View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11668_low_2 (Length: 858)

Name: NF11668_low_2
Description: NF11668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11668_low_2
NF11668_low_2
[»] chr6 (29 HSPs)
chr6 (18-466)||(23130351-23130807)
chr6 (719-844)||(23130805-23130935)
chr6 (751-810)||(10031563-10031622)
chr6 (741-811)||(19369809-19369879)
chr6 (734-810)||(17168887-17168963)
chr6 (91-170)||(16766725-16766804)
chr6 (684-781)||(785395-785492)
chr6 (752-808)||(5579649-5579705)
chr6 (72-164)||(18367870-18367962)
chr6 (72-170)||(10339058-10339157)
chr6 (72-170)||(17327594-17327686)
chr6 (721-811)||(5970085-5970175)
chr6 (752-798)||(6751890-6751936)
chr6 (734-811)||(10760832-10760908)
chr6 (756-812)||(1334652-1334708)
chr6 (188-251)||(8365563-8365626)
chr6 (140-171)||(9750450-9750481)
chr6 (752-806)||(4859121-4859175)
chr6 (139-173)||(8101110-8101144)
chr6 (741-811)||(9024173-9024243)
chr6 (82-168)||(9107313-9107399)
chr6 (91-173)||(21223718-21223800)
chr6 (72-170)||(31384948-31385045)
chr6 (100-161)||(11352398-11352459)
chr6 (188-253)||(12696275-12696339)
chr6 (111-164)||(16488562-16488615)
chr6 (752-809)||(20809637-20809694)
chr6 (72-133)||(34595188-34595249)
chr6 (757-810)||(34868170-34868223)
[»] scaffold0036 (1 HSPs)
scaffold0036 (72-169)||(9680-9777)
[»] chr7 (32 HSPs)
chr7 (734-811)||(1885565-1885642)
chr7 (744-812)||(5937421-5937489)
chr7 (81-168)||(25822685-25822772)
chr7 (734-797)||(44172880-44172943)
chr7 (741-803)||(35238181-35238243)
chr7 (76-169)||(6630849-6630942)
chr7 (741-811)||(9050130-9050200)
chr7 (82-170)||(24339670-24339758)
chr7 (741-811)||(31808506-31808575)
chr7 (752-810)||(44317294-44317352)
chr7 (741-783)||(48964059-48964101)
chr7 (124-173)||(3520327-3520376)
chr7 (759-811)||(1934943-1934995)
chr7 (735-783)||(30013215-30013263)
chr7 (67-111)||(38134334-38134378)
chr7 (759-803)||(38134421-38134465)
chr7 (711-810)||(19206043-19206142)
chr7 (72-123)||(21568565-21568616)
chr7 (752-811)||(22801749-22801808)
chr7 (752-783)||(25956465-25956496)
chr7 (113-168)||(26329356-26329411)
chr7 (67-133)||(598262-598328)
chr7 (140-170)||(5548704-5548734)
chr7 (734-804)||(7438705-7438775)
chr7 (140-170)||(18013075-18013105)
chr7 (752-797)||(36013806-36013852)
chr7 (72-106)||(38804493-38804527)
chr7 (67-133)||(43027403-43027469)
chr7 (136-173)||(2845011-2845048)
chr7 (72-133)||(9778559-9778620)
chr7 (81-170)||(32308148-32308237)
chr7 (68-121)||(40287302-40287355)
[»] chr4 (23 HSPs)
chr4 (684-811)||(37496696-37496823)
chr4 (91-166)||(30982830-30982905)
chr4 (745-803)||(44362666-44362724)
chr4 (744-797)||(13307883-13307936)
chr4 (72-170)||(24613634-24613732)
chr4 (72-170)||(27706110-27706208)
chr4 (759-812)||(5654606-5654659)
chr4 (756-809)||(10634984-10635037)
chr4 (68-117)||(34594204-34594253)
chr4 (108-169)||(44132613-44132674)
chr4 (752-784)||(10164862-10164894)
chr4 (759-803)||(18513256-18513300)
chr4 (736-784)||(28084541-28084589)
chr4 (139-173)||(8402742-8402776)
chr4 (91-173)||(9825566-9825648)
chr4 (757-811)||(15969345-15969399)
chr4 (741-811)||(16303263-16303333)
chr4 (108-170)||(22234859-22234921)
chr4 (741-783)||(22799890-22799932)
chr4 (757-811)||(43093538-43093592)
chr4 (759-812)||(10546139-10546192)
chr4 (752-811)||(20633477-20633533)
chr4 (710-811)||(47263978-47264079)
[»] chr5 (35 HSPs)
chr5 (685-806)||(30080442-30080563)
chr5 (100-170)||(18592101-18592171)
chr5 (68-163)||(36642692-36642786)
chr5 (761-811)||(38866445-38866496)
chr5 (761-811)||(38749580-38749630)
chr5 (752-812)||(19167584-19167645)
chr5 (72-168)||(3966533-3966629)
chr5 (743-811)||(28296320-28296388)
chr5 (759-810)||(11596470-11596521)
chr5 (752-803)||(21319953-21320004)
chr5 (753-799)||(15294935-15294981)
chr5 (752-810)||(38784799-38784857)
chr5 (72-170)||(39698569-39698667)
chr5 (741-810)||(13287396-13287465)
chr5 (759-811)||(2039864-2039916)
chr5 (759-803)||(4344742-4344786)
chr5 (108-164)||(6401532-6401588)
chr5 (759-811)||(26205775-26205827)
chr5 (81-133)||(42893414-42893466)
chr5 (91-170)||(21542058-21542137)
chr5 (188-251)||(22013366-22013429)
chr5 (752-811)||(24906309-24906368)
chr5 (752-811)||(31084315-31084374)
chr5 (108-169)||(35904674-35904732)
chr5 (761-812)||(39342445-39342496)
chr5 (771-821)||(309140-309190)
chr5 (745-779)||(16207592-16207626)
chr5 (69-159)||(30183588-30183678)
chr5 (754-811)||(7621245-7621302)
chr5 (752-812)||(15302516-15302574)
chr5 (759-812)||(16881127-16881180)
chr5 (72-133)||(21191000-21191061)
chr5 (67-132)||(21576684-21576749)
chr5 (111-164)||(21814295-21814348)
chr5 (761-810)||(23287366-23287415)
[»] chr3 (28 HSPs)
chr3 (72-173)||(17005552-17005653)
chr3 (73-133)||(16192667-16192727)
chr3 (761-811)||(41319327-41319377)
chr3 (743-809)||(49179714-49179780)
chr3 (72-133)||(11252030-11252091)
chr3 (72-170)||(10690196-10690293)
chr3 (92-168)||(11665974-11666050)
chr3 (757-813)||(34409355-34409411)
chr3 (75-170)||(28812543-28812638)
chr3 (756-798)||(14338495-14338537)
chr3 (67-133)||(27505305-27505371)
chr3 (741-802)||(11093571-11093632)
chr3 (72-173)||(14216917-14217018)
chr3 (72-173)||(14223046-14223147)
chr3 (72-125)||(27277784-27277836)
chr3 (72-172)||(8039768-8039868)
chr3 (102-170)||(14209141-14209209)
chr3 (752-804)||(21861568-21861620)
chr3 (140-172)||(26917296-26917328)
chr3 (759-802)||(12704672-12704715)
chr3 (761-802)||(7948959-7949001)
chr3 (72-118)||(11610578-11610624)
chr3 (91-173)||(15796246-15796328)
chr3 (91-173)||(18446672-18446754)
chr3 (739-789)||(26656714-26656764)
chr3 (81-170)||(4987233-4987322)
chr3 (751-784)||(13005445-13005478)
chr3 (718-811)||(21478675-21478768)
[»] chr2 (34 HSPs)
chr2 (72-170)||(11223797-11223894)
chr2 (67-173)||(35056893-35056999)
chr2 (72-170)||(44860348-44860446)
chr2 (81-170)||(28524454-28524543)
chr2 (752-811)||(43586013-43586072)
chr2 (72-170)||(17776615-17776713)
chr2 (72-170)||(36756277-36756375)
chr2 (188-251)||(6940207-6940270)
chr2 (752-811)||(13501086-13501145)
chr2 (72-170)||(27286225-27286323)
chr2 (72-170)||(34784915-34785013)
chr2 (752-810)||(44984658-44984716)
chr2 (72-173)||(22084760-22084866)
chr2 (734-783)||(24067273-24067322)
chr2 (746-811)||(42665600-42665665)
chr2 (752-804)||(10535767-10535819)
chr2 (759-811)||(30298462-30298514)
chr2 (735-803)||(40681982-40682050)
chr2 (735-783)||(14450784-14450834)
chr2 (759-802)||(18570973-18571016)
chr2 (123-170)||(18889575-18889622)
chr2 (741-780)||(21371795-21371834)
chr2 (72-171)||(24975259-24975357)
chr2 (767-806)||(25317134-25317173)
chr2 (752-811)||(37558969-37559028)
chr2 (67-117)||(12748737-12748787)
chr2 (72-138)||(38117103-38117169)
chr2 (752-810)||(40909607-40909665)
chr2 (141-170)||(22550254-22550283)
chr2 (759-808)||(31026690-31026739)
chr2 (141-170)||(31808105-31808134)
chr2 (140-173)||(34691806-34691839)
chr2 (140-173)||(34714218-34714251)
chr2 (113-170)||(38355861-38355918)
[»] chr1 (23 HSPs)
chr1 (72-170)||(9828072-9828170)
chr1 (734-808)||(24462260-24462334)
chr1 (72-170)||(47989525-47989623)
chr1 (76-170)||(16164252-16164346)
chr1 (737-811)||(40176595-40176669)
chr1 (734-803)||(28170382-28170450)
chr1 (72-132)||(18190052-18190112)
chr1 (752-811)||(24176811-24176871)
chr1 (752-811)||(38078669-38078728)
chr1 (752-811)||(40686766-40686825)
chr1 (72-170)||(5944311-5944409)
chr1 (72-170)||(6427492-6427590)
chr1 (744-810)||(7988451-7988517)
chr1 (113-170)||(34371741-34371798)
chr1 (123-170)||(25361914-25361961)
chr1 (140-170)||(7918212-7918242)
chr1 (67-133)||(18337383-18337449)
chr1 (741-783)||(26390130-26390172)
chr1 (91-133)||(31015091-31015133)
chr1 (72-170)||(31694643-31694741)
chr1 (757-806)||(14332406-14332454)
chr1 (741-798)||(42386394-42386450)
chr1 (140-173)||(52903274-52903307)
[»] scaffold0136 (2 HSPs)
scaffold0136 (81-170)||(3791-3880)
scaffold0136 (721-784)||(3826-3889)
[»] chr8 (21 HSPs)
chr8 (752-811)||(42874514-42874573)
chr8 (72-170)||(26902108-26902206)
chr8 (684-802)||(27733848-27733966)
chr8 (752-811)||(26915248-26915307)
chr8 (741-811)||(5307053-5307122)
chr8 (72-170)||(11927019-11927117)
chr8 (72-170)||(29447472-29447570)
chr8 (752-804)||(34073986-34074038)
chr8 (67-170)||(15816057-15816160)
chr8 (732-795)||(25566849-25566912)
chr8 (123-170)||(28384978-28385025)
chr8 (72-170)||(8343344-8343442)
chr8 (734-811)||(22651968-22652045)
chr8 (752-805)||(31548301-31548354)
chr8 (752-783)||(31119107-31119138)
chr8 (752-809)||(10002171-10002229)
chr8 (734-812)||(10497806-10497884)
chr8 (72-170)||(11944693-11944791)
chr8 (757-803)||(14480138-14480184)
chr8 (68-133)||(5813646-5813711)
chr8 (81-170)||(22197684-22197773)
[»] scaffold0123 (1 HSPs)
scaffold0123 (72-170)||(44458-44556)
[»] scaffold0024 (2 HSPs)
scaffold0024 (741-811)||(18105-18175)
scaffold0024 (91-173)||(126740-126822)
[»] scaffold0019 (1 HSPs)
scaffold0019 (72-168)||(71755-71851)
[»] scaffold0003 (3 HSPs)
scaffold0003 (72-170)||(241622-241720)
scaffold0003 (72-118)||(236918-236964)
scaffold0003 (734-811)||(241586-241663)
[»] scaffold0008 (1 HSPs)
scaffold0008 (81-170)||(263314-263403)
[»] scaffold0512 (1 HSPs)
scaffold0512 (67-133)||(4975-5041)
[»] scaffold0314 (1 HSPs)
scaffold0314 (752-798)||(8953-8999)
[»] scaffold0039 (1 HSPs)
scaffold0039 (91-173)||(84925-85007)
[»] scaffold0026 (1 HSPs)
scaffold0026 (91-173)||(56395-56477)
[»] scaffold0022 (1 HSPs)
scaffold0022 (741-811)||(99885-99955)


Alignment Details
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 18 - 466
Target Start/End: Original strand, 23130351 - 23130807
Alignment:
Q  18 aatatggttgcatttagctcaccaagcgattcactttagaatacaaaccgctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacac 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  23130351 aatatggttgcatttagctcatcaagcgattcactttagaatacaaaccactgcgaagcacatacactcctcagattaggcatgtcccgatatcagacac 23130450  T
Q  118 gtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatgnnnnnnnnn---ccttcaa-ttattagctatgtcggcatgtcag 213  Q
    |||| ||||||||||| |||||||||||||||||||  |||| |||||||||||||            ||||||| ||||||||||||||||||||||||    
T  23130451 gtgtcgtgtctgacaccaacatgacactgacacata--attaaactgaattatatgttttttgtttttccttcaaattattagctatgtcggcatgtcag 23130548  T
Q  214 tgtcagtgttgtgtctgatgcccgt------atccgtgtttcattaatacaaagtaaataatctcaaactatagcctaagacgtgtcactttagtgttaa 307  Q
    |||||||||||||||||||| ||||      |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23130549 tgtcagtgttgtgtctgatgtccgtgtctgtatccgtgtttcattgatacaaagtaaataatctcaaactatagcctaagacatgtcactttagtgttaa 23130648  T
Q  308 gagtttgttcctattatatcaagagacggagtccaaatttccggtatcatttgtaagagtttgatcctataatattaggagagtgagtccaaatcctccg 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  23130649 gagtttgttcctattatatcaagagacggagtccaaatttccggtatcatttgtaagagtttgatcctgtaatattaggagagggagtccaaatcctccg 23130748  T
Q  408 gttattggttgtaaaatagttattagtgtcgctgtaatacgtgagataatgtcaatata 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23130749 gttattggttgtaaaatagttattagtgtcgctgtaatacgtgagataatgtcaatata 23130807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 719 - 844
Target Start/End: Original strand, 23130805 - 23130935
Alignment:
Q  719 atatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattg-----aattatgtcatttttccaaaatattatcggtgtcgacgtgtctt 813  Q
    |||||||| |||||||||| | ||||||||||||||||| |||||||||||     ||||||||||||||   ||||||||| ||| |||||||||||||    
T  23130805 atatgtgttatatcggacatcgacacgacacaaacacttatgattacattgaattgaattatgtcattttcttaaaatattaccggcgtcgacgtgtctt 23130904  T
Q  814 taattgtcatgttccggtgtcggtgtctgtg 844  Q
    ||||||||||||| |||||||||||||||||    
T  23130905 taattgtcatgtttcggtgtcggtgtctgtg 23130935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 751 - 810
Target Start/End: Complemental strand, 10031622 - 10031563
Alignment:
Q  751 aacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  10031622 aacacttgtgattacattgaattatgtcattttctcaaaattttatcggtgtcaacgtgt 10031563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 741 - 811
Target Start/End: Complemental strand, 19369879 - 19369809
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||  ||||||||||||||||||||||||||||||||  |||||| ||||| ||||| |||||||    
T  19369879 acacgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatccgtgtcaacgtgtc 19369809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 734 - 810
Target Start/End: Complemental strand, 17168963 - 17168887
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||| ||||||||||||| | |  ||||||||||||||||||||||| |||| |||||||  |||||||||||    
T  17168963 gacaccaatacgacacaaacacatatagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 17168887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 16766804 - 16766725
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| ||||||| |||| ||||||||||||||| |||||  ||| ||||| ||||| | |||||||||||||||||    
T  16766804 gattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 16766725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 781
Target Start/End: Original strand, 785395 - 785492
Alignment:
Q  684 ggacacttctgattgaagacgtgttttggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatt 781  Q
    ||||||||||||||||||  ||||  |||||||||| |    |||| |  |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  785395 ggacacttctgattgaaggtgtgtcctggtgtccgacacacatcatgttcgacaccgacacgacaccgacacttgtgattacattgaattatgtcatt 785492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 5579705 - 5579649
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgt 808  Q
    |||||||||| ||||||||| |||||||||||  |||||| ||||||||||||||||    
T  5579705 acacttgtgactacattgaactatgtcattttctcaaaattttatcggtgtcgacgt 5579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 18367962 - 18367870
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactg 164  Q
    |||||||  ||||||||  ||| |||| ||||||  ||||||||| |||| |||||||||||  ||| ||||| |||||||||||||||||||    
T  18367962 gaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactg 18367870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 10339058 - 10339157
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataatt-acactgaattat 170  Q
    |||||||  ||||||||| |||||||| ||||||  |||| |||| |||| ||||| |||||  ||| | ||||||||||||||||| ||||||||||||    
T  10339058 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattat 10339157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 17327594 - 17327686
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||||| ||||||  |||||||||||||| ||||| |||||      |||||||||||||||| ||||||| ||||||    
T  17327594 gaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac------gacactgacacatatagttacactaaattat 17327686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 811
Target Start/End: Original strand, 5970085 - 5970175
Alignment:
Q  721 atgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||| | || |||||| |||||||||  ||| |||| |||||| |||||||||| |||||| |||| ||||| | |||||||||||||    
T  5970085 atgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtc 5970175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 798
Target Start/End: Original strand, 6751890 - 6751936
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcg 798  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||||    
T  6751890 acacttgtgattacattgaattatgtcattttctcaaaattttatcg 6751936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 811
Target Start/End: Original strand, 10760832 - 10760908
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||||||   |||| |||||||||||| ||| ||||||||||  |||| ||||||| |||||||||||||    
T  10760832 gacaccaacacgacatcgacacgtgtgattacattcaat-atgtcattttctcaaattattatcagtgtcgacgtgtc 10760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 756 - 812
Target Start/End: Complemental strand, 1334708 - 1334652
Alignment:
Q  756 ttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| ||||| | ||||||    
T  1334708 ttgtgattacattgaattatgtccttttttcaaaattttatccgtgtcaatgtgtct 1334652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 8365563 - 8365626
Alignment:
Q  188 aattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgcccgtatccgtgtttcat 251  Q
    ||||||||| | ||||||| |||||||||| |||| ||||||| || ||||||||||| |||||    
T  8365563 aattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcat 8365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 171
Target Start/End: Original strand, 9750450 - 9750481
Alignment:
Q  140 gacactgacacatataattacactgaattata 171  Q
    ||||||||||||||||||||||||||||||||    
T  9750450 gacactgacacatataattacactgaattata 9750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 806
Target Start/End: Original strand, 4859121 - 4859175
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgac 806  Q
    |||| ||||||||||||| |||||||||||||  |||| |||||| |||||||||    
T  4859121 acacgtgtgattacattggattatgtcattttctcaaattattattggtgtcgac 4859175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 8101144 - 8101110
Alignment:
Q  139 tgacactgacacatataattacactgaattatatg 173  Q
    |||||||||||||||||||||||||| ||||||||    
T  8101144 tgacactgacacatataattacactggattatatg 8101110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 9024173 - 9024243
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||  |||| | |||||||||||||||||||||||||  |||| ||| ||  |||||||||||||    
T  9024173 acacgacactgacacatatgattacattgaattatgtcattttctcaaattatcatttgtgtcgacgtgtc 9024243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 9107313 - 9107399
Alignment:
Q  82 cactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    |||||||| |||||||  ||||||| |||| |||||  |||||||| |||||  ||| ||||| ||||| | |||||||||||||||    
T  9107313 cactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 9107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 21223718 - 21223800
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| || |||| |||| |||||| |||||||  |||||  ||| |||||||||| ||||||||||||  |||||||||    
T  21223718 gattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacacgacactgacatatataattacacataattatatg 21223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 31385045 - 31384948
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||  |||||||| ||||||| |||  ||||||||| |||||  |||| | || ||||||||||| | |||||||||||||||||    
T  31385045 gaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacacta-cacgacactgacacttgtaattacactgaattat 31384948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11352459 - 11352398
Alignment:
Q  100 tgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattaca 161  Q
    ||||| |||||| |||||||||||||||||| ||  ||| |||| ||| |||||||||||||    
T  11352459 tgtcctgatgtcggacacgtgttgtgtctgataccgacacgacattgatacatataattaca 11352398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 12696339 - 12696275
Alignment:
Q  188 aattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgcccgtatccgtgtttcatta 253  Q
    ||||||||||| ||||||| |||||||||| |||| ||||| | || ||||||||||| |||||||    
T  12696339 aattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg-tgtccgtatccgtgcttcatta 12696275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 16488562 - 16488615
Alignment:
Q  111 cagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactg 164  Q
    ||||||||||| ||||| |||||  ||| ||||| |||||||||||||||||||    
T  16488562 cagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactg 16488615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 809
Target Start/End: Complemental strand, 20809694 - 20809637
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtg 809  Q
    |||||||||||||| ||  ||||||| | |||| |||||| |||||||||||||||||    
T  20809694 acacttgtgattaccttagattatgttaatttttcaaaattttatcggtgtcgacgtg 20809637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 34595249 - 34595188
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||  ||||||||| |||||||  ||||||| |||||||||||||| ||||| |||||    
T  34595249 gaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 34595188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 810
Target Start/End: Original strand, 34868170 - 34868223
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    ||||||||||||||||||||  ||| |  |||||| ||||||||||||||||||    
T  34868170 tgtgattacattgaattatgatattctctcaaaattttatcggtgtcgacgtgt 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 9680 - 9777
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatta 169  Q
    |||||||  ||||||||| |||||  | ||||||||||||||||| |||| ||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  9680 gaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 734 - 811
Target Start/End: Complemental strand, 1885642 - 1885565
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |||||    
T  1885642 gacaccaacacgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtc 1885565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 744 - 812
Target Start/End: Original strand, 5937421 - 5937489
Alignment:
Q  744 cgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||    
T  5937421 cgacacagacacttgtgattacattgaattatgtcattttctcaaaattttatccgtgttgacgtgtct 5937489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 25822772 - 25822685
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||| || ||  | | ||||| ||||| | |||||||||||||||    
T  25822772 acactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 734 - 797
Target Start/End: Original strand, 44172880 - 44172943
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatc 797  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||    
T  44172880 gacaccaacacaacacaaacacatgtgattacattgaattatgtcattttctcaaattattatc 44172943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 741 - 803
Target Start/End: Original strand, 35238181 - 35238243
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||  ||||||||||||||||||    
T  35238181 acacgacactaacacgtgtgattatattgaattatgtcattttctcaaaatattatcggtgtc 35238243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 6630849 - 6630942
Alignment:
Q  76 cacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatta 169  Q
    |||| |||||||||||||||||  ||||  | |||| | ||||||||||||| ||||| |||| ||||  ||||||||||||||||||||||||    
T  6630849 cacacacactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaatta 6630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 9050130 - 9050200
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||| |||| |||||||| |||||| |||||||||||| |||||| |||||  ||||||||||||    
T  9050130 acacgacacagacacatgtgattatattgaactatgtcattttttcaaaattttatctatgtcgacgtgtc 9050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 24339758 - 24339670
Alignment:
Q  82 cactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| |||||||| ||||||| |||| || |||||| ||||| |||||  ||| ||||| ||||| | |||||||||||||||||    
T  24339758 cactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 24339670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 31808506 - 31808575
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||| ||||| |||||||||||||| || |||||||||  |||| ||||||||||| |||||||||    
T  31808506 acacgacaccaacacatgtgattacattgacttgtgtcattttctcaaattattatcggtg-cgacgtgtc 31808575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 810
Target Start/End: Original strand, 44317294 - 44317352
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||| ||||||||||||||||||||||||||  ||||| ||||| ||||| ||||||    
T  44317294 acacttatgattacattgaattatgtcatttttttaaaattttatcagtgtcaacgtgt 44317352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 783
Target Start/End: Original strand, 48964059 - 48964101
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  48964059 acacgacaccaacacttgtgattaaattgaattatgtcatttt 48964101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 3520327 - 3520376
Alignment:
Q  124 tgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  3520327 tgtctgacaccaacatgtcaccgacacatataattacattgaattatatg 3520376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 811
Target Start/End: Complemental strand, 1934995 - 1934943
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||| |||||||||| |||| |||| ||||||||||||||| |||||    
T  1934995 tgattacattcaattatgtcaattttacaaattattatcggtgtcgatgtgtc 1934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 735 - 783
Target Start/End: Complemental strand, 30013263 - 30013215
Alignment:
Q  735 acaccaacacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    ||||||||| ||||||||||| |||||||| ||||||||| ||||||||    
T  30013263 acaccaacatgacacaaacacatgtgattatattgaattacgtcatttt 30013215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 38134334 - 38134378
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtc 111  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||    
T  38134334 gctatgaagcacatacactcctcggattaggcgtgtcccgatgtc 38134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 803
Target Start/End: Original strand, 38134421 - 38134465
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    |||||||||||||||||||||||||  |||| |||||||||||||    
T  38134421 tgattacattgaattatgtcattttctcaaattattatcggtgtc 38134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 810
Target Start/End: Complemental strand, 19206142 - 19206043
Alignment:
Q  711 ggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||| |||||||||||| || |||||||||| |||||  |||| | | |||| | |||||||||| |||||  |||| ||||| |||||||| |||||    
T  19206142 ggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19206043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 21568565 - 21568616
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttg 123  Q
    |||||||| ||||||||||||||| |||||||||| |||| |||||| ||||    
T  21568565 gaagcacagacactcctcagattaagcatgtcccggtgtccgacacgcgttg 21568616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 22801749 - 22801808
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||| |||||||||||||| |  |||||| | |||||||| ||||||||    
T  22801749 acacttgtgattacagtgaattatgtcattatctcaaaatttgatcggtgttgacgtgtc 22801808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 783
Target Start/End: Complemental strand, 25956496 - 25956465
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttt 783  Q
    ||||||||||||||||||||||||||||||||    
T  25956496 acacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 26329356 - 26329411
Alignment:
Q  113 gacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    ||||||||| |||||||||||  ||| ||| | |||||||||||||||||||||||    
T  26329356 gacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaatt 26329411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 598328 - 598262
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||| |||||||  ||||| ||| |||||||| ||||||| |||| ||||||||| |||||||||||    
T  598328 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 170
Target Start/End: Complemental strand, 5548734 - 5548704
Alignment:
Q  140 gacactgacacatataattacactgaattat 170  Q
    |||||||||||||||||||||||||||||||    
T  5548734 gacactgacacatataattacactgaattat 5548704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 804
Target Start/End: Complemental strand, 7438775 - 7438705
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcg 804  Q
    |||||| ||| |||||  |||||||| ||||||||||||||||| |||||| |||| ||||| | ||||||    
T  7438775 gacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 170
Target Start/End: Original strand, 18013075 - 18013105
Alignment:
Q  140 gacactgacacatataattacactgaattat 170  Q
    |||||||||||||||||||||||||||||||    
T  18013075 gacactgacacatataattacactgaattat 18013105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 797
Target Start/End: Original strand, 36013806 - 36013852
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttc-caaaatattatc 797  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||    
T  36013806 acacgtgtgattacattgaattatgtcatttttctcaaattattatc 36013852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 38804493 - 38804527
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccg 106  Q
    |||||||||||||||||| ||||||||||||||||    
T  38804493 gaagcacatacactcctcggattaggcatgtcccg 38804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 43027403 - 43027469
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||| |||||||  |||||| || |||||||| ||||||| |||| ||||||||| |||||||||||    
T  43027403 gctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 2845048 - 2845011
Alignment:
Q  136 acatgacactgacacatataattacactgaattatatg 173  Q
    |||||||||||||||||||||||||||| || ||||||    
T  2845048 acatgacactgacacatataattacactaaactatatg 2845011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 9778620 - 9778559
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||  ||||||||  |||||||| ||||||| |||| ||||||||||||||| |||||    
T  9778620 gaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 32308237 - 32308148
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||| ||||||   |||| || |||| |||| |||| |||||  ||||  ||| |||||||||||||| ||||||||||||||||    
T  32308237 acactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattat 32308148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 40287302 - 40287355
Alignment:
Q  68 ctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgt 121  Q
    |||||||||||  ||||||||| |||||||||||||||| |||| |||| ||||    
T  40287302 ctacgaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgt 40287355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 811
Target Start/End: Complemental strand, 37496823 - 37496696
Alignment:
Q  684 ggacacttctgattgaagacgtgttttggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    |||||||| ||||||||| |||||   ||||||||| ||||||| | || | || | |||| ||||  ||||||||||||||||||||||||||||||||    
T  37496823 ggacacttatgattgaaggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcatttt 37496724  T
Q  784 tccaaaatattatcggtgtcgacgtgtc 811  Q
      ||||| |||||||||||| |||||||    
T  37496723 ctcaaaaaattatcggtgtcaacgtgtc 37496696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 30982830 - 30982905
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaa 166  Q
    |||||||| ||||||| |||| ||||||||| |||||||||||  ||| ||||| ||||| |||||||||||||||    
T  30982830 gattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaa 30982905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 745 - 803
Target Start/End: Complemental strand, 44362724 - 44362666
Alignment:
Q  745 gacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||| |||||||||||    
T  44362724 gacaccaacacttgtgattacattaaattatgtcattttctcaaaattttatcggtgtc 44362666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 744 - 797
Target Start/End: Complemental strand, 13307936 - 13307883
Alignment:
Q  744 cgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatc 797  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||| |||||    
T  13307936 cgacaccaacacttgtgattacattgaattatgtcattttctcaaaattttatc 13307883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 24613634 - 24613732
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||  |||||| | ||||| | |||||||||||||| |||||||||||  ||||||||| ||||| | || ||||| ||||||||    
T  24613634 gaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattat 24613732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 27706110 - 27706208
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||| |||| |||||||||||||| ||||||| | || || |||||| ||||| ||||  |||| |||||| |||| | |||||||||| ||||||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattat 27706208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 759 - 812
Target Start/End: Original strand, 5654606 - 5654659
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||||||||||||||||||||||  |||| ||||||| |||||||| |||||    
T  5654606 tgattacattgaattatgtcattttctcaaattattatcagtgtcgacatgtct 5654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 756 - 809
Target Start/End: Complemental strand, 10635037 - 10634984
Alignment:
Q  756 ttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtg 809  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| || ||||||||    
T  10635037 ttgtgataacattgaattatgtcattttttcaaaattttatcagtatcgacgtg 10634984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 34594204 - 34594253
Alignment:
Q  68 ctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacac 117  Q
    |||||||||||||||||| |||| ||||||||||||||  ||||||||||    
T  34594204 ctacgaagcacatacacttctcatattaggcatgtccctgtgtcagacac 34594253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 44132613 - 44132674
Alignment:
Q  108 tgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatta 169  Q
    |||||||||| ||||||||  ||||| |||| ||||| |||||||||||||| |||||||||    
T  44132613 tgtcagacacatgttgtgttcgacaccaacacgacaccgacacatataattatactgaatta 44132674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 752 - 784
Target Start/End: Original strand, 10164862 - 10164894
Alignment:
Q  752 acacttgtgattacattgaattatgtcattttt 784  Q
    |||||||||||||||||||||||||||||||||    
T  10164862 acacttgtgattacattgaattatgtcattttt 10164894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 803
Target Start/End: Original strand, 18513256 - 18513300
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    |||||||||||||||||||||||||  |||| |||||||||||||    
T  18513256 tgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 736 - 784
Target Start/End: Complemental strand, 28084589 - 28084541
Alignment:
Q  736 caccaacacgacacaaacacttgtgattacattgaattatgtcattttt 784  Q
    |||| |||||||||| |||||||| ||||||||||||||||| ||||||    
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgattttt 28084541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 8402742 - 8402776
Alignment:
Q  139 tgacactgacacatataattacactgaattatatg 173  Q
    ||||||||| |||||||||||||||||||||||||    
T  8402742 tgacactgagacatataattacactgaattatatg 8402776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 9825648 - 9825566
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| || |||| ||||||||||| |||||||  || ||  ||| |||||||||| ||||||||||||  |||||||||    
T  9825648 gattaggcgtgacccgttgtcagacacgcgttgtgttcgaaaccgacacgacactgacatatataattacacataattatatg 9825566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 811
Target Start/End: Complemental strand, 15969399 - 15969345
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||| |||||||| ||||||  ||| ||||||| |||||||||||||    
T  15969399 tgtgattacattaaattatgttattttttaaaattattatcagtgtcgacgtgtc 15969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 16303263 - 16303333
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||  |||||||| |||||| | |||||| |||||||| ||||||||||||  ||||| ||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtc 16303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 22234859 - 22234921
Alignment:
Q  108 tgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||| ||||||||| ||||| |||||  ||| ||||| |||||||| ||||||||||||||||    
T  22234859 tgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattat 22234921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 783
Target Start/End: Original strand, 22799890 - 22799932
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    |||||||||  |||| |||||||||||||||||||||||||||    
T  22799890 acacgacactgacacgtgtgattacattgaattatgtcatttt 22799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 811
Target Start/End: Original strand, 43093538 - 43093592
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||    
T  43093538 tgtgattacattcaattatgccattttttcaaattattatgggtgttgacgtgtc 43093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 812
Target Start/End: Complemental strand, 10546192 - 10546139
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||||||||||||||||||||||  |||| |||||||  ||||||| |||||    
T  10546192 tgattacattgaattatgtcattttctcaaattattatcattgtcgacatgtct 10546139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 20633533 - 20633477
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||   ||||| |||| ||||| |||||||||||||||    
T  20633533 acacttgtaattacattgaattatg---ttttttcaaattattagcggtgtcgacgtgtc 20633477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 811
Target Start/End: Complemental strand, 47264079 - 47263978
Alignment:
Q  710 tggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtg 809  Q
    ||||||| || ||||||| |||| |||||||||| ||||   ||| |||| ||||||  ||||||||| |||||| |||| ||||| |  ||||||||||    
T  47264079 tggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcgacgtg 47263980  T
Q  810 tc 811  Q
    ||    
T  47263979 tc 47263978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 4e-19; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 685 - 806
Target Start/End: Original strand, 30080442 - 30080563
Alignment:
Q  685 gacacttctgattgaagacgtgttttggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcattttt 784  Q
    ||||||||| |||||||  ||||   ||||||||| ||||||||| || ||||| ||||| ||||  | ||||||||||||||||||||||||||||||     
T  30080442 gacacttctaattgaaggagtgtcccggtgtccgacatgtgtcatgtccgacactaacaccacaccgatacttgtgattacattgaattatgtcattttc 30080541  T
Q  785 ccaaaatattatcggtgtcgac 806  Q
     |||||| ||||| ||||||||    
T  30080542 tcaaaattttatcagtgtcgac 30080563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 18592171 - 18592101
Alignment:
Q  100 tgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||||||||||||||||||||||| |||||  ||| ||||| | |||||||||||||| ||||||||    
T  18592171 tgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 36642692 - 36642786
Alignment:
Q  68 ctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacact 163  Q
    |||||||||||  |||||||||  ||||||| ||||||| |||| ||||||||| ||||| ||||| |||||||||| ||||| |||| |||||||    
T  36642692 ctacgaagcaccgacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacact 36642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 761 - 811
Target Start/End: Complemental strand, 38866496 - 38866445
Alignment:
Q  761 attacattgaattatgtcatttttc-caaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  38866496 attacattgaattatgtcatttttttcaaaatattatcggtgtcgacgtgtc 38866445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 761 - 811
Target Start/End: Original strand, 38749580 - 38749630
Alignment:
Q  761 attacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  38749580 attacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 752 - 812
Target Start/End: Original strand, 19167584 - 19167645
Alignment:
Q  752 acacttgtgattacattgaattatgtca-tttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||||||||||||||||||| ||||| ||||| |||||| ||||||||||| ||||||||    
T  19167584 acacttgtgattacattgaattgtgtcatttttttcaaaattttatcggtgtcaacgtgtct 19167645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 3966629 - 3966533
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    |||||||  ||||||||| |||||| | ||||||  |||  ||||| ||||||||| |||||  ||| ||||| |||||||||||||||||||||||    
T  3966629 gaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 743 - 811
Target Start/End: Complemental strand, 28296388 - 28296320
Alignment:
Q  743 acgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||| ||||| | ||| |||||||||||||||||||||  |||| |||||||||||||||| ||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcgacttgtc 28296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 810
Target Start/End: Original strand, 11596470 - 11596521
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||||||    
T  11596470 tgattacattgaattatgtcattttctcaaattattatcggtatcgacgtgt 11596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 803
Target Start/End: Original strand, 21319953 - 21320004
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||| |||||    
T  21319953 acacttgtgattacattgaattatatcattttttcaaaattttatccgtgtc 21320004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 799
Target Start/End: Complemental strand, 15294981 - 15294935
Alignment:
Q  753 cacttgtgattacattgaattatgtcatttttccaaaatattatcgg 799  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||    
T  15294981 cacttgtgattaccttgaattatgtcattttttcaaaatatcatcgg 15294935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 810
Target Start/End: Complemental strand, 38784857 - 38784799
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||||| ||| ||||    
T  38784857 acacttgtgattacattgaattatatcattttttcacaattttatcggtgccgatgtgt 38784799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 39698667 - 39698569
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||||| |||| || |||| || || ||| ||||| |||||  ||| ||||||||||| | |||||||||||||||||    
T  39698667 gaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattat 39698569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 810
Target Start/End: Original strand, 13287396 - 13287465
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||||  ||||||||  ||||| |||||||||| |||||| |||| ||||||| ||||||||||||    
T  13287396 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgt 13287465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 811
Target Start/End: Original strand, 2039864 - 2039916
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||||| ||||||||||  |||| ||||| |||||||||||||||    
T  2039864 tgattacattgaatcatgtcattttctcaaattattaccggtgtcgacgtgtc 2039916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 803
Target Start/End: Complemental strand, 4344786 - 4344742
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||    
T  4344786 tgattacactgaattatgtcattttttcaaattattatcggtgtc 4344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 6401588 - 6401532
Alignment:
Q  108 tgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactg 164  Q
    |||||||||||||| ||||| |||||  ||| ||||| |||||||||||||||||||    
T  6401588 tgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactg 6401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 811
Target Start/End: Original strand, 26205775 - 26205827
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||  |||||| |||||||| ||||||||||    
T  26205775 tgattacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtc 26205827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 42893466 - 42893414
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||||| ||||||| ||||| | |||| |||||||||||||||||||||    
T  42893466 acactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacac 42893414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 21542137 - 21542058
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||| ||| ||||||| |||| ||||||||| ||||| |||||  ||| ||||| ||||| | |||||||||||||||||    
T  21542137 gattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 21542058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 22013429 - 22013366
Alignment:
Q  188 aattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgcccgtatccgtgtttcat 251  Q
    ||||||||||| ||||||| |||||||||| |||| ||||| | || ||||||||||| |||||    
T  22013429 aattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 22013366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 24906309 - 24906368
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| |||||| ||||||||||||||||| |||| ||||||| |||| | ||||||    
T  24906309 acacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtc 24906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 31084374 - 31084315
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||| |||||| |||| ||||| | |||||| ||||||    
T  31084374 acacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 35904732 - 35904674
Alignment:
Q  108 tgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatta 169  Q
    |||| |||| |||||||||||||||| |||||||    ||||||||||||||||||||||||    
T  35904732 tgtcggacatgtgttgtgtctgacaccaacatgaa---gacacatataattacactgaatta 35904674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 812
Target Start/End: Complemental strand, 39342496 - 39342445
Alignment:
Q  761 attacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    ||||||||||||||||||| |||| |||| ||||||||| || |||||||||    
T  39342496 attacattgaattatgtcaatttttcaaattattatcggagttgacgtgtct 39342445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 771 - 821
Target Start/End: Complemental strand, 309190 - 309140
Alignment:
Q  771 attatgtcatttttccaaaatattatcggtgtcgacgtgtctttaattgtc 821  Q
    |||||||||||||  |||||| |||||||||||||||||||| | ||||||    
T  309190 attatgtcattttctcaaaattttatcggtgtcgacgtgtctgtcattgtc 309140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 745 - 779
Target Start/End: Original strand, 16207592 - 16207626
Alignment:
Q  745 gacacaaacacttgtgattacattgaattatgtca 779  Q
    ||||| |||||||||||||||||||||||||||||    
T  16207592 gacaccaacacttgtgattacattgaattatgtca 16207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 30183678 - 30183588
Alignment:
Q  69 tacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataatta 159  Q
    ||||||||||| ||||| |||  ||||||| ||||||  |||| ||||||||| |||||||| || |||| ||||| ||||| | ||||||    
T  30183678 tacgaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaatta 30183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 754 - 811
Target Start/End: Original strand, 7621245 - 7621302
Alignment:
Q  754 acttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||| |||||||||| ||||   |||| ||||| |||||||||||||    
T  7621245 acttgtgattacattaaattatgtcaatttttttaaattttatctgtgtcgacgtgtc 7621302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 812
Target Start/End: Complemental strand, 15302574 - 15302516
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||||||||||| ||||||  |||||||||| |||||| |||||| |||||| ||||||    
T  15302574 acacttgtgattaccttgaat--tgtcattttttcaaaattttatcgttgtcgatgtgtct 15302516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 812
Target Start/End: Complemental strand, 16881180 - 16881127
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||||||| ||||||||||||||| |||| |||||| ||| | |||||||||    
T  16881180 tgattacattaaattatgtcattttttcaaattattatgggtattgacgtgtct 16881127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 21191000 - 21191061
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||  ||||||||| |||||||| |||||||  ||| ||||||||||||||| |||||    
T  21191000 gaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacac 21191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 21576684 - 21576749
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgaca 132  Q
    |||| |||||||  ||||||||| |||||||| ||||||  |||||||||||||| ||||| ||||    
T  21576684 gctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgaca 21576749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 21814348 - 21814295
Alignment:
Q  111 cagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactg 164  Q
    ||||||||||| ||||| |||||  ||| ||||| |||||||||||||||||||    
T  21814348 cagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactg 21814295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 761 - 810
Target Start/End: Original strand, 23287366 - 23287415
Alignment:
Q  761 attacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||| |||||||||||||||||| | ||| |||||| |||||||||||||    
T  23287366 attatattgaattatgtcattttcctaaattattattggtgtcgacgtgt 23287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 4e-19; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 17005552 - 17005653
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattata 171  Q
    |||||||| ||||||||| ||||||   ||||| | ||||||||||||||| |||||||||| ||||  |||| ||||| ||||||||||||||||||||    
T  17005552 gaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattata 17005651  T
Q  172 tg 173  Q
    ||    
T  17005652 tg 17005653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 16192667 - 16192727
Alignment:
Q  73 aagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||||||||    
T  16192667 aagcacaaacactcctcatattaggtatgtcccggtgtcagacacgtgtcgtgtctgacac 16192727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 761 - 811
Target Start/End: Original strand, 41319327 - 41319377
Alignment:
Q  761 attacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  41319327 attacattgaattatgtcattttttcaaattattattggtgtcgacgtgtc 41319377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 743 - 809
Target Start/End: Original strand, 49179714 - 49179780
Alignment:
Q  743 acgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtg 809  Q
    |||||||  |||||||||||||||| ||||||||||| |||  |||||| |||||||||||||||||    
T  49179714 acgacaccgacacttgtgattacatcgaattatgtcactttctcaaaattttatcggtgtcgacgtg 49179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 11252091 - 11252030
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||    
T  11252091 gaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacac 11252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 10690196 - 10690293
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac-aaacatgacactgacacatataattacactgaattat 170  Q
    |||||||||||| ||||| |||||||  |||| |  |||||||||||||||||||| ||||| |||||  | || |||| ||||||||||||||||||||    
T  10690196 gaagcacatacattcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacactaaaca--ataccgacaaatataattacactgaattat 10690293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 11666050 - 11665974
Alignment:
Q  92 attaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    ||||||| ||| ||||| |||||||||||| |||||| |||  |||| ||||| |||||||||||||||||| ||||    
T  11666050 attaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaatt 11665974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 813
Target Start/End: Original strand, 34409355 - 34409411
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtctt 813  Q
    |||||||||||||||||||||||||||  | || |||||||||||| ||||||||||    
T  34409355 tgtgattacattgaattatgtcattttctcgaagtattatcggtgttgacgtgtctt 34409411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 28812638 - 28812543
Alignment:
Q  75 gcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||| ||||||||| |||||||| ||||| | |||| |||| || | ||||||||||| |||| ||||| ||||| | ||| |||||||||||||    
T  28812638 gcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattat 28812543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 756 - 798
Target Start/End: Original strand, 14338495 - 14338537
Alignment:
Q  756 ttgtgattacattgaattatgtcatttttccaaaatattatcg 798  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  14338495 ttgtgattacattgaattatgtcattttttcaaaattttatcg 14338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 27505371 - 27505305
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||| |||||||  ||||||||| |||||||||||||||| |||| ||||||||| ||||| |||||    
T  27505371 gctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 802
Target Start/End: Complemental strand, 11093632 - 11093571
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgt 802  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||| |||| ||||||| ||||    
T  11093632 acacgacaccaacacatctgattactttgaattatgtcattttttcaaattattatcagtgt 11093571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 14217018 - 14216917
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattata 171  Q
    |||||||  ||||| ||| |||||||  ||||||  ||||  |||||||| ||||| ||||| |||| ||||| ||||| | ||||||||||||||||||    
T  14217018 gaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattata 14216919  T
Q  172 tg 173  Q
    ||    
T  14216918 tg 14216917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 14223147 - 14223046
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattata 171  Q
    |||||||  ||||| ||| |||||||  ||||||  ||||  |||||||| ||||| ||||| |||| ||||| ||||| | ||||||||||||||||||    
T  14223147 gaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattata 14223048  T
Q  172 tg 173  Q
    ||    
T  14223047 tg 14223046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 27277784 - 27277836
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtg 125  Q
    |||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  27277784 gaagcacatacactcctcggattagacatgtcccg-tgtcggacacgtgttgtg 27277836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 8039768 - 8039868
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattata 171  Q
    |||||||| | |||| || ||||| || ||||||| |||| |||| || |  |||| |||||  ||| ||||| ||||||||||||||||||||||||||    
T  8039768 gaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattata 8039867  T
Q  172 t 172  Q
    |    
T  8039868 t 8039868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 14209209 - 14209141
Alignment:
Q  102 tcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||||  |||||||| ||||| |||||  ||| ||||||||||| | |||||||||||||||||    
T  14209209 tcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattat 14209141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 752 - 804
Target Start/End: Complemental strand, 21861620 - 21861568
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcg 804  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||| ||||||    
T  21861620 acacttatgattacactgaattatgtcatttttccaaattgttatctgtgtcg 21861568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 26917328 - 26917296
Alignment:
Q  140 gacactgacacatataattacactgaattatat 172  Q
    |||||||||||||||||||||||||||||||||    
T  26917328 gacactgacacatataattacactgaattatat 26917296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 802
Target Start/End: Original strand, 12704672 - 12704715
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgt 802  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||    
T  12704672 tgattacattgaattatgtcattttttcaaattattatccgtgt 12704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 802
Target Start/End: Complemental strand, 7949001 - 7948959
Alignment:
Q  761 attacattgaattatgtcatttttc-caaaatattatcggtgt 802  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  7949001 attacattgaattatgtcatttttctcaaactattatcggtgt 7948959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 11610624 - 11610578
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacg 118  Q
    |||||||  |||||||||||||||||| |||||||||||| ||||||    
T  11610624 gaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 15796246 - 15796328
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| ||| ||| |||  ||||||||||||||| |||||  ||| ||||| ||||  | ||||||||||||||||||||    
T  15796246 gattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatg 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 18446672 - 18446754
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| || |||| ||||||||||| |||||||  || ||  ||| |||||||||| ||||||||||||  |||||||||    
T  18446672 gattaggcgtgacccgttgtcagacacgcgttgtgttcgaaaccgacacgacactgacatatataattacacataattatatg 18446754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 739 - 789
Target Start/End: Original strand, 26656714 - 26656764
Alignment:
Q  739 caacacgacacaaacacttgtgattacattgaattatgtcatttttccaaa 789  Q
    |||||| |||||||||| |||| |||||||||||||| | |||||||||||    
T  26656714 caacacaacacaaacacatgtggttacattgaattattttatttttccaaa 26656764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 4987233 - 4987322
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||| |||||||| ||||||| |||| ||||||||| |||||  ||||  ||| | |||  |||| | |||||||||||||||||    
T  4987233 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattat 4987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 751 - 784
Target Start/End: Complemental strand, 13005478 - 13005445
Alignment:
Q  751 aacacttgtgattacattgaattatgtcattttt 784  Q
    |||||||||||||| |||||||||||||||||||    
T  13005478 aacacttgtgattatattgaattatgtcattttt 13005445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 811
Target Start/End: Complemental strand, 21478768 - 21478675
Alignment:
Q  718 gatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||| |||| || |||||||| || |||| ||||| | |||||||||||| ||||||||| ||   ||| |||||| ||||||||| ||||    
T  21478768 gatatgtttcatgtctgacaccaaaacaacaccaacacatatgattacattgatttatgtcatcttgtgaaattattattggtgtcgacatgtc 21478675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 11223797 - 11223894
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||||||||||||||| ||||||| ||||||||| |||| ||||| |||||  ||||||||| ||||| | |||||||||||||||||    
T  11223797 gaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattat 11223894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 35056999 - 35056893
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaa 166  Q
    |||| |||||||  |||||||||||||||||| |||  |  |||| ||||||||| ||||| |||||  ||| ||||| |||||||||||||||||||||    
T  35056999 gctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaa 35056900  T
Q  167 ttatatg 173  Q
    |||||||    
T  35056899 ttatatg 35056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 44860446 - 44860348
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||||||  ||||||  |||||||||||| ||||| ||| |||||  |||| |||| ||||| |||||||||||||||||||||||||    
T  44860446 gaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattat 44860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 28524543 - 28524454
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||| |||||||||||| |||  |  |||||||||||||||||||| ||||| ||||  |||  |||||||||||||||||||||||||    
T  28524543 acacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattat 28524454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 43586013 - 43586072
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||||    
T  43586013 acacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtc 43586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 17776713 - 17776615
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||||| |||||||| ||| |||||  || |||||  ||||  || ||||||||||||||||||||||||||| ||||    
T  17776713 gaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 36756277 - 36756375
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| ||||||||  |||||||| |||  || |||| |||| |||||||||  ||||| |||| ||||| ||||| |||||||||||||||||||    
T  36756277 gaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattat 36756375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 6940270 - 6940207
Alignment:
Q  188 aattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgcccgtatccgtgtttcat 251  Q
    ||||||||||| ||||||| |||||||||| |||| || | ||||| |||||||||||||||||    
T  6940270 aattattagctgtgtcggcgtgtcagtgtccgtgtcgtatttgatgtccgtatccgtgtttcat 6940207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 13501086 - 13501145
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||||||||||||||||||   ||||| ||||||| ||||| |||||    
T  13501086 acacttgtgattacattgaattatgtcattttcttaaaattttatcggcgtcgatgtgtc 13501145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 27286225 - 27286323
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| |||||| | |||||||  |||||||| |||| |||| |||| ||||| ||||   |||||||| |||||| |||||||||||| ||||||    
T  27286225 gaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattat 27286323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 34784915 - 34785013
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| |||||||||  || |||| ||||||  ||||||||| |||| ||||| || ||  ||| ||||| |||||||||||||||||| ||||||    
T  34784915 gaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattat 34785013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 810
Target Start/End: Original strand, 44984658 - 44984716
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    ||||||||||| |||||||||||| |||||||| |||||| | || |||||||||||||    
T  44984658 acacttgtgatcacattgaattatatcattttttcaaaatttgataggtgtcgacgtgt 44984716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 22084760 - 22084866
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatg---tcagacacgtgttgtgtctgacacaaacatgacactgacacatat--aattacactgaa 166  Q
    |||||||| |||||| || |||||||| ||||||| ||   |||||||||||||||||| |||||  ||| || || | |||||||  ||||||||||||    
T  22084760 gaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaa 22084859  T
Q  167 ttatatg 173  Q
    |||||||    
T  22084860 ttatatg 22084866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 783
Target Start/End: Complemental strand, 24067322 - 24067273
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    |||||| ||| || || |||||||||||||||||||||||||||||||||    
T  24067322 gacaccgacatgaaaccaacacttgtgattacattgaattatgtcatttt 24067273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 746 - 811
Target Start/End: Complemental strand, 42665665 - 42665600
Alignment:
Q  746 acacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||| ||||| |||||||||||||||| ||||||| ||| |||||| |||||| | ||||||||||    
T  42665665 acaccaacacatgtgattacattgaatcatgtcatcttttcaaaattttatcgatatcgacgtgtc 42665600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 752 - 804
Target Start/End: Original strand, 10535767 - 10535819
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcg 804  Q
    |||||| |||||||| ||||||||||||||||  |||| ||||||||||||||    
T  10535767 acacttatgattacactgaattatgtcattttctcaaattattatcggtgtcg 10535819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 811
Target Start/End: Original strand, 30298462 - 30298514
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||   ||| |||||||||||||||||||||    
T  30298462 tgattacactgaattatgtcattttattaaattattatcggtgtcgacgtgtc 30298514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 735 - 803
Target Start/End: Complemental strand, 40682050 - 40681982
Alignment:
Q  735 acaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    ||||||||||||||   |||| ||  |||||||||||||||||||||||  |||| |||||||||||||    
T  40682050 acaccaacacgacattgacacgtgcaattacattgaattatgtcattttctcaaattattatcggtgtc 40681982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 783
Target Start/End: Original strand, 14450784 - 14450834
Alignment:
Q  735 acaccaacacgacacaa--acacttgtgattacattgaattatgtcatttt 783  Q
    ||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  14450784 acaccaacacgacacactgacacttgtgattacattgaattatgtgatttt 14450834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 802
Target Start/End: Complemental strand, 18571016 - 18570973
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgt 802  Q
    |||||||||||||||||||||||||  |||| ||||||||||||    
T  18571016 tgattacattgaattatgtcattttctcaaattattatcggtgt 18570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 18889575 - 18889622
Alignment:
Q  123 gtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  18889575 gtgtccgacacaaacaagacaccgacacatatgattacactgaattat 18889622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 780
Target Start/End: Complemental strand, 21371834 - 21371795
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcat 780  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  21371834 acacgacacaaacacatgtgattacatttaattatgtcat 21371795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 24975259 - 24975357
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattata 171  Q
    |||||||  ||||||||||||||||   ||||||  |||| ||||| ||| |||||||||||  ||| ||||| ||| |||||| |||||||||||||||    
T  24975259 gaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaattata 24975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 767 - 806
Target Start/End: Complemental strand, 25317173 - 25317134
Alignment:
Q  767 ttgaattatgtcatttttccaaaatattatcggtgtcgac 806  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  25317173 ttgaattatgtcattttttcaaattattatcggtgtcgac 25317134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 37559028 - 37558969
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||| |||||| |||| ||||| | |||||| ||||||    
T  37559028 acacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtc 37558969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 12748787 - 12748737
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacac 117  Q
    |||| |||||||| |||||||||| ||||||||||||||| |||| |||||    
T  12748787 gctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgacac 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 38117103 - 38117169
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaaca 138  Q
    |||||||  |||| |||| |||||||| ||||||| |||| ||||||||||||||| ||||| ||||    
T  38117103 gaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaaca 38117169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 810
Target Start/End: Complemental strand, 40909665 - 40909607
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||||| || |||||||||||| |||||||| |||||| | || |||||||||||||    
T  40909665 acacttgtaatcacattgaattatatcattttttcaaaatttgataggtgtcgacgtgt 40909607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 22550254 - 22550283
Alignment:
Q  141 acactgacacatataattacactgaattat 170  Q
    ||||||||||||||||||||||||||||||    
T  22550254 acactgacacatataattacactgaattat 22550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 31026739 - 31026690
Alignment:
Q  759 tgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgt 808  Q
    |||||||||||||||||||||||||   ||| |||||||||| |||||||    
T  31026739 tgattacattgaattatgtcattttcttaaattattatcggtctcgacgt 31026690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 31808134 - 31808105
Alignment:
Q  141 acactgacacatataattacactgaattat 170  Q
    ||||||||||||||||||||||||||||||    
T  31808134 acactgacacatataattacactgaattat 31808105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 34691806 - 34691839
Alignment:
Q  140 gacactgacacatataattacactgaattatatg 173  Q
    ||||| ||||||||||||||||||||||||||||    
T  34691806 gacaccgacacatataattacactgaattatatg 34691839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 34714218 - 34714251
Alignment:
Q  140 gacactgacacatataattacactgaattatatg 173  Q
    ||||| ||||||||||||||||||||||||||||    
T  34714218 gacaccgacacatataattacactgaattatatg 34714251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 38355861 - 38355918
Alignment:
Q  113 gacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||||||| ||  |||| || ||||||| |||||||||||| ||||||||||||    
T  38355861 gacacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaattat 38355918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 9828170 - 9828072
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||| | ||||||| |||| ||||||||| |||||||||||  ||| ||||| |||||||| ||||||||||||||||    
T  9828170 gaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattat 9828072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 734 - 808
Target Start/End: Original strand, 24462260 - 24462334
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgt 808  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||    
T  24462260 gacaccaacacgacactgaaacttgtgattacattgaattatgtcattttttcaaaatttgatcagtgtcgacgt 24462334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 47989623 - 47989525
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||||| ||||||||||||||||| |||| ||||| |||||  ||| ||||| ||||| | |||||||||||||||||    
T  47989623 gaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 47989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 16164252 - 16164346
Alignment:
Q  76 cacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||||| || |||||||| ||||| | |||| ||||||||||| |||  |||| |||| |||| ||||||||||||||||| | ||||||    
T  16164252 cacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattat 16164346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 737 - 811
Target Start/End: Complemental strand, 40176669 - 40176595
Alignment:
Q  737 accaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||||||  |||| |||||||||||||||| | ||||||||  |||||| |||||||||| ||||||||    
T  40176669 accaacacgacactgacacatgtgattacattgaatgaagtcattttctcaaaattttatcggtgttgacgtgtc 40176595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 28170450 - 28170382
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    |||||||||| |||||  |||||||| |||||||||||||||||||||||| |||||| |||| ||||||    
T  28170450 gacaccaacatgacactgacacttgttattacattgaattatgtcattttt-caaaattttattggtgtc 28170382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 18190052 - 18190112
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgaca 132  Q
    ||||| |||||||||||| |||||||  ||||||| |||| ||||||||||||||||||||    
T  18190052 gaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgaca 18190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 24176871 - 24176811
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttc-caaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||||    
T  24176871 acacttgtgattacattaaatcatgtcatttttctcaaaattttatcggtgttgacgtgtc 24176811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 38078669 - 38078728
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||| ||||||||||||||||| |||||| |||| ||||| | |||||||||||||    
T  38078669 acacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtc 38078728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 40686766 - 40686825
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||| ||||||||||||||||| |||||||  |||||| |||||| ||||||||||||    
T  40686766 acacttatgattacattgaattatatcattttatcaaaattttatcgatgtcgacgtgtc 40686825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 5944409 - 5944311
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||||| | ||||| |||| |||| |||||||||| | ||   ||| ||||| ||||| |||||||||||||||||||    
T  5944409 gaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattat 5944311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 6427590 - 6427492
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||| ||||||||||| ||||||| |||| ||||||||| ||||| ||| |  ||| ||||||||||| | || ||||| ||||||||    
T  6427590 gaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattat 6427492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 810
Target Start/End: Original strand, 7988451 - 7988517
Alignment:
Q  744 cgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgt 810  Q
    |||||| ||||||| ||||||||||||||||||||| |||   ||| ||||||| ||||||||||||    
T  7988451 cgacaccaacacttatgattacattgaattatgtcactttcttaaattattatcagtgtcgacgtgt 7988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 34371798 - 34371741
Alignment:
Q  113 gacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||| || || ||||| |||| ||||| |||||||||||||||||||||||||    
T  34371798 gacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattat 34371741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 25361961 - 25361914
Alignment:
Q  123 gtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattat 25361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 170
Target Start/End: Original strand, 7918212 - 7918242
Alignment:
Q  140 gacactgacacatataattacactgaattat 170  Q
    |||||||||||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattat 7918242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 18337449 - 18337383
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||| |||||||  ||||||||| ||| |||||||||||  |||| ||||||||||||||| |||||    
T  18337449 gctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacac 18337383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 783
Target Start/End: Original strand, 26390130 - 26390172
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    |||||||||  ||||||||||||||||| ||||||||||||||    
T  26390130 acacgacactgacacttgtgattacattcaattatgtcatttt 26390172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 31015133 - 31015091
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||| |||||||||||||||||||||| ||||| |||||    
T  31015133 gattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac 31015091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 31694643 - 31694741
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||||||||||||||| ||| ||| ||||  | | |||||||||| |||||  ||| ||||| ||||| | |||||| ||||||||||    
T  31694643 gaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattat 31694741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 806
Target Start/End: Complemental strand, 14332454 - 14332406
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgac 806  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||||||||    
T  14332454 tgtgattacattgaattatgtca-ttttctcaaattttatcggtgtcgac 14332406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 798
Target Start/End: Original strand, 42386394 - 42386450
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcg 798  Q
    |||||||||  || |||||||||||||||||||||| ||||||| |||| ||||||||    
T  42386394 acacgacactgacccttgtgattacattgaattatg-cattttttcaaattattatcg 42386450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 52903307 - 52903274
Alignment:
Q  140 gacactgacacatataattacactgaattatatg 173  Q
    ||||| ||||||||||||||||||||||||||||    
T  52903307 gacaccgacacatataattacactgaattatatg 52903274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 3791 - 3880
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||| |||||||| |||| ||||||| |||| |||| ||||| ||||| |||| ||||||||||| | |||||||||||||||||    
T  3791 acactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattat 3880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 784
Target Start/End: Original strand, 3826 - 3889
Alignment:
Q  721 atgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcattttt 784  Q
    ||||||| | || ||||||||||||||||  |||||||| |||||| |||||||||| ||||||    
T  3826 atgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgattttt 3889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 42874573 - 42874514
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||||||||||||||||||  |||||| ||| |||||||||||||||    
T  42874573 acacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtc 42874514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 26902108 - 26902206
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||||||| |||| ||||||  || ||||||||||| ||||| |||||  | | ||||| |||||||||||||||||||||||||    
T  26902108 gaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattat 26902206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 684 - 802
Target Start/End: Complemental strand, 27733966 - 27733848
Alignment:
Q  684 ggacacttctgattgaagacgtgttttggtgtccgatatgtgtcatatcggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttt 783  Q
    |||||||||||||||||| ||||||  ||||||||| | || |  | ||||   || ||| ||||| ||||||||||||||||||||||||| |||||||    
T  27733966 ggacacttctgattgaaggcgtgttcgggtgtccgacaagtattgtgtcggtgtccgacatgacaccaacacttgtgattacattgaattatatcatttt 27733867  T
Q  784 tccaaaatattatcggtgt 802  Q
      |||||| ||||||||||    
T  27733866 ctcaaaattttatcggtgt 27733848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 26915248 - 26915307
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||| ||||||||||||||  |||||| ||||| |||||||||||||    
T  26915248 acacttgtgattacattaaattatgtcattttctcaaaattttatccgtgtcgacgtgtc 26915307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 741 - 811
Target Start/End: Complemental strand, 5307122 - 5307053
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||||||  |||||| ||||| |||||||||||||||||||| |||| ||||||| |||||||||||||    
T  5307122 acacgacaccgacacttatgatttcattgaattatgtcattttt-caaattattatcagtgtcgacgtgtc 5307053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 11927019 - 11927117
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||| || |||||||| |||| ||||||  || || ||| |||| |||||| |||| ||||| |||||||||||||||||||||||||    
T  11927019 gaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattat 11927117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 29447570 - 29447472
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||||||| |||||| | ||||||| |||| ||||| ||| |||||||||||  ||| |||||  ||||||||||||||||| ||||||    
T  29447570 gaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattat 29447472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 804
Target Start/End: Original strand, 34073986 - 34074038
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcg 804  Q
    |||||| |||||||||| ||||||||||||||| |||||| ||||||||||||    
T  34073986 acacttatgattacattaaattatgtcattttttcaaaattttatcggtgtcg 34074038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 15816057 - 15816160
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaa 166  Q
    |||| |||||||  ||||| ||| |||||||| ||||||| |||| ||  ||||| ||||| ||||| |||| ||||| ||||| |||||||||||| ||    
T  15816057 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaa 15816156  T
Q  167 ttat 170  Q
    ||||    
T  15816157 ttat 15816160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 732 - 795
Target Start/End: Complemental strand, 25566912 - 25566849
Alignment:
Q  732 cggacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatatta 795  Q
    ||||||||||||||||||  |||||||| |||||| |||||||||| |||||| |||| |||||    
T  25566912 cggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 28384978 - 28385025
Alignment:
Q  123 gtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||    
T  28384978 gtgtctgacactgacatgacaccgacacatataattacactgaattat 28385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 8343442 - 8343344
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| |||||| || |||||||| ||||||| |||| ||||||||| ||||| |||||    | ||||||||||| | |||||||||| ||||||    
T  8343442 gaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattat 8343344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 811
Target Start/End: Complemental strand, 22652045 - 22651968
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||||| |||||||||  |||||||| |||| |||||||||||| |||||| |||| ||||| | |||||| ||||||    
T  22652045 gacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 22651968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 752 - 805
Target Start/End: Original strand, 31548301 - 31548354
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcga 805  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||||||||||    
T  31548301 acacatgtgattacattgaattatgtcattttatcaaataattatcggtgtcga 31548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 783
Target Start/End: Complemental strand, 31119138 - 31119107
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttt 783  Q
    ||||||||||||||||||||||||||||||||    
T  31119138 acacttgtgattacattgaattatgtcatttt 31119107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 809
Target Start/End: Original strand, 10002171 - 10002229
Alignment:
Q  752 acacttgtgattacattgaattatgtca-tttttccaaaatattatcggtgtcgacgtg 809  Q
    |||| |||||||||||| |||||||||| ||||| |||| ||||||||||||| |||||    
T  10002171 acacatgtgattacattaaattatgtcatttttttcaaattattatcggtgtcaacgtg 10002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 812
Target Start/End: Original strand, 10497806 - 10497884
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtct 812  Q
    |||||| |||||| ||  ||||||||||||||||  |||||||| |||||  |||||| ||||| |||||| |||||||    
T  10497806 gacaccgacacgatactgacacttgtgattacatcaaattatgttattttctcaaaattttatccgtgtcggcgtgtct 10497884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 11944791 - 11944693
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  |||||| || |||||||| |||| || |||| || || ||| |||| |||||  |||| ||||| |||||||||||||||||||| ||||    
T  11944791 gaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagttat 11944693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 803
Target Start/End: Complemental strand, 14480184 - 14480138
Alignment:
Q  757 tgtgattacattgaattatgtcatttttccaaaatattatcggtgtc 803  Q
    ||||||||| || |||| ||||||||||||||| |||||||||||||    
T  14480184 tgtgattactttcaattttgtcatttttccaaattattatcggtgtc 14480138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 5813711 - 5813646
Alignment:
Q  68 ctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||||||||||  |||||||||  ||||||| ||||||| |||| ||||||||| ||||| |||||    
T  5813711 ctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 22197684 - 22197773
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||||||||||||| ||  ||| |||| |||||||||  |||| ||||| |   |||||||||||| | |||||||||| ||||||    
T  22197684 acactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacacgacactgacactgacacttgtaattacactaaattat 22197773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 44458 - 44556
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||| ||||| |||||||||  ||||||||  |||| |||||||||||||||  ||||  ||| || || |||||||||||||||||||||||||    
T  44458 gaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattat 44556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 18105 - 18175
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    |||| |||| |||||||| |||||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  18105 acacaacaccaacacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtc 18175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 126822 - 126740
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| || |||| ||||||||||| |||||||  || ||  ||| |||||||||| ||||||||||||  |||||||||    
T  126822 gattaggcgtgacccgttgtcagacacgcgttgtgttcgaaaccgacacgacactgacatatataattacacataattatatg 126740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 71851 - 71755
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaatt 168  Q
    |||||||  ||||||||| |||||| | ||||||| |||| ||||||||||||||| |||||  ||| |||||||||||   |||||||||||||||    
T  71851 gaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaatt 71755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 241720 - 241622
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    |||||||  ||||| ||| |||||||| ||||||| |||| ||||||||| ||||| ||||| |||| ||||| |||||  ||||||||||| ||||||    
T  241720 gaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattat 241622  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 236918 - 236964
Alignment:
Q  72 gaagcacatacactcctcagattaggcatgtcccgatgtcagacacg 118  Q
    |||||||| |||||||||||||||||  ||||||| |||||||||||    
T  236918 gaagcacagacactcctcagattaggtgtgtcccggtgtcagacacg 236964  T

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Target: scaffold0003; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 811
Target Start/End: Complemental strand, 241663 - 241586
Alignment:
Q  734 gacaccaacacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||||||||||  |||||  | |||||| | |||||||| ||||||||||| ||||| | |||||| ||||||    
T  241663 gacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtc 241586  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 263314 - 263403
Alignment:
Q  81 acactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattat 170  Q
    ||||||||| |||||||| ||||  | | ||  |||||||| |||||||||||  ||| ||||||||||| |||||||||||||||||||    
T  263314 acactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattat 263403  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 4975 - 5041
Alignment:
Q  67 gctacgaagcacatacactcctcagattaggcatgtcccgatgtcagacacgtgttgtgtctgacac 133  Q
    |||| |||||||| ||||||||| ||||||||||||| | ||||| ||||||||| ||||| |||||    
T  4975 gctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacac 5041  T

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Target: scaffold0314 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 798
Target Start/End: Complemental strand, 8999 - 8953
Alignment:
Q  752 acacttgtgattacattgaattatgtcatttttccaaaatattatcg 798  Q
    |||||||||||||| |||||||||||||||||  |||||| ||||||    
T  8999 acacttgtgattacgttgaattatgtcattttctcaaaattttatcg 8953  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 84925 - 85007
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| ||||| | |||| ||||||||||||||  ||||   ||||||||| |||| ||||||||||||  |||||||||    
T  84925 gattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatg 85007  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 56477 - 56395
Alignment:
Q  91 gattaggcatgtcccgatgtcagacacgtgttgtgtctgacacaaacatgacactgacacatataattacactgaattatatg 173  Q
    |||||||| || |||| ||||||||||| |||||||  || ||  ||| |||||||||| ||||||||||||  |||||||||    
T  56477 gattaggcgtgacccgttgtcagacacgcgttgtgttcgaaaccgacacgacactgacatatataattacacataattatatg 56395  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 811
Target Start/End: Complemental strand, 99955 - 99885
Alignment:
Q  741 acacgacacaaacacttgtgattacattgaattatgtcatttttccaaaatattatcggtgtcgacgtgtc 811  Q
    ||||||||| ||||| | | ||||||||||||||||| |||||   ||| |||||||||||||||| ||||    
T  99955 acacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

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