View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11669_high_24 (Length: 247)
Name: NF11669_high_24
Description: NF11669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11669_high_24 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 15927079 - 15926843
Alignment:
| Q |
1 |
atgtcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtg |
100 |
Q |
| |
|
|||||||||||||||||| || ||| |||||||||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
15927079 |
atgtcaaaatgcaaaatttgcatgttacatccttgatgtaagtaagccataccacgagcaactccaagagatatctcatacatttgcttataagttagag |
15926980 |
T |
 |
| Q |
101 |
agattgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaat |
200 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
15926979 |
agatagcatcctcgctagaagaaatatatttatcaagagaaccattgggcatgaattcataaacaagagcacgctttgatccctcaacacaaaatccaat |
15926880 |
T |
 |
| Q |
201 |
aagtcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15926879 |
aagtcgaactacattggtgtgatgtattcttcctatg |
15926843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 30960860 - 30960812
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagc |
170 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||||| | |||||| |
|
|
| T |
30960860 |
aaatatatttgtcaagagaaccattggacataaattcatatacaagagc |
30960812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 9254911 - 9254675
Alignment:
| Q |
1 |
atgtcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtg |
100 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| || ||| |||| | |
|
|
| T |
9254911 |
atgtcaaaatgcaaaatttgcatttcgcatccttgatgtaaataagcaataccatgagccactccaagagatatctcgtacattttctgataacttagag |
9254812 |
T |
 |
| Q |
101 |
agattgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaat |
200 |
Q |
| |
|
|||| | ||||||||| || |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
9254811 |
agatagtatcctctctagaggaaatatatttatcaagagaaccattggacatgaattcataaacaagagcacgctttgatccctcaacacaaaacccaat |
9254712 |
T |
 |
| Q |
201 |
aagtcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9254711 |
aagtcgagccacattggtgtgatgtattcttcctatg |
9254675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 9320132 - 9320365
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
||||||||||||||| || |||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| || ||| |||| |||| |
|
|
| T |
9320132 |
tcaaaatgcaaaatttgcatgtcacatccttgatgtaaataagccataccacgagccactccaagagatatctcatacattttctgataatttagagaga |
9320231 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| | ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
9320232 |
tagtatcctctctagaggaaatatatttatcaagagagccattggacatgaattcataaacaagagcacgctttgatccttcaacacaaaacccaataag |
9320331 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
9320332 |
tcgaaccacattggtgtgatgtattcttcctatg |
9320365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 9350449 - 9350682
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
||||||||||||||| || |||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||||| || ||| |||| |||| |
|
|
| T |
9350449 |
tcaaaatgcaaaatttgcatgtcacatccttgatgtaaataagccataccacgagccactccaacagatatctcatacattttctgataacttagagaga |
9350548 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| | ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
9350549 |
tagtatcctctctagaggaaatatatttatcaagagagccattggacatgaattcataaacaagagcacgctttgatccttcaacacaaaacccaataag |
9350648 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |
|
|
| T |
9350649 |
tcaaaccacattggtgtgatgtattcttcctatg |
9350682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 9318170 - 9317937
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
||||||||||| ||| || |||| ||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||| | |
|
|
| T |
9318170 |
tcaaaatgcaagatttgcatgtcacatccttcatgcaaataagcaattccacgagccactccaagagatatctcatacattttcttgcaagttagatcaa |
9318071 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| |||| ||| | || ||||| |||||||||||||| || ||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
9318070 |
taacatcatctttagaggaaatgtatttatcaagagagccgttgggcatgaattcataaacaagtgcacgttttgatctctcaaaacaaaaaccaataag |
9317971 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
|| ||||||||| | || ||||||||||||||| |
|
|
| T |
9317970 |
tctaaccacatttgcatggtgtattcttcctatg |
9317937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 8956253 - 8956486
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
|||||||| |||||| || |||| || |||||||| ||||||||||| ||||| || |||||||| |||||||||||||||||||| ||||||| || | |
|
|
| T |
8956253 |
tcaaaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaactccaagagatatctcatacatttgcttataagttaaggaaa |
8956352 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| ||| || || || ||||||||| |||||||||| |||||||||||||| ||||||| ||||||||| ||||||| ||||| ||||| |||| ||| |
|
|
| T |
8956353 |
tatgatcttccctagaggaaatatatctatcaagagagccattgggcatgaaatcataaacaagagcacgttttgatccctcaatgcaaaatccaacaag |
8956452 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||| |
|
|
| T |
8956453 |
tcgcaccacattggtgtgatgtatttttcctatg |
8956486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 8920923 - 8921159
Alignment:
| Q |
1 |
atgtcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtg |
100 |
Q |
| |
|
||||||||||| |||||| || |||| || |||||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||| ||||||| | |
|
|
| T |
8920923 |
atgtcaaaatgtaaaatttgcatgtcacagccttgatgcaaataagcaattccacgtgcaactccaagagatatctcgtacatttgcttataagttaagg |
8921022 |
T |
 |
| Q |
101 |
agattgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaat |
200 |
Q |
| |
|
| || ||| ||||| || ||||||||| |||||||||| ||||| |||||||| ||||||| ||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
8921023 |
aaatgtgatcttctctagaggaaatatatctatcaagagagccatttggcatgaaatcataaacaagagcacgttttgatccctcaacacaaaatccaac |
8921122 |
T |
 |
| Q |
201 |
aagtcgaaccacattggtgtgatgtattcttcctatg |
237 |
Q |
| |
|
|||||| |||||||||| |||||||||| |||||||| |
|
|
| T |
8921123 |
aagtcgcaccacattggcgtgatgtatttttcctatg |
8921159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 8932334 - 8932563
Alignment:
| Q |
7 |
aaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgagattg |
106 |
Q |
| |
|
||||| |||||| || |||| || |||||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||| ||||||| || || |
|
|
| T |
8932334 |
aaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaactccaagagatatctcgtacatttgcttataagttaaggaaatat |
8932433 |
T |
 |
| Q |
107 |
catcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataagtcg |
206 |
Q |
| |
|
|| ||||| || ||||||||| |||||||||| |||||||||||||| ||||||| ||||||||| |||||| ||||| |||||| |||| |||||| |
|
|
| T |
8932434 |
ggtcttctctagaggaaatatatctatcaagagagccattgggcatgaaatcataaacaagagcacgttttgatttctcaacacaaaatccaacaagtcg |
8932533 |
T |
 |
| Q |
207 |
aaccacattggtgtgatgtattcttcctat |
236 |
Q |
| |
|
||||||||||||||||||||| ||||||| |
|
|
| T |
8932534 |
caccacattggtgtgatgtatttttcctat |
8932563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 8942247 - 8942479
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
|||||||| |||||| || |||| || |||||||| ||||||||||| ||||| || || |||| ||||||||||| ||||| || ||||||| || | |
|
|
| T |
8942247 |
tcaaaatgtaaaatttgcatgtcacaaccttgatgcaaataagcaattccacgtgcaacggcaagagatatctcatatatttgtttataagttaaggaaa |
8942346 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| ||| ||||| || || ||||||||||||||||| |||||||||||||| ||||||| |||||| | ||||||| ||||| |||||| |||||||| |
|
|
| T |
8942347 |
tatgatcttctctagatgatatatatttatcaagagagccattgggcatgaaatcataaacaagagctctttttgatccctcaacacaaaatccaataag |
8942446 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctat |
236 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |
|
|
| T |
8942447 |
tcgcaccacattggtgtgatgtattcttcctat |
8942479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 9096571 - 9096494
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaa |
199 |
Q |
| |
|
||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
9096571 |
aaataaatttatcaagagatccattaggcatgaattcataaacaagagcacgttttgatccctcaatacaaaatccaa |
9096494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 9104753 - 9104676
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaa |
199 |
Q |
| |
|
||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
9104753 |
aaataaatttatcaagagatccattaggcatgaattcataaacaagagcacgttttgatccctcaatacaaaatccaa |
9104676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 9486069 - 9485837
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
||||||||||||||| || | | || |||||||| | ||| | ||| ||||||||||||||||| ||||||||||| ||||| | || |||||| || | |
|
|
| T |
9486069 |
tcaaaatgcaaaatttgcataccacagccttgatgaagatatgaaattccacgagccactccaagagatatctcatatatttggtcgttagttagagata |
9485970 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaa-tatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataa |
202 |
Q |
| |
|
| | ||||| ||| |||| ||||||||||||| || |||||||||||| | || |||| ||||||||| || |||| || | |||||| ||||| | |
|
|
| T |
9485969 |
taactccctct-ttgttgaaaatatatttatcaagtgagccattgggcatgtactcgtaaacaagagcacgtttcgatccttcgacacaaaacccaatga |
9485871 |
T |
 |
| Q |
203 |
gtcgaaccacattggtgtgatgtattcttcctat |
236 |
Q |
| |
|
||| |||||||| | |||| |||||||||||| |
|
|
| T |
9485870 |
gtcttaccacatttgaatgatatattcttcctat |
9485837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 8964860 - 8964938
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaat |
200 |
Q |
| |
|
||||| |||||||||| || ||||| | |||||||||||||| ||||||||| ||||||| ||| | |||||||||||| |
|
|
| T |
8964860 |
aaataaatttatcaagggatccattagacatgaattcataaacaagagcacggtttgatccctcgacacaaaaaccaat |
8964938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 9082301 - 9082236
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaa |
187 |
Q |
| |
|
||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| || |||| ||||| |
|
|
| T |
9082301 |
aaataaatttatcaagagatccattaggcatgaattcataaacaagagcacgtttggatccctcaa |
9082236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 9142633 - 9142561
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaa |
194 |
Q |
| |
|
||||| ||||||||||||| ||||| | |||||||||||||| |||||| || ||||||| ||||| |||||| |
|
|
| T |
9142633 |
aaataaatttatcaagagatccatttgacatgaattcataaataagagcgcgttttgatccctcaatacaaaa |
9142561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 9453704 - 9453622
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttg |
86 |
Q |
| |
|
||||||||||||||| || | || || |||||||| | ||| | ||| ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9453704 |
tcaaaatgcaaaatttgcatatcacacccttgatgaagatatgaaattccacgagccactccaagagatatctcatatatttg |
9453622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 9000011 - 9000088
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaa |
199 |
Q |
| |
|
||||| |||||||||| || ||||| |||||||||||||||| ||||||||| || |||| ||| | |||||| |||| |
|
|
| T |
9000011 |
aaataaatttatcaagtgatccattaggcatgaattcataaacaagagcacgtttcgatccctcgatacaaaatccaa |
9000088 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 9056909 - 9057020
Alignment:
| Q |
122 |
aaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataagtcgaaccacattggtgtg |
221 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |||||||||| |||||| || ||||| | ||||| ||||| |||| | | |||||||||| || |
|
|
| T |
9056909 |
aaatatatttatcaagagatccattacgcataaattcataaacaagagctcgttttgacccctcaatgcaaaatccaagtaattgaaccacatttaaatg |
9057008 |
T |
 |
| Q |
222 |
atgtattcttcc |
233 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9057009 |
atgtattcttcc |
9057020 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 10903782 - 10903870
Alignment:
| Q |
127 |
tatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataagtcgaaccacatt |
215 |
Q |
| |
|
||||| ||||| || ||||| |||||||||||||| | |||||||||||||| | || | |||||| ||||||||| | |||||||| |
|
|
| T |
10903782 |
tatttttcaagtgacccatttggcatgaattcatatattagagcacgctttgacccatccacacaaaatccaataagttgtaccacatt |
10903870 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 9159822 - 9160054
Alignment:
| Q |
4 |
tcaaaatgcaaaattagcgtgtcgcatccttgatgtaaataagcaatgccacgagccactccaagtgatatctcatacatttgcttgtaagttagtgaga |
103 |
Q |
| |
|
||||||||||| ||| || |||| ||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||||| | |
|
|
| T |
9159822 |
tcaaaatgcaagatttgcatgtcacatccttgatgcaaataagcaattccacgagccactccaatagatatctcatacattttcttataagttagattaa |
9159921 |
T |
 |
| Q |
104 |
ttgcatcctctcttgaagaaatatatttatcaagagaaccattgggcatgaattcataaaaaagagcacgctttgatcgctcaaaacaaaaaccaataag |
203 |
Q |
| |
|
| |||| ||| | || ||||| |||||||||||||| || ||||||||||||||||||| ||||| || ||||||| ||| | |||||| |||||||| |
|
|
| T |
9159922 |
taacatcatctttagaggaaatgtatttatcaagagagccgttgggcatgaattcataaacaagagtacattttgatctctccacacaaaatccaataag |
9160021 |
T |
 |
| Q |
204 |
tcgaaccacattggtgtgatgtattcttcctat |
236 |
Q |
| |
|
|| |||||||| | || |||||||||||||| |
|
|
| T |
9160022 |
tcttaccacatttgcatggtgtattcttcctat |
9160054 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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