View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11668_low_79 (Length: 210)
Name: NF11668_low_79
Description: NF11668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11668_low_79 |
 |  |
|
| [»] scaffold0217 (1 HSPs) |
 |  |  |
|
| [»] scaffold0394 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 34206019 - 34205838
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
34206019 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggtggcagcgtccccttacttgtttagggat |
34205920 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34205919 |
tggctgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
34205838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 4163728 - 4163547
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
4163728 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggcggcagcgtccccttgcttgtttagggat |
4163629 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4163628 |
tggctgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaactttgttttgtctcctttg |
4163547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 43109355 - 43109536
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
43109355 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggcggcagcgtccccttgcttgtttagggat |
43109454 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
43109455 |
tgactgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaactttgttttgtctcctttg |
43109536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 45459121 - 45459014
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| ||| || |||||| |||||||||| ||||| |
|
|
| T |
45459121 |
aggttaagattacatctctcaagtggttgaaagcaaaaaatgtgtgctttccatttggttatcatatgtagtgacaacgtccctttgcttgtttggggat |
45459022 |
T |
 |
| Q |
119 |
tggctgat |
126 |
Q |
| |
|
|||||||| |
|
|
| T |
45459021 |
tggctgat |
45459014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 39295824 - 39295933
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| ||||||||||||||||| | ||||||||| || |||||||||| | ||||||| |||||| ||||| |
|
|
| T |
39295824 |
aggttaagattatatctctcagatggttgaaaacaaaaaatgtgtgcttttcatttggttattatatgtggtggcagcatccccttatttgtttggggat |
39295923 |
T |
 |
| Q |
119 |
tggctgatgt |
128 |
Q |
| |
|
|| ||||||| |
|
|
| T |
39295924 |
tgactgatgt |
39295933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 21431401 - 21431477
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||| |||||||||||| |
|
|
| T |
21431401 |
tggttgaaagctaaaaatgtgtgcttttcttttggttatcatttatggtggcaacatccccttgtttgtttagggat |
21431477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 32703121 - 32703038
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||| |||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
32703121 |
tggttgaaagctaaaaaagtgtgcttttcttttggttataatttatggtggcagcatccccttgtttgtttagggataggctga |
32703038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 5651939 - 5652001
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtcccctt |
104 |
Q |
| |
|
||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| | ||||||| |
|
|
| T |
5651939 |
tggttgaaagctaaaaatgtgtgtttttcttttggttatcatttgtggtggcagcatcccctt |
5652001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 18014982 - 18014897
Alignment:
| Q |
42 |
tggttgaaagcaaaaaa-tgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgat |
126 |
Q |
| |
|
||||||||||||||||| |||||| ||| |||| ||||||| |||||||||| |||||| |||||||||| |||||||| |||| |
|
|
| T |
18014982 |
tggttgaaagcaaaaaaatgtgtgttttttatttgattatcatatgtggtggcagcgtccctttgcttgtttggggattggttgat |
18014897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 8606909 - 8606986
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggatt |
119 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| ||| |||||||| | | ||||||| |||||| |||||| |
|
|
| T |
8606909 |
tggttgaaagctaaaaatgcttgctttccttttggttaccatatgtggtgggagcaaccccttgtttgtttggggatt |
8606986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 3153689 - 3153870
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
3153689 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggtggcagcgtccccttgtttgtttagggat |
3153788 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3153789 |
tgactgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
3153870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 10060031 - 10059850
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
10060031 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggcggcagcgtccccttgcttgtttagggat |
10059932 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10059931 |
tggctgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaactttgttttgtctcctttg |
10059850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 79464 - 79290
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
79464 |
aggttaagattacatctctcaaatggttaaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcagcgtccccttgcttgtttagggat |
79365 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
79364 |
tggctgat-------gtattattcgttcatgtcttttgtggtttgattggaactattttgtaacctcgttttgtctcctttg |
79290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 6432786 - 6432640
Alignment:
| Q |
53 |
aaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgtatgatgtatttttcgttcatgtct |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6432786 |
aaaaaatgtgtgctttccttttggttatcatttgtggtggcagcgtccccttgcttgtttagggattggctgatgtatgatgtatttttcgttcatgtc- |
6432688 |
T |
 |
| Q |
153 |
tttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6432687 |
tttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
6432640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 44939919 - 44939745
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||| |||||||||| |
|
|
| T |
44939919 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttgattatcatttgtggtggcagcatccccttgctggtttagggat |
44939820 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44939819 |
tggctgat-------gtattattcgttcatgtcttttgtggtttgattggaactattttgtaaccttattttgtctcctttg |
44939745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 1222638 - 1222548
Alignment:
| Q |
40 |
aatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgtat |
130 |
Q |
| |
|
|||||||||||| |||||||||||| ||| |||||||||| ||| |||||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
1222638 |
aatggttgaaagtaaaaaatgtgtgtttttcttttggttaccatatgtggtggcagcgtccccttacttgtttggggattggctgatgtat |
1222548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 6469134 - 6469058
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||||||| || ||||||||| |
|
|
| T |
6469134 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccccttgtttatttagggat |
6469058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 14164059 - 14163979
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggc |
122 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
14164059 |
tggttgaaagcaaaaaatgtgtgctttccctttggttatcatatgtggtggcagaatccccttgcatgtttggggattggc |
14163979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 34385467 - 34385381
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||| |||| |||||||| | |||||||| |||||||||||||| ||||||| |
|
|
| T |
34385467 |
tggttgaaagataaaaatgtgtgttttccttttggttactatttatggtggcagcatccccttgtttgtttagggattgactgatgt |
34385381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 536308 - 536384
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||| |||||||| |||||||| | |||||||| |||||||||||| |
|
|
| T |
536308 |
tggttgaaagctaataatgtgtgatttccttttggctatcatttatggtggcagcatccccttgtttgtttagggat |
536384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 39768586 - 39768695
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||| | || |||||||| |||||||| |||||||||||| |||||||| |||||||||| | ||| |||| ||||| ||||| |
|
|
| T |
39768586 |
aggttaagattacatcttttcggtgattgaaagctaaaaatgtttgctttccttttagttatcatatgtggtggcagcatcctcttgtctgtttggggat |
39768685 |
T |
 |
| Q |
119 |
tggctgatgt |
128 |
Q |
| |
|
|| ||||||| |
|
|
| T |
39768686 |
tgactgatgt |
39768695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 34358876 - 34358801
Alignment:
| Q |
45 |
ttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||| |||||| ||||||| |
|
|
| T |
34358876 |
ttgaaagctaaaaatgtaagctttccttttggttatcatatgtggtggcatcaaccccttttttgtttggggattg |
34358801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 23290007 - 23289924
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| || ||||| || |||||||||||||| || |||||||||| | ||||||| |||||| |||||||||||| |
|
|
| T |
23290007 |
tggttgaaagctaagaatgtttgatttccttttggttaccacatgtggtggcaacaaccccttgtttgtttggggattggctga |
23289924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 32598834 - 32598788
Alignment:
| Q |
66 |
tttccttttggttatcatttgtggtggcatcgtccccttgcttgttt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
32598834 |
tttccttttggttatcatttgtggtggcagcaaccccttacttgttt |
32598788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 16203029 - 16203074
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtg |
91 |
Q |
| |
|
||||||| |||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
16203029 |
tgaaagctaaaaatgtatgttttccttttggttatcatatgtggtg |
16203074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 17930762 - 17930709
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||| | | |||||||||| |
|
|
| T |
17930762 |
atggttgaaagctaaaaatgtttgctttccctttggttaccttatgtggtggca |
17930709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 10386364 - 10386545
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
10386364 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttatggcggcagcgtccccttgcttgtttagggat |
10386463 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10386464 |
tggctgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaactttgttttgtctcctttg |
10386545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 6333082 - 6333193
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
6333082 |
aggttaagattatatctcttaaatggttgaaagaaaaaaatgtgtgctttccttttggttaccatatgtggtggcaacgtccccttacttgtttggggat |
6333181 |
T |
 |
| Q |
119 |
tggctgatgtat |
130 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6333182 |
tggctgatgtat |
6333193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 31458921 - 31458838
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
31458921 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
31458838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 35368405 - 35368488
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
35368405 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
35368488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 36193272 - 36193355
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
36193272 |
tggttgaaagctaaaaatgtgtgcttttcttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
36193355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 24561548 - 24561624
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
24561548 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggtaaaatccccttgcttgtttagggat |
24561624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 32641537 - 32641454
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||| |
|
|
| T |
32641537 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccccttctgtgtttagggataggctga |
32641454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 51128585 - 51128502
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||||||||||||| |||||||| | |||| ||| |||||||||||| |||||| |
|
|
| T |
51128585 |
tggttgaaaactaaaaatgtgtgcttttcttttggttatcatttatggtggcagcatccctttgtttgtttagggataggctga |
51128502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 22560261 - 22560337
Alignment:
| Q |
44 |
gttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |
|
|
| T |
22560261 |
gttgaaagctaaaaatgtttgctttccttttggttatcatttacggtggcagcaaccccttgcttgtttggggattg |
22560337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 51169743 - 51169660
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgtat |
130 |
Q |
| |
|
||||| |||||||||| || || ||||||||||||||| |||||||||| | |||||| | |||||| ||||||||||||||||| |
|
|
| T |
51169743 |
tgaaaacaaaaaatgtttgtttcccttttggttatcatgtgtggtggcagcatcccctggtttgttt-gggattggctgatgtat |
51169660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 39415863 - 39415809
Alignment:
| Q |
40 |
aatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||| ||| |||||||||| |
|
|
| T |
39415863 |
aatggttgaaagctaaaaatgtttgctttccctttggttaccatatgtggtggca |
39415809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 22816621 - 22816541
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattgg |
121 |
Q |
| |
|
|||| ||||||| |||||||| | |||||||||||||||||| |||||||||||| || |||| |||||||| ||||| |
|
|
| T |
22816621 |
atggctgaaagctaaaaatgtatattttccttttggttatcatatgtggtggcatcaacctcttgtctgtttaggcattgg |
22816541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 39495834 - 39495764
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtt |
111 |
Q |
| |
|
|||||||||||| |||||||| | ||||| ||||||||| ||||| |||||||| | ||||||| ||||| |
|
|
| T |
39495834 |
atggttgaaagctaaaaatgtattctttcattttggttaccatttatggtggcaacaaccccttgtttgtt |
39495764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 38029786 - 38029834
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||||| ||||| || || |||||||||||||| |||||||||||||| |
|
|
| T |
38029786 |
tgaaagccaaaaaagtttgttttccttttggttaccatttgtggtggca |
38029834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 146; Significance: 4e-77; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 26710920 - 26710748
Alignment:
| Q |
21 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26710920 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcagcgtccccttgcttgtttagggattg |
26710821 |
T |
 |
| Q |
121 |
gctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26710820 |
gctgat-------gtatttatcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
26710748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 16467108 - 16466934
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16467108 |
aggttaagattacatctctcaaatggttgaaaacaaaaaatgtgtgctttccttttgattatcatttgtggtggcagcgtccccttgcttgtttagggat |
16467009 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16467008 |
tggctgat-------gtatttttcgttcatgtcttttgtggtttaattggaactattttgtaaccttgttttgtctcctttg |
16466934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 33146919 - 33147092
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
33146919 |
aggttaagattacatctctcaaatggttgaaatcaaaaaatacgtgctttccttttggttatcatttgtggtggcagcgtccccttgcttgtttagagat |
33147018 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctccttt |
199 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
33147019 |
tgac-------tgatgtatttttcgttcatgtcttttgtggtttgattggaactatcttgtaaccttgttttgtctccttt |
33147092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 1309118 - 1309292
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||| |||| |
|
|
| T |
1309118 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgttttccttttggttatcatttgtggtgacagcgcccccttgcttgtttaaggat |
1309217 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1309218 |
tggc-------tgatgtattattcgtccatatcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
1309292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 3490291 - 3490402
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
3490291 |
aggttaagattatatctcttaaatggttgaaagcaaaaaatgtgtgctttccttttggttaccatatgtggtggcagcgtccccttacttgtttggggat |
3490390 |
T |
 |
| Q |
119 |
tggctgatgtat |
130 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
3490391 |
tgactgatgtat |
3490402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 31933939 - 31933828
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
31933939 |
aggttaagattatatctcttaaatggttgaaagcaaaaaatgtgtgctttccttttggttaccatatgtggtggcagcgtccccttacttgtttggggat |
31933840 |
T |
 |
| Q |
119 |
tggctgatgtat |
130 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
31933839 |
tgactgatgtat |
31933828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 33754645 - 33754728
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
33754645 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcaaaatccccttgcttgtttagggataggctga |
33754728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 17714069 - 17714152
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||||| | ||||||| |||| |||||| |
|
|
| T |
17714069 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatcccctagattgtttaaggataggctga |
17714152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 24991498 - 24991580
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||| ||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
24991498 |
tggttgaaagctaaaaatgtgtgctt-ctttttgattatcatttatggtggcagcatccccttgtttgtttagggataggctga |
24991580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 19617298 - 19617382
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgat |
126 |
Q |
| |
|
||||||||||| || |||| |||||| ||||||||| ||| |||||||||| | ||||||| |||||| ||||||||||||| |
|
|
| T |
19617298 |
tggttgaaagctaagaatgcttgcttttcttttggttcacatatgtggtggcagcaaccccttgtttgtttggggattggctgat |
19617382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 30937110 - 30937290
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30937110 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgattttcttttggttatcatttgtggtggcagcgtccccttgcttgtttagggat |
30937209 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
30937210 |
tgagtgatgtatgatgtatttttcgttcatgtcttttatggtttgattggaacta-tttgtaaccttgttttgtctcatttg |
30937290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16897026 - 16897201
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaa-aatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttaggga |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16897026 |
aggttaagattacatctctcaaatggttgaaagcaaaaaaatgtgtgctttccttttggttatcatttgtggtggcagcgtccccttgcttgtttaggga |
16897125 |
T |
 |
| Q |
118 |
ttggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16897126 |
ttgac-------tgatgtattattcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
16897201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 31644619 - 31644445
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
31644619 |
aggttaagattacatctctcaaatggttgaaagtaaaaaatgtgtgttttccttttggttatcatttgtggtggcagcgtccccttgtttgtttagggat |
31644520 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31644519 |
tagc-------tgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
31644445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 50543106 - 50543278
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||| | |||||||||||||||| |
|
|
| T |
50543106 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatatgtgcttttctttttattatcatttgtggtggcagcgtctcattgcttgtttagggat |
50543205 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctccttt |
199 |
Q |
| |
|
|| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50543206 |
tgactgatgta--------tttttgttgatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctccttt |
50543278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 40969903 - 40969796
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||| ||||| |
|
|
| T |
40969903 |
aggttaagattacatctctcaagtggttgaaagcaaaaaatgtgtgctttccatttggttatcatatgtggtggcaacgtccctttgcttgtttggggat |
40969804 |
T |
 |
| Q |
119 |
tggctgat |
126 |
Q |
| |
|
|||||||| |
|
|
| T |
40969803 |
tggctgat |
40969796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 11583751 - 11583574
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||| |||||||||| |||| |||||||||||| ||||| |
|
|
| T |
11583751 |
aggttaagattacatctctcaaattgttgaaagcaaaaaatgtgtgttttccatttggttaccatatgtggtggcagcgtctccttgcttgtttcgggat |
11583652 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtgg-tttgattggaactattttgtaaccttgttttgtctccttt |
199 |
Q |
| |
|
||| |||| ||| || ||||| || |||||||||||| |||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
11583651 |
tggttgatttat-at---ttttttcttgctgtcttttgtggttttgatcagaactcttttgtaaccttgttttgtttccttt |
11583574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 19232775 - 19232695
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtc |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
19232775 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggatatcatttgtggtggcagcgtc |
19232695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 19229899 - 19229803
Alignment:
| Q |
97 |
gtccccttgcttgtttagggattggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcc |
196 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19229899 |
gtccccttccttgtttagggattggctgatgtat-------ttttcgttcatgtctattgtggtttgattggaactattttgtaaccttgttttgtctcc |
19229807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 53050645 - 53050540
Alignment:
| Q |
21 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| | |||||||| | |||| |||||||||| ||||||| |
|
|
| T |
53050645 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgtttttcatttggttatcatatatggtggcaacatccctttgcttgtttggggattg |
53050546 |
T |
 |
| Q |
121 |
gctgat |
126 |
Q |
| |
|
|||||| |
|
|
| T |
53050545 |
gctgat |
53050540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 19653231 - 19653307
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
19653231 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcaaaatccccttgcttgtttagggat |
19653307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 15372355 - 15372437
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctg |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||| ||| |||||||||||| ||||| |
|
|
| T |
15372355 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccctttgtttgtttagggataggctg |
15372437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 25617563 - 25617646
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| |||||||| | |||| ||| |||||||||||| |||||| |
|
|
| T |
25617563 |
tggttgaaagctaaaaatgtgtgcttttcttttggttatcatttatggtggcagcatccctttgtttgtttagggataggctga |
25617646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 33980683 - 33980601
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
33980683 |
tggttgaaagctaaaaatgtgtgctttccttttg-ttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
33980601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 7922376 - 7922469
Alignment:
| Q |
33 |
tctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgat |
126 |
Q |
| |
|
|||||| | ||||| ||| | |||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||| ||||||||||||| |
|
|
| T |
7922376 |
tctctcgactggttaaaaactaaaaatgtgtgctttccttttggttatcatttatggtggcaacatccccttgtctgtttggggattggctgat |
7922469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 50029115 - 50029039
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
50029115 |
tggttgaaagttaaaaatgtgtgctttccttttggttatcatttatggtggcaaaatcctcttgcttgtttagggat |
50029039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 26376655 - 26376738
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||| ||| |||||||||| | ||||||| |||||| |||||||||||| |
|
|
| T |
26376655 |
tggttgaaagctaagaatgtttgctttccttttggttaccatatgtggtggcaacaaccccttgtttgtttggggattggctga |
26376738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 37166291 - 37166374
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||| | ||||| ||||| |||||||||||||| ||| |||||||||| | ||||||| |||||| ||||||| |||| |
|
|
| T |
37166291 |
tggttgaaaactaaaaacgtgtgttttccttttggttaccatatgtggtggcagcaaccccttgtttgtttggggattgactga |
37166374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 27874374 - 27874336
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttat |
80 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27874374 |
tggttgaaagctaaaaatgtgtgctttccttttggttat |
27874336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 37835777 - 37835863
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
||||||||||| |||||| | || |||| ||||||| ||||| |||||||||| | |||||||| |||||| | ||||| ||||||| |
|
|
| T |
37835777 |
tggttgaaagctaaaaatatatgttttctttttggtcatcatatgtggtggcaacatccccttgtttgtttggagattgactgatgt |
37835863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 14608898 - 14608979
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||||||| ||| |||||||||| | ||||||| |||||| |||||||||||| |
|
|
| T |
14608898 |
tggttgaaagctaaaaatgt-agctttccatttggttaccatatgtggtggcaacaaccccttgtttgttt-gggattggctga |
14608979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 30819299 - 30819251
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||| |||||||||| || |||||||||||||||||| |||| ||||| |
|
|
| T |
30819299 |
tgaaaacaaaaaatgtttgttttccttttggttatcatatgtgttggca |
30819251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 43599178 - 43599004
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
43599178 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgttttccttttagttatcatttgtggtggcagcgtccccttgcttgtttagggat |
43599079 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43599078 |
tgg-------ttgatgtattattcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
43599004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 13403771 - 13403600
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
13403771 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttgattatcattt---gtggcagcgtccccttgcttgtttagggat |
13403675 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13403674 |
tgac-------tgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
13403600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 24732829 - 24732718
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| | ||| |
|
|
| T |
24732829 |
aggttaagattatatctcttaaatggttgaaagcaaaaaatgtgtgctttccttttggttaccatatgtggtggcagcgtccccttgcttgtttggagat |
24732730 |
T |
 |
| Q |
119 |
tggctgatgtat |
130 |
Q |
| |
|
|||||||||||| |
|
|
| T |
24732729 |
tggctgatgtat |
24732718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 41692211 - 41692321
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||| ||||| |
|
|
| T |
41692211 |
aggttaagattatatctcttaaatggttgaaagcaaaaaatgtgtgctttccttatggttatcatatgtggtggcagcgtccccttgactgtttggggat |
41692310 |
T |
 |
| Q |
119 |
tggctgatgta |
129 |
Q |
| |
|
||||||||||| |
|
|
| T |
41692311 |
tggctgatgta |
41692321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 38891839 - 38891922
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||| |||| ||| | |||||||| |||||||||||| |||||| |
|
|
| T |
38891839 |
tggttgaaagctaaaaatgtgtgctttcctcttggttatcatttatggtagcagcatccccttgtttgtttagggataggctga |
38891922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 12230412 - 12230360
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| ||| |||||||||| |
|
|
| T |
12230412 |
tggttgaaagcgaaaaatgtttgctttccttttggttaccatatgtggtggca |
12230360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 38948328 - 38948502
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || |
|
|
| T |
38948328 |
aggttaagattacatctctcaaattgttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcagcatccccttgcttgtttaggaat |
38948427 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38948428 |
tgac-------tgatgtattattcgtttatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
38948502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 53679564 - 53679737
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
53679564 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtatgcttttcttttggatatcatttgtggtggcagcgtccacttgcttgtttagggat |
53679663 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctccttt |
199 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
53679664 |
tggc-------tgatgtattttttgttgatgtcttttgtggtttgattggaactattttgtaaccttattttgtctccttt |
53679737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 19836822 - 19836717
Alignment:
| Q |
21 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
19836822 |
gttaagattacatctctcaagtggttgaaagcaaaaaatgtgtgctttccatttggttatcatatgtggtggcaacgtccctttgcttgtttggggattg |
19836723 |
T |
 |
| Q |
121 |
gctgat |
126 |
Q |
| |
|
|||||| |
|
|
| T |
19836722 |
gctgat |
19836717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 19310038 - 19310149
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
19310038 |
aggttaagatcatatctcttcaatggttgaaagcaaaaaatgtgtgctttccttttggttaccatgtgtggtggcagcgtccccttacttgtttggggat |
19310137 |
T |
 |
| Q |
119 |
tggctgatgtat |
130 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19310138 |
tggctaatgtat |
19310149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 43470258 - 43470429
Alignment:
| Q |
21 |
gttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||| |||| ||| ||| ||||||| |
|
|
| T |
43470258 |
gttatgattacttctcttaaatggttgaaagcaaaaaatgtgtgctttccttttggttaccatatgtggtggtagcgtctccttacttatttggggattg |
43470357 |
T |
 |
| Q |
121 |
gctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctccttt |
199 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
43470358 |
attgatgta------atttttctttgttgtcttttgtggtttgattggaacta-tttgtaattttgttttgtttccttt |
43470429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 32045521 - 32045601
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgat |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
32045521 |
tgaaagctaaaaatgtgtgctttccttttggttatcattcatggtggcagcatccccttgtttgtttagggattggctgat |
32045601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 7446426 - 7446343
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
7446426 |
tggttgaaagctaaaaatatgtgctttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
7446343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 10009663 - 10009746
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
10009663 |
tggttgaaagctaaaaatgtgtgttttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
10009746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 26017669 - 26017752
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
26017669 |
tggttgaaagccaaaaatgtgtgttttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
26017752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 8933185 - 8933290
Alignment:
| Q |
23 |
taagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggc |
122 |
Q |
| |
|
|||||||||||| ||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||| |
|
|
| T |
8933185 |
taagattacatccctccgatggctaaaagcaaaaaatatgtgctttccttttggttatcatatgtggtggcagcatccccttatttgtttggggattggt |
8933284 |
T |
 |
| Q |
123 |
tgatgt |
128 |
Q |
| |
|
|||||| |
|
|
| T |
8933285 |
tgatgt |
8933290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 14528415 - 14528328
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||||||| ||| ||||| |||| | |||| |||||||||| ||||||| |||||| |
|
|
| T |
14528415 |
atggttgaaatctaaaaatgtgtgcttcccttttggttaccatatgtggcggcagcatccctttgcttgtttgaggattggttgatgt |
14528328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 25459497 - 25459576
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattg |
120 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||| ||||||| |
|
|
| T |
25459497 |
atggttgaaagcttaaaatgtatgctttccttttgattatcatatgtggtggcagaacccccttgcttgtttggggattg |
25459576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 36188748 - 36188698
Alignment:
| Q |
41 |
atggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtg |
91 |
Q |
| |
|
|||||||||||| |||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
36188748 |
atggttgaaagctaaaaatgtttgttttccttttggttatcatatgtggtg |
36188698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 21479319 - 21479267
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||||||| | || ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
21479319 |
tggttgaaatctaagaatgtttgctttccttttggttatcatatgtggtggca |
21479267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 25242016 - 25241945
Alignment:
| Q |
54 |
aaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| || ||||||| | |||||| |||||| |||||||||||| |
|
|
| T |
25242016 |
aaaaatgtatgctttccttttggttaccatatgcggtggcaacaatcccttgtttgtttggggattggctga |
25241945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 38654775 - 38654697
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||| ||||| |||| ||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
38654775 |
tggttgaaagctaaaaaagtgtgttttc-----ggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
38654697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 5592314 - 5592388
Alignment:
| Q |
20 |
ggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
|||||| |||||||| || |||||||||||| ||||||||||| ||||| |||| || |||||||||||||| |
|
|
| T |
5592314 |
ggttaaaattacatcccttcgatggttgaaagctaaaaatgtgtgatttccctttgactaccatttgtggtggca |
5592388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 48126056 - 48125982
Alignment:
| Q |
20 |
ggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
|||||| |||||||| || |||||||||||| ||||||||||| ||||| |||| || |||||||||||||| |
|
|
| T |
48126056 |
ggttaaaattacatcccttcgatggttgaaagctaaaaatgtgtgatttccctttgactaccatttgtggtggca |
48125982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 13840874 - 13840822
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggca |
94 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| || |||| |||||||||| |
|
|
| T |
13840874 |
tggttgaaagctaaaaacatgtgctttccttttgattctcatatgtggtggca |
13840822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 3417656 - 3417482
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
3417656 |
aggttaagattacatctctcaaatgattgaaagcacaaaatgtgtgctttccttttggttatcatatgtggtggcagcgtccccttgcttgtttagggat |
3417557 |
T |
 |
| Q |
119 |
tggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaaccttgttttgtctcctttg |
200 |
Q |
| |
|
|| | |||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3417556 |
tgac-------tgatgtattttttgttgatgtcttttgtggtttgattgaaactattttgtaaccttgttttgtctcctttg |
3417482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 41611206 - 41611088
Alignment:
| Q |
82 |
atttgtggtggcatcgtccccttgcttgtttagggattggctgatgtatgatgtatttttcgttcatgtcttttgtggtttgattggaactattttgtaa |
181 |
Q |
| |
|
|||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41611206 |
atttatggcggcagcgtccccttgcttgtttagggattggctgatgtatgatgtatttttcgttcatatcttttgtggtttgattggaactattttgtaa |
41611107 |
T |
 |
| Q |
182 |
ccttgttttgtctcctttg |
200 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
41611106 |
ctttgttttgtctcctttg |
41611088 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 841673 - 841560
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaat--gtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttaggg |
116 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||| ||||||||||||||||| ||| |
|
|
| T |
841673 |
aggttaaaattacatctctcaaatggttgaaagcaaaaaatatgtgtgctttccatttgtgtatcatatgtggtggcaacgtccccttgcttgtttgggg |
841574 |
T |
 |
| Q |
117 |
attggctgatgtat |
130 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
841573 |
attgactgatgtat |
841560 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 28639230 - 28639313
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |
|
|
| T |
28639230 |
tggttgaaagccaaaaatgtgtgctttccttttggttatcatttatggtggcagcatccccttgtttgtttagggataggctga |
28639313 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 2680816 - 2680716
Alignment:
| Q |
29 |
tacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||| || |||||||| ||||| |||||||||| |||| |
|
|
| T |
2680816 |
tacatctctcaaatggttgaaagcattaaatgtatgctttccatttggttatcatatgtggtggcagcgcccccttgcatgttt-gggattggcttatgt |
2680718 |
T |
 |
| Q |
129 |
at |
130 |
Q |
| |
|
|| |
|
|
| T |
2680717 |
at |
2680716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 10468892 - 10468809
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||| | | |||||||| |||||||||||| |||||| |
|
|
| T |
10468892 |
tggttgaaagctaaaaatgtgtgctttccttttggttatcatttatggtggaagcatccccttgtttgtttagggataggctga |
10468809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 26501497 - 26501413
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgt-ccccttgcttgtttagggattggctga |
125 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||| |||||||| | | ||||||| |||||||||||| |||||| |
|
|
| T |
26501497 |
tggttgaaagctaaaaatgtgtgctctccttttggttatcatttatggtggcagcatcccccttgtttgtttagggataggctga |
26501413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 38707237 - 38707183
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatc |
96 |
Q |
| |
|
||||||||||| | |||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
38707237 |
tggttgaaagctagaaatgtttgctttccttttggttatcatatgtggtggcatc |
38707183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 42495389 - 42495283
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| ||||||||||| ||| |||||||||||||| |||||||| | | ||||||| |||||| ||||| |
|
|
| T |
42495389 |
aggttaagattacatctctttggtggctgaaagccaaaaatgtgtgtttttcttttggttatcatatgtggtgg--tagcccccttg-ttgtttggggat |
42495293 |
T |
 |
| Q |
119 |
tggctgatgt |
128 |
Q |
| |
|
|| ||||||| |
|
|
| T |
42495292 |
tgactgatgt |
42495283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 16422154 - 16422240
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
||||||||||| ||||||||||| ||| || ||| || |||| |||||||||| | |||||||| |||||| |||||| ||||||| |
|
|
| T |
16422154 |
tggttgaaagctaaaaatgtgtgtttttctcttgattgtcatatgtggtggcagcatccccttgtttgtttgaggattgactgatgt |
16422240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 33023571 - 33023621
Alignment:
| Q |
46 |
tgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatc |
96 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||| ||||| |||||| |
|
|
| T |
33023571 |
tgaaagctaaaaatgtgtgttttccttttggttatcatatgtggcggcatc |
33023621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 40526010 - 40526065
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatt-tgtggtggcatc |
96 |
Q |
| |
|
||||||||||| |||||||| || |||| |||||||||||||| |||||||||||| |
|
|
| T |
40526010 |
tggttgaaagctaaaaatgtatgttttctttttggttatcattatgtggtggcatc |
40526065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0217 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0217
Description:
Target: scaffold0217; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 8249 - 8355
Alignment:
| Q |
19 |
aggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggat |
118 |
Q |
| |
|
|||| |||||||| ||||| | ||||||||||| |||||||| ||||||||||||||||| ||| |||||||||| || ||||| | |||||| ||||| |
|
|
| T |
8249 |
aggtcaagattacttctcttacctggttgaaagctaaaaatgtttgctttccttttggttaccatatgtggtggcagcgacccctagattgtttggggat |
8348 |
T |
 |
| Q |
119 |
tggctga |
125 |
Q |
| |
|
||||||| |
|
|
| T |
8349 |
tggctga |
8355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 5261 - 5347
Alignment:
| Q |
42 |
tggttgaaagcaaaaaatgtgtgctttccttttggttatcatttgtggtggcatcgtccccttgcttgtttagggattggctgatgt |
128 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||||||||||| |||| || | |||| ||| |||||| ||||||| ||||||| |
|
|
| T |
5261 |
tggttgaaagctaaaaatgtatgttttccttttggttatcatttatggtaacagcatccctttgtttgtttggggattgactgatgt |
5347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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