Start/End: Complemental strand, 49901503 - 49901309
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  49901503 gacaatgaaatgtttaaggtacaaaatatgtaataaagacaaacttttaaaaaaacaatatttgaaatgatgaaagtggg-gtaaattattgaaggttgc 49901405  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||  |||| |||||||| ||| || ||| |  |||||||||| |||||    
T  49901404 taacttgcaccttaataatacttataaaaatgagtgtaaataatcaaatgaatgtaggttgctaacttgaaccttaataattttaggtggatgtaa 49901309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 37553470 - 37553342
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  37553470 gctgctaacttacatccacctaaaaatactaaggtgcaagttagcaagctgcaccgacttataatttact-aaaacactcttttgtttatattctaatta 37553372  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||| |||||||||||||    
T  37553371 attttaaatagaagggaaattttgtaacta 37553342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 264 - 402
Target Start/End: Complemental strand, 30694504 - 30694366
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaactttta-aggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattg 362  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||| |||||| ||||||||  |||    
T  30694504 gacaatgacatgcttaacgtacaaaacatgtaataaagacaaacttttacaagaaacaatatttagaatgatgaaagtgggtgtaa-ttagtgaatgttg 30694406  T
Q  363 ctaacttgcaccttaataatacttataaaaatgagtgtaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30694405 ctaacttgcaccttaataatacttataaaaatgagtgtaa 30694366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 49901667 - 49901542
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||| || ||||| |||||||||||||||    
T  49901667 gctgctaacttacacccacctaaaaacactaaggtgcaagtaagcaagctgcacccacttataatttact-aaaagacccttttatttatattctaatta 49901569  T
Q  199 attttaaatagaagggcaattttgtaa 225  Q
    ||||||||||||| | |||||||||||    
T  49901568 attttaaatagaatgacaattttgtaa 49901542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 13413790 - 13413914
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattt 202  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||   |||||||||||||| |||||||  ||||||||||||||||||||||||    
T  13413790 ctaacttacatccacctaaaaacattaaggtgcaagttagcaagctgcaaccacttataatttact-aaaacaccattttgtttatattctaattaattt 13413888  T
Q  203 taaatagaagggcaattttgtaacta 228  Q
    ||||||||| |||| |||||||||||    
T  13413889 taaatagaatggcagttttgtaacta 13413914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 36018131 - 36018037
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaag 358  Q
    |||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  36018131 gacaatgacatgtttaaggtacaaaacatgtaatagagacaaatttttaaggaaacaatatttgaaatgataaaagtgggtgcaaattagtgaag 36018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 302 - 424
Target Start/End: Original strand, 34503680 - 34503803
Alignment:
Q  302 acaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttat-aaaaatgagtgt 400  Q
    |||||||||||| || |||||||||| |||||||||| ||  | ||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| |    
T  34503680 acaaacttttaatgatacaatatttggaatgatgaaaatggatataaattagtgaaggttgctaaattgcaccttaataatacttataaaaaataagtat 34503779  T
Q  401 aagtaatcaagtgggtgtatgttg 424  Q
    || |||||||||||||||| ||||    
T  34503780 aaataatcaagtgggtgtaggttg 34503803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 265 - 458
Target Start/End: Original strand, 35760352 - 35760548
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtga---gtgtaaattagtgaaga 359  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  |||||||||||   |||||||||||| ||||    
T  35760352 acaatgacatgcttaaggtataaaacatgtaatacagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatcggtgtaaattagt-aaga 35760450  T
Q  360 ttgc--taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgt 457  Q
    | ||  |||    ||  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| |||||||||||||||    
T  35760451 tggctgtaa---acaatttgataaaatttataaaaatgagtgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgt 35760547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 3979813 - 3979733
Alignment:
Q  269 tgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaa 349  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  3979813 tgatatgcttaaggtacaaaacatgtaatagagataaacttttaaggaaacaatagttggaatgatgaaagtgggtgtaaa 3979733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 46835130 - 46835204
Alignment:
Q  282 gtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||    
T  46835130 gtacaaaacatgtaatagagacaaacttttaaacaaataatatttgaaatgatgaaagtgggtgtaaattagtga 46835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 458
Target Start/End: Complemental strand, 27055872 - 27055676
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg---agtgtaaattagt--gaa 357  Q
    ||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||||  |||  ||||||||||   |||||||||||||  |      
T  27055872 acaatgacatgcttaaggtataaaatatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgataagtgtaaattagtaaggt 27055773  T
Q  358 gattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgt 457  Q
    | |||  ||    ||  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| |||||||||||||||    
T  27055772 ggttgtaaa----caatttgataaaatttataaaaatgagtgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgt 27055677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 30694634 - 30694540
Alignment:
Q  133 tgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||  |||||||||||| ||| | ||| |||||||||||||| |||||||||||||||| |||| || |||||||||||    
T  30694634 tgcaagttagcaagctgcacccacttataatttattaata-cacccttttgtttatattataattaattttaaataaaaggacagttttgtaacta 30694540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 459
Target Start/End: Original strand, 32708893 - 32709082
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga--agatt 361  Q
    |||||||| ||  ||||| ||||||||||||||||  |||||||||||||| ||| |||||||| ||| ||||||||| ||||||||||||||   || |    
T  32708893 gacaatgacatatttaagatacaaaacatgtaata--gacaaacttttaagaaaataatatttggaatcatgaaagtgggtgtaaattagtgaggtgagt 32708990  T
Q  362 gctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    || ||    ||  || |||| | |||||||||||||| ||  ||||||||||| ||||||||||||| ||  || ||||||||||||| || ||||||    
T  32708991 gcaaa----caatttgataaaatttataaaaatgagtata--taatcaagtggatgtatgttgctaacttacaccttagtgtttttagatgagtgtaa 32709082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 14188695 - 14188748
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcac 152  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  14188695 gctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagctgcac 14188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 32151830 - 32151781
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32151830 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagct 32151781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 36018295 - 36018163
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||| |||||||||||||| |||||||||||| ||| || ||| ||| || |||  ||||||| |||||| |||||||  |||| ||| |||| ||||||    
T  36018295 gctgttaatttacacccacttaaaaacactaacgtgtaaattaacaaactacacccacttatattttact-aaaacaccattttatttctattttaatta 36018197  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | ||||||||||| | || |||||||||||||||    
T  36018196 aatttaaatagaatgacagttttgtaactatctt 36018163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 52853949 - 52853900
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52853949 gctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagct 52853900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 10920705 - 10920642
Alignment:
Q  277 ttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagt 340  Q
    |||| |||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||    
T  10920705 ttaatgtacaaaacatgtaatagggacaaactttcaaggaaacaatatttaaaatgatgaaagt 10920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 24656435 - 24656356
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    |||||| || || |||||||||||||   |||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  24656435 atgctttagatagaaaacatgtaatatgaacaaacttttaaggtaataatatttgaaatgatgaatgtgagtgtaaatta 24656356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 29119212 - 29119293
Alignment:
Q  277 ttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg--agtgtaaattagt 354  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||  |||||||||||||    
T  29119212 ttaaggtataaaacatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatagtgtaaattagt 29119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 46435314 - 46435407
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg--agtgtaaattagt 354  Q
    ||||||| |||  ||||||| ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||  |||||||||||||    
T  46435314 acaatgacatgtctaaggtataaaacatgtaatagagacaaacttttaaggaaacaatatttagaatgagatgaaagtgatagtgtaaattagt 46435407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 24657166 - 24657092
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaa 173  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||  |||  ||||||| |||||||||||    
T  24657166 gctgctaatttacactcacctcaaaacactaagatgcaagttagcaagccacacccacttatattttactaaaaa 24657092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 508839 - 508880
Alignment:
Q  474 cacagagacagacacaagaggaggggtgggggtatatataca 515  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  508839 cacagagacagacacaagaggaggggtgggggtatatataca 508880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 27055985 - 27055909
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  27055985 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 27055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 46435206 - 46435282
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  46435206 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 46435282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 12458576 - 12458529
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||    
T  12458576 gctgctaatttacacccacctaaaaacactaaggtgtaaattagcaag 12458529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 26214060 - 26214006
Alignment:
Q  302 acaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||    
T  26214060 acaaacttttaagaaaataatattttaaatgatgaaagtgggtgtaaattagtga 26214006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 29119092 - 29119168
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| |||||||||||||| |||||  ||||||||||    
T  29119092 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggaaatttcttaactatctt 29119168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 35760267 - 35760320
Alignment:
Q  179 ttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  35760267 ttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 35760320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 34503877 - 34503837
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34503877 ttacacccacctaaaaacactagggtgcaagttagcaagct 34503837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 461
Target Start/End: Original strand, 508781 - 508820
Alignment:
Q  422 ttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  508781 ttgctaacttgtactttagtgtttttaggtgggtgtaagt 508820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 350
Target Start/End: Complemental strand, 27413790 - 27413755
Alignment:
Q  315 gaaacaatatttgaaatgatgaaagtgagtgtaaat 350  Q
    ||||||||||||||||||||||||||||||||||||    
T  27413790 gaaacaatatttgaaatgatgaaagtgagtgtaaat 27413755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 12458454 - 12458528
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||||| || ||||||| |||||||| |||| ||| ||| || ||| || ||||||||||||||||    
T  12458454 ttataaaaatgagtgcaaataatcaaatgggtgtaagttggtaacttgcaccttaatgattttaggtgggtgtaa 12458528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 24656589 - 24656509
Alignment:
Q  281 ggtacaaaacatgtaataaagacaaacttttaaggaaa---caatatttgaaatgatgaaagtgagtgtaaattagtgaag 358  Q
    |||| |||||||||||||   |||||||||||||||||   ||||||||| |||||| ||| || ||||||||||||||||    
T  24656589 ggtagaaaacatgtaatatgaacaaacttttaaggaaaaaacaatatttggaatgataaaaatgggtgtaaattagtgaag 24656509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 26089563 - 26089605
Alignment:
Q  308 ttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaat 350  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  26089563 ttttaaggaaacaatatttagaatgatgaaagtgagtgtaaat 26089605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 29119575 - 29119529
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  29119575 gctgctaatttacacccacttaaaaatactaaggtgtaagttagcaa 29119529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 37553111 - 37553148
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  37553111 ttacacccatctaaaaacactaaggtgcaagttagcaa 37553148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 24656344 - 24656301
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||    
T  24656344 ttataaaaatgagtataaataattaagtgggtgtatgttgctaa 24656301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 52594866 - 52594925
Alignment:
Q  170 aaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactat 229  Q
    |||||||  |||| ||| |||||||||||| |||||| |||||| |||||||||||||||    
T  52594866 aaaacaccattttatttttattctaattaaatttaaacagaaggacaattttgtaactat 52594925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 3979718 - 3979644
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||||||||||  ||| ||||||||||||  ||||||||||  ||   | |||||||||||||||||||    
T  3979718 ttataaaaatgagtgtatataaccaagtgggtgtagcttgctaatttacaccaaaatgtttttaggtgggtgtaa 3979644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 461
Target Start/End: Original strand, 32151773 - 32151823
Alignment:
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  32151773 gtgggtgtagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 32151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 46435640 - 46435694
Alignment:
Q  404 taatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||| |||||||| ||  || ||||| ||||||||||||||||    
T  46435640 taatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgta 46435694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 46832709 - 46832786
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaatt-aattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||| ||||| ||||||||  ||| |||||||||||||||    
T  46832709 acttatattttactaaaa-caccattttgtttctattctaattaaatttaaaatagaaatgcagttttgtaactatctt 46832786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 46835350 - 46835304
Alignment:
Q  102 gctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||||||| |||||||||||| ||||||| || ||||||||||    
T  46835350 gctaatttacacacacctaaaaacattaaggtgtaaattagcaagct 46835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 52853365 - 52853410
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  52853365 gctgctaacttacacccac-taaaaacactaaggtgcaggttagcaa 52853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 508818 - 508781
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||||||||||||||||| || |||||||||||    
T  508818 ttacacccacctaaaaacactaaagtacaagttagcaa 508781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 10920621 - 10920548
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||| |||| ||||| | ||| |||||||| ||| || ||| |  |||||||||||||||    
T  10920621 ttataaaaatgagtgtaaataattaagtgagcgtaggttgctaacttgcaccttaataattttaggtgggtgta 10920548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 26089631 - 26089684
Alignment:
Q  375 ttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    ||||||| |||||||||| ||||||||| |||| |||||||||||  |||||||    
T  26089631 ttaataaaacttataaaagtgagtgtaaataattaagtgggtgtaaattgctaa 26089684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 27055628 - 27055676
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||    
T  27055628 gctgctaatttacacccacct-aaatcactaaggtgtaaattagcaagct 27055676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 32709086 - 32709045
Alignment:
Q  104 taatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||| || ||||||||||||||||| ||||||||||    
T  32709086 taatttacactcatctaaaaacactaaggtgtaagttagcaa 32709045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 46435742 - 46435694
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||    
T  46435742 gctgctaatttacacccacct-aaatcactaaggtgtaaattagcaagct 46435694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 459
Target Start/End: Original strand, 12458519 - 12458567
Alignment:
Q  411 gtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||  ||||||||||  || |||||||||||||||||||||||    
T  12458519 gtgggtgtaacttgctaatttacaccttagtgtttttaggtgggtgtaa 12458567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 27055676 - 27055712
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  27055676 tacacccacctaaaaatactaaggtgtaagttagcaa 27055712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 35760548 - 35760512
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  35760548 tacacccacctaaaaatactaaggtgtaagttagcaa 35760512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 46435694 - 46435658
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  46435694 tacacccacctaaaaatactaaggtgtaagttagcaa 46435658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 264 - 461
Target Start/End: Original strand, 280486 - 280683
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| |||| |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||    
T  280486 gacaatgacatgtttaaagtacaaaacatgtaataacgaaaaacttttaaggaaataatatttgaaatgatgaaagtgggtgtaaattagtgaaatttgc 280585  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||| || |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| |  ||||||||||||||||||    
T  280586 taatttacaccttaataatacttataaaaatgaatgtaaataataaagtgggtgtatgttgctaatttgcactttaataattttaggtgggtgtaagt 280683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 280322 - 280454
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||   |||||||||||||| |||||||  ||||||||||||||||||||    
T  280322 gctgctaacttacatccacctaaaaacattaaggtgcaagttagcaagctgcatccacttataatttact-aaaacaccattttgtttatattctaatta 280420  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||||||||| |||| |||||||||||||||    
T  280421 attttaaatagaatggcagttttgtaactatctt 280454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 264 - 459
Target Start/End: Original strand, 3670708 - 3670903
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||    
T  3670708 gacaatgacatgcttaaggtacaaaacatataataaagacaaatttttaaggaaataatatttgaaatgatgaaactgggtgtaaattaatgaaggttgc 3670807  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||| ||| || ||| |  | ||||||||||||||    
T  3670808 taacttgcaccttaataatacttataaaaataagtgtaaataatcaagtgggtgtaggttgctaacttgcaccttaataatattaggtgggtgtaa 3670903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 264 - 458
Target Start/End: Complemental strand, 31659524 - 31659330
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  31659524 gacaatgacatgcttaaggtacaaaacatataataaagacaaacttttaaagtaacaatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 31659425  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    | |||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||| || ||| |  ||||| |||||||||    
T  31659424 tgacttgcacctgaataatacttataaaaatgagtataaataatcaagtgggtgtaggttgctaacttgcaccttaataattttatgtgggtgta 31659330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 266 - 402
Target Start/End: Complemental strand, 13829310 - 13829174
Alignment:
Q  266 caatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgcta 365  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||  ||||||    
T  13829310 caatgacatgcttaaggtacataacttgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaagtggatgtaaattagtgaatgttgcta 13829211  T
Q  366 acttgcaccttaataatacttataaaaatgagtgtaa 402  Q
    |||||||||||||||||||||||||||||||||||||    
T  13829210 acttgcaccttaataatacttataaaaatgagtgtaa 13829174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 13829805 - 13829678
Alignment:
Q  101 tgctaatttacacccacctaaaa-acactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaa 199  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||    
T  13829805 tgctaacttacacccacctaaaacacactaaggtgcaagttagcaagctgcacccacttataatttgctaaaa-cacccttttgtttatattctaattaa 13829707  T
Q  200 ttttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||||||||||||||||    
T  13829706 ttttaaatagaagggcaattttgtaacta 13829678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 31659685 - 31659559
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||||||     
T  31659685 tgctaacttacatccacctaaaaatactaaggtgcaagttagcaagctgcacccacttataatttact-aaaacacccttttgtttatattctaattaaa 31659587  T
Q  201 tttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||    
T  31659586 tttaaatagaagggcaattttgtaacta 31659559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 458
Target Start/End: Original strand, 10862899 - 10863091
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga--agatt 361  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   || |    
T  10862899 gacaatgacatgcttaaggtacaaaacatgtaataaggacaaacttttaaggaaacaatatttgaaatgatgaaagtgggtgtaaattagtgaggtgagt 10862998  T
Q  362 gctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |  ||    ||  || |||| | |||||||||||||||||  |||||||||||||||| |||||||| ||  || || |||||||||||||||||||    
T  10862999 gtaaa----caatttgataaaatttataaaaatgagtgtacataatcaagtgggtgtaggttgctaacttacaccttggtgtttttaggtgggtgta 10863091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 10862737 - 10862869
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| |||  ||||||| |||||| ||||||| ||||||||| |||||||||||    
T  10862737 gctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagctacacccacttatattttact-aaaacacccttttgtttctattctaatta 10862835  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | |||||||||||||||| |||||||||||||||    
T  10862836 aatttaaatagaagggcagttttgtaactatctt 10862869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 6831501 - 6831620
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtg-aagattg 362  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||| ||| |||    
T  6831501 gacaatgacatgtttaaggtacaaaacatgtaataaagacaaacttgtaaagaaacaatatttggaatgatgaaagtgggtgtaaattagtgaaaggttg 6831600  T
Q  363 ctaacttgcaccttaataat 382  Q
    ||||||||||||||||||||    
T  6831601 ctaacttgcaccttaataat 6831620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 6831354 - 6831478
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||||||||| ||||||||||     ||||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||    
T  6831354 gctgctaacttacacccaccaaaaaacactat----caagttagcaagctgcacccacttataatttactaaaa-cacccttttgtttatattctaatta 6831448  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||    
T  6831449 attttaaatagaagggcaattttgtaacta 6831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 3670545 - 3670665
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||| |||  |||||||||||||||||||||||||||| ||||   |||||||||||||||||| ||| |||||||||||||||||||||    
T  3670545 gctgctaacttacatccaattaaaaacactaaggtgcaagttagcaagttgcatccacttataatttactaaaa-cacccttttgtttatattctaatta 3670643  T
Q  199 attttaaatagaagggcaattt 220  Q
    ||||||||||||||||||||||    
T  3670644 attttaaatagaagggcaattt 3670665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 428
Target Start/End: Complemental strand, 30712272 - 30712144
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtg 399  Q
    |||||||||||||| ||||||| ||||  |||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||| |||||    
T  30712272 agacaaacttttaatgaaacaacattttgaatgatgaaaatgagtgtaaattaatgaagtttgttaacttgcaccttaataatatttataaaaaggagtg 30712173  T
Q  400 taagtaatcaagtgggtgtatgttgctaa 428  Q
    ||| |||||||||| ||||| ||||||||    
T  30712172 taaataatcaagtgagtgtaggttgctaa 30712144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 23386935 - 23386840
Alignment:
Q  324 tttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgta 419  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| ||||| |||||    
T  23386935 tttgaaatgatgaaagtggatgtaaattagtgaaggttgctaacttgcactttaataatacttataaaaatgagtgtaaataattaagtgagtgta 23386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 44021349 - 44021217
Alignment:
Q  326 tgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgc 425  Q
    |||||||||||||||| |||||| ||||||||  |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||||||  ||||    
T  44021349 tgaaatgatgaaagtgggtgtaatttagtgaatgttgctaacttacaccttaataatatttataaaaatgagtgtaaataatcaaataggtgtagattgc 44021250  T
Q  426 taatttgtactttagtgtttttaggtgggtgta 458  Q
    ||| ||| || ||| |  |||||||||||||||    
T  44021249 taacttgcaccttaataattttaggtgggtgta 44021217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 14798908 - 14798831
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtg 341  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||    
T  14798908 gacaatgacatgcttaagatacaaaacatgtaatagagacaaacttttaaggaaacaatatttagaacgatgaaagtg 14798831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 3677459 - 3677534
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaac 174  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  3677459 gctgctaccttacacccacttaaaaacactaaggtgcaagttagcaagctacacctacttatattttactaaaaac 3677534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 9792176 - 9792257
Alignment:
Q  276 cttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttga-aatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||||||||| |||||||||| ||||||||| |||| ||||||||||| | |||||||||||||  |||||||||||||    
T  9792176 cttaaggtacaaagcatgtaataaggacaaacttataagaaaacaatattttagaatgatgaaagtggatgtaaattagtga 9792257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 6831683 - 6831634
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  6831683 gctgctaacttacacccacctaaaaacaccaaggtgcaagttagcaagct 6831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 3670951 - 3670904
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  3670951 gctgctaatttacacccacctaaaaatattaaggtgcaagttagcaag 3670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 13293949 - 13293866
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||| |||||||||||   ||||||| ||||||| |||||||||||||||| || |||||| ||| || ||||||||||||||    
T  13293949 atgctcaaggtacaaaattagtaataatgacaaacatttaaggaaacaatatctggaatgataaaaatgtgtgtaaattagtga 13293866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 29404155 - 29404225
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaa 170  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||  |||| || ||||||||    
T  29404155 gctgctaacttacacccacctaaaaacactaa-gtgcaagttagcaagctacacccacttgtattttactaa 29404225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 3678151 - 3678077
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaa 173  Q
    |||| ||| ||||||||||||||||| |||||||| |||||||| ||||| |||  ||||||| |||||||||||    
T  3678151 gctgttaacttacacccacctaaaaatactaaggtacaagttagtaagctacacccacttatattttactaaaaa 3678077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 36911553 - 36911427
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||||||||||| ||||||||| | |||||||||| |||| ||||| ||||      || | ||||||||   || |||||||| |||||||||||    
T  36911553 gctgctaatttacacctacctaaaaatattaaggtgcaaattagtaagctacacg------tattctactaaaacatct-ttttgtttctattctaatta 36911461  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | |||||||| || |||| |||||||||||||||    
T  36911460 aatttaaataaaatggcagttttgtaactatctt 36911427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 10863140 - 10863095
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagca 144  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  10863140 gctgctaatttacacccacctaaaaacactaaggtgtaaattagca 10863095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 14798994 - 14798941
Alignment:
Q  179 ttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    |||| ||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  14798994 ttttatttctattctaattaaatttaaatagaagggcagttttgtaactatctt 14798941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 36911401 - 36911340
Alignment:
Q  295 aataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||| ||||||||||| |||||||||||||||  ||||||||||||| |||||||| |||||    
T  36911401 aatagagacaaactttgaaggaaacaatattttgaatgatgaaagtgggtgtaaatcagtga 36911340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 30712065 - 30712112
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  30712065 gctgctaacttacactcacctaaaatcactaaggtgcaagttagcaag 30712112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 32275883 - 32275834
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| |||||||||||  ||||||| ||||||||||||||||||||    
T  32275883 gctgctaacttacacccaccccaaaacacgaaggtgcaagttagcaagct 32275834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 39443433 - 39443360
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaa 172  Q
    |||||||| ||| | ||||||||||||||||||||||||||||  |||| | ||  ||| ||||||||||||||    
T  39443433 gctgctaacttatatccacctaaaaacactaaggtgcaagttaataagcagtacccactcataatttactaaaa 39443360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 16242297 - 16242345
Alignment:
Q  304 aaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    |||||||||| |||||||||||||||||||||||| ||  |||||||||    
T  16242297 aaacttttaatgaaacaatatttgaaatgatgaaaatggatgtaaatta 16242345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 42182725 - 42182765
Alignment:
Q  105 aatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  42182725 aatttacacccacctaaaaacactaaggtgtaaattagcaa 42182765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 9792435 - 9792389
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||||||||||||| |||||| ||||||||| || |||||||    
T  9792435 gctgctaatttacacccacttaaaaatactaaggtgtaaattagcaa 9792389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 459
Target Start/End: Complemental strand, 10862796 - 10862746
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||||||  ||||||||||  || |||||||||||||||||||||||    
T  10862796 aagtgggtgtagcttgctaatttacaccttagtgtttttaggtgggtgtaa 10862746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 29513263 - 29513362
Alignment:
Q  114 ccacctaaaaacactaa---ggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaataga 210  Q
    |||||||||||||||||   ||||||||||||||||||||||  |||  | ||||||  | ||||| ||||||| |||| || ||||||||||||| |||    
T  29513263 ccacctaaaaacactaaagtggtgcaagttagcaagctgcacctactagttatttac-cataacacccttttgtctatactcaaattaattttaaaaaga 29513361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 31659283 - 31659330
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  31659283 gctgctaacttacacccacctaaatac--taaggtgcaagttagcaagct 31659330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 36469940 - 36469894
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||| || || |||| |||||||||||||||||||||||||||    
T  36469940 gctgctaacttgcatccacttaaaaacactaaggtgcaagttagcaa 36469894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 39443444 - 39443486
Alignment:
Q  186 tatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  39443444 tatattctagttaattttaaatagaatgtcaattttgtaacta 39443486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 29404214 - 29404162
Alignment:
Q  408 caagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||||||  ||||||| ||| |||| |||||||||||||||||||||||    
T  29404214 caagtgggtgtagcttgctaacttgcactt-agtgtttttaggtgggtgtaagt 29404162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 44021934 - 44021853
Alignment:
Q  377 aataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||||||||||| |||| || | ||||||  ||||||| ||| || ||| |  |||||||||| ||||    
T  44021934 aataatacttataaaaatgagtgtaaataattaaataggtgtagattgctaacttgcaccttaattattttaggtggatgta 44021853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 3678092 - 3678144
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||||||||||  || |||| |||||| ||||| |||||||||||||||||||    
T  3678092 aagtgggtgtagcttactaacttgtaccttagtatttttaggtgggtgtaagt 3678144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 10863091 - 10863055
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  10863091 tacacccacctaaaaacaccaaggtgtaagttagcaa 10863055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 358
Target Start/End: Complemental strand, 44021973 - 44021941
Alignment:
Q  326 tgaaatgatgaaagtgagtgtaaattagtgaag 358  Q
    |||||||||||||||| ||||||||||||||||    
T  44021973 tgaaatgatgaaagtgggtgtaaattagtgaag 44021941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 9e-59; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 9963952 - 9964106
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  9963952 gacaatgacatgcttaaggtacaaaacatgtaataaagacaaacttttaagcaaacaatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 9964051  T
Q  364 taacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgta 419  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  9964052 taacttgcaccttaataatattta-aaaaatgagtgtaaataatcaagtaggtgta 9964106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 267 - 428
Target Start/End: Original strand, 24790966 - 24791125
Alignment:
Q  267 aatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaa 366  Q
    ||||| || ||||| ||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24790966 aatgacatccttaaagtacaaaacatgtaataaagactgatttttaagaaaacaatatttgaaatgatgaaagtgagtgtcaattagtgaaaattgctaa 24791065  T
Q  367 cttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
     ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  24791066 tttgca-cttaataatacttat-aaaatgagtgtaaataatcaagtgggtgtaggttgctaa 24791125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 1507529 - 1507647
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  1507529 gacaatgacatgtttaaggtacaaaacatgtaataaagacaaacttttaacgaaacaatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 1507628  T
Q  364 taacttgcaccttaataat 382  Q
    |||||||||||||||||||    
T  1507629 taacttgcaccttaataat 1507647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 23102762 - 23102644
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  23102762 gacaataacatgcttaagatacaaaacatgtaataaagacaaacttttaaggaaacaatatttggaatgatgaaagtgggtgtaaattagtgaaggttgc 23102663  T
Q  364 taacttgcaccttaataat 382  Q
    |||||||||||||||||||    
T  23102662 taacttgcaccttaataat 23102644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 1507383 - 1507493
Alignment:
Q  117 cctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggca 216  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  1507383 cctaaaaacgctaaggtgcaagttagcaagctgcacccacttgtaatttactaaaa-cacccttttgtttatattctaattaattttaaatagaagggaa 1507481  T
Q  217 attttgtaacta 228  Q
    ||||||||||||    
T  1507482 attttgtaacta 1507493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 9963802 - 9963917
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaat 207  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9963802 ttacacccacctaaaaacactaaggtgcaagtcagcaagctgcacctacttataatttact-aaaacacccttttgtttatattctaattaattttaaat 9963900  T
Q  208 agaagggcaattttgtaacta 228  Q
        |||||||||||||||||    
T  9963901 ----gggcaattttgtaacta 9963917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 24790799 - 24790927
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||   |||| ||||||||||||| ||  |||||||||||||||||||||    
T  24790799 gctgttaacttacatccacctaaaaacactaaggtgtaagttagcaagctgcatccacttttaatttactaaaa-catccttttgtttatattctaatta 24790897  T
Q  199 attttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||| |||||||||||||    
T  24790898 attttaaatagaagggtaattttgtaacta 24790927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 2658299 - 2658430
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||||| |||  ||||||| |||||||||| |||  |||||||| |||||||||||    
T  2658299 gctgctaatttacacccac-taaaaacactaaggtgtaaattagcaagctacacccacttatattttactaaaa-caccattttgtttctattctaatta 2658396  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | ||||||||||||| ||||||||||||||||||    
T  2658397 aatttaaatagaaggacaattttgtaactatctt 2658430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 9158701 - 9158793
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  9158701 gacaatgacatgcttaaggtacaaatcatgtaatagagacaaacttttaaggaaacaatatttagaatgatgaaagtgggtgtaaattagtga 9158793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 1398310 - 1398217
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatg-aaagtgagtgtaaattagtga 356  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||  || |||||||||||||||||||||    
T  1398310 gacaatgatatgcttaaagtacaaaacatgcaatagagacaaacttttaaggaaacaatatttggaattgtgaaaagtgagtgtaaattagtga 1398217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 10982346 - 10982459
Alignment:
Q  114 ccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagg 213  Q
    |||||||||||||||||||||||||||| ||||||||||  |||  |  |||||| |||| || |||||| ||||||||||||||||||||||||||||     
T  10982346 ccacctaaaaacactaaggtgcaagttaacaagctgcacctactagttctttact-aaaatacccttttgattatattctaattaattttaaatagaaga 10982444  T
Q  214 gcaattttgtaacta 228  Q
    ||| ||| |||||||    
T  10982445 gcactttcgtaacta 10982459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 33473862 - 33473734
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattt 202  Q
    |||||||||| ||||||||||||||||||||| || |||||||| | |||  ||||||| |||||| |||||||  |||  ||| |||||||||||| ||    
T  33473862 ctaatttacatccacctaaaaacactaaggtgtaaattagcaagttacacccacttatattttact-aaaacaccttttcatttctattctaattaaatt 33473764  T
Q  203 taaatagaagggcaattttgtaactatctt 232  Q
    |||||||||| ||| |||| ||||||||||    
T  33473763 taaatagaagagcagttttataactatctt 33473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 47412942 - 47413058
Alignment:
Q  111 cacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaataga 210  Q
    ||||||||||||||||||||||||||||||| ||||||||||  |||  | ||||||  ||||||| ||||||| ||||||| ||||||||||||| |||    
T  47412942 cacccacctaaaaacactaaggtgcaagttaacaagctgcacctactagttatttac-caaaacacccttttgtctatattcaaattaattttaaaaaga 47413040  T
Q  211 agggcaattttgtaacta 228  Q
    |||| |  ||||||||||    
T  47413041 agggtagctttgtaacta 47413058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 2658463 - 2658554
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||| ||| |||||||| |||||||||||||  |||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2658463 gacaatgacatgtttaaggtataaaacatgtaatagtgacaaatttgtaaggaaacaatatttggaatgatgaaagtg-gtgtaaattagtga 2658554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 23102847 - 23102798
Alignment:
Q  179 ttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23102847 ttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 23102798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 7579432 - 7579559
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaa 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||| || |||| | |||||||   |||||   ||||| ||||||    
T  7579432 ctgctaatttacacccaccttaaaacactaaggtgcaagttagcaagctacactcacttgtattttagt-aaaacaccactttgtccctattcaaattaa 7579530  T
Q  200 ttttaaatagaagggcaattttgtaacta 228  Q
    ||| |||| |||||||| ||| |||||||    
T  7579531 tttaaaattgaagggcagtttagtaacta 7579559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 33473702 - 33473614
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    |||||||| |||||||||||||||||||||||| | ||||  ||||||||| ||  |||||||| ||||||||||||| ||||||||||    
T  33473702 gacaatgacatgcttaaggtacaaaacatgtaagagagacttacttttaagaaagtaatatttggaatgatgaaagtgggtgtaaatta 33473614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 43439322 - 43439453
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaa 199  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| ||   |||| || | |||| ||| ||   |||||| | ||||  |||| |    
T  43439322 ctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagctacatctacttgtattctact-aaatcatcattttgtctttattaaaattta 43439420  T
Q  200 ttttaaatagaagggcaattttgtaactatctt 232  Q
    |||||||||||||| || |||||||||||||||    
T  43439421 ttttaaatagaaggacagttttgtaactatctt 43439453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 9158539 - 9158669
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||||||||| ||||||||||| | ||||||| || |||| |||||  ||  ||||||| |||||| |||||||  |||| ||| |||||| |||||     
T  9158539 tgctaatttacatccacctaaaaatattaaggtgtaaattagaaagctatacccacttatattttact-aaaacaccattttctttctattctgattaaa 9158637  T
Q  201 tttaaatagaagggcaattttgtaactatctt 232  Q
    ||| ||||||| | ||||||||||||||||||    
T  9158638 ttttaatagaatgacaattttgtaactatctt 9158669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 23657913 - 23657866
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23657913 tgctaacttacacccacctaaaaacactaaggtgcaagttagcaagct 23657866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 1507710 - 1507661
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  1507710 gctgctaacttacacccatctaaaaacactaaggtgcaagttagcaagct 1507661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 11486703 - 11486658
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  11486703 ctaatttacatccacctaaaaacactaaggtgcaagttagcaagct 11486658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 38796775 - 38796729
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  38796775 gctgctaacttacacccacctaaaaacattaaggtgcaagttagcaa 38796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 23657263 - 23657308
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||    
T  23657263 tgctaacttacacccacctaaaaatactaaggtgcaagttagcaag 23657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 46916507 - 46916556
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  46916507 gctgctaacttacacccacctaaaaatactacggtgcaagttagcaagct 46916556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 47413560 - 47413519
Alignment:
Q  111 cacccacctaaaaacactaaggtgcaagttagcaagctgcac 152  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  47413560 cacccacctaaaaacactaaggtgcaagttaacaagctgcac 47413519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 9964191 - 9964145
Alignment:
Q  102 gctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  9964191 gctaacttacacctacctaaaaacactaaggtgcaagttagaaagct 9964145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 7571028 - 7571065
Alignment:
Q  315 gaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7571028 gaaacaatatttgaaatgatgaaagtgtgtgtaaatta 7571065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 7577443 - 7577480
Alignment:
Q  315 gaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7577443 gaaacaatatttgaaatgatgaaagtgtgtgtaaatta 7577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 7579805 - 7579842
Alignment:
Q  315 gaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7579805 gaaacaatatttgaaatgatgaaagtgtgtgtaaatta 7579842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 9158902 - 9158857
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||    
T  9158902 gctgctaatttacacc-acctaaaaacactaaggggtaagttagcaa 9158857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 23657383 - 23657309
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||| ||||||||||||| ||||||||||| |||| |||||||| ||| || ||| |  ||||||||||| ||||    
T  23657383 ttatcaaaatgagtgtaaataatcaagtggatgtaggttgctaacttgcaccttaataattttaggtgggcgtaa 23657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 7561614 - 7561658
Alignment:
Q  100 ctgctaatttacacccacctaaaaacactaaggtgcaagttagca 144  Q
    ||||||| |||||| |||| ||||| |||||||||||||||||||    
T  7561614 ctgctaacttacacacacccaaaaatactaaggtgcaagttagca 7561658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 10982699 - 10982659
Alignment:
Q  111 cacccacctaaaaacactaaggtgcaagttagcaagctgca 151  Q
    |||||| ||||||| |||||||||||||||| |||||||||    
T  10982699 cacccatctaaaaatactaaggtgcaagttaacaagctgca 10982659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 18095086 - 18095058
Alignment:
Q  104 taatttacacccacctaaaaacactaagg 132  Q
    |||||||||||||||||||||||||||||    
T  18095086 taatttacacccacctaaaaacactaagg 18095058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 23657856 - 23657908
Alignment:
Q  409 aagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    |||| ||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  23657856 aagttggtgtagcttgctaacttgcaccttagtgtttttaggtgggtgtaagt 23657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 33473496 - 33473424
Alignment:
Q  387 ataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    |||||||| ||||||  |||| ||||||||||| |||| ||| ||  |  |||||||||||||||||||||||    
T  33473496 ataaaaattagtgtatataatgaagtgggtgtaggttgttaacttacatgttagtgtttttaggtgggtgtaa 33473424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 8e-50; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 301 - 461
Target Start/End: Original strand, 15145402 - 15145562
Alignment:
Q  301 gacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgctaacttgcaccttaataatacttataaaaatgagtgt 400  Q
    ||||||||||||| |||| |||||||| |||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  15145402 gacaaacttttaatgaaataatatttgcaatgataaaagtgggtgtaaattagtgaaggttgctaacttgcaccttagtaatacttataaaaatgagtgt 15145501  T
Q  401 aagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    || | |||||||||||||| |||||||||||| || ||| | ||||||||||| |||||||    
T  15145502 aaatgatcaagtgggtgtaggttgctaatttgcaccttattatttttaggtggatgtaagt 15145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 388
Target Start/End: Original strand, 28867874 - 28867996
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtgaagattgc 363  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||||  ||||  |||||||||  ||||    
T  28867874 gacaatgacatgcttaaggtacaatacatgtaataaagacaaatttttaaggaaacattatttggaatgatgaaagttggtgt--attagtgaatgttgc 28867971  T
Q  364 taacttgcaccttaataatacttat 388  Q
    |||||||||||||||||||||||||    
T  28867972 taacttgcaccttaataatacttat 28867996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 28867731 - 28867836
Alignment:
Q  120 aaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaatt 219  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  28867731 aaaaacactaaggtgcaagttagcaagatgcactcacttataatttactaaaa-cacatttttgtttatattctaattaattttaaatagaagggcaatt 28867829  T
Q  220 ttgtaac 226  Q
    | |||||    
T  28867830 tcgtaac 28867836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 36896973 - 36896849
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    |||||||| ||||||| ||||||||||| |||  |||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||||||||||||    
T  36896973 gctgctaacttacacc-acctaaaaaca-taatttgcaagttagcaagctgctcccacttataatttactaaaa-cacccttttgtttatattctaatta 36896877  T
Q  199 attttaaatagaagggcaattttgtaac 226  Q
    |||| ||||||||| |||||||||||||    
T  36896876 atttaaaatagaagtgcaattttgtaac 36896849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 36896811 - 36896719
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  |||||||||||||    
T  36896811 gacaataacatgcttaagatacaaaacatgtaataaagacaaacttttaagaaaacaatatttagaatgatgaaagtggatgtaaattagtga 36896719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 9514599 - 9514671
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaacta 228  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9514599 acttataatttactaaaa-cacccttttgtttatattctaattaattttaaatagaaggacaattttgtaacta 9514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 9514707 - 9514780
Alignment:
Q  264 gacaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaa 337  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  9514707 gacaatgccatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttggaaagatgaa 9514780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 18933446 - 18933522
Alignment:
Q  276 cttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaatta 352  Q
    |||||| ||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  18933446 cttaagatacaaaacatgtaatatggacaaacttttaaagaaacaatatttaaaatgatgaaagtgagtgtaaatta 18933522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 459
Target Start/End: Original strand, 26637527 - 26637707
Alignment:
Q  277 ttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga--agattgctaacttgcacc 374  Q
    |||||||| ||||||||||||||   |||||||||||| |||||||||||||||||||||||||| ||||||||||||||   || ||  ||    ||      
T  26637527 ttaaggtaaaaaacatgtaataatagcaaacttttaagtaaacaatatttgaaatgatgaaagtgggtgtaaattagtgaggtgagtgtaaa----caat 26637622  T
Q  375 ttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaa 459  Q
    ||  ||| | |||||||||||||| ||| |||||||||||||||| ||| |||| ||| || ||||| ||||||| |||||||||    
T  26637623 ttgttaaaatttataaaaatgagtataaataatcaagtgggtgtaggttactaacttgcaccttagtatttttagttgggtgtaa 26637707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 32715459 - 32715584
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    |||||| || |||||||||||||||||||| |||||||| |||||||| |||  |||| || |||||| ||||||| | ||||| |   ||  |||||||    
T  32715459 tgctaacttgcacccacctaaaaacactaatgtgcaagtgagcaagctacacctacttgtattttact-aaaacac-cctttgtctcggttaaaattaat 32715556  T
Q  201 tttaaatagaagggcaattttgtaacta 228  Q
    | ||||||||||||||||||||||||||    
T  32715557 tctaaatagaagggcaattttgtaacta 32715584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 14148976 - 14148903
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| ||||||||||||||||    
T  14148976 ttataaaaatgagtgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgta 14148903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 14149204 - 14149128
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  14149204 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggcaatttcttaactatctt 14149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 39057981 - 39058046
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaa 338  Q
    |||||||||||| ||||||||||| | ||| |||||||||||||||||||||||  ||||||||||    
T  39057981 atgcttaaggtataaaacatgtaacagagaaaaacttttaaggaaacaatatttagaatgatgaaa 39058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 458
Target Start/End: Original strand, 18014332 - 18014528
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaat--gatgaaagtg---agtgtaaattagt--gaa 357  Q
    ||||||| ||||||||| || ||||||||||||| ||| ||||||||||||||| |||||||  |||  ||||||||||   |||||||||||||  ||     
T  18014332 acaatgacatgcttaagatataaaacatgtaatagagataaacttttaaggaaataatatttagaatgagatgaaagtgatcagtgtaaattagtaagat 18014431  T
Q  358 gattgctaacttgcaccttaataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgt 457  Q
    | |||  ||    ||  || |||| | |||||||||| | ||||  |||||||||||||||| |||||||| ||  || ||||| |||||||||||||||    
T  18014432 ggttgtaaa----caatttgataaaatttataaaaataaatgtatataatcaagtgggtgtaggttgctaacttacaccttagtatttttaggtgggtgt 18014527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 39057812 - 39057934
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaat 200  Q
    ||||||||||||||||| |||| ||||||||||| || |||        |||  ||||||| |||||||||| ||| |||||||||  ||| |||||||     
T  39057812 tgctaatttacacccacgtaaatacactaaggtgtaaatta--------cacacacttatattttactaaaa-cacccttttgtttcaattttaattaaa 39057902  T
Q  201 tttaaatagaagggcaattttgtaactatctt 232  Q
    |||||||||||||||| ||| |||||||||||    
T  39057903 tttaaatagaagggcagtttcgtaactatctt 39057934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 18014224 - 18014300
Alignment:
Q  155 acttataatttactaaaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    ||||||| |||||||||| |||  |||||||| |||||||||||| |||||||||||||| |||||  ||||||||||    
T  18014224 acttatattttactaaaa-cacctttttgtttctattctaattaaatttaaatagaagggtaatttcttaactatctt 18014300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 32716156 - 32716103
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcac 152  Q
    |||||||| || |||||| |||||||||||||| ||||||||||||||||||||    
T  32716156 gctgctaacttgcacccatctaaaaacactaagctgcaagttagcaagctgcac 32716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 33106087 - 33106042
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  33106087 ctaatttgcacccatctaaaaacactaaggtgcaagttagcaagct 33106042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 453
Target Start/End: Original strand, 39058094 - 39058162
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgg 453  Q
    |||||||||||||||||  |||||||||||||||| |||||||| ||  || ||||| |||||||||||    
T  39058094 ttataaaaatgagtgtatataatcaagtgggtgtaagttgctaacttacaccttagtatttttaggtgg 39058162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 350
Target Start/End: Original strand, 4927553 - 4927588
Alignment:
Q  315 gaaacaatatttgaaatgatgaaagtgagtgtaaat 350  Q
    ||||||||||||||||||||||||||||||||||||    
T  4927553 gaaacaatatttgaaatgatgaaagtgagtgtaaat 4927588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 26637440 - 26637494
Alignment:
Q  170 aaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgta 224  Q
    ||||||||||||||||| ||| |||||||||||| ||||| |||||| |||||||    
T  26637440 aaaacactcttttgtttctatactaattaatttttaatagtagggcagttttgta 26637494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 10142155 - 10142204
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    |||||||||||||||||| ||||||| ||||||||| || ||||||||||    
T  10142155 gctgctaatttacacccatctaaaaatactaaggtgtaaattagcaagct 10142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 14149094 - 14149038
Alignment:
Q  268 atgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatt 325  Q
    |||| ||||||||| || ||||||||| ||| ||||||||||||||||||||||||||    
T  14149094 atgacatgcttaag-tataaaacatgtgatagagacaaacttttaaggaaacaatatt 14149038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 9737880 - 9737912
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaag 131  Q
    |||||||||||||||||||||||||||||||||    
T  9737880 gctgctaatttacacccacctaaaaacactaag 9737912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 39058215 - 39058164
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgca 151  Q
    |||| |||||||||||||||||||| |||||||||| || |||||||||||||    
T  39058215 gctgttaatttacacccacctaaaa-cactaaggtgtaaattagcaagctgca 39058164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 5999303 - 5999252
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcac 152  Q
    ||||||||||||||||| |||||| ||||||||| || ||| ||||||||||    
T  5999303 tgctaatttacacccacttaaaaatactaaggtgaaaattaacaagctgcac 5999252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 455
Target Start/End: Complemental strand, 9738226 - 9738160
Alignment:
Q  389 aaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggt 455  Q
    ||||||||||||   ||||||||||||||||||||||||| ||| || ||  | |||||||||||||    
T  9738226 aaaaatgagtgtctataatcaagtgggtgtatgttgctaacttgcacctttatttttttaggtgggt 9738160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 12383615 - 12383537
Alignment:
Q  380 aatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||||||||||||| | || ||| |||||||||||||||| ||||| || ||| || ||| |  |||||||||||||||    
T  12383615 aatacttataaaaacgtgtctaaataatcaagtgggtgtaggttgccaacttgcaccttaatagttttaggtgggtgta 12383537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 6114683 - 6114631
Alignment:
Q  302 acaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagt 354  Q
    ||||||||||||| |||| ||||||||||| || ||||||  |||||||||||    
T  6114683 acaaacttttaagtaaactatatttgaaataataaaagtgtatgtaaattagt 6114631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 10142284 - 10142204
Alignment:
Q  378 ataatacttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgta 458  Q
    |||| |||||||||||  ||||||| ||||||||| |||||| |||||||| ||  || ||| || ||||| |||||||||    
T  10142284 ataaaacttataaaaaatagtgtaaataatcaagtaggtgtaggttgctaacttacaccttaatgattttaagtgggtgta 10142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 14148903 - 14148939
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  14148903 tacacccacctaaaaatactaaggtgtaagttagcaa 14148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 18014528 - 18014492
Alignment:
Q  109 tacacccacctaaaaacactaaggtgcaagttagcaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  18014528 tacacccacctaaaaatactaaggtgtaagttagcaa 18014492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 452814 - 452905
Alignment:
Q  265 acaatgatatgcttaaggtacaaaacatgtaataaagacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || || |||||||||||    
T  452814 acaatgacatgtttaaggtacaaaacatgtaatagagacaaacttttaaggaaacaatatttggaatgatgaaaatgggtttaaattagtga 452905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 452649 - 452781
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaatta 198  Q
    ||||| ||||||||  |||||||||||||||||||| ||  ||| ||||| |||  ||||||| |||||||||| |||  |||||||| |||| ||||||    
T  452649 gctgcaaatttacattcacctaaaaacactaaggtgtaaaatagtaagctacacccacttatattttactaaaa-cacctttttgtttctattttaatta 452747  T
Q  199 attttaaatagaagggcaattttgtaactatctt 232  Q
    | |||||||||||||||| |||||||||||||||    
T  452748 aatttaaatagaagggcagttttgtaactatctt 452781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0538 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0538
Description:

Target: scaffold0538; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 3981 - 4036
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3981 agacacacttttaaggaaacaatatttgaaatgat-aaagtgagtgtaaattagtga 4036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0538; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 428
Target Start/End: Original strand, 8446 - 8571
Alignment:
Q  300 agacaaacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga--agattgctaacttgcaccttaataatacttataaaaatgag 397  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||   || ||  ||    ||  || |||| ||||||||| |||||    
T  8446 agacacacttttaaggaaacgatatttgaaatgat-aaagtgagtgtaaattagtgaggtgagtgtaaa----caatttgataaaacttataaacatgag 8540  T
Q  398 tgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    ||||| |||||||||||||||| ||||||||    
T  8541 tgtaaataatcaagtgggtgtaagttgctaa 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0538; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 3610 - 3655
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaag 146  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||    
T  3610 tgctaatttacacccaccccaaaacaccaaggtgcaaattagcaag 3655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 3666 - 3562
Alignment:
Q  103 ctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaaacactcttttgtttatattctaattaattt 202  Q
    |||| ||||| ||||||||||||| |||||| |||||| ||||||  |||  | ||||| || ||||||| | | |||||||||||||||||||||||||    
T  3666 ctaacttacatccacctaaaaacattaaggtacaagtttgcaagcgacacccatttatatttgactaaaa-ctcccttttgtttatattctaattaattt 3568  T
Q  203 taaata 208  Q
    ||||||    
T  3567 taaata 3562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 3197 - 3237
Alignment:
Q  108 ttacacccacctaaaaacactaaggtgcaagttagcaagct 148  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  3197 ttacacccacctaaaaaaactaatgtgcaagttagcaagct 3237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 3310 - 3267
Alignment:
Q  385 ttataaaaatgagtgtaagtaatcaagtgggtgtatgttgctaa 428  Q
    |||||||||||||||||| ||||||||||||| || ||||||||    
T  3310 ttataaaaatgagtgtaaataatcaagtgggtataggttgctaa 3267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 3420 - 3337
Alignment:
Q  273 atgcttaaggtacaaaacatgtaataaagaca--aacttttaaggaaacaatatttgaaatgatgaaagtgagtgtaaattagtga 356  Q
    |||||||||||| |||||||  ||||| ||||  |||||||||||||| ||| |||| ||  ||||||||| ||||||||||||||    
T  3420 atgcttaaggtaaaaaacat--aataaggacacaaacttttaaggaaaaaatctttggaagcatgaaagtgggtgtaaattagtga 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 41666 - 41615
Alignment:
Q  101 tgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcac 152  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  41666 tgctaacttacacctacctaaaaacactaaggtgcaagttagcaagttgcac 41615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 40722 - 40776
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacg 153  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  40722 gctgctaacttacacctacctaaaaacactaaggtacaagttagcaagctacacg 40776  T

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Target: scaffold0096; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 41605 - 41661
Alignment:
Q  405 aatcaagtgggtgtatgttgctaatttgtactttagtgtttttaggtgggtgtaagt 461  Q
    ||||||||||||| |  ||||||| ||| || ||||||||||||||| |||||||||    
T  41605 aatcaagtgggtgcaacttgctaacttgcaccttagtgtttttaggtaggtgtaagt 41661  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 23129 - 23067
Alignment:
Q  170 aaaacactcttttgtttatattctaattaattttaaatagaagggcaattttgtaactatctt 232  Q
    |||||| |||||||||| |||||||||||| ||||||||| | | || |||| ||||||||||    
T  23129 aaaacattcttttgtttctattctaattaaatttaaataggatgacagttttataactatctt 23067  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 7374 - 7301
Alignment:
Q  99 gctgctaatttacacccacctaaaaacactaaggtgcaagttagcaagctgcacggacttataatttactaaaa 172  Q
    |||||||  ||||| ||||||||||||||||||||  ||||||||||||  |||  |||| || ||||||||||    
T  7374 gctgctatattacatccacctaaaaacactaaggtataagttagcaagccacacccacttgtattttactaaaa 7301  T

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